Rroxscaffold_41G00451130

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000041
OG0000098
Physical Location & Seq
Reverse (-)
15502 .. 16553
1052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_41G00451130.1

Sequence Viewer

Length: 672 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGGCTGGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCGTCCGTCCCCCGGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGATCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCGTTCACCTTGGAGACCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGCCGAGCCGTTTCCAGTGGTGGGCAGGTCGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGGAATTTTAACCCGATTCCCTTTCGAAGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGCCTCTTAGGATCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

223

Amino Acids

24.37

Weight (kDa)

10.78

Isoelectric Point (pI)

77.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 549
Acc36I ACCTGC 1 cut(s) 492
AccBSI CCGCTC 1 cut(s) 186
AccI GTMKAC 1 cut(s) 116
AccII CGCG 6 cut(s) 176, 195, 439, 625, 627, 634
AccIII TCCGGA 1 cut(s) 399
AclI AACGTT 1 cut(s) 563
AclWI GGATC 5 cut(s) 23, 245, 285, 298, 671
AcsI RAATTY 1 cut(s) 595
AcyI GRCGYC 1 cut(s) 546
AfaI GTAC 2 cut(s) 103, 371
AfiI CCNNNNNNNGG 8 cut(s) 29, 49, 75, 167, 463, 497, 585, 591
AgsI TTSAA 2 cut(s) 125, 409
AjiI CACGTC 2 cut(s) 443, 582
AluBI AGCT 1 cut(s) 204
AluI AGCT 1 cut(s) 204
Alw21I GWGCWC 1 cut(s) 453
Alw26I GTCTC 3 cut(s) 345, 553, 623
AlwI GGATC 5 cut(s) 23, 245, 285, 298, 671
Ama87I CYCGRG 5 cut(s) 130, 167, 205, 279, 530
Aor13HI TCCGGA 1 cut(s) 399
AoxI GGCC 2 cut(s) 412, 534
ApeKI GCWGC 2 cut(s) 201, 264
ApoI RAATTY 1 cut(s) 595
AspLEI GCGC 3 cut(s) 425, 627, 636
AspS9I GGNCC 6 cut(s) 40, 243, 394, 412, 466, 535
AsuC2I CCSGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
AsuHPI GGTGA 2 cut(s) 207, 335
AsuII TTCGAA 1 cut(s) 616
AvaI CYCGRG 5 cut(s) 130, 167, 205, 279, 530
AvaII GGWCC 4 cut(s) 40, 243, 394, 466
BaeGI GKGCMC 3 cut(s) 62, 174, 255
BamHI GGATCC 1 cut(s) 290
Bbv12I GWGCWC 1 cut(s) 453
BbvI GCAGC 2 cut(s) 213, 276
BceAI ACGGC 2 cut(s) 469, 553
BcnI CCSGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
BcoDI GTCTC 3 cut(s) 345, 553, 623
BfuAI ACCTGC 1 cut(s) 492
BglI GCCNNNNNGGC 2 cut(s) 31, 420
BisI GCNGC 6 cut(s) 177, 193, 202, 265, 415, 461
BlsI GCNGC 6 cut(s) 178, 194, 203, 266, 416, 462
Bme1390I CCNGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
Bme18I GGWCC 4 cut(s) 40, 243, 394, 466
BmeT110I CYCGRG 5 cut(s) 130, 167, 205, 279, 530
BmgBI CACGTC 2 cut(s) 443, 582
BmgT120I GGNCC 6 cut(s) 40, 243, 394, 412, 466, 535
BmiI GGNNCC 6 cut(s) 41, 244, 245, 292, 468, 537
BmrFI CCNGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
