Rroxscaffold_44G00440540

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000044
OG0000098
Physical Location & Seq
Reverse (-)
28796 .. 29986
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_44G00440540.1

Sequence Viewer

Length: 810 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

269

Amino Acids

28.92

Weight (kDa)

10.4

Isoelectric Point (pI)

66.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 762
AccBSI CCGCTC 1 cut(s) 483
AccI GTMKAC 1 cut(s) 410
AccII CGCG 3 cut(s) 473, 492, 738
AccIII TCCGGA 1 cut(s) 698
AclWI GGATC 5 cut(s) 34, 136, 318, 582, 595
AcoI YGGCCR 1 cut(s) 463
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 397, 670
AfiI CCNNNNNNNGG 6 cut(s) 345, 369, 472, 762, 775, 791
AgsI TTSAA 2 cut(s) 419, 708
AjiI CACGTC 1 cut(s) 742
AjnI CCWGG 1 cut(s) 790
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 4 cut(s) 105, 186, 229, 501
AluI AGCT 4 cut(s) 105, 186, 229, 501
Alw21I GWGCWC 2 cut(s) 231, 752
Alw26I GTCTC 1 cut(s) 643
AlwI GGATC 5 cut(s) 34, 136, 318, 582, 595
AlwNI CAGNNNCTG 2 cut(s) 636, 762
Ama87I CYCGRG 4 cut(s) 424, 502, 559, 576
Aor13HI TCCGGA 1 cut(s) 698
AoxI GGCC 3 cut(s) 136, 463, 711
ApeKI GCWGC 2 cut(s) 58, 498
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 724
AspS9I GGNCC 5 cut(s) 336, 540, 693, 711, 765
AsuC2I CCSGG 5 cut(s) 308, 425, 426, 462, 718
AsuHPI GGTGA 2 cut(s) 504, 633
AvaI CYCGRG 4 cut(s) 424, 502, 559, 576
AvaII GGWCC 4 cut(s) 336, 540, 693, 765
BaeGI GKGCMC 2 cut(s) 356, 552
BamHI GGATCC 1 cut(s) 587
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 292
Bbv12I GWGCWC 2 cut(s) 231, 752
BbvI GCAGC 2 cut(s) 45, 510
BceAI ACGGC 1 cut(s) 769
BciT130I CCWGG 1 cut(s) 792
BcnI CCSGG 5 cut(s) 308, 425, 426, 462, 718
BcoDI GTCTC 1 cut(s) 643
BfaI CTAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 719
BisI GCNGC 7 cut(s) 59, 269, 474, 490, 499, 714, 760
BlpI GCTNAGC 1 cut(s) 780
BlsI GCNGC 7 cut(s) 60, 270, 475, 491, 500, 715, 761
Bme1390I CCNGG 6 cut(s) 308, 425, 426, 462, 718, 792
Bme18I GGWCC 4 cut(s) 336, 540, 693, 765
BmeT110I CYCGRG 4 cut(s) 424, 502, 559, 576
BmgBI CACGTC 1 cut(s) 742
BmgT120I GGNCC 5 cut(s) 336, 540, 693, 711, 765
BmiI GGNNCC 5 cut(s) 337, 541, 542, 589, 767
BmrFI CCNGG 6 cut(s) 308, 425, 426, 462, 718, 792
BmrI ACTGGG 2 cut(s) 445, 546
BmsI GCATC 1 cut(s) 646
BmuI ACTGGG 2 cut(s) 445, 546
BpiI GAAGAC 1 cut(s) 292
Bpu1102I GCTNAGC 1 cut(s) 780
BpuMI CCSGG 5 cut(s) 308, 425, 426, 462, 718
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 643
BsaJI CCNNGG 7 cut(s) 424, 460, 490, 577, 644, 717, 791
BsaWI WCCGGW 2 cut(s) 698, 726
BsaXI ACNNNNNCTCC 2 cut(s) 757, 787
Bsc4I CCNNNNNNNGG 6 cut(s) 345, 369, 472, 762, 775, 791
Bse118I RCCGGY 2 cut(s) 465, 674
Bse1I ACTGG 5 cut(s) 69, 169, 399, 451, 541
BseAI TCCGGA 1 cut(s) 698
