Rroxscaffold_102G00450920

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000102
OG0000098
Physical Location & Seq
Forward (+)
8863 .. 11241
2379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_102G00450920.1

Sequence Viewer

Length: 945 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTTATCCCCGTGGACACCTGCGTTATCTTTTAACGTATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGACCGGGACCCCCGTGCCCAGCCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGTGATCTGCACCGACGGCCGCTCCGCCCGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCTCGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGACGGGCCGAACGGGGAGCCCGCAGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCCGCCTACCATGATCGCGTCGACGACGTCTCCACGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

314

Amino Acids

33.51

Weight (kDa)

10.3

Isoelectric Point (pI)

69.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 96
AatII GACGTC 1 cut(s) 897
Acc36I ACCTGC 1 cut(s) 96
AccBSI CCGCTC 2 cut(s) 330, 660
AccI GTMKAC 2 cut(s) 257, 888
AccII CGCG 6 cut(s) 320, 339, 584, 700, 755, 885
AccIII TCCGGA 1 cut(s) 545
AclWI GGATC 4 cut(s) 34, 162, 429, 442
AcoI YGGCCR 5 cut(s) 311, 624, 655, 738, 925
AcyI GRCGYC 1 cut(s) 894
AfaI GTAC 2 cut(s) 244, 517
AfiI CCNNNNNNNGG 8 cut(s) 190, 216, 309, 622, 740, 776, 828, 923
AflII CTTAAG 1 cut(s) 758
AgsI TTSAA 2 cut(s) 266, 555
AjiI CACGTC 1 cut(s) 588
AjnI CCWGG 1 cut(s) 827
AluBI AGCT 1 cut(s) 348
AluI AGCT 1 cut(s) 348
Alw21I GWGCWC 2 cut(s) 598, 836
Alw26I GTCTC 3 cut(s) 490, 851, 901
AlwI GGATC 4 cut(s) 34, 162, 429, 442
Ama87I CYCGRG 3 cut(s) 271, 349, 423
Aor13HI TCCGGA 1 cut(s) 545
AoxI GGCC 7 cut(s) 311, 558, 624, 655, 738, 800, 925
ApeKI GCWGC 5 cut(s) 58, 345, 408, 688, 818
AspLEI GCGC 5 cut(s) 571, 702, 757, 765, 865
AspS9I GGNCC 7 cut(s) 181, 380, 386, 540, 558, 612, 800
AsuC2I CCSGG 8 cut(s) 152, 272, 273, 310, 384, 565, 667, 918
AsuHPI GGTGA 2 cut(s) 351, 480
AvaI CYCGRG 3 cut(s) 271, 349, 423
AvaII GGWCC 5 cut(s) 181, 380, 386, 540, 612
BaeGI GKGCMC 2 cut(s) 203, 398
BamHI GGATCC 1 cut(s) 434
BanII GRGCYC 2 cut(s) 722, 816
BbsI GAAGAC 1 cut(s) 136
Bbv12I GWGCWC 2 cut(s) 598, 836
BbvI GCAGC 5 cut(s) 45, 357, 420, 700, 830
BccI CCATC 1 cut(s) 774
BceAI ACGGC 6 cut(s) 616, 670, 753, 806, 876, 918
BciT130I CCWGG 1 cut(s) 829
BcnI CCSGG 8 cut(s) 152, 272, 273, 310, 384, 565, 667, 918
BcoDI GTCTC 3 cut(s) 490, 851, 901
BfaI CTAG 1 cut(s) 782
BfoI RGCGCY 1 cut(s) 766
BfrI CTTAAG 1 cut(s) 758
BfuAI ACCTGC 1 cut(s) 96
