Rroxscaffold_33G00439760

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000033
OG0000098
Physical Location & Seq
Forward (+)
86518 .. 87681
1164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_33G00439760.1

Sequence Viewer

Length: 963 bp
ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

320

Amino Acids

35.29

Weight (kDa)

10.84

Isoelectric Point (pI)

54.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 207
Acc36I ACCTGC 1 cut(s) 207
AccB7I CCANNNNNTGG 1 cut(s) 902
AccBSI CCGCTC 1 cut(s) 622
AccI GTMKAC 2 cut(s) 505, 548
AccII CGCG 3 cut(s) 612, 631, 878
AccIII TCCGGA 1 cut(s) 837
AclI AACGTT 1 cut(s) 344
AclWI GGATC 4 cut(s) 91, 273, 720, 733
AcoI YGGCCR 1 cut(s) 602
AcsI RAATTY 1 cut(s) 65
AfaI GTAC 3 cut(s) 118, 535, 808
AfiI CCNNNNNNNGG 8 cut(s) 300, 326, 600, 604, 611, 902, 915, 931
AgsI TTSAA 2 cut(s) 557, 847
AjiI CACGTC 1 cut(s) 882
AjnI CCWGG 1 cut(s) 930
AjuI GAANNNNNNNTTGG 2 cut(s) 270, 302
AluBI AGCT 5 cut(s) 60, 141, 184, 435, 640
AluI AGCT 5 cut(s) 60, 141, 184, 435, 640
Alw21I GWGCWC 2 cut(s) 186, 892
Alw26I GTCTC 1 cut(s) 781
AlwI GGATC 4 cut(s) 91, 273, 720, 733
AlwNI CAGNNNCTG 2 cut(s) 774, 902
Ama87I CYCGRG 4 cut(s) 562, 641, 697, 714
Aor13HI TCCGGA 1 cut(s) 837
AoxI GGCC 3 cut(s) 91, 602, 850
ApeKI GCWGC 2 cut(s) 13, 637
ApoI RAATTY 1 cut(s) 65
AspLEI GCGC 1 cut(s) 864
AspS9I GGNCC 5 cut(s) 291, 679, 832, 850, 905
AsuC2I CCSGG 6 cut(s) 263, 563, 564, 601, 814, 857
AsuHPI GGTGA 2 cut(s) 643, 771
AvaI CYCGRG 4 cut(s) 562, 641, 697, 714
AvaII GGWCC 4 cut(s) 291, 679, 832, 905
BaeGI GKGCMC 2 cut(s) 313, 691
BamHI GGATCC 1 cut(s) 725
BanII GRGCYC 1 cut(s) 186
BauI CACGAG 1 cut(s) 161
BbsI GAAGAC 2 cut(s) 247, 438
Bbv12I GWGCWC 2 cut(s) 186, 892
BbvI GCAGC 1 cut(s) 649
BceAI ACGGC 1 cut(s) 909
BciT130I CCWGG 1 cut(s) 932
BcnI CCSGG 6 cut(s) 263, 563, 564, 601, 814, 857
BcoDI GTCTC 1 cut(s) 781
BfaI CTAG 2 cut(s) 57, 425
BfuAI ACCTGC 1 cut(s) 207
BisI GCNGC 7 cut(s) 14, 224, 613, 629, 638, 853, 900
BlpI GCTNAGC 1 cut(s) 920
BlsI GCNGC 7 cut(s) 15, 225, 614, 630, 639, 854, 901
Bme1390I CCNGG 7 cut(s) 263, 563, 564, 601, 814, 857, 932
Bme18I GGWCC 4 cut(s) 291, 679, 832, 905
BmeT110I CYCGRG 4 cut(s) 562, 641, 697, 714
BmgBI CACGTC 1 cut(s) 882
BmgT120I GGNCC 5 cut(s) 291, 679, 832, 850, 905
BmiI GGNNCC 6 cut(s) 292, 381, 680, 681, 727, 907
