Rroxscaffold_31G00438140

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000031
OG0000098
Physical Location & Seq
Forward (+)
73220 .. 74500
1281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_31G00438140.1

Sequence Viewer

Length: 900 bp
ATGTCTTCCGCCCGGATCAGCCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCGTCCGTCCCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGAAGCGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGATCGGGACCCCGTGCCCAGCCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCGTGGTGGGCAGGCGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGAATTTTAACCCGATTCCCTCGAAGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGCCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGCTCACGCCCTGTGTTTTTGCAGCCGACCGCCGCGCCCTCCTACTCATCGGCCTCGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

299

Amino Acids

31.78

Weight (kDa)

11.55

Isoelectric Point (pI)

76.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 556
AccBSI CCGCTC 2 cut(s) 194, 776
AccI GTMKAC 1 cut(s) 119
AccII CGCG 8 cut(s) 184, 203, 447, 629, 631, 638, 818, 872
AccIII TCCGGA 1 cut(s) 407
AclI AACGTT 1 cut(s) 570
AclWI GGATC 5 cut(s) 23, 251, 291, 304, 673
AcoI YGGCCR 4 cut(s) 174, 486, 771, 855
AcsI RAATTY 1 cut(s) 601
AcyI GRCGYC 1 cut(s) 553
AfaI GTAC 2 cut(s) 106, 379
AfeI AGCGCT 1 cut(s) 209
AflII CTTAAG 1 cut(s) 875
AgsI TTSAA 4 cut(s) 128, 417, 723, 737
AjiI CACGTC 2 cut(s) 451, 589
Alw21I GWGCWC 1 cut(s) 461
Alw26I GTCTC 3 cut(s) 352, 560, 627
AlwI GGATC 5 cut(s) 23, 251, 291, 304, 673
Ama87I CYCGRG 4 cut(s) 133, 211, 285, 537
Aor13HI TCCGGA 1 cut(s) 407
Aor51HI AGCGCT 1 cut(s) 209
AoxI GGCC 8 cut(s) 174, 420, 486, 541, 716, 771, 834, 855
ApeKI GCWGC 2 cut(s) 270, 805
ApoI RAATTY 1 cut(s) 601
AspLEI GCGC 7 cut(s) 210, 433, 631, 640, 820, 874, 882
AspS9I GGNCC 6 cut(s) 43, 249, 402, 420, 474, 542
AsuC2I CCSGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
AsuHPI GGTGA 2 cut(s) 213, 342
AvaI CYCGRG 4 cut(s) 133, 211, 285, 537
AvaII GGWCC 4 cut(s) 43, 249, 402, 474
AxyI CCTNAGG 1 cut(s) 661
BaeGI GKGCMC 2 cut(s) 65, 260
BamHI GGATCC 1 cut(s) 296
Bbv12I GWGCWC 1 cut(s) 461
BbvI GCAGC 2 cut(s) 282, 817
BccI CCATC 1 cut(s) 891
BceAI ACGGC 5 cut(s) 478, 560, 674, 786, 870
BcnI CCSGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
BcoDI GTCTC 3 cut(s) 352, 560, 627
BfaI CTAG 1 cut(s) 898
BfoI RGCGCY 2 cut(s) 211, 883
BfrI CTTAAG 1 cut(s) 875
BglI GCCNNNNNGGC 2 cut(s) 428, 854