BseBI CCWGG 1 cut(s) 792
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 424, 460, 490, 577, 644, 717, 791
BseLI CCNNNNNNNGG 6 cut(s) 345, 369, 472, 762, 775, 791
BseMII CTCAG 2 cut(s) 396, 771
BseNI ACTGG 5 cut(s) 69, 169, 399, 451, 541
BseSI GKGCMC 2 cut(s) 356, 552
BseX3I CGGCCG 1 cut(s) 463
BseXI GCAGC 2 cut(s) 45, 510
BseYI CCCAGC 2 cut(s) 273, 551
Bsh1236I CGCG 3 cut(s) 473, 492, 738
Bsh1285I CGRYCG 3 cut(s) 414, 466, 675
BshFI GGCC 3 cut(s) 138, 465, 713
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 3 cut(s) 414, 466, 675
BsiHKAI GWGCWC 2 cut(s) 231, 752
BsiHKCI CYCGRG 4 cut(s) 424, 502, 559, 576
BsiSI CCGG 9 cut(s) 308, 425, 462, 466, 675, 699, 717, 727, 776
BslFI GGGAC 3 cut(s) 443, 547, 553
BslI CCNNNNNNNGG 6 cut(s) 345, 369, 472, 762, 775, 791
BsmAI GTCTC 1 cut(s) 643
BsmFI GGGAC 3 cut(s) 443, 547, 553
BsnI GGCC 3 cut(s) 138, 465, 713
Bso31I GGTCTC 1 cut(s) 643
BsoBI CYCGRG 4 cut(s) 424, 502, 559, 576
Bsp1286I GDGCHC 4 cut(s) 231, 356, 552, 752
Bsp13I TCCGGA 1 cut(s) 698
Bsp143I GATC 4 cut(s) 26, 128, 310, 587
Bsp1720I GCTNAGC 1 cut(s) 780
BspANI GGCC 3 cut(s) 138, 465, 713
BspCNI CTCAG 2 cut(s) 397, 772
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 698
BspFNI CGCG 3 cut(s) 473, 492, 738
BspLI GGNNCC 5 cut(s) 337, 541, 542, 589, 767
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 582, 595
BspQI GCTCTTC 2 cut(s) 4, 757
BspTNI GGTCTC 1 cut(s) 643
BsrBI CCGCTC 1 cut(s) 483
BsrFI RCCGGY 2 cut(s) 465, 674
BsrI ACTGG 5 cut(s) 69, 169, 399, 451, 541
BssAI RCCGGY 2 cut(s) 465, 674
BssECI CCNNGG 7 cut(s) 424, 460, 490, 577, 644, 717, 791
BssMI GATC 4 cut(s) 26, 128, 310, 587
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 644
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 1 cut(s) 792
Bst4CI ACNGT 2 cut(s) 151, 415
Bst6I CTCTTC 2 cut(s) 4, 757
BstC8I GCNNGC 5 cut(s) 318, 328, 467, 471, 802
BstDEI CTNAG 3 cut(s) 235, 405, 780
BstDSI CCRYGG 1 cut(s) 490
BstFNI CGCG 3 cut(s) 473, 492, 738
BstHHI GCGC 1 cut(s) 724
BstKTI GATC 4 cut(s) 29, 131, 313, 590
BstMAI GTCTC 1 cut(s) 643
BstMBI GATC 4 cut(s) 26, 128, 310, 587
BstMCI CGRYCG 3 cut(s) 414, 466, 675
BstNI CCWGG 1 cut(s) 792
BstSCI CCNGG 6 cut(s) 306, 423, 424, 460, 716, 790
BstSLI GKGCMC 2 cut(s) 356, 552
BstUI CGCG 3 cut(s) 473, 492, 738
BstV1I GCAGC 2 cut(s) 45, 510
BstV2I GAAGAC 1 cut(s) 292
BstX2I RGATCY 1 cut(s) 587
BstYI RGATCY 1 cut(s) 587
BstZI CGGCCG 1 cut(s) 463
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 465, 713
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 490
BtrI CACGTC 1 cut(s) 742
BtsI GCAGTG 1 cut(s) 356
BtsIMutI CAGTG 1 cut(s) 356
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 5 cut(s) 318, 328, 467, 471, 802
CaiI CAGNNNCTG 2 cut(s) 636, 762
CfoI GCGC 1 cut(s) 724