BmrFI CCNGG 7 cut(s) 263, 563, 564, 601, 814, 857, 932
BmrI ACTGGG 2 cut(s) 583, 685
BmsI GCATC 1 cut(s) 784
BmuI ACTGGG 2 cut(s) 583, 685
BoxI GACNNNNGTC 1 cut(s) 427
BpiI GAAGAC 2 cut(s) 247, 438
BplI GAGNNNNNCTC 2 cut(s) 419, 451
Bpu1102I GCTNAGC 1 cut(s) 920
BpuEI CTTGAG 1 cut(s) 386
BpuMI CCSGG 6 cut(s) 263, 563, 564, 601, 814, 857
Bsa29I ATCGAT 1 cut(s) 86
BsaI GGTCTC 1 cut(s) 781
BsaJI CCNNGG 8 cut(s) 480, 562, 599, 629, 715, 782, 856, 931
BsaWI WCCGGW 2 cut(s) 837, 866
BsaXI ACNNNNNCTCC 2 cut(s) 897, 927
Bsc4I CCNNNNNNNGG 8 cut(s) 300, 326, 600, 604, 611, 902, 915, 931
Bse118I RCCGGY 1 cut(s) 604
Bse1I ACTGG 5 cut(s) 24, 124, 537, 589, 680
BseAI TCCGGA 1 cut(s) 837
BseBI CCWGG 1 cut(s) 932
BseCI ATCGAT 1 cut(s) 86
BseDI CCNNGG 8 cut(s) 480, 562, 599, 629, 715, 782, 856, 931
BseLI CCNNNNNNNGG 8 cut(s) 300, 326, 600, 604, 611, 902, 915, 931
BseMII CTCAG 2 cut(s) 534, 911
BseNI ACTGG 5 cut(s) 24, 124, 537, 589, 680
BseSI GKGCMC 2 cut(s) 313, 691
BseX3I CGGCCG 1 cut(s) 602
BseXI GCAGC 1 cut(s) 649
BseYI CCCAGC 2 cut(s) 228, 690
Bsh1236I CGCG 3 cut(s) 612, 631, 878
Bsh1285I CGRYCG 2 cut(s) 605, 813
BshFI GGCC 3 cut(s) 93, 604, 852
BshVI ATCGAT 1 cut(s) 86
BsiEI CGRYCG 2 cut(s) 605, 813
BsiHKAI GWGCWC 2 cut(s) 186, 892
BsiHKCI CYCGRG 4 cut(s) 562, 641, 697, 714
BsiSI CCGG 9 cut(s) 263, 563, 601, 605, 813, 838, 856, 867, 916
BslFI GGGAC 4 cut(s) 525, 581, 686, 692
BslI CCNNNNNNNGG 8 cut(s) 300, 326, 600, 604, 611, 902, 915, 931
BsmAI GTCTC 1 cut(s) 781
BsmFI GGGAC 4 cut(s) 525, 581, 686, 692
BsnI GGCC 3 cut(s) 93, 604, 852
Bso31I GGTCTC 1 cut(s) 781
BsoBI CYCGRG 4 cut(s) 562, 641, 697, 714
Bsp1286I GDGCHC 4 cut(s) 186, 313, 691, 892
Bsp13I TCCGGA 1 cut(s) 837
Bsp143I GATC 3 cut(s) 83, 265, 725
Bsp1720I GCTNAGC 1 cut(s) 920
BspANI GGCC 3 cut(s) 93, 604, 852
BspCNI CTCAG 2 cut(s) 535, 912
BspDI ATCGAT 1 cut(s) 86
BspEI TCCGGA 1 cut(s) 837
BspFNI CGCG 3 cut(s) 612, 631, 878
BspLI GGNNCC 6 cut(s) 292, 381, 680, 681, 727, 907
BspMI ACCTGC 1 cut(s) 207
BspPI GGATC 4 cut(s) 91, 273, 720, 733
BspQI GCTCTTC 1 cut(s) 897
BspTNI GGTCTC 1 cut(s) 781
BsrBI CCGCTC 1 cut(s) 622
BsrFI RCCGGY 1 cut(s) 604
BsrI ACTGG 5 cut(s) 24, 124, 537, 589, 680
BssAI RCCGGY 1 cut(s) 604
BssECI CCNNGG 8 cut(s) 480, 562, 599, 629, 715, 782, 856, 931
BssMI GATC 3 cut(s) 83, 265, 725
BssSI CACGAG 1 cut(s) 161
BssT1I CCWWGG 2 cut(s) 480, 782
Bst2BI CACGAG 1 cut(s) 161