BglII AGATCT 1 cut(s) 758
BisI GCNGC 8 cut(s) 185, 201, 271, 423, 469, 774, 806, 816
BlsI GCNGC 8 cut(s) 186, 202, 272, 424, 470, 775, 807, 817
Bme1390I CCNGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
Bme18I GGWCC 4 cut(s) 43, 249, 402, 474
BmeT110I CYCGRG 4 cut(s) 133, 211, 285, 537
BmgBI CACGTC 2 cut(s) 451, 589
BmgT120I GGNCC 6 cut(s) 43, 249, 402, 420, 474, 542
BmiI GGNNCC 7 cut(s) 44, 250, 251, 298, 476, 544, 702
BmrFI CCNGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
BmsI GCATC 1 cut(s) 355
BpuMI CCSGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
BsaHI GRCGYC 1 cut(s) 553
BsaI GGTCTC 1 cut(s) 352
BsaJI CCNNGG 8 cut(s) 133, 171, 286, 353, 426, 500, 538, 837
BsaWI WCCGGW 2 cut(s) 407, 435
BsaXI ACNNNNNCTCC 4 cut(s) 466, 496, 760, 790
Bse118I RCCGGY 3 cut(s) 176, 383, 857
Bse1I ACTGG 1 cut(s) 108
Bse21I CCTNAGG 1 cut(s) 661
BseAI TCCGGA 1 cut(s) 407
BseDI CCNNGG 8 cut(s) 133, 171, 286, 353, 426, 500, 538, 837
BseGI GGATG 1 cut(s) 883
BseNI ACTGG 1 cut(s) 108
BseSI GKGCMC 2 cut(s) 65, 260
BseX3I CGGCCG 4 cut(s) 174, 486, 771, 855
BseXI GCAGC 2 cut(s) 282, 817
BseYI CCCAGC 1 cut(s) 259
BsgI GTGCAG 1 cut(s) 747
Bsh1236I CGCG 8 cut(s) 184, 203, 447, 629, 631, 638, 818, 872
Bsh1285I CGRYCG 7 cut(s) 123, 177, 384, 489, 774, 813, 858
BshFI GGCC 8 cut(s) 176, 422, 488, 543, 718, 773, 836, 857
BsiEI CGRYCG 7 cut(s) 123, 177, 384, 489, 774, 813, 858
BsiHKAI GWGCWC 1 cut(s) 461
BsiHKCI CYCGRG 4 cut(s) 133, 211, 285, 537
BslFI GGGAC 3 cut(s) 151, 262, 575
BsmAI GTCTC 3 cut(s) 352, 560, 627
BsmBI CGTCTC 2 cut(s) 560, 627
BsmFI GGGAC 3 cut(s) 151, 262, 575
BsnI GGCC 8 cut(s) 176, 422, 488, 543, 718, 773, 836, 857
Bso31I GGTCTC 1 cut(s) 352
BsoBI CYCGRG 4 cut(s) 133, 211, 285, 537
Bsp1286I GDGCHC 3 cut(s) 65, 260, 461
Bsp13I TCCGGA 1 cut(s) 407
Bsp143I GATC 5 cut(s) 15, 243, 296, 665, 758
BspANI GGCC 8 cut(s) 176, 422, 488, 543, 718, 773, 836, 857
BspEI TCCGGA 1 cut(s) 407
BspFNI CGCG 8 cut(s) 184, 203, 447, 629, 631, 638, 818, 872
BspLI GGNNCC 7 cut(s) 44, 250, 251, 298, 476, 544, 702
BspPI GGATC 5 cut(s) 23, 251, 291, 304, 673
BspQI GCTCTTC 1 cut(s) 466
BspTI CTTAAG 1 cut(s) 875
BspTNI GGTCTC 1 cut(s) 352
BsrBI CCGCTC 2 cut(s) 194, 776
BsrFI RCCGGY 3 cut(s) 176, 383, 857
BsrI ACTGG 1 cut(s) 108
BssAI RCCGGY 3 cut(s) 176, 383, 857
BssECI CCNNGG 8 cut(s) 133, 171, 286, 353, 426, 500, 538, 837
BssMI GATC 5 cut(s) 15, 243, 296, 665, 758
BssNI GRCGYC 1 cut(s) 553
BssT1I CCWWGG 1 cut(s) 353
