Rroxscaffold_16G00446240

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000016
OG0000098
Physical Location & Seq
Forward (+)
72957 .. 74144
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_16G00446240.1

Sequence Viewer

Length: 807 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCCACAAGCCAGTTATCCTGTGGTAACTTTTCGACACCTCTAGCTTTAAATTCCAAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCGACAATGTCTTCCGCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGCGGTGCCCGCCTCCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCGGGGAAAGCCCCGAAGGAGCGTTCCCGGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGCGCACGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGGCTGAGCCGTTTCCGGGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

268

Amino Acids

28.63

Weight (kDa)

11.11

Isoelectric Point (pI)

60.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 350
AccB7I CCANNNNNTGG 1 cut(s) 758
AccBSI CCGCTC 1 cut(s) 482
AccI GTMKAC 1 cut(s) 409
AccII CGCG 3 cut(s) 472, 491, 734
AccIII TCCGGA 1 cut(s) 696
AclWI GGATC 5 cut(s) 34, 136, 316, 579, 592
AcoI YGGCCR 1 cut(s) 462
AcsI RAATTY 1 cut(s) 109
AfaI GTAC 3 cut(s) 163, 396, 667
AfiI CCNNNNNNNGG 8 cut(s) 343, 368, 460, 464, 471, 758, 771, 788
AgsI TTSAA 2 cut(s) 418, 706
AjiI CACGTC 1 cut(s) 738
AjuI GAANNNNNNNTTGG 2 cut(s) 313, 345
AluBI AGCT 4 cut(s) 104, 186, 229, 500
AluI AGCT 4 cut(s) 104, 186, 229, 500
Alw21I GWGCWC 2 cut(s) 231, 748
Alw26I GTCTC 1 cut(s) 640
AlwI GGATC 5 cut(s) 34, 136, 316, 579, 592
AlwNI CAGNNNCTG 2 cut(s) 633, 758
Ama87I CYCGRG 3 cut(s) 501, 556, 573
Aor13HI TCCGGA 1 cut(s) 696
AoxI GGCC 3 cut(s) 136, 462, 709
ApeKI GCWGC 2 cut(s) 58, 497
ApoI RAATTY 1 cut(s) 109
AspLEI GCGC 1 cut(s) 721
AspS9I GGNCC 7 cut(s) 334, 451, 533, 539, 691, 709, 761
AsuC2I CCSGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
AsuHPI GGTGA 2 cut(s) 503, 630
AvaI CYCGRG 3 cut(s) 501, 556, 573
AvaII GGWCC 6 cut(s) 334, 451, 533, 539, 691, 761
BaeGI GKGCMC 2 cut(s) 355, 550
BamHI GGATCC 1 cut(s) 584
BanI GGYRCC 1 cut(s) 350
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 2 cut(s) 231, 748
BbvI GCAGC 2 cut(s) 45, 509
BceAI ACGGC 1 cut(s) 766
BcnI CCSGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
BcoDI GTCTC 1 cut(s) 640
BfaI CTAG 1 cut(s) 101
BfuAI ACCTGC 1 cut(s) 252
BisI GCNGC 7 cut(s) 59, 269, 473, 489, 498, 712, 756
BlpI GCTNAGC 1 cut(s) 777
BlsI GCNGC 7 cut(s) 60, 270, 474, 490, 499, 713, 757
Bme1390I CCNGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
Bme18I GGWCC 6 cut(s) 334, 451, 533, 539, 691, 761
BmeT110I CYCGRG 3 cut(s) 501, 556, 573
BmgBI CACGTC 1 cut(s) 738
BmgT120I GGNCC 7 cut(s) 334, 451, 533, 539, 691, 709, 761
BmiI GGNNCC 7 cut(s) 335, 352, 534, 540, 541, 586, 763
BmrFI CCNGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
BmsI GCATC 1 cut(s) 643