Bst2UI CCWGG 1 cut(s) 932
Bst4CI ACNGT 2 cut(s) 106, 553
Bst6I CTCTTC 1 cut(s) 897
BstC8I GCNNGC 5 cut(s) 273, 283, 606, 610, 942
BstDEI CTNAG 3 cut(s) 190, 543, 920
BstDSI CCRYGG 1 cut(s) 629
BstFNI CGCG 3 cut(s) 612, 631, 878
BstHHI GCGC 1 cut(s) 864
BstKTI GATC 3 cut(s) 86, 268, 728
BstMAI GTCTC 1 cut(s) 781
BstMBI GATC 3 cut(s) 83, 265, 725
BstMCI CGRYCG 2 cut(s) 605, 813
BstMWI GCNNNNNNNGC 9 cut(s) 229, 464, 628, 634, 637, 643, 823, 861, 896
BstNI CCWGG 1 cut(s) 932
BstPAI GACNNNNGTC 1 cut(s) 427
BstSCI CCNGG 7 cut(s) 261, 561, 562, 599, 812, 855, 930
BstSLI GKGCMC 2 cut(s) 313, 691
BstUI CGCG 3 cut(s) 612, 631, 878
BstV1I GCAGC 1 cut(s) 649
BstV2I GAAGAC 2 cut(s) 247, 438
BstX2I RGATCY 1 cut(s) 725
BstYI RGATCY 1 cut(s) 725
BstZI CGGCCG 1 cut(s) 602
Bsu15I ATCGAT 1 cut(s) 86
BsuRI GGCC 3 cut(s) 93, 604, 852
BsuTUI ATCGAT 1 cut(s) 86
BtgI CCRYGG 1 cut(s) 629
BtrI CACGTC 1 cut(s) 882
BtsI GCAGTG 1 cut(s) 313
BtsIMutI CAGTG 1 cut(s) 313
BveI ACCTGC 1 cut(s) 207
Cac8I GCNNGC 5 cut(s) 273, 283, 606, 610, 942
CaiI CAGNNNCTG 2 cut(s) 774, 902
CfoI GCGC 1 cut(s) 864
Cfr10I RCCGGY 1 cut(s) 604
Cfr13I GGNCC 5 cut(s) 291, 679, 832, 850, 905
Cfr42I CCGCGG 1 cut(s) 632
Cfr9I CCCGGG 1 cut(s) 562
ClaI ATCGAT 1 cut(s) 86
Csp6I GTAC 3 cut(s) 117, 534, 807
CviQI GTAC 3 cut(s) 117, 534, 807
DdeI CTNAG 3 cut(s) 190, 543, 920
DpnI GATC 3 cut(s) 85, 267, 727
DpnII GATC 3 cut(s) 83, 265, 725
DraI TTTAAA 1 cut(s) 64
EaeI YGGCCR 1 cut(s) 602
EagI CGGCCG 1 cut(s) 602
Eam1104I CTCTTC 1 cut(s) 897
EarI CTCTTC 1 cut(s) 897
EciI GGCGGA 1 cut(s) 248
Ecl136II GAGCTC 1 cut(s) 184
EclXI CGGCCG 1 cut(s) 602
Eco130I CCWWGG 2 cut(s) 480, 782
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 1 cut(s) 781
Eco47I GGWCC 4 cut(s) 291, 679, 832, 905
Eco52I CGGCCG 1 cut(s) 602
Eco53kI GAGCTC 1 cut(s) 184
Eco88I CYCGRG 4 cut(s) 562, 641, 697, 714
EcoICRI GAGCTC 1 cut(s) 184
EcoO109I RGGNCCY 1 cut(s) 679
EcoRII CCWGG 1 cut(s) 930
EcoT14I CCWWGG 2 cut(s) 480, 782
EcoT38I GRGCYC 1 cut(s) 186
ErhI CCWWGG 2 cut(s) 480, 782
FaiI YATR 2 cut(s) 390, 803
FaqI GGGAC 4 cut(s) 525, 581, 686, 692
FauI CCCGC 4 cut(s) 280, 321, 463, 627
FblI GTMKAC 2 cut(s) 505, 548
Fnu4HI GCNGC 7 cut(s) 14, 224, 613, 629, 638, 853, 900
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 7 cut(s) 14, 224, 613, 629, 638, 853, 900
FspBI CTAG 2 cut(s) 57, 425