Bst4CI ACNGT 1 cut(s) 124
Bst6I CTCTTC 3 cut(s) 466, 538, 717
BstACI GRCGYC 1 cut(s) 553
BstAFI CTTAAG 1 cut(s) 875
BstC8I GCNNGC 4 cut(s) 178, 182, 343, 511
BstDEI CTNAG 1 cut(s) 661
BstDSI CCRYGG 1 cut(s) 500
BstEII GGTNACC 1 cut(s) 651
BstF5I GGATG 1 cut(s) 883
BstFNI CGCG 8 cut(s) 184, 203, 447, 629, 631, 638, 818, 872
BstH2I RGCGCY 2 cut(s) 211, 883
BstHHI GCGC 7 cut(s) 210, 433, 631, 640, 820, 874, 882
BstKTI GATC 5 cut(s) 18, 246, 299, 668, 761
BstMAI GTCTC 3 cut(s) 352, 560, 627
BstMBI GATC 5 cut(s) 15, 243, 296, 665, 758
BstMCI CGRYCG 7 cut(s) 123, 177, 384, 489, 774, 813, 858
BstMWI GCNNNNNNNGC 8 cut(s) 200, 393, 428, 465, 635, 637, 770, 854
BstPI GGTNACC 1 cut(s) 651
BstSCI CCNGG 7 cut(s) 11, 132, 133, 171, 425, 591, 781
BstSLI GKGCMC 2 cut(s) 65, 260
BstUI CGCG 8 cut(s) 184, 203, 447, 629, 631, 638, 818, 872
BstV1I GCAGC 2 cut(s) 282, 817
BstX2I RGATCY 2 cut(s) 296, 758
BstYI RGATCY 2 cut(s) 296, 758
BstZI CGGCCG 4 cut(s) 174, 486, 771, 855
Bsu36I CCTNAGG 1 cut(s) 661
BsuRI GGCC 8 cut(s) 176, 422, 488, 543, 718, 773, 836, 857
BtgI CCRYGG 1 cut(s) 500
BtrI CACGTC 2 cut(s) 451, 589
BtsCI GGATG 1 cut(s) 883
BtsI GCAGTG 2 cut(s) 39, 65
BtsIMutI CAGTG 2 cut(s) 39, 65
Cac8I GCNNGC 4 cut(s) 178, 182, 343, 511
CfoI GCGC 7 cut(s) 210, 433, 631, 640, 820, 874, 882
Cfr10I RCCGGY 3 cut(s) 176, 383, 857
Cfr13I GGNCC 6 cut(s) 43, 249, 402, 420, 474, 542
Cfr9I CCCGGG 1 cut(s) 133
CseI GACGC 1 cut(s) 644
Csp6I GTAC 2 cut(s) 105, 378
CviAII CATG 2 cut(s) 678, 697
CviQI GTAC 2 cut(s) 105, 378
DdeI CTNAG 1 cut(s) 661
DpnI GATC 5 cut(s) 17, 245, 298, 667, 760
DpnII GATC 5 cut(s) 15, 243, 296, 665, 758
EaeI YGGCCR 4 cut(s) 174, 486, 771, 855
EagI CGGCCG 4 cut(s) 174, 486, 771, 855
Eam1104I CTCTTC 3 cut(s) 466, 538, 717
EarI CTCTTC 3 cut(s) 466, 538, 717
EciI GGCGGA 1 cut(s) 768
EclXI CGGCCG 4 cut(s) 174, 486, 771, 855
Eco130I CCWWGG 1 cut(s) 353
Eco31I GGTCTC 1 cut(s) 352
Eco47I GGWCC 4 cut(s) 43, 249, 402, 474
Eco47III AGCGCT 1 cut(s) 209
Eco52I CGGCCG 4 cut(s) 174, 486, 771, 855
Eco81I CCTNAGG 1 cut(s) 661
Eco88I CYCGRG 4 cut(s) 133, 211, 285, 537
Eco91I GGTNACC 1 cut(s) 651
EcoO109I RGGNCCY 2 cut(s) 249, 542
EcoO65I GGTNACC 1 cut(s) 651
EcoT14I CCWWGG 1 cut(s) 353
ErhI CCWWGG 1 cut(s) 353
Esp3I CGTCTC 2 cut(s) 560, 627
FaeI CATG 2 cut(s) 681, 700
FaiI YATR 4 cut(s) 374, 679, 698, 863
FalI AAGNNNNNCTT 2 cut(s) 21, 53
FaqI GGGAC 3 cut(s) 151, 262, 575
FatI CATG 2 cut(s) 677, 696
