Rroxscaffold_45G00438930

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000045
OG0000098
Physical Location & Seq
Forward (+)
84290 .. 85492
1203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_45G00438930.1

Sequence Viewer

Length: 1014 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGAAAGCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

337

Amino Acids

36.93

Weight (kDa)

10.54

Isoelectric Point (pI)

53.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 914
AccB7I CCANNNNNTGG 1 cut(s) 953
AccBSI CCGCTC 1 cut(s) 676
AccI GTMKAC 2 cut(s) 550, 604
AccII CGCG 3 cut(s) 666, 685, 929
AccIII TCCGGA 1 cut(s) 891
AclI AACGTT 1 cut(s) 389
AclWI GGATC 5 cut(s) 34, 136, 318, 774, 787
AcoI YGGCCR 1 cut(s) 656
AcsI RAATTY 1 cut(s) 110
AcyI GRCGYC 1 cut(s) 915
AfaI GTAC 3 cut(s) 163, 591, 862
AfiI CCNNNNNNNGG 6 cut(s) 345, 371, 665, 953, 966, 982
AgsI TTSAA 2 cut(s) 613, 901
AjiI CACGTC 1 cut(s) 933
AjnI CCWGG 1 cut(s) 981
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 5 cut(s) 105, 186, 229, 480, 694
AluI AGCT 5 cut(s) 105, 186, 229, 480, 694
Alw21I GWGCWC 2 cut(s) 231, 943
Alw26I GTCTC 1 cut(s) 835
AlwI GGATC 5 cut(s) 34, 136, 318, 774, 787
AlwNI CAGNNNCTG 2 cut(s) 828, 953
Ama87I CYCGRG 4 cut(s) 618, 695, 751, 768
Aor13HI TCCGGA 1 cut(s) 891
AoxI GGCC 3 cut(s) 136, 656, 904
ApeKI GCWGC 2 cut(s) 58, 691
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 917
AspS9I GGNCC 5 cut(s) 336, 733, 886, 904, 956
AsuC2I CCSGG 6 cut(s) 308, 619, 620, 655, 868, 911
AsuHPI GGTGA 2 cut(s) 697, 825
AvaI CYCGRG 4 cut(s) 618, 695, 751, 768
AvaII GGWCC 4 cut(s) 336, 733, 886, 956
BaeGI GKGCMC 2 cut(s) 358, 745
BamHI GGATCC 1 cut(s) 779
BanI GGYRCC 1 cut(s) 914
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 483
Bbv12I GWGCWC 2 cut(s) 231, 943
BbvI GCAGC 2 cut(s) 45, 703
BceAI ACGGC 1 cut(s) 960
BciT130I CCWGG 1 cut(s) 983
BcnI CCSGG 6 cut(s) 308, 619, 620, 655, 868, 911
BcoDI GTCTC 1 cut(s) 835
BfaI CTAG 2 cut(s) 102, 470
BfoI RGCGCY 1 cut(s) 918
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 912
BisI GCNGC 7 cut(s) 59, 269, 667, 683, 692, 907, 951
BlpI GCTNAGC 1 cut(s) 971
BlsI GCNGC 7 cut(s) 60, 270, 668, 684, 693, 908, 952
Bme1390I CCNGG 7 cut(s) 308, 619, 620, 655, 868, 911, 983
Bme18I GGWCC 4 cut(s) 336, 733, 886, 956
BmeT110I CYCGRG 4 cut(s) 618, 695, 751, 768
BmgBI CACGTC 1 cut(s) 933
BmgT120I GGNCC 5 cut(s) 336, 733, 886, 904, 956
BmiI GGNNCC 7 cut(s) 337, 426, 734, 735, 781, 916, 958