BmsI GCATC 1 cut(s) 347
Bpu14I TTCGAA 1 cut(s) 616
BpuMI CCSGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
BsaHI GRCGYC 1 cut(s) 546
BsaI GGTCTC 1 cut(s) 345
BsaJI CCNNGG 8 cut(s) 130, 166, 167, 193, 280, 346, 418, 531
BsaWI WCCGGW 2 cut(s) 399, 427
BsaXI ACNNNNNCTCC 2 cut(s) 458, 488
Bsc4I CCNNNNNNNGG 8 cut(s) 29, 49, 75, 167, 463, 497, 585, 591
Bse118I RCCGGY 2 cut(s) 25, 375
Bse1I ACTGG 2 cut(s) 105, 491
BseAI TCCGGA 1 cut(s) 399
BseDI CCNNGG 8 cut(s) 130, 166, 167, 193, 280, 346, 418, 531
BseLI CCNNNNNNNGG 8 cut(s) 29, 49, 75, 167, 463, 497, 585, 591
BseNI ACTGG 2 cut(s) 105, 491
BseSI GKGCMC 3 cut(s) 62, 174, 255
BseXI GCAGC 2 cut(s) 213, 276
BseYI CCCAGC 2 cut(s) 29, 254
Bsh1236I CGCG 6 cut(s) 176, 195, 439, 625, 627, 634
Bsh1285I CGRYCG 2 cut(s) 120, 376
BshFI GGCC 2 cut(s) 414, 536
BsiEI CGRYCG 2 cut(s) 120, 376
BsiHKAI GWGCWC 1 cut(s) 453
BsiHKCI CYCGRG 5 cut(s) 130, 167, 205, 279, 530
BslFI GGGAC 3 cut(s) 148, 256, 568
BslI CCNNNNNNNGG 8 cut(s) 29, 49, 75, 167, 463, 497, 585, 591
BsmAI GTCTC 3 cut(s) 345, 553, 623
BsmBI CGTCTC 2 cut(s) 553, 623
BsmFI GGGAC 3 cut(s) 148, 256, 568
BsnI GGCC 2 cut(s) 414, 536
Bso31I GGTCTC 1 cut(s) 345
BsoBI CYCGRG 5 cut(s) 130, 167, 205, 279, 530
Bsp119I TTCGAA 1 cut(s) 616
Bsp1286I GDGCHC 4 cut(s) 62, 174, 255, 453
Bsp13I TCCGGA 1 cut(s) 399
Bsp143I GATC 4 cut(s) 15, 237, 290, 663
BspANI GGCC 2 cut(s) 414, 536
BspEI TCCGGA 1 cut(s) 399
BspFNI CGCG 6 cut(s) 176, 195, 439, 625, 627, 634
BspLI GGNNCC 6 cut(s) 41, 244, 245, 292, 468, 537
BspMI ACCTGC 1 cut(s) 492
BspPI GGATC 5 cut(s) 23, 245, 285, 298, 671
BspQI GCTCTTC 1 cut(s) 458
BspT104I TTCGAA 1 cut(s) 616
BspTNI GGTCTC 1 cut(s) 345
BsrBI CCGCTC 1 cut(s) 186
BsrFI RCCGGY 2 cut(s) 25, 375
BsrI ACTGG 2 cut(s) 105, 491
BssAI RCCGGY 2 cut(s) 25, 375
BssECI CCNNGG 8 cut(s) 130, 166, 167, 193, 280, 346, 418, 531
BssMI GATC 4 cut(s) 15, 237, 290, 663
BssNI GRCGYC 1 cut(s) 546
BssT1I CCWWGG 1 cut(s) 346
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 2 cut(s) 458, 531
BstACI GRCGYC 1 cut(s) 546
BstBI TTCGAA 1 cut(s) 616
BstC8I GCNNGC 4 cut(s) 23, 27, 174, 337
BstDEI CTNAG 1 cut(s) 659
BstDSI CCRYGG 1 cut(s) 193
BstEII GGTNACC 1 cut(s) 647
BstFNI CGCG 6 cut(s) 176, 195, 439, 625, 627, 634
BstHHI GCGC 3 cut(s) 425, 627, 636
BstKTI GATC 4 cut(s) 18, 240, 293, 666
BstMAI GTCTC 3 cut(s) 345, 553, 623
BstMBI GATC 4 cut(s) 15, 237, 290, 663
BstMCI CGRYCG 2 cut(s) 120, 376
BstPI GGTNACC 1 cut(s) 647
BstSCI CCNGG 7 cut(s) 11, 129, 130, 166, 167, 417, 584
BstSLI GKGCMC 3 cut(s) 62, 174, 255
BstUI CGCG 6 cut(s) 176, 195, 439, 625, 627, 634
BstV1I GCAGC 2 cut(s) 213, 276
BstX2I RGATCY 1 cut(s) 290
BstYI RGATCY 1 cut(s) 290