BglI GCCNNNNNGGC 3 cut(s) 566, 737, 860
Bme1390I CCNGG 9 cut(s) 152, 272, 273, 310, 384, 565, 667, 829, 918
Bme18I GGWCC 5 cut(s) 181, 380, 386, 540, 612
BmeT110I CYCGRG 3 cut(s) 271, 349, 423
BmgBI CACGTC 1 cut(s) 588
BmgT120I GGNCC 7 cut(s) 181, 380, 386, 540, 558, 612, 800
BmiI GGNNCC 6 cut(s) 182, 387, 388, 436, 614, 813
BmrFI CCNGG 9 cut(s) 152, 272, 273, 310, 384, 565, 667, 829, 918
BmrI ACTGGG 1 cut(s) 292
BmsI GCATC 2 cut(s) 493, 831
BmuI ACTGGG 1 cut(s) 292
BpiI GAAGAC 1 cut(s) 136
BpuMI CCSGG 8 cut(s) 152, 272, 273, 310, 384, 565, 667, 918
BsaHI GRCGYC 1 cut(s) 894
BsaI GGTCTC 1 cut(s) 490
BsaJI CCNNGG 8 cut(s) 79, 271, 308, 337, 424, 491, 564, 900
BsaWI WCCGGW 1 cut(s) 545
BsaXI ACNNNNNCTCC 6 cut(s) 604, 634, 644, 674, 881, 911
Bsc4I CCNNNNNNNGG 8 cut(s) 190, 216, 309, 622, 740, 776, 828, 923
Bse118I RCCGGY 2 cut(s) 521, 740
Bse1I ACTGG 3 cut(s) 246, 298, 638
BseAI TCCGGA 1 cut(s) 545
BseBI CCWGG 1 cut(s) 829
BseDI CCNNGG 8 cut(s) 79, 271, 308, 337, 424, 491, 564, 900
BseGI GGATG 1 cut(s) 766
BseLI CCNNNNNNNGG 8 cut(s) 190, 216, 309, 622, 740, 776, 828, 923
BseNI ACTGG 3 cut(s) 246, 298, 638
BseSI GKGCMC 2 cut(s) 203, 398
BseX3I CGGCCG 4 cut(s) 311, 624, 655, 738
BseXI GCAGC 5 cut(s) 45, 357, 420, 700, 830
BseYI CCCAGC 2 cut(s) 117, 397
BsgI GTGCAG 1 cut(s) 631
Bsh1236I CGCG 6 cut(s) 320, 339, 584, 700, 755, 885
Bsh1285I CGRYCG 7 cut(s) 261, 314, 522, 627, 658, 695, 741
BshFI GGCC 7 cut(s) 313, 560, 626, 657, 740, 802, 927
BsiEI CGRYCG 7 cut(s) 261, 314, 522, 627, 658, 695, 741
BsiHKAI GWGCWC 2 cut(s) 598, 836
BsiHKCI CYCGRG 3 cut(s) 271, 349, 423
BslFI GGGAC 2 cut(s) 290, 399
BslI CCNNNNNNNGG 8 cut(s) 190, 216, 309, 622, 740, 776, 828, 923
BsmAI GTCTC 3 cut(s) 490, 851, 901
BsmBI CGTCTC 2 cut(s) 851, 901
BsmFI GGGAC 2 cut(s) 290, 399
BsnI GGCC 7 cut(s) 313, 560, 626, 657, 740, 802, 927
Bso31I GGTCTC 1 cut(s) 490
BsoBI CYCGRG 3 cut(s) 271, 349, 423
Bsp1286I GDGCHC 6 cut(s) 203, 398, 598, 722, 816, 836
Bsp13I TCCGGA 1 cut(s) 545
Bsp143I GATC 5 cut(s) 26, 154, 434, 642, 880
BspANI GGCC 7 cut(s) 313, 560, 626, 657, 740, 802, 927
BspEI TCCGGA 1 cut(s) 545
BspFNI CGCG 6 cut(s) 320, 339, 584, 700, 755, 885
BspLI GGNNCC 6 cut(s) 182, 387, 388, 436, 614, 813
BspMI ACCTGC 1 cut(s) 96
BspPI GGATC 4 cut(s) 34, 162, 429, 442
BspQI GCTCTTC 2 cut(s) 4, 603
BspTI CTTAAG 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 490
BsrBI CCGCTC 2 cut(s) 330, 660
BsrFI RCCGGY 2 cut(s) 521, 740
BsrI ACTGG 3 cut(s) 246, 298, 638