Cfr10I RCCGGY 2 cut(s) 465, 674
Cfr13I GGNCC 5 cut(s) 336, 540, 693, 711, 765
Cfr42I CCGCGG 1 cut(s) 493
Cfr9I CCCGGG 1 cut(s) 424
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 396, 669
CviQI GTAC 3 cut(s) 162, 396, 669
DdeI CTNAG 3 cut(s) 235, 405, 780
DpnI GATC 4 cut(s) 28, 130, 312, 589
DpnII GATC 4 cut(s) 26, 128, 310, 587
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 463
EagI CGGCCG 1 cut(s) 463
Eam1104I CTCTTC 2 cut(s) 4, 757
EarI CTCTTC 2 cut(s) 4, 757
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 463
Eco130I CCWWGG 1 cut(s) 644
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 643
Eco47I GGWCC 4 cut(s) 336, 540, 693, 765
Eco52I CGGCCG 1 cut(s) 463
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 424, 502, 559, 576
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 540
EcoRII CCWGG 1 cut(s) 790
EcoT14I CCWWGG 1 cut(s) 644
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 644
FaiI YATR 2 cut(s) 47, 665
FaqI GGGAC 3 cut(s) 443, 547, 553
FauI CCCGC 3 cut(s) 325, 364, 488
FblI GTMKAC 1 cut(s) 410
Fnu4HI GCNGC 7 cut(s) 59, 269, 474, 490, 499, 714, 760
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 7 cut(s) 59, 269, 474, 490, 499, 714, 760
FspBI CTAG 1 cut(s) 102
GlaI GCGC 1 cut(s) 723
GluI GCNGC 7 cut(s) 59, 269, 474, 490, 499, 714, 760
GsaI CCCAGC 2 cut(s) 277, 555
HaeIII GGCC 3 cut(s) 138, 465, 713
HapII CCGG 9 cut(s) 308, 425, 462, 466, 675, 699, 717, 727, 776
HhaI GCGC 1 cut(s) 724
Hin6I GCGC 1 cut(s) 722
HinP1I GCGC 1 cut(s) 722
HincII GTYRAC 1 cut(s) 411
HindII GTYRAC 1 cut(s) 411
HinfI GANTC 4 cut(s) 175, 365, 382, 407
HpaII CCGG 9 cut(s) 308, 425, 462, 466, 675, 699, 717, 727, 776
HphI GGTGA 2 cut(s) 504, 633
Hpy166II GTNNAC 3 cut(s) 411, 512, 641
Hpy188I TCNGA 5 cut(s) 94, 174, 364, 381, 406
Hpy188III TCNNGA 3 cut(s) 532, 576, 699
Hpy8I GTNNAC 3 cut(s) 411, 512, 641
Hpy99I CGWCG 3 cut(s) 44, 527, 743
HpyAV CCTTC 2 cut(s) 17, 433
HpyCH4III ACNGT 2 cut(s) 151, 415
HpyCH4IV ACGT 2 cut(s) 39, 741
HpyF3I CTNAG 3 cut(s) 235, 405, 780
HpySE526I ACGT 2 cut(s) 39, 741
HspAI GCGC 1 cut(s) 722
KflI GGGWCCC 1 cut(s) 540
Kpn2I TCCGGA 1 cut(s) 698
KroI GCCGGC 1 cut(s) 465
KroNI GCCGGC 1 cut(s) 467
KspI CCGCGG 1 cut(s) 493
Kzo9I GATC 4 cut(s) 26, 128, 310, 587
LguI GCTCTTC 2 cut(s) 4, 757
LmnI GCTCC 1 cut(s) 442
Lsp1109I GCAGC 2 cut(s) 45, 510
LweI GCATC 1 cut(s) 646
MaeI CTAG 1 cut(s) 102
MaeII ACGT 2 cut(s) 39, 741
MaeIII GTNAC 2 cut(s) 83, 581
MalI GATC 4 cut(s) 28, 130, 312, 589
MbiI CCGCTC 1 cut(s) 483
MboI GATC 4 cut(s) 26, 128, 310, 587
MboII GAAGA 3 cut(s) 21, 292, 744
MflI RGATCY 1 cut(s) 587
MhlI GDGCHC 4 cut(s) 231, 356, 552, 752
MluCI AATT 1 cut(s) 110
MlyI GAGTC 1 cut(s) 416
MnlI CCTC 8 cut(s) 109, 339, 370, 568, 572, 626, 706, 783
MroI TCCGGA 1 cut(s) 698
MroNI GCCGGC 1 cut(s) 465
