Rroxscaffold_97G00442400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000097
OG0000098
Physical Location & Seq
Forward (+)
116634 .. 117827
1194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_97G00442400.1

Sequence Viewer

Length: 489 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTTATCCCCGTGTTCCCGAGTCGACCGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCTCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGATCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGCCGAGCCGTTTCCGTGGTGGGCAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

162

Amino Acids

18.65

Weight (kDa)

10.11

Isoelectric Point (pI)

61.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 166
AccI GTMKAC 1 cut(s) 92
AccII CGCG 3 cut(s) 156, 175, 421
AccIII TCCGGA 1 cut(s) 381
AclWI GGATC 4 cut(s) 34, 225, 265, 278
AcoI YGGCCR 1 cut(s) 147
AfaI GTAC 1 cut(s) 353
AfiI CCNNNNNNNGG 2 cut(s) 145, 445
AgsI TTSAA 2 cut(s) 101, 391
AjiI CACGTC 1 cut(s) 425
AluBI AGCT 1 cut(s) 184
AluI AGCT 1 cut(s) 184
Alw21I GWGCWC 1 cut(s) 435
Alw26I GTCTC 2 cut(s) 146, 326
AlwI GGATC 4 cut(s) 34, 225, 265, 278
Ama87I CYCGRG 4 cut(s) 86, 106, 185, 259
Aor13HI TCCGGA 1 cut(s) 381
AoxI GGCC 2 cut(s) 147, 394
ApeKI GCWGC 3 cut(s) 58, 181, 244
AspLEI GCGC 1 cut(s) 407
AspS9I GGNCC 4 cut(s) 223, 376, 394, 448
AsuC2I CCSGG 4 cut(s) 107, 108, 146, 401
AsuHPI GGTGA 2 cut(s) 187, 316
AvaI CYCGRG 4 cut(s) 86, 106, 185, 259
AvaII GGWCC 3 cut(s) 223, 376, 448
BaeGI GKGCMC 1 cut(s) 235
BamHI GGATCC 1 cut(s) 270
Bbv12I GWGCWC 1 cut(s) 435
BbvI GCAGC 3 cut(s) 45, 193, 256
BceAI ACGGC 1 cut(s) 451
BcnI CCSGG 4 cut(s) 107, 108, 146, 401
BcoDI GTCTC 2 cut(s) 146, 326
BglI GCCNNNNNGGC 1 cut(s) 402
BisI GCNGC 9 cut(s) 59, 69, 150, 157, 173, 182, 245, 397, 443
BlsI GCNGC 9 cut(s) 60, 70, 151, 158, 174, 183, 246, 398, 444
Bme1390I CCNGG 4 cut(s) 107, 108, 146, 401
Bme18I GGWCC 3 cut(s) 223, 376, 448
BmeT110I CYCGRG 4 cut(s) 86, 106, 185, 259
BmgBI CACGTC 1 cut(s) 425
BmgT120I GGNCC 4 cut(s) 223, 376, 394, 448
BmiI GGNNCC 4 cut(s) 224, 225, 272, 450
BmrFI CCNGG 4 cut(s) 107, 108, 146, 401
BmrI ACTGGG 1 cut(s) 128
BmsI GCATC 1 cut(s) 329
BmuI ACTGGG 1 cut(s) 128
BpuMI CCSGG 4 cut(s) 107, 108, 146, 401
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 7 cut(s) 106, 107, 173, 260, 327, 400, 473
BsaWI WCCGGW 2 cut(s) 381, 409
BsaXI ACNNNNNCTCC 2 cut(s) 440, 470
Bsc4I CCNNNNNNNGG 2 cut(s) 145, 445
Bse118I RCCGGY 1 cut(s) 357
Bse1I ACTGG 1 cut(s) 134
BseAI TCCGGA 1 cut(s) 381
BseDI CCNNGG 7 cut(s) 106, 107, 173, 260, 327, 400, 473
BseLI CCNNNNNNNGG 2 cut(s) 145, 445
BseNI ACTGG 1 cut(s) 134
BseSI GKGCMC 1 cut(s) 235
BseX3I CGGCCG 1 cut(s) 147
BseXI GCAGC 3 cut(s) 45, 193, 256
BseYI CCCAGC 1 cut(s) 234
Bsh1236I CGCG 3 cut(s) 156, 175, 421
Bsh1285I CGRYCG 3 cut(s) 96, 150, 358
BshFI GGCC 2 cut(s) 149, 396
BsiEI CGRYCG 3 cut(s) 96, 150, 358
BsiHKAI GWGCWC 1 cut(s) 435
BsiHKCI CYCGRG 4 cut(s) 86, 106, 185, 259
BsiSI CCGG 7 cut(s) 107, 146, 358, 382, 400, 410, 446