FauI CCCGC 5 cut(s) 31, 73, 199, 554, 664
FblI GTMKAC 1 cut(s) 119
Fnu4HI GCNGC 8 cut(s) 185, 201, 271, 423, 469, 774, 806, 816
FokI GGATG 1 cut(s) 870
Fsp4HI GCNGC 8 cut(s) 185, 201, 271, 423, 469, 774, 806, 816
FspBI CTAG 1 cut(s) 898
GlaI GCGC 7 cut(s) 209, 432, 630, 639, 819, 873, 881
GluI GCNGC 8 cut(s) 185, 201, 271, 423, 469, 774, 806, 816
GsaI CCCAGC 1 cut(s) 263
HaeII RGCGCY 2 cut(s) 211, 883
HaeIII GGCC 8 cut(s) 176, 422, 488, 543, 718, 773, 836, 857
HgaI GACGC 1 cut(s) 644
HhaI GCGC 7 cut(s) 210, 433, 631, 640, 820, 874, 882
Hin1I GRCGYC 1 cut(s) 553
Hin1II CATG 2 cut(s) 681, 700
Hin6I GCGC 7 cut(s) 208, 431, 629, 638, 818, 872, 880
HinP1I GCGC 7 cut(s) 208, 431, 629, 638, 818, 872, 880
HincII GTYRAC 2 cut(s) 120, 580
HindII GTYRAC 2 cut(s) 120, 580
HinfI GANTC 5 cut(s) 74, 91, 116, 561, 613
HphI GGTGA 2 cut(s) 213, 342
Hpy166II GTNNAC 5 cut(s) 120, 221, 350, 580, 694
Hpy188I TCNGA 5 cut(s) 73, 90, 115, 560, 600
Hpy188III TCNNGA 5 cut(s) 241, 247, 285, 408, 537
Hpy8I GTNNAC 5 cut(s) 120, 221, 350, 580, 694
Hpy99I CGWCG 6 cut(s) 236, 452, 555, 649, 772, 856
HpyAV CCTTC 2 cut(s) 142, 729
HpyCH4III ACNGT 1 cut(s) 124
HpyCH4IV ACGT 4 cut(s) 450, 553, 570, 588
HpyCH4V TGCA 3 cut(s) 683, 764, 805
HpyF10VI GCNNNNNNNGC 8 cut(s) 200, 393, 428, 465, 635, 637, 770, 854
HpyF3I CTNAG 1 cut(s) 661
HpySE526I ACGT 4 cut(s) 450, 553, 570, 588
Hsp92I GRCGYC 1 cut(s) 553
Hsp92II CATG 2 cut(s) 681, 700
HspAI GCGC 7 cut(s) 208, 431, 629, 638, 818, 872, 880
KflI GGGWCCC 1 cut(s) 249
Kpn2I TCCGGA 1 cut(s) 407
KroI GCCGGC 1 cut(s) 176
KroNI GCCGGC 1 cut(s) 178
Kzo9I GATC 5 cut(s) 15, 243, 296, 665, 758
LguI GCTCTTC 1 cut(s) 466
LmnI GCTCC 2 cut(s) 151, 781
Lsp1109I GCAGC 2 cut(s) 282, 817
LweI GCATC 1 cut(s) 355
MaeI CTAG 1 cut(s) 898
MaeII ACGT 4 cut(s) 450, 553, 570, 588
MaeIII GTNAC 3 cut(s) 290, 651, 866
MalI GATC 5 cut(s) 17, 245, 298, 667, 760
MbiI CCGCTC 2 cut(s) 194, 776
MboI GATC 5 cut(s) 15, 243, 296, 665, 758
MboII GAAGA 3 cut(s) 453, 525, 704
MflI RGATCY 2 cut(s) 296, 758
MhlI GDGCHC 3 cut(s) 65, 260, 461
MluCI AATT 1 cut(s) 601
MlyI GAGTC 2 cut(s) 125, 555
MmeI TCCRAC 1 cut(s) 583
MroI TCCGGA 1 cut(s) 407
MroNI GCCGGC 1 cut(s) 176
MseI TTAA 3 cut(s) 516, 606, 876
MspCI CTTAAG 1 cut(s) 875
MspR9I CCNGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
MvnI CGCG 8 cut(s) 184, 203, 447, 629, 631, 638, 818, 872
MwoI GCNNNNNNNGC 8 cut(s) 200, 393, 428, 465, 635, 637, 770, 854
NaeI GCCGGC 1 cut(s) 178