BsuRI GGCC 2 cut(s) 414, 536
BtgI CCRYGG 1 cut(s) 193
BtrI CACGTC 2 cut(s) 443, 582
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 2 cut(s) 62, 498
BveI ACCTGC 1 cut(s) 492
Cac8I GCNNGC 4 cut(s) 23, 27, 174, 337
CfoI GCGC 3 cut(s) 425, 627, 636
Cfr10I RCCGGY 2 cut(s) 25, 375
Cfr13I GGNCC 6 cut(s) 40, 243, 394, 412, 466, 535
Cfr42I CCGCGG 1 cut(s) 196
Cfr9I CCCGGG 2 cut(s) 130, 167
CseI GACGC 1 cut(s) 640
Csp6I GTAC 2 cut(s) 102, 370
CviQI GTAC 2 cut(s) 102, 370
DdeI CTNAG 1 cut(s) 659
DpnI GATC 4 cut(s) 17, 239, 292, 665
DpnII GATC 4 cut(s) 15, 237, 290, 663
Eam1104I CTCTTC 2 cut(s) 458, 531
EarI CTCTTC 2 cut(s) 458, 531
EciI GGCGGA 1 cut(s) 466
Eco130I CCWWGG 1 cut(s) 346
Eco31I GGTCTC 1 cut(s) 345
Eco47I GGWCC 4 cut(s) 40, 243, 394, 466
Eco88I CYCGRG 5 cut(s) 130, 167, 205, 279, 530
Eco91I GGTNACC 1 cut(s) 647
EcoO109I RGGNCCY 2 cut(s) 243, 535
EcoO65I GGTNACC 1 cut(s) 647
EcoT14I CCWWGG 1 cut(s) 346
ErhI CCWWGG 1 cut(s) 346
Esp3I CGTCTC 2 cut(s) 553, 623
FaiI YATR 1 cut(s) 366
FaqI GGGAC 3 cut(s) 148, 256, 568
FauI CCCGC 5 cut(s) 30, 70, 191, 547, 660
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 6 cut(s) 177, 193, 202, 265, 415, 461
Fsp4HI GCNGC 6 cut(s) 177, 193, 202, 265, 415, 461
GlaI GCGC 3 cut(s) 424, 626, 635
GluI GCNGC 6 cut(s) 177, 193, 202, 265, 415, 461
GsaI CCCAGC 2 cut(s) 33, 258
HaeIII GGCC 2 cut(s) 414, 536
HgaI GACGC 1 cut(s) 640
HhaI GCGC 3 cut(s) 425, 627, 636
Hin1I GRCGYC 1 cut(s) 546
Hin6I GCGC 3 cut(s) 423, 625, 634
HinP1I GCGC 3 cut(s) 423, 625, 634
HincII GTYRAC 2 cut(s) 117, 573
HindII GTYRAC 2 cut(s) 117, 573
HinfI GANTC 5 cut(s) 71, 88, 113, 554, 607
HphI GGTGA 2 cut(s) 207, 335
Hpy166II GTNNAC 4 cut(s) 117, 215, 343, 573
Hpy188I TCNGA 4 cut(s) 70, 87, 112, 553
Hpy188III TCNNGA 6 cut(s) 235, 241, 279, 400, 530, 592
Hpy8I GTNNAC 4 cut(s) 117, 215, 343, 573
Hpy99I CGWCG 4 cut(s) 230, 444, 548, 645
HpyAV CCTTC 1 cut(s) 139
HpyCH4III ACNGT 1 cut(s) 121
HpyCH4IV ACGT 4 cut(s) 442, 546, 563, 581
HpyF3I CTNAG 1 cut(s) 659
HpySE526I ACGT 4 cut(s) 442, 546, 563, 581
Hsp92I GRCGYC 1 cut(s) 546
HspAI GCGC 3 cut(s) 423, 625, 634
KflI GGGWCCC 1 cut(s) 243
Kpn2I TCCGGA 1 cut(s) 399
KroI GCCGGC 1 cut(s) 25
KroNI GCCGGC 1 cut(s) 27
KspI CCGCGG 1 cut(s) 196
Kzo9I GATC 4 cut(s) 15, 237, 290, 663
LguI GCTCTTC 1 cut(s) 458
LmnI GCTCC 1 cut(s) 148
Lsp1109I GCAGC 2 cut(s) 213, 276
LweI GCATC 1 cut(s) 347
MaeII ACGT 4 cut(s) 442, 546, 563, 581
MaeIII GTNAC 2 cut(s) 284, 647
MalI GATC 4 cut(s) 17, 239, 292, 665
MbiI CCGCTC 1 cut(s) 186
MboI GATC 4 cut(s) 15, 237, 290, 663
MboII GAAGA 2 cut(s) 445, 518
MflI RGATCY 1 cut(s) 290
MhlI GDGCHC 4 cut(s) 62, 174, 255, 453
MluCI AATT 1 cut(s) 595
MlyI GAGTC 2 cut(s) 122, 548