BssAI RCCGGY 2 cut(s) 521, 740
BssECI CCNNGG 8 cut(s) 79, 271, 308, 337, 424, 491, 564, 900
BssMI GATC 5 cut(s) 26, 154, 434, 642, 880
BssNI GRCGYC 1 cut(s) 894
BssT1I CCWWGG 1 cut(s) 491
Bst2UI CCWGG 1 cut(s) 829
Bst4CI ACNGT 1 cut(s) 262
Bst6I CTCTTC 2 cut(s) 4, 603
BstACI GRCGYC 1 cut(s) 894
BstAFI CTTAAG 1 cut(s) 758
BstC8I GCNNGC 8 cut(s) 162, 318, 481, 607, 816, 836, 852, 867
BstDSI CCRYGG 3 cut(s) 79, 337, 900
BstF5I GGATG 1 cut(s) 766
BstFNI CGCG 6 cut(s) 320, 339, 584, 700, 755, 885
BstH2I RGCGCY 1 cut(s) 766
BstHHI GCGC 5 cut(s) 571, 702, 757, 765, 865
BstKTI GATC 5 cut(s) 29, 157, 437, 645, 883
BstMAI GTCTC 3 cut(s) 490, 851, 901
BstMBI GATC 5 cut(s) 26, 154, 434, 642, 880
BstMCI CGRYCG 7 cut(s) 261, 314, 522, 627, 658, 695, 741
BstNI CCWGG 1 cut(s) 829
BstNSI RCATGY 1 cut(s) 869
BstSCI CCNGG 9 cut(s) 150, 270, 271, 308, 382, 563, 665, 827, 916
BstSLI GKGCMC 2 cut(s) 203, 398
BstUI CGCG 6 cut(s) 320, 339, 584, 700, 755, 885
BstV1I GCAGC 5 cut(s) 45, 357, 420, 700, 830
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 1 cut(s) 434
BstXI CCANNNNNNTGG 1 cut(s) 609
BstYI RGATCY 1 cut(s) 434
BstZI CGGCCG 4 cut(s) 311, 624, 655, 738
BsuRI GGCC 7 cut(s) 313, 560, 626, 657, 740, 802, 927
BtgI CCRYGG 3 cut(s) 79, 337, 900
BtrI CACGTC 1 cut(s) 588
BtsCI GGATG 1 cut(s) 766
BtsI GCAGTG 2 cut(s) 177, 203
BtsIMutI CAGTG 3 cut(s) 177, 203, 645
BveI ACCTGC 1 cut(s) 96
Cac8I GCNNGC 8 cut(s) 162, 318, 481, 607, 816, 836, 852, 867
CfoI GCGC 5 cut(s) 571, 702, 757, 765, 865
Cfr10I RCCGGY 2 cut(s) 521, 740
Cfr13I GGNCC 7 cut(s) 181, 380, 386, 540, 558, 612, 800
Cfr42I CCGCGG 1 cut(s) 340
Cfr9I CCCGGG 1 cut(s) 271
CpoI CGGWCCG 1 cut(s) 380
CseI GACGC 1 cut(s) 874
Csp6I GTAC 2 cut(s) 243, 516
CspI CGGWCCG 1 cut(s) 380
CviAII CATG 2 cut(s) 866, 878
CviQI GTAC 2 cut(s) 243, 516
DpnI GATC 5 cut(s) 28, 156, 436, 644, 882
DpnII GATC 5 cut(s) 26, 154, 434, 642, 880
EaeI YGGCCR 5 cut(s) 311, 624, 655, 738, 925
EagI CGGCCG 4 cut(s) 311, 624, 655, 738
Eam1104I CTCTTC 2 cut(s) 4, 603
EarI CTCTTC 2 cut(s) 4, 603
EciI GGCGGA 2 cut(s) 137, 652
EclXI CGGCCG 4 cut(s) 311, 624, 655, 738
Eco130I CCWWGG 1 cut(s) 491
Eco24I GRGCYC 2 cut(s) 722, 816
Eco31I GGTCTC 1 cut(s) 490
Eco47I GGWCC 5 cut(s) 181, 380, 386, 540, 612
Eco52I CGGCCG 4 cut(s) 311, 624, 655, 738
Eco88I CYCGRG 3 cut(s) 271, 349, 423
EcoO109I RGGNCCY 1 cut(s) 386
EcoRII CCWGG 1 cut(s) 827
EcoT14I CCWWGG 1 cut(s) 491
EcoT38I GRGCYC 2 cut(s) 722, 816
ErhI CCWWGG 1 cut(s) 491
Esp3I CGTCTC 2 cut(s) 851, 901