BmrFI CCNGG 7 cut(s) 308, 619, 620, 655, 868, 911, 983
BmrI ACTGGG 2 cut(s) 638, 739
BmsI GCATC 1 cut(s) 838
BmuI ACTGGG 2 cut(s) 638, 739
BoxI GACNNNNGTC 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 292, 483
BplI GAGNNNNNCTC 2 cut(s) 464, 496
Bpu1102I GCTNAGC 1 cut(s) 971
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 6 cut(s) 308, 619, 620, 655, 868, 911
Bsa29I ATCGAT 1 cut(s) 131
BsaHI GRCGYC 1 cut(s) 915
BsaI GGTCTC 1 cut(s) 835
BsaJI CCNNGG 8 cut(s) 525, 618, 653, 683, 769, 836, 910, 982
BsaWI WCCGGW 1 cut(s) 891
BsaXI ACNNNNNCTCC 2 cut(s) 948, 978
Bsc4I CCNNNNNNNGG 6 cut(s) 345, 371, 665, 953, 966, 982
Bse118I RCCGGY 1 cut(s) 658
Bse1I ACTGG 5 cut(s) 69, 169, 593, 644, 734
BseAI TCCGGA 1 cut(s) 891
BseBI CCWGG 1 cut(s) 983
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 8 cut(s) 525, 618, 653, 683, 769, 836, 910, 982
BseLI CCNNNNNNNGG 6 cut(s) 345, 371, 665, 953, 966, 982
BseMII CTCAG 2 cut(s) 590, 962
BseNI ACTGG 5 cut(s) 69, 169, 593, 644, 734
BseSI GKGCMC 2 cut(s) 358, 745
BseX3I CGGCCG 1 cut(s) 656
BseXI GCAGC 2 cut(s) 45, 703
BseYI CCCAGC 2 cut(s) 273, 744
Bsh1236I CGCG 3 cut(s) 666, 685, 929
Bsh1285I CGRYCG 2 cut(s) 659, 867
BshFI GGCC 3 cut(s) 138, 658, 906
BshNI GGYRCC 1 cut(s) 914
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 659, 867
BsiHKAI GWGCWC 2 cut(s) 231, 943
BsiHKCI CYCGRG 4 cut(s) 618, 695, 751, 768
BsiSI CCGG 9 cut(s) 308, 619, 655, 659, 867, 892, 910, 918, 967
BslFI GGGAC 4 cut(s) 570, 636, 740, 746
BslI CCNNNNNNNGG 6 cut(s) 345, 371, 665, 953, 966, 982
BsmAI GTCTC 1 cut(s) 835
BsmFI GGGAC 4 cut(s) 570, 636, 740, 746
BsnI GGCC 3 cut(s) 138, 658, 906
Bso31I GGTCTC 1 cut(s) 835
BsoBI CYCGRG 4 cut(s) 618, 695, 751, 768
Bsp1286I GDGCHC 4 cut(s) 231, 358, 745, 943
Bsp13I TCCGGA 1 cut(s) 891
Bsp143I GATC 4 cut(s) 26, 128, 310, 779
Bsp1720I GCTNAGC 1 cut(s) 971
BspANI GGCC 3 cut(s) 138, 658, 906
BspCNI CTCAG 2 cut(s) 591, 963
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 891
BspFNI CGCG 3 cut(s) 666, 685, 929
BspLI GGNNCC 7 cut(s) 337, 426, 734, 735, 781, 916, 958
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 774, 787
BspQI GCTCTTC 2 cut(s) 4, 948
BspT107I GGYRCC 1 cut(s) 914
BspTNI GGTCTC 1 cut(s) 835
BsrBI CCGCTC 1 cut(s) 676
BsrFI RCCGGY 1 cut(s) 658
BsrI ACTGG 5 cut(s) 69, 169, 593, 644, 734
BssAI RCCGGY 1 cut(s) 658
BssECI CCNNGG 8 cut(s) 525, 618, 653, 683, 769, 836, 910, 982
BssMI GATC 4 cut(s) 26, 128, 310, 779
BssNI GRCGYC 1 cut(s) 915