MmeI TCCRAC 1 cut(s) 576
MnlI CCTC 8 cut(s) 43, 76, 270, 275, 407, 484, 526, 666
MroI TCCGGA 1 cut(s) 399
MroNI GCCGGC 1 cut(s) 25
MseI TTAA 2 cut(s) 509, 600
MspA1I CMGCKG 1 cut(s) 195
MspR9I CCNGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
MvnI CGCG 6 cut(s) 176, 195, 439, 625, 627, 634
NaeI GCCGGC 1 cut(s) 27
NciI CCSGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
NdeII GATC 4 cut(s) 15, 237, 290, 663
NgoMIV GCCGGC 1 cut(s) 25
NlaIV GGNNCC 6 cut(s) 41, 244, 245, 292, 468, 537
NmeAIII GCCGAG 1 cut(s) 505
NspV TTCGAA 1 cut(s) 616
PaeR7I CTCGAG 1 cut(s) 205
PciSI GCTCTTC 1 cut(s) 458
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PdiI GCCGGC 1 cut(s) 27
PfeI GAWTC 3 cut(s) 71, 88, 607
PkrI GCNGC 6 cut(s) 178, 194, 203, 266, 416, 462
PleI GAGTC 2 cut(s) 121, 548
PpsI GAGTC 2 cut(s) 121, 548
PpuMI RGGWCCY 1 cut(s) 243
Psp1406I AACGTT 1 cut(s) 563
Psp5II RGGWCCY 1 cut(s) 243
PspEI GGTNACC 1 cut(s) 647
PspFI CCCAGC 2 cut(s) 29, 254
PspN4I GGNNCC 6 cut(s) 41, 244, 245, 292, 468, 537
PspPI GGNCC 6 cut(s) 40, 243, 394, 412, 466, 535
PspPPI RGGWCCY 1 cut(s) 243
PspXI VCTCGAGB 1 cut(s) 205
PsuI RGATCY 1 cut(s) 290
RsaI GTAC 2 cut(s) 103, 371
RsaNI GTAC 2 cut(s) 102, 370
SacII CCGCGG 1 cut(s) 196
SalI GTCGAC 1 cut(s) 115
SapI GCTCTTC 1 cut(s) 458
SaqAI TTAA 2 cut(s) 509, 600
SatI GCNGC 6 cut(s) 177, 193, 202, 265, 415, 461
Sau3AI GATC 4 cut(s) 15, 237, 290, 663
Sau96I GGNCC 6 cut(s) 40, 243, 394, 412, 466, 535
SchI GAGTC 2 cut(s) 122, 548
ScrFI CCNGG 7 cut(s) 13, 131, 132, 168, 169, 419, 586
SduI GDGCHC 4 cut(s) 62, 174, 255, 453
SetI ASST 9 cut(s) 206, 286, 348, 445, 476, 506, 549, 566, 584
SfaNI GCATC 1 cut(s) 347
Sfr274I CTCGAG 1 cut(s) 205
Sfr303I CCGCGG 1 cut(s) 196
SfuI TTCGAA 1 cut(s) 616
SgrBI CCGCGG 1 cut(s) 196
SinI GGWCC 4 cut(s) 40, 243, 394, 466
SlaI CTCGAG 1 cut(s) 205
SmaI CCCGGG 2 cut(s) 132, 169
SmlI CTYRAG 1 cut(s) 205
SmoI CTYRAG 1 cut(s) 205
Sse9I AATT 1 cut(s) 595
StyD4I CCNGG 7 cut(s) 11, 129, 130, 166, 167, 417, 584
StyI CCWWGG 1 cut(s) 346
TaaI ACNGT 1 cut(s) 121
TaiI ACGT 4 cut(s) 445, 549, 566, 584
TaqI TCGA 5 cut(s) 116, 206, 616, 640, 666
TaqII GACCGA 2 cut(s) 369, 382
TasI AATT 1 cut(s) 595
TauI GCSGC 4 cut(s) 179, 195, 417, 463
TfiI GAWTC 3 cut(s) 71, 88, 607
Tru1I TTAA 2 cut(s) 509, 600
Tru9I TTAA 2 cut(s) 509, 600
TscAI CASTG 2 cut(s) 62, 498
TseI GCWGC 2 cut(s) 201, 264
TspGWI ACGGA 4 cut(s) 89, 91, 150, 303
TspMI CCCGGG 2 cut(s) 130, 167
TspRI CASTG 2 cut(s) 62, 498
VpaK11BI GGWCC 4 cut(s) 40, 243, 394, 466
XapI RAATTY 1 cut(s) 595
XhoI CTCGAG 1 cut(s) 205
XmaI CCCGGG 2 cut(s) 130, 167
XmiI GTMKAC 1 cut(s) 116
ZraI GACGTC 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.