GlaI GCGC 1 cut(s) 863
GluI GCNGC 7 cut(s) 14, 224, 613, 629, 638, 853, 900
GsaI CCCAGC 2 cut(s) 232, 694
HaeIII GGCC 3 cut(s) 93, 604, 852
HapII CCGG 9 cut(s) 263, 563, 601, 605, 813, 838, 856, 867, 916
HhaI GCGC 1 cut(s) 864
Hin6I GCGC 1 cut(s) 862
HinP1I GCGC 1 cut(s) 862
HincII GTYRAC 1 cut(s) 549
HindII GTYRAC 1 cut(s) 549
HinfI GANTC 6 cut(s) 130, 322, 428, 461, 520, 545
HpaII CCGG 9 cut(s) 263, 563, 601, 605, 813, 838, 856, 867, 916
HphI GGTGA 2 cut(s) 643, 771
Hpy166II GTNNAC 4 cut(s) 506, 549, 651, 779
Hpy188I TCNGA 6 cut(s) 49, 129, 321, 422, 519, 544
Hpy188III TCNNGA 3 cut(s) 671, 714, 838
Hpy8I GTNNAC 4 cut(s) 506, 549, 651, 779
Hpy99I CGWCG 2 cut(s) 666, 883
HpyAV CCTTC 2 cut(s) 370, 571
HpyCH4III ACNGT 2 cut(s) 106, 553
HpyCH4IV ACGT 2 cut(s) 344, 881
HpyF10VI GCNNNNNNNGC 9 cut(s) 229, 464, 628, 634, 637, 643, 823, 861, 896
HpyF3I CTNAG 3 cut(s) 190, 543, 920
HpySE526I ACGT 2 cut(s) 344, 881
HspAI GCGC 1 cut(s) 862
KflI GGGWCCC 1 cut(s) 679
Kpn2I TCCGGA 1 cut(s) 837
KroI GCCGGC 1 cut(s) 604
KroNI GCCGGC 1 cut(s) 606
KspI CCGCGG 1 cut(s) 632
Kzo9I GATC 3 cut(s) 83, 265, 725
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 2 cut(s) 385, 580
Lsp1109I GCAGC 1 cut(s) 649
LweI GCATC 1 cut(s) 784
MaeI CTAG 2 cut(s) 57, 425
MaeII ACGT 2 cut(s) 344, 881
MaeIII GTNAC 2 cut(s) 38, 719
MalI GATC 3 cut(s) 85, 267, 727
MbiI CCGCTC 1 cut(s) 622
MboI GATC 3 cut(s) 83, 265, 725
MboII GAAGA 3 cut(s) 247, 438, 884
MflI RGATCY 1 cut(s) 725
MhlI GDGCHC 4 cut(s) 186, 313, 691, 892
MluCI AATT 1 cut(s) 65
MlyI GAGTC 2 cut(s) 437, 554
MmeI TCCRAC 1 cut(s) 400
MnlI CCTC 9 cut(s) 64, 294, 327, 408, 706, 710, 764, 845, 923
MroI TCCGGA 1 cut(s) 837
MroNI GCCGGC 1 cut(s) 604
MseI TTAA 4 cut(s) 63, 212, 347, 948
MspA1I CMGCKG 3 cut(s) 458, 631, 902
MspI CCGG 9 cut(s) 263, 563, 601, 605, 813, 838, 856, 867, 916
MspR9I CCNGG 7 cut(s) 263, 563, 564, 601, 814, 857, 932
MvaI CCWGG 1 cut(s) 932
MvnI CGCG 3 cut(s) 612, 631, 878
MwoI GCNNNNNNNGC 9 cut(s) 229, 464, 628, 634, 637, 643, 823, 861, 896
NaeI GCCGGC 1 cut(s) 606
NciI CCSGG 6 cut(s) 263, 563, 564, 601, 814, 857
NdeII GATC 3 cut(s) 83, 265, 725
NgoMIV GCCGGC 1 cut(s) 604
NlaIV GGNNCC 6 cut(s) 292, 381, 680, 681, 727, 907
PaeR7I CTCGAG 2 cut(s) 641, 697
PaqCI CACCTGC 1 cut(s) 207
PciSI GCTCTTC 1 cut(s) 897
PdiI GCCGGC 1 cut(s) 606
PfeI GAWTC 4 cut(s) 130, 322, 461, 520