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 525, 836
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 1 cut(s) 983
Bst4CI ACNGT 3 cut(s) 151, 561, 609
Bst6I CTCTTC 2 cut(s) 4, 948
BstACI GRCGYC 1 cut(s) 915
BstC8I GCNNGC 5 cut(s) 318, 328, 660, 664, 993
BstDEI CTNAG 3 cut(s) 235, 599, 971
BstDSI CCRYGG 1 cut(s) 683
BstFNI CGCG 3 cut(s) 666, 685, 929
BstH2I RGCGCY 1 cut(s) 918
BstHHI GCGC 1 cut(s) 917
BstKTI GATC 4 cut(s) 29, 131, 313, 782
BstMAI GTCTC 1 cut(s) 835
BstMBI GATC 4 cut(s) 26, 128, 310, 779
BstMCI CGRYCG 2 cut(s) 659, 867
BstNI CCWGG 1 cut(s) 983
BstPAI GACNNNNGTC 1 cut(s) 472
BstSCI CCNGG 7 cut(s) 306, 617, 618, 653, 866, 909, 981
BstSLI GKGCMC 2 cut(s) 358, 745
BstUI CGCG 3 cut(s) 666, 685, 929
BstV1I GCAGC 2 cut(s) 45, 703
BstV2I GAAGAC 2 cut(s) 292, 483
BstX2I RGATCY 1 cut(s) 779
BstYI RGATCY 1 cut(s) 779
BstZI CGGCCG 1 cut(s) 656
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 658, 906
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 683
BtrI CACGTC 1 cut(s) 933
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 2 cut(s) 358, 566
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 5 cut(s) 318, 328, 660, 664, 993
CaiI CAGNNNCTG 2 cut(s) 828, 953
CfoI GCGC 1 cut(s) 917
Cfr10I RCCGGY 1 cut(s) 658
Cfr13I GGNCC 5 cut(s) 336, 733, 886, 904, 956
Cfr42I CCGCGG 1 cut(s) 686
Cfr9I CCCGGG 1 cut(s) 618
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 590, 861
CviQI GTAC 3 cut(s) 162, 590, 861
DdeI CTNAG 3 cut(s) 235, 599, 971
DinI GGCGCC 1 cut(s) 916
DpnI GATC 4 cut(s) 28, 130, 312, 781
DpnII GATC 4 cut(s) 26, 128, 310, 779
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 656
EagI CGGCCG 1 cut(s) 656
Eam1104I CTCTTC 2 cut(s) 4, 948
EarI CTCTTC 2 cut(s) 4, 948
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 656
Eco130I CCWWGG 2 cut(s) 525, 836
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 835
Eco47I GGWCC 4 cut(s) 336, 733, 886, 956
Eco52I CGGCCG 1 cut(s) 656
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 618, 695, 751, 768
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 733
EcoRII CCWGG 1 cut(s) 981
EcoT14I CCWWGG 2 cut(s) 525, 836
EcoT38I GRGCYC 1 cut(s) 231
EgeI GGCGCC 1 cut(s) 916
EheI GGCGCC 1 cut(s) 916
ErhI CCWWGG 2 cut(s) 525, 836
FaiI YATR 3 cut(s) 47, 435, 857
FaqI GGGAC 4 cut(s) 570, 636, 740, 746
FauI CCCGC 4 cut(s) 325, 366, 508, 681
FblI GTMKAC 2 cut(s) 550, 604
Fnu4HI GCNGC 7 cut(s) 59, 269, 667, 683, 692, 907, 951
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 7 cut(s) 59, 269, 667, 683, 692, 907, 951