BslFI GGGAC 1 cut(s) 236
BslI CCNNNNNNNGG 2 cut(s) 145, 445
BsmAI GTCTC 2 cut(s) 146, 326
BsmBI CGTCTC 1 cut(s) 146
BsmFI GGGAC 1 cut(s) 236
BsnI GGCC 2 cut(s) 149, 396
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 4 cut(s) 86, 106, 185, 259
Bsp1286I GDGCHC 2 cut(s) 235, 435
Bsp13I TCCGGA 1 cut(s) 381
Bsp143I GATC 3 cut(s) 26, 217, 270
BspANI GGCC 2 cut(s) 149, 396
BspEI TCCGGA 1 cut(s) 381
BspFNI CGCG 3 cut(s) 156, 175, 421
BspLI GGNNCC 4 cut(s) 224, 225, 272, 450
BspPI GGATC 4 cut(s) 34, 225, 265, 278
BspQI GCTCTTC 2 cut(s) 4, 440
BspTNI GGTCTC 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 166
BsrFI RCCGGY 1 cut(s) 357
BsrI ACTGG 1 cut(s) 134
BssAI RCCGGY 1 cut(s) 357
BssECI CCNNGG 7 cut(s) 106, 107, 173, 260, 327, 400, 473
BssMI GATC 3 cut(s) 26, 217, 270
BssT1I CCWWGG 1 cut(s) 327
Bst4CI ACNGT 1 cut(s) 97
Bst6I CTCTTC 2 cut(s) 4, 440
BstC8I GCNNGC 2 cut(s) 154, 317
BstDSI CCRYGG 2 cut(s) 173, 473
BstFNI CGCG 3 cut(s) 156, 175, 421
BstHHI GCGC 1 cut(s) 407
BstKTI GATC 3 cut(s) 29, 220, 273
BstMAI GTCTC 2 cut(s) 146, 326
BstMBI GATC 3 cut(s) 26, 217, 270
BstMCI CGRYCG 3 cut(s) 96, 150, 358
BstMWI GCNNNNNNNGC 9 cut(s) 50, 172, 178, 181, 187, 244, 367, 402, 439
BstSCI CCNGG 4 cut(s) 105, 106, 144, 399
BstSLI GKGCMC 1 cut(s) 235
BstUI CGCG 3 cut(s) 156, 175, 421
BstV1I GCAGC 3 cut(s) 45, 193, 256
BstX2I RGATCY 1 cut(s) 270
BstYI RGATCY 1 cut(s) 270
BstZI CGGCCG 1 cut(s) 147
BsuRI GGCC 2 cut(s) 149, 396
BtgI CCRYGG 2 cut(s) 173, 473
BtrI CACGTC 1 cut(s) 425
Cac8I GCNNGC 2 cut(s) 154, 317
CfoI GCGC 1 cut(s) 407
Cfr10I RCCGGY 1 cut(s) 357
Cfr13I GGNCC 4 cut(s) 223, 376, 394, 448
Cfr42I CCGCGG 1 cut(s) 176
Cfr9I CCCGGG 1 cut(s) 106
Csp6I GTAC 1 cut(s) 352
CviQI GTAC 1 cut(s) 352
DpnI GATC 3 cut(s) 28, 219, 272
DpnII GATC 3 cut(s) 26, 217, 270
EaeI YGGCCR 1 cut(s) 147
EagI CGGCCG 1 cut(s) 147
Eam1104I CTCTTC 2 cut(s) 4, 440
EarI CTCTTC 2 cut(s) 4, 440
EciI GGCGGA 1 cut(s) 448
EclXI CGGCCG 1 cut(s) 147
Eco130I CCWWGG 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 3 cut(s) 223, 376, 448
Eco52I CGGCCG 1 cut(s) 147
Eco88I CYCGRG 4 cut(s) 86, 106, 185, 259
EcoO109I RGGNCCY 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 327
ErhI CCWWGG 1 cut(s) 327
Esp3I CGTCTC 1 cut(s) 146
FaiI YATR 2 cut(s) 47, 348
FaqI GGGAC 1 cut(s) 236
FauI CCCGC 1 cut(s) 171
FblI GTMKAC 1 cut(s) 92
Fnu4HI GCNGC 9 cut(s) 59, 69, 150, 157, 173, 182, 245, 397, 443
Fsp4HI GCNGC 9 cut(s) 59, 69, 150, 157, 173, 182, 245, 397, 443
GlaI GCGC 1 cut(s) 406
GluI GCNGC 9 cut(s) 59, 69, 150, 157, 173, 182, 245, 397, 443
GsaI CCCAGC 1 cut(s) 238
HaeIII GGCC 2 cut(s) 149, 396
HapII CCGG 7 cut(s) 107, 146, 358, 382, 400, 410, 446
HhaI GCGC 1 cut(s) 407
Hin6I GCGC 1 cut(s) 405
HinP1I GCGC 1 cut(s) 405
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HinfI GANTC 1 cut(s) 89
HpaII CCGG 7 cut(s) 107, 146, 358, 382, 400, 410, 446
HphI GGTGA 2 cut(s) 187, 316
Hpy166II GTNNAC 3 cut(s) 93, 195, 324
Hpy188III TCNNGA 5 cut(s) 86, 215, 221, 259, 382