FaeI CATG 2 cut(s) 869, 881
FaiI YATR 7 cut(s) 47, 108, 512, 746, 867, 879, 907
FalI AAGNNNNNCTT 2 cut(s) 159, 191
FaqI GGGAC 2 cut(s) 290, 399
FatI CATG 2 cut(s) 865, 877
FauI CCCGC 5 cut(s) 169, 211, 335, 614, 823
FblI GTMKAC 2 cut(s) 257, 888
FokI GGATG 1 cut(s) 753
FriOI GRGCYC 2 cut(s) 722, 816
FspBI CTAG 1 cut(s) 782
GlaI GCGC 5 cut(s) 570, 701, 756, 764, 864
GsaI CCCAGC 2 cut(s) 121, 401
HaeII RGCGCY 1 cut(s) 766
HaeIII GGCC 7 cut(s) 313, 560, 626, 657, 740, 802, 927
HgaI GACGC 1 cut(s) 874
HhaI GCGC 5 cut(s) 571, 702, 757, 765, 865
Hin1I GRCGYC 1 cut(s) 894
Hin1II CATG 2 cut(s) 869, 881
Hin6I GCGC 5 cut(s) 569, 700, 755, 763, 863
HinP1I GCGC 5 cut(s) 569, 700, 755, 763, 863
HincII GTYRAC 2 cut(s) 258, 889
HindII GTYRAC 2 cut(s) 258, 889
HinfI GANTC 4 cut(s) 212, 229, 254, 788
HphI GGTGA 2 cut(s) 351, 480
Hpy166II GTNNAC 5 cut(s) 83, 258, 359, 488, 889
Hpy188I TCNGA 4 cut(s) 211, 228, 253, 380
Hpy188III TCNNGA 2 cut(s) 423, 546
Hpy8I GTNNAC 5 cut(s) 83, 258, 359, 488, 889
Hpy99I CGWCG 8 cut(s) 44, 374, 589, 656, 739, 890, 893, 896
HpyAV CCTTC 2 cut(s) 17, 280
HpyCH4III ACNGT 1 cut(s) 262
HpyCH4IV ACGT 4 cut(s) 39, 104, 587, 894
HpyCH4V TGCA 2 cut(s) 648, 688
HpySE526I ACGT 4 cut(s) 39, 104, 587, 894
Hsp92I GRCGYC 1 cut(s) 894
Hsp92II CATG 2 cut(s) 869, 881
HspAI GCGC 5 cut(s) 569, 700, 755, 763, 863
KflI GGGWCCC 1 cut(s) 386
Kpn2I TCCGGA 1 cut(s) 545
KspI CCGCGG 1 cut(s) 340
Kzo9I GATC 5 cut(s) 26, 154, 434, 642, 880
LguI GCTCTTC 2 cut(s) 4, 603
LmnI GCTCC 4 cut(s) 289, 665, 811, 831
Lsp1109I GCAGC 5 cut(s) 45, 357, 420, 700, 830
LweI GCATC 2 cut(s) 493, 831
MaeI CTAG 1 cut(s) 782
MaeII ACGT 4 cut(s) 39, 104, 587, 894
MaeIII GTNAC 3 cut(s) 428, 749, 823
MalI GATC 5 cut(s) 28, 156, 436, 644, 882
MbiI CCGCTC 2 cut(s) 330, 660
MboI GATC 5 cut(s) 26, 154, 434, 642, 880
MboII GAAGA 3 cut(s) 21, 136, 590
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 6 cut(s) 203, 398, 598, 722, 816, 836
MlyI GAGTC 1 cut(s) 263
MnlI CCTC 7 cut(s) 184, 217, 414, 419, 553, 630, 714
MroI TCCGGA 1 cut(s) 545
MseI TTAA 2 cut(s) 101, 759
MslI CAYNNNNRTG 1 cut(s) 839
MspA1I CMGCKG 2 cut(s) 339, 609
MspCI CTTAAG 1 cut(s) 758
MspR9I CCNGG 9 cut(s) 152, 272, 273, 310, 384, 565, 667, 829, 918
MvaI CCWGG 1 cut(s) 829
MvnI CGCG 6 cut(s) 320, 339, 584, 700, 755, 885
NciI CCSGG 8 cut(s) 152, 272, 273, 310, 384, 565, 667, 918
NdeII GATC 5 cut(s) 26, 154, 434, 642, 880
NlaIII CATG 2 cut(s) 869, 881
NlaIV GGNNCC 6 cut(s) 182, 387, 388, 436, 614, 813