FspBI CTAG 2 cut(s) 102, 470
GlaI GCGC 1 cut(s) 916
GluI GCNGC 7 cut(s) 59, 269, 667, 683, 692, 907, 951
GsaI CCCAGC 2 cut(s) 277, 748
HaeII RGCGCY 1 cut(s) 918
HaeIII GGCC 3 cut(s) 138, 658, 906
HapII CCGG 9 cut(s) 308, 619, 655, 659, 867, 892, 910, 918, 967
HhaI GCGC 1 cut(s) 917
Hin1I GRCGYC 1 cut(s) 915
Hin6I GCGC 1 cut(s) 915
HinP1I GCGC 1 cut(s) 915
HincII GTYRAC 1 cut(s) 605
HindII GTYRAC 1 cut(s) 605
HinfI GANTC 7 cut(s) 175, 367, 473, 506, 566, 576, 601
HpaII CCGG 9 cut(s) 308, 619, 655, 659, 867, 892, 910, 918, 967
HphI GGTGA 2 cut(s) 697, 825
Hpy166II GTNNAC 4 cut(s) 551, 605, 705, 833
Hpy188I TCNGA 6 cut(s) 94, 174, 366, 467, 575, 600
Hpy188III TCNNGA 3 cut(s) 725, 768, 892
Hpy8I GTNNAC 4 cut(s) 551, 605, 705, 833
Hpy99I CGWCG 3 cut(s) 44, 720, 934
HpyAV CCTTC 3 cut(s) 17, 415, 626
HpyCH4III ACNGT 3 cut(s) 151, 561, 609
HpyCH4IV ACGT 3 cut(s) 39, 389, 932
HpyF3I CTNAG 3 cut(s) 235, 599, 971
HpySE526I ACGT 3 cut(s) 39, 389, 932
Hsp92I GRCGYC 1 cut(s) 915
HspAI GCGC 1 cut(s) 915
KasI GGCGCC 1 cut(s) 914
KflI GGGWCCC 1 cut(s) 733
Kpn2I TCCGGA 1 cut(s) 891
KroI GCCGGC 1 cut(s) 658
KroNI GCCGGC 1 cut(s) 660
KspI CCGCGG 1 cut(s) 686
Kzo9I GATC 4 cut(s) 26, 128, 310, 779
LguI GCTCTTC 2 cut(s) 4, 948
LmnI GCTCC 2 cut(s) 430, 635
Lsp1109I GCAGC 2 cut(s) 45, 703
LweI GCATC 1 cut(s) 838
MaeI CTAG 2 cut(s) 102, 470
MaeII ACGT 3 cut(s) 39, 389, 932
MaeIII GTNAC 2 cut(s) 83, 773
MalI GATC 4 cut(s) 28, 130, 312, 781
MbiI CCGCTC 1 cut(s) 676
MboI GATC 4 cut(s) 26, 128, 310, 779
MboII GAAGA 4 cut(s) 21, 292, 483, 935
MflI RGATCY 1 cut(s) 779
MhlI GDGCHC 4 cut(s) 231, 358, 745, 943
MluCI AATT 1 cut(s) 110
Mly113I GGCGCC 1 cut(s) 915
MlyI GAGTC 2 cut(s) 482, 610
MmeI TCCRAC 1 cut(s) 445
MnlI CCTC 9 cut(s) 109, 339, 372, 453, 760, 764, 818, 899, 974
MroI TCCGGA 1 cut(s) 891
MroNI GCCGGC 1 cut(s) 658
MseI TTAA 4 cut(s) 108, 257, 392, 999
MspA1I CMGCKG 3 cut(s) 503, 685, 953
MspI CCGG 9 cut(s) 308, 619, 655, 659, 867, 892, 910, 918, 967
MspR9I CCNGG 7 cut(s) 308, 619, 620, 655, 868, 911, 983
MvaI CCWGG 1 cut(s) 983
MvnI CGCG 3 cut(s) 666, 685, 929
NaeI GCCGGC 1 cut(s) 660
NarI GGCGCC 1 cut(s) 915
NciI CCSGG 6 cut(s) 308, 619, 620, 655, 868, 911
NdeII GATC 4 cut(s) 26, 128, 310, 779
NgoMIV GCCGGC 1 cut(s) 658
NlaIV GGNNCC 7 cut(s) 337, 426, 734, 735, 781, 916, 958
PaeR7I CTCGAG 2 cut(s) 695, 751
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 948
PdiI GCCGGC 1 cut(s) 660