Hpy8I GTNNAC 3 cut(s) 93, 195, 324
Hpy99I CGWCG 3 cut(s) 44, 210, 426
HpyAV CCTTC 2 cut(s) 17, 116
HpyCH4III ACNGT 1 cut(s) 97
HpyCH4IV ACGT 2 cut(s) 39, 424
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 172, 178, 181, 187, 244, 367, 402, 439
HpySE526I ACGT 2 cut(s) 39, 424
HspAI GCGC 1 cut(s) 405
KflI GGGWCCC 1 cut(s) 223
Kpn2I TCCGGA 1 cut(s) 381
KspI CCGCGG 1 cut(s) 176
Kzo9I GATC 3 cut(s) 26, 217, 270
LguI GCTCTTC 2 cut(s) 4, 440
LmnI GCTCC 1 cut(s) 125
Lsp1109I GCAGC 3 cut(s) 45, 193, 256
LweI GCATC 1 cut(s) 329
MaeII ACGT 2 cut(s) 39, 424
MaeIII GTNAC 1 cut(s) 264
MalI GATC 3 cut(s) 28, 219, 272
MbiI CCGCTC 1 cut(s) 166
MboI GATC 3 cut(s) 26, 217, 270
MboII GAAGA 2 cut(s) 21, 427
MflI RGATCY 1 cut(s) 270
MhlI GDGCHC 2 cut(s) 235, 435
MlyI GAGTC 1 cut(s) 98
MnlI CCTC 4 cut(s) 250, 255, 389, 466
MroI TCCGGA 1 cut(s) 381
MseI TTAA 1 cut(s) 487
MspA1I CMGCKG 1 cut(s) 175
MspI CCGG 7 cut(s) 107, 146, 358, 382, 400, 410, 446
MspR9I CCNGG 4 cut(s) 107, 108, 146, 401
MvnI CGCG 3 cut(s) 156, 175, 421
MwoI GCNNNNNNNGC 9 cut(s) 50, 172, 178, 181, 187, 244, 367, 402, 439
NciI CCSGG 4 cut(s) 107, 108, 146, 401
NdeII GATC 3 cut(s) 26, 217, 270
NlaIV GGNNCC 4 cut(s) 224, 225, 272, 450
NmeAIII GCCGAG 1 cut(s) 487
PaeR7I CTCGAG 1 cut(s) 185
PciSI GCTCTTC 2 cut(s) 4, 440
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PkrI GCNGC 9 cut(s) 60, 70, 151, 158, 174, 183, 246, 398, 444
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
PpuMI RGGWCCY 1 cut(s) 223
Psp5II RGGWCCY 1 cut(s) 223
PspFI CCCAGC 1 cut(s) 234
PspN4I GGNNCC 4 cut(s) 224, 225, 272, 450
PspPI GGNCC 4 cut(s) 223, 376, 394, 448
PspPPI RGGWCCY 1 cut(s) 223
PspXI VCTCGAGB 1 cut(s) 185
PsuI RGATCY 1 cut(s) 270
RsaI GTAC 1 cut(s) 353
RsaNI GTAC 1 cut(s) 352
SacII CCGCGG 1 cut(s) 176
SalI GTCGAC 1 cut(s) 91
SapI GCTCTTC 2 cut(s) 4, 440
SaqAI TTAA 1 cut(s) 487
SatI GCNGC 9 cut(s) 59, 69, 150, 157, 173, 182, 245, 397, 443
Sau3AI GATC 3 cut(s) 26, 217, 270
Sau96I GGNCC 4 cut(s) 223, 376, 394, 448
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 4 cut(s) 107, 108, 146, 401
SduI GDGCHC 2 cut(s) 235, 435
SetI ASST 6 cut(s) 42, 186, 266, 329, 427, 458
SfaNI GCATC 1 cut(s) 329
Sfr274I CTCGAG 1 cut(s) 185
Sfr303I CCGCGG 1 cut(s) 176
SgrBI CCGCGG 1 cut(s) 176
SinI GGWCC 3 cut(s) 223, 376, 448
SlaI CTCGAG 1 cut(s) 185
SmaI CCCGGG 1 cut(s) 108
SmlI CTYRAG 1 cut(s) 185
SmoI CTYRAG 1 cut(s) 185
StyD4I CCNGG 4 cut(s) 105, 106, 144, 399
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 1 cut(s) 97
TaiI ACGT 2 cut(s) 42, 427
TaqI TCGA 3 cut(s) 21, 92, 186
TaqII GACCGA 1 cut(s) 364
TauI GCSGC 6 cut(s) 71, 152, 159, 175, 399, 445
Tru1I TTAA 1 cut(s) 487
Tru9I TTAA 1 cut(s) 487
TseI GCWGC 3 cut(s) 58, 181, 244
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 3 cut(s) 128, 283, 462
TspMI CCCGGG 1 cut(s) 106
VpaK11BI GGWCC 3 cut(s) 223, 376, 448
XhoI CTCGAG 1 cut(s) 185
XmaI CCCGGG 1 cut(s) 106
XmiI GTMKAC 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.