NciI CCSGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
NdeII GATC 5 cut(s) 15, 243, 296, 665, 758
NgoMIV GCCGGC 1 cut(s) 176
NlaIII CATG 2 cut(s) 681, 700
NlaIV GGNNCC 7 cut(s) 44, 250, 251, 298, 476, 544, 702
NmeAIII GCCGAG 2 cut(s) 514, 818
NmuCI GTSAC 1 cut(s) 866
PaeR7I CTCGAG 1 cut(s) 211
PciSI GCTCTTC 1 cut(s) 466
PdiI GCCGGC 1 cut(s) 178
PfeI GAWTC 3 cut(s) 74, 91, 613
PkrI GCNGC 8 cut(s) 186, 202, 272, 424, 470, 775, 807, 817
PleI GAGTC 2 cut(s) 124, 555
PpsI GAGTC 2 cut(s) 124, 555
PpuMI RGGWCCY 1 cut(s) 249
Psp1406I AACGTT 1 cut(s) 570
Psp5II RGGWCCY 1 cut(s) 249
PspEI GGTNACC 1 cut(s) 651
PspFI CCCAGC 1 cut(s) 259
PspN4I GGNNCC 7 cut(s) 44, 250, 251, 298, 476, 544, 702
PspPI GGNCC 6 cut(s) 43, 249, 402, 420, 474, 542
PspPPI RGGWCCY 1 cut(s) 249
PspXI VCTCGAGB 1 cut(s) 211
PsuI RGATCY 2 cut(s) 296, 758
RsaI GTAC 2 cut(s) 106, 379
RsaNI GTAC 2 cut(s) 105, 378
SalI GTCGAC 1 cut(s) 118
SapI GCTCTTC 1 cut(s) 466
SaqAI TTAA 3 cut(s) 516, 606, 876
SatI GCNGC 8 cut(s) 185, 201, 271, 423, 469, 774, 806, 816
Sau3AI GATC 5 cut(s) 15, 243, 296, 665, 758
Sau96I GGNCC 6 cut(s) 43, 249, 402, 420, 474, 542
SchI GAGTC 2 cut(s) 125, 555
ScrFI CCNGG 7 cut(s) 13, 134, 135, 173, 427, 593, 783
SduI GDGCHC 3 cut(s) 65, 260, 461
SetI ASST 9 cut(s) 292, 355, 453, 484, 556, 573, 591, 706, 868
SfaNI GCATC 1 cut(s) 355
Sfr274I CTCGAG 1 cut(s) 211
SinI GGWCC 4 cut(s) 43, 249, 402, 474
SlaI CTCGAG 1 cut(s) 211
SmaI CCCGGG 1 cut(s) 135
SmlI CTYRAG 2 cut(s) 211, 875
SmoI CTYRAG 2 cut(s) 211, 875
Sse9I AATT 1 cut(s) 601
SspI AATATT 1 cut(s) 740
SspMI CTAG 1 cut(s) 898
StyD4I CCNGG 7 cut(s) 11, 132, 133, 171, 425, 591, 781
StyI CCWWGG 1 cut(s) 353
TaaI ACNGT 1 cut(s) 124
TaiI ACGT 4 cut(s) 453, 556, 573, 591
TaqI TCGA 5 cut(s) 119, 212, 620, 644, 668
TaqII GACCGA 1 cut(s) 390
TasI AATT 1 cut(s) 601
TauI GCSGC 6 cut(s) 187, 203, 425, 471, 776, 818
TfiI GAWTC 3 cut(s) 74, 91, 613
Tru1I TTAA 3 cut(s) 516, 606, 876
Tru9I TTAA 3 cut(s) 516, 606, 876
TscAI CASTG 2 cut(s) 39, 65
TseFI GTSAC 1 cut(s) 866
TseI GCWGC 2 cut(s) 270, 805
Tsp45I GTSAC 1 cut(s) 866
TspGWI ACGGA 5 cut(s) 92, 94, 153, 309, 489
TspMI CCCGGG 1 cut(s) 133
TspRI CASTG 2 cut(s) 39, 65
Vha464I CTTAAG 1 cut(s) 875
VpaK11BI GGWCC 4 cut(s) 43, 249, 402, 474
XapI RAATTY 1 cut(s) 601
XhoI CTCGAG 1 cut(s) 211
XmaI CCCGGG 1 cut(s) 133
XmiI GTMKAC 1 cut(s) 119
XspI CTAG 1 cut(s) 898
ZraI GACGTC 1 cut(s) 554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.