PfeI GAWTC 5 cut(s) 175, 367, 506, 566, 576
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 953
PkrI GCNGC 7 cut(s) 60, 270, 668, 684, 693, 908, 952
PleI GAGTC 2 cut(s) 481, 609
PluTI GGCGCC 1 cut(s) 918
PpsI GAGTC 2 cut(s) 481, 609
PpuMI RGGWCCY 1 cut(s) 733
PshAI GACNNNNGTC 1 cut(s) 472
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 733
Psp6I CCWGG 1 cut(s) 981
PspFI CCCAGC 2 cut(s) 273, 744
PspGI CCWGG 1 cut(s) 981
PspN4I GGNNCC 7 cut(s) 337, 426, 734, 735, 781, 916, 958
PspPI GGNCC 5 cut(s) 336, 733, 886, 904, 956
PspPPI RGGWCCY 1 cut(s) 733
PspXI VCTCGAGB 2 cut(s) 695, 751
PstNI CAGNNNCTG 2 cut(s) 828, 953
PsuI RGATCY 1 cut(s) 779
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 591, 862
RsaNI GTAC 3 cut(s) 162, 590, 861
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 686
SalI GTCGAC 1 cut(s) 603
SapI GCTCTTC 2 cut(s) 4, 948
SaqAI TTAA 4 cut(s) 108, 257, 392, 999
SatI GCNGC 7 cut(s) 59, 269, 667, 683, 692, 907, 951
Sau3AI GATC 4 cut(s) 26, 128, 310, 779
Sau96I GGNCC 5 cut(s) 336, 733, 886, 904, 956
SchI GAGTC 2 cut(s) 482, 610
ScrFI CCNGG 7 cut(s) 308, 619, 620, 655, 868, 911, 983
SduI GDGCHC 4 cut(s) 231, 358, 745, 943
SfaNI GCATC 1 cut(s) 838
SfoI GGCGCC 1 cut(s) 916
Sfr274I CTCGAG 2 cut(s) 695, 751
Sfr303I CCGCGG 1 cut(s) 686
SgrBI CCGCGG 1 cut(s) 686
SinI GGWCC 4 cut(s) 336, 733, 886, 956
SlaI CTCGAG 2 cut(s) 695, 751
SmaI CCCGGG 1 cut(s) 620
SmlI CTYRAG 3 cut(s) 446, 695, 751
SmoI CTYRAG 3 cut(s) 446, 695, 751
Sse9I AATT 1 cut(s) 110
SspDI GGCGCC 1 cut(s) 914
SspMI CTAG 2 cut(s) 102, 470
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 7 cut(s) 306, 617, 618, 653, 866, 909, 981
StyI CCWWGG 2 cut(s) 525, 836
TaaI ACNGT 3 cut(s) 151, 561, 609
TaiI ACGT 3 cut(s) 42, 392, 935
TaqI TCGA 5 cut(s) 21, 131, 604, 696, 752
TaqII GACCGA 1 cut(s) 874
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 669, 685, 909, 953
TfiI GAWTC 5 cut(s) 175, 367, 506, 566, 576
Tru1I TTAA 4 cut(s) 108, 257, 392, 999
Tru9I TTAA 4 cut(s) 108, 257, 392, 999
TscAI CASTG 2 cut(s) 358, 566
TseI GCWGC 2 cut(s) 58, 691
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 387, 577, 638, 792
TspMI CCCGGG 1 cut(s) 618
TspRI CASTG 2 cut(s) 358, 566
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 953
VpaK11BI GGWCC 4 cut(s) 336, 733, 886, 956
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 695, 751
XmaI CCCGGG 1 cut(s) 618
XmiI GTMKAC 2 cut(s) 550, 604
XspI CTAG 2 cut(s) 102, 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.