MseI TTAA 3 cut(s) 108, 257, 808
MspA1I CMGCKG 2 cut(s) 492, 762
MspI CCGG 9 cut(s) 308, 425, 462, 466, 675, 699, 717, 727, 776
MspR9I CCNGG 6 cut(s) 308, 425, 426, 462, 718, 792
MvaI CCWGG 1 cut(s) 792
MvnI CGCG 3 cut(s) 473, 492, 738
NaeI GCCGGC 1 cut(s) 467
NciI CCSGG 5 cut(s) 308, 425, 426, 462, 718
NdeII GATC 4 cut(s) 26, 128, 310, 587
NgoMIV GCCGGC 1 cut(s) 465
NlaIV GGNNCC 5 cut(s) 337, 541, 542, 589, 767
PaeR7I CTCGAG 2 cut(s) 502, 559
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 757
PdiI GCCGGC 1 cut(s) 467
PfeI GAWTC 3 cut(s) 175, 365, 382
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 762
PkrI GCNGC 7 cut(s) 60, 270, 475, 491, 500, 715, 761
PleI GAGTC 1 cut(s) 415
PpsI GAGTC 1 cut(s) 415
PpuMI RGGWCCY 1 cut(s) 540
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 540
Psp6I CCWGG 1 cut(s) 790
PspFI CCCAGC 2 cut(s) 273, 551
PspGI CCWGG 1 cut(s) 790
PspN4I GGNNCC 5 cut(s) 337, 541, 542, 589, 767
PspPI GGNCC 5 cut(s) 336, 540, 693, 711, 765
PspPPI RGGWCCY 1 cut(s) 540
PspXI VCTCGAGB 2 cut(s) 502, 559
PstNI CAGNNNCTG 2 cut(s) 636, 762
PsuI RGATCY 1 cut(s) 587
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 397, 670
RsaNI GTAC 3 cut(s) 162, 396, 669
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 493
SalI GTCGAC 1 cut(s) 409
SapI GCTCTTC 2 cut(s) 4, 757
SaqAI TTAA 3 cut(s) 108, 257, 808
SatI GCNGC 7 cut(s) 59, 269, 474, 490, 499, 714, 760
Sau3AI GATC 4 cut(s) 26, 128, 310, 587
Sau96I GGNCC 5 cut(s) 336, 540, 693, 711, 765
SchI GAGTC 1 cut(s) 416
ScrFI CCNGG 6 cut(s) 308, 425, 426, 462, 718, 792
SduI GDGCHC 4 cut(s) 231, 356, 552, 752
SfaNI GCATC 1 cut(s) 646
Sfr274I CTCGAG 2 cut(s) 502, 559
Sfr303I CCGCGG 1 cut(s) 493
SgrBI CCGCGG 1 cut(s) 493
SinI GGWCC 4 cut(s) 336, 540, 693, 765
SlaI CTCGAG 2 cut(s) 502, 559
SmaI CCCGGG 1 cut(s) 426
SmlI CTYRAG 2 cut(s) 502, 559
SmoI CTYRAG 2 cut(s) 502, 559
Sse9I AATT 1 cut(s) 110
SspMI CTAG 1 cut(s) 102
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 6 cut(s) 306, 423, 424, 460, 716, 790
StyI CCWWGG 1 cut(s) 644
TaaI ACNGT 2 cut(s) 151, 415
TaiI ACGT 2 cut(s) 42, 744
TaqI TCGA 5 cut(s) 21, 131, 410, 503, 560
TaqII GACCGA 1 cut(s) 681
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 476, 492, 716, 762
TfiI GAWTC 3 cut(s) 175, 365, 382
Tru1I TTAA 3 cut(s) 108, 257, 808
Tru9I TTAA 3 cut(s) 108, 257, 808
TscAI CASTG 1 cut(s) 356
TseI GCWGC 2 cut(s) 58, 498
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 383, 385, 445, 600
TspMI CCCGGG 1 cut(s) 424
TspRI CASTG 1 cut(s) 356
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 762
VpaK11BI GGWCC 4 cut(s) 336, 540, 693, 765
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 502, 559
XmaI CCCGGG 1 cut(s) 424
XmiI GTMKAC 1 cut(s) 410
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.