BpiI GAAGAC 1 cut(s) 291
Bpu1102I GCTNAGC 1 cut(s) 777
BpuMI CCSGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 640
BsaJI CCNNGG 6 cut(s) 423, 459, 489, 574, 641, 788
BsaWI WCCGGW 1 cut(s) 696
BsaXI ACNNNNNCTCC 2 cut(s) 753, 783
Bsc4I CCNNNNNNNGG 8 cut(s) 343, 368, 460, 464, 471, 758, 771, 788
Bse118I RCCGGY 1 cut(s) 464
Bse1I ACTGG 3 cut(s) 70, 169, 398
BseAI TCCGGA 1 cut(s) 696
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 6 cut(s) 423, 459, 489, 574, 641, 788
BseLI CCNNNNNNNGG 8 cut(s) 343, 368, 460, 464, 471, 758, 771, 788
BseMII CTCAG 2 cut(s) 395, 768
BseNI ACTGG 3 cut(s) 70, 169, 398
BseSI GKGCMC 2 cut(s) 355, 550
BseX3I CGGCCG 1 cut(s) 462
BseXI GCAGC 2 cut(s) 45, 509
BseYI CCCAGC 2 cut(s) 273, 549
Bsh1236I CGCG 3 cut(s) 472, 491, 734
Bsh1285I CGRYCG 2 cut(s) 465, 672
BshFI GGCC 3 cut(s) 138, 464, 711
BshNI GGYRCC 1 cut(s) 350
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 465, 672
BsiHKAI GWGCWC 2 cut(s) 231, 748
BsiHKCI CYCGRG 3 cut(s) 501, 556, 573
BslFI GGGAC 3 cut(s) 441, 546, 552
BslI CCNNNNNNNGG 8 cut(s) 343, 368, 460, 464, 471, 758, 771, 788
BsmAI GTCTC 1 cut(s) 640
BsmFI GGGAC 3 cut(s) 441, 546, 552
BsnI GGCC 3 cut(s) 138, 464, 711
Bso31I GGTCTC 1 cut(s) 640
BsoBI CYCGRG 3 cut(s) 501, 556, 573
Bsp1286I GDGCHC 4 cut(s) 231, 355, 550, 748
Bsp13I TCCGGA 1 cut(s) 696
Bsp143I GATC 4 cut(s) 26, 128, 308, 584
Bsp1720I GCTNAGC 1 cut(s) 777
BspANI GGCC 3 cut(s) 138, 464, 711
BspCNI CTCAG 2 cut(s) 396, 769
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 696
BspFNI CGCG 3 cut(s) 472, 491, 734
BspLI GGNNCC 7 cut(s) 335, 352, 534, 540, 541, 586, 763
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 316, 579, 592
BspQI GCTCTTC 2 cut(s) 4, 753
BspT107I GGYRCC 1 cut(s) 350
BspTNI GGTCTC 1 cut(s) 640
BsrBI CCGCTC 1 cut(s) 482
BsrFI RCCGGY 1 cut(s) 464
BsrI ACTGG 3 cut(s) 70, 169, 398
BssAI RCCGGY 1 cut(s) 464
BssECI CCNNGG 6 cut(s) 423, 459, 489, 574, 641, 788
BssMI GATC 4 cut(s) 26, 128, 308, 584
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 641
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 2 cut(s) 151, 414
Bst6I CTCTTC 2 cut(s) 4, 753
BstC8I GCNNGC 6 cut(s) 316, 326, 355, 466, 470, 799
BstDEI CTNAG 3 cut(s) 235, 404, 777
BstDSI CCRYGG 1 cut(s) 489
BstFNI CGCG 3 cut(s) 472, 491, 734
BstHHI GCGC 1 cut(s) 721
BstKTI GATC 4 cut(s) 29, 131, 311, 587
BstMAI GTCTC 1 cut(s) 640
BstMBI GATC 4 cut(s) 26, 128, 308, 584
BstMCI CGRYCG 2 cut(s) 465, 672
BstSCI CCNGG 8 cut(s) 422, 447, 459, 535, 671, 714, 771, 787
BstSLI GKGCMC 2 cut(s) 355, 550
BstUI CGCG 3 cut(s) 472, 491, 734
BstV1I GCAGC 2 cut(s) 45, 509
BstV2I GAAGAC 1 cut(s) 291
BstX2I RGATCY 1 cut(s) 584
BstYI RGATCY 1 cut(s) 584
BstZI CGGCCG 1 cut(s) 462
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 464, 711
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 489