NmeAIII GCCGAG 3 cut(s) 652, 701, 880
NmuCI GTSAC 1 cut(s) 749
NspI RCATGY 1 cut(s) 869
PaeI GCATGC 1 cut(s) 869
PaeR7I CTCGAG 1 cut(s) 349
PaqCI CACCTGC 1 cut(s) 96
PciSI GCTCTTC 2 cut(s) 4, 603
PcsI WCGNNNNNNNCGW 1 cut(s) 842
PfeI GAWTC 3 cut(s) 212, 229, 788
PflFI GACNNNGTC 2 cut(s) 140, 893
PleI GAGTC 1 cut(s) 262
PpsI GAGTC 1 cut(s) 262
PpuMI RGGWCCY 1 cut(s) 386
Psp5II RGGWCCY 1 cut(s) 386
Psp6I CCWGG 1 cut(s) 827
PspFI CCCAGC 2 cut(s) 117, 397
PspGI CCWGG 1 cut(s) 827
PspN4I GGNNCC 6 cut(s) 182, 387, 388, 436, 614, 813
PspPI GGNCC 7 cut(s) 181, 380, 386, 540, 558, 612, 800
PspPPI RGGWCCY 1 cut(s) 386
PspXI VCTCGAGB 1 cut(s) 349
PsuI RGATCY 1 cut(s) 434
PsyI GACNNNGTC 2 cut(s) 140, 893
RsaI GTAC 2 cut(s) 244, 517
RsaNI GTAC 2 cut(s) 243, 516
RseI CAYNNNNRTG 1 cut(s) 839
Rsr2I CGGWCCG 1 cut(s) 380
RsrII CGGWCCG 1 cut(s) 380
SacII CCGCGG 1 cut(s) 340
SalI GTCGAC 2 cut(s) 256, 887
SapI GCTCTTC 2 cut(s) 4, 603
SaqAI TTAA 2 cut(s) 101, 759
Sau3AI GATC 5 cut(s) 26, 154, 434, 642, 880
Sau96I GGNCC 7 cut(s) 181, 380, 386, 540, 558, 612, 800
SchI GAGTC 1 cut(s) 263
ScrFI CCNGG 9 cut(s) 152, 272, 273, 310, 384, 565, 667, 829, 918
SduI GDGCHC 6 cut(s) 203, 398, 598, 722, 816, 836
SfaNI GCATC 2 cut(s) 493, 831
Sfr274I CTCGAG 1 cut(s) 349
Sfr303I CCGCGG 1 cut(s) 340
SgrBI CCGCGG 1 cut(s) 340
SgrDI CGTCGACG 1 cut(s) 887
SinI GGWCC 5 cut(s) 181, 380, 386, 540, 612
SlaI CTCGAG 1 cut(s) 349
SmaI CCCGGG 1 cut(s) 273
SmiMI CAYNNNNRTG 1 cut(s) 839
SmlI CTYRAG 2 cut(s) 349, 758
SmoI CTYRAG 2 cut(s) 349, 758
SphI GCATGC 1 cut(s) 869
SspMI CTAG 1 cut(s) 782
StyD4I CCNGG 9 cut(s) 150, 270, 271, 308, 382, 563, 665, 827, 916
StyI CCWWGG 1 cut(s) 491
TaaI ACNGT 1 cut(s) 262
TaiI ACGT 4 cut(s) 42, 107, 590, 897
TaqI TCGA 4 cut(s) 21, 257, 350, 888
TaqII GACCGA 1 cut(s) 528
TfiI GAWTC 3 cut(s) 212, 229, 788
Tru1I TTAA 2 cut(s) 101, 759
Tru9I TTAA 2 cut(s) 101, 759
TscAI CASTG 3 cut(s) 177, 203, 645
TseFI GTSAC 1 cut(s) 749
TseI GCWGC 5 cut(s) 58, 345, 408, 688, 818
Tsp45I GTSAC 1 cut(s) 749
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 5 cut(s) 230, 232, 292, 447, 930
TspMI CCCGGG 1 cut(s) 271
TspRI CASTG 3 cut(s) 177, 203, 645
Tth111I GACNNNGTC 2 cut(s) 140, 893
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 5 cut(s) 181, 380, 386, 540, 612
XceI RCATGY 1 cut(s) 869
XhoI CTCGAG 1 cut(s) 349
XmaI CCCGGG 1 cut(s) 271
XmiI GTMKAC 2 cut(s) 257, 888
XspI CTAG 1 cut(s) 782
ZraI GACGTC 1 cut(s) 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.