PflFI GACNNNGTC 1 cut(s) 251
PflMI CCANNNNNTGG 1 cut(s) 902
PkrI GCNGC 7 cut(s) 15, 225, 614, 630, 639, 854, 901
PleI GAGTC 2 cut(s) 436, 553
PpsI GAGTC 2 cut(s) 436, 553
PpuMI RGGWCCY 1 cut(s) 679
PshAI GACNNNNGTC 1 cut(s) 427
Psp124BI GAGCTC 1 cut(s) 186
Psp1406I AACGTT 1 cut(s) 344
Psp5II RGGWCCY 1 cut(s) 679
Psp6I CCWGG 1 cut(s) 930
PspFI CCCAGC 2 cut(s) 228, 690
PspGI CCWGG 1 cut(s) 930
PspN4I GGNNCC 6 cut(s) 292, 381, 680, 681, 727, 907
PspPI GGNCC 5 cut(s) 291, 679, 832, 850, 905
PspPPI RGGWCCY 1 cut(s) 679
PspXI VCTCGAGB 2 cut(s) 641, 697
PstNI CAGNNNCTG 2 cut(s) 774, 902
PsuI RGATCY 1 cut(s) 725
PsyI GACNNNGTC 1 cut(s) 251
RsaI GTAC 3 cut(s) 118, 535, 808
RsaNI GTAC 3 cut(s) 117, 534, 807
SacI GAGCTC 1 cut(s) 186
SacII CCGCGG 1 cut(s) 632
SalI GTCGAC 1 cut(s) 547
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 4 cut(s) 63, 212, 347, 948
SatI GCNGC 7 cut(s) 14, 224, 613, 629, 638, 853, 900
Sau3AI GATC 3 cut(s) 83, 265, 725
Sau96I GGNCC 5 cut(s) 291, 679, 832, 850, 905
SchI GAGTC 2 cut(s) 437, 554
ScrFI CCNGG 7 cut(s) 263, 563, 564, 601, 814, 857, 932
SduI GDGCHC 4 cut(s) 186, 313, 691, 892
SfaNI GCATC 1 cut(s) 784
Sfr274I CTCGAG 2 cut(s) 641, 697
Sfr303I CCGCGG 1 cut(s) 632
SgrBI CCGCGG 1 cut(s) 632
SinI GGWCC 4 cut(s) 291, 679, 832, 905
SlaI CTCGAG 2 cut(s) 641, 697
SmaI CCCGGG 1 cut(s) 564
SmlI CTYRAG 3 cut(s) 401, 641, 697
SmoI CTYRAG 3 cut(s) 401, 641, 697
Sse9I AATT 1 cut(s) 65
SspMI CTAG 2 cut(s) 57, 425
SstI GAGCTC 1 cut(s) 186
StyD4I CCNGG 7 cut(s) 261, 561, 562, 599, 812, 855, 930
StyI CCWWGG 2 cut(s) 480, 782
TaaI ACNGT 2 cut(s) 106, 553
TaiI ACGT 2 cut(s) 347, 884
TaqI TCGA 4 cut(s) 86, 548, 642, 698
TaqII GACCGA 1 cut(s) 820
TasI AATT 1 cut(s) 65
TauI GCSGC 5 cut(s) 226, 615, 631, 855, 902
TfiI GAWTC 4 cut(s) 130, 322, 461, 520
Tru1I TTAA 4 cut(s) 63, 212, 347, 948
Tru9I TTAA 4 cut(s) 63, 212, 347, 948
TscAI CASTG 1 cut(s) 313
TseI GCWGC 2 cut(s) 13, 637
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 4 cut(s) 342, 521, 583, 738
TspMI CCCGGG 1 cut(s) 562
TspRI CASTG 1 cut(s) 313
Tth111I GACNNNGTC 1 cut(s) 251
Van91I CCANNNNNTGG 1 cut(s) 902
VpaK11BI GGWCC 4 cut(s) 291, 679, 832, 905
XapI RAATTY 1 cut(s) 65
XhoI CTCGAG 2 cut(s) 641, 697
XmaI CCCGGG 1 cut(s) 562
XmiI GTMKAC 2 cut(s) 505, 548
XspI CTAG 2 cut(s) 57, 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.