BtrI CACGTC 1 cut(s) 738
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 6 cut(s) 316, 326, 355, 466, 470, 799
CaiI CAGNNNCTG 2 cut(s) 633, 758
CfoI GCGC 1 cut(s) 721
Cfr10I RCCGGY 1 cut(s) 464
Cfr13I GGNCC 7 cut(s) 334, 451, 533, 539, 691, 709, 761
Cfr42I CCGCGG 1 cut(s) 492
ClaI ATCGAT 1 cut(s) 131
CpoI CGGWCCG 1 cut(s) 451
Csp6I GTAC 3 cut(s) 162, 395, 666
CspI CGGWCCG 1 cut(s) 451
CviQI GTAC 3 cut(s) 162, 395, 666
DdeI CTNAG 3 cut(s) 235, 404, 777
DpnI GATC 4 cut(s) 28, 130, 310, 586
DpnII GATC 4 cut(s) 26, 128, 308, 584
DraI TTTAAA 1 cut(s) 108
EaeI YGGCCR 1 cut(s) 462
EagI CGGCCG 1 cut(s) 462
Eam1104I CTCTTC 2 cut(s) 4, 753
EarI CTCTTC 2 cut(s) 4, 753
EciI GGCGGA 1 cut(s) 292
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 462
Eco130I CCWWGG 1 cut(s) 641
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 640
Eco47I GGWCC 6 cut(s) 334, 451, 533, 539, 691, 761
Eco52I CGGCCG 1 cut(s) 462
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 3 cut(s) 501, 556, 573
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 539
EcoT14I CCWWGG 1 cut(s) 641
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 641
FaiI YATR 2 cut(s) 47, 662
FaqI GGGAC 3 cut(s) 441, 546, 552
FauI CCCGC 3 cut(s) 323, 362, 487
FblI GTMKAC 1 cut(s) 409
Fnu4HI GCNGC 7 cut(s) 59, 269, 473, 489, 498, 712, 756
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 7 cut(s) 59, 269, 473, 489, 498, 712, 756
FspBI CTAG 1 cut(s) 101
GlaI GCGC 1 cut(s) 720
GluI GCNGC 7 cut(s) 59, 269, 473, 489, 498, 712, 756
GsaI CCCAGC 2 cut(s) 277, 553
HaeIII GGCC 3 cut(s) 138, 464, 711
HhaI GCGC 1 cut(s) 721
Hin6I GCGC 1 cut(s) 719
HinP1I GCGC 1 cut(s) 719
HincII GTYRAC 1 cut(s) 410
HindII GTYRAC 1 cut(s) 410
HinfI GANTC 4 cut(s) 175, 364, 381, 406
HphI GGTGA 2 cut(s) 503, 630
Hpy166II GTNNAC 3 cut(s) 410, 511, 638
Hpy188I TCNGA 3 cut(s) 174, 380, 405
Hpy188III TCNNGA 4 cut(s) 361, 531, 573, 697
Hpy8I GTNNAC 3 cut(s) 410, 511, 638
Hpy99I CGWCG 3 cut(s) 44, 526, 739
HpyAV CCTTC 2 cut(s) 17, 431
HpyCH4III ACNGT 2 cut(s) 151, 414
HpyCH4IV ACGT 2 cut(s) 39, 737
HpyF3I CTNAG 3 cut(s) 235, 404, 777
HpySE526I ACGT 2 cut(s) 39, 737
HspAI GCGC 1 cut(s) 719
KflI GGGWCCC 1 cut(s) 539
Kpn2I TCCGGA 1 cut(s) 696
KroI GCCGGC 1 cut(s) 464
KroNI GCCGGC 1 cut(s) 466
KspI CCGCGG 1 cut(s) 492
Kzo9I GATC 4 cut(s) 26, 128, 308, 584
LguI GCTCTTC 2 cut(s) 4, 753
LmnI GCTCC 1 cut(s) 440
Lsp1109I GCAGC 2 cut(s) 45, 509
LweI GCATC 1 cut(s) 643
MaeI CTAG 1 cut(s) 101
MaeII ACGT 2 cut(s) 39, 737
MaeIII GTNAC 2 cut(s) 83, 578
MalI GATC 4 cut(s) 28, 130, 310, 586
MbiI CCGCTC 1 cut(s) 482
MboI GATC 4 cut(s) 26, 128, 308, 584
MboII GAAGA 3 cut(s) 21, 291, 740
MflI RGATCY 1 cut(s) 584
MhlI GDGCHC 4 cut(s) 231, 355, 550, 748
MluCI AATT 1 cut(s) 109
MlyI GAGTC 1 cut(s) 415
MnlI CCTC 8 cut(s) 108, 337, 368, 565, 569, 623, 704, 779
MroI TCCGGA 1 cut(s) 696
MroNI GCCGGC 1 cut(s) 464
MseI TTAA 3 cut(s) 107, 257, 805
MspA1I CMGCKG 2 cut(s) 491, 758
MspR9I CCNGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
MvnI CGCG 3 cut(s) 472, 491, 734
NaeI GCCGGC 1 cut(s) 466
NciI CCSGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
NdeII GATC 4 cut(s) 26, 128, 308, 584
NgoMIV GCCGGC 1 cut(s) 464
NlaIV GGNNCC 7 cut(s) 335, 352, 534, 540, 541, 586, 763
PaeR7I CTCGAG 2 cut(s) 501, 556
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 753
PdiI GCCGGC 1 cut(s) 466
PfeI GAWTC 3 cut(s) 175, 364, 381
PflFI GACNNNGTC 1 cut(s) 295
PflMI CCANNNNNTGG 1 cut(s) 758
PkrI GCNGC 7 cut(s) 60, 270, 474, 490, 499, 713, 757
PleI GAGTC 1 cut(s) 414
PpsI GAGTC 1 cut(s) 414
PpuMI RGGWCCY 1 cut(s) 539
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 539
PspFI CCCAGC 2 cut(s) 273, 549
PspN4I GGNNCC 7 cut(s) 335, 352, 534, 540, 541, 586, 763
PspPI GGNCC 7 cut(s) 334, 451, 533, 539, 691, 709, 761
PspPPI RGGWCCY 1 cut(s) 539
PspXI VCTCGAGB 2 cut(s) 501, 556
PstNI CAGNNNCTG 2 cut(s) 633, 758
PsuI RGATCY 1 cut(s) 584
PsyI GACNNNGTC 1 cut(s) 295
RsaI GTAC 3 cut(s) 163, 396, 667
RsaNI GTAC 3 cut(s) 162, 395, 666
Rsr2I CGGWCCG 1 cut(s) 451
RsrII CGGWCCG 1 cut(s) 451
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 492
SalI GTCGAC 1 cut(s) 408
SapI GCTCTTC 2 cut(s) 4, 753
SaqAI TTAA 3 cut(s) 107, 257, 805
SatI GCNGC 7 cut(s) 59, 269, 473, 489, 498, 712, 756
Sau3AI GATC 4 cut(s) 26, 128, 308, 584
Sau96I GGNCC 7 cut(s) 334, 451, 533, 539, 691, 709, 761
SchI GAGTC 1 cut(s) 415
ScrFI CCNGG 8 cut(s) 424, 449, 461, 537, 673, 716, 773, 789
SduI GDGCHC 4 cut(s) 231, 355, 550, 748
SfaNI GCATC 1 cut(s) 643
Sfr274I CTCGAG 2 cut(s) 501, 556
Sfr303I CCGCGG 1 cut(s) 492
SgrBI CCGCGG 1 cut(s) 492
SinI GGWCC 6 cut(s) 334, 451, 533, 539, 691, 761
SlaI CTCGAG 2 cut(s) 501, 556
SmlI CTYRAG 2 cut(s) 501, 556
SmoI CTYRAG 2 cut(s) 501, 556
Sse9I AATT 1 cut(s) 109
SspMI CTAG 1 cut(s) 101
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 8 cut(s) 422, 447, 459, 535, 671, 714, 771, 787
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 2 cut(s) 151, 414
TaiI ACGT 2 cut(s) 42, 740
TaqI TCGA 6 cut(s) 21, 92, 131, 409, 502, 557
TaqII GACCGA 1 cut(s) 679
TasI AATT 1 cut(s) 109
TauI GCSGC 5 cut(s) 271, 475, 491, 714, 758
TfiI GAWTC 3 cut(s) 175, 364, 381
Tru1I TTAA 3 cut(s) 107, 257, 805
Tru9I TTAA 3 cut(s) 107, 257, 805
TseI GCWGC 2 cut(s) 58, 497
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 5 cut(s) 382, 384, 443, 597, 738
Tth111I GACNNNGTC 1 cut(s) 295
Van91I CCANNNNNTGG 1 cut(s) 758
VpaK11BI GGWCC 6 cut(s) 334, 451, 533, 539, 691, 761
XapI RAATTY 1 cut(s) 109
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XhoI CTCGAG 2 cut(s) 501, 556
XmiI GTMKAC 1 cut(s) 409
XspI CTAG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.