Rroxscaffold_104G00444900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000104
OG0000098
Physical Location & Seq
Reverse (-)
85954 .. 87581
1628 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_104G00444900.1

Sequence Viewer

Length: 1023 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGATCTGCACCGACGGCCGCTCCGCCCGGGCTCACGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

340

Amino Acids

36.07

Weight (kDa)

10.12

Isoelectric Point (pI)

56.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 252, 989
Acc36I ACCTGC 2 cut(s) 252, 989
AccBSI CCGCTC 2 cut(s) 666, 861
AccI GTMKAC 2 cut(s) 550, 593
AccII CGCG 4 cut(s) 656, 675, 902, 959
AclI AACGTT 1 cut(s) 389
AclWI GGATC 5 cut(s) 34, 136, 318, 765, 778
AcoI YGGCCR 3 cut(s) 646, 856, 940
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 2 cut(s) 163, 580
AfiI CCNNNNNNNGG 5 cut(s) 345, 371, 655, 942, 980
AflII CTTAAG 1 cut(s) 962
AgsI TTSAA 1 cut(s) 602
AjnI CCWGG 2 cut(s) 880, 922
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 5 cut(s) 105, 186, 229, 480, 684
AluI AGCT 5 cut(s) 105, 186, 229, 480, 684
Alw21I GWGCWC 1 cut(s) 231
Alw26I GTCTC 1 cut(s) 826
AlwI GGATC 5 cut(s) 34, 136, 318, 765, 778
AlwNI CAGNNNCTG 1 cut(s) 819
Ama87I CYCGRG 4 cut(s) 607, 685, 759, 867
AoxI GGCC 5 cut(s) 136, 646, 856, 920, 940
ApeKI GCWGC 3 cut(s) 58, 681, 890
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 3 cut(s) 904, 961, 969
AspS9I GGNCC 3 cut(s) 336, 723, 920
AsuC2I CCSGG 7 cut(s) 308, 608, 609, 645, 868, 869, 944
AsuHPI GGTGA 3 cut(s) 687, 816, 1013
AvaI CYCGRG 4 cut(s) 607, 685, 759, 867
AvaII GGWCC 2 cut(s) 336, 723
BaeGI GKGCMC 2 cut(s) 358, 735
BamHI GGATCC 1 cut(s) 770
BanII GRGCYC 2 cut(s) 231, 874
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 483
Bbv12I GWGCWC 1 cut(s) 231
BbvI GCAGC 3 cut(s) 45, 693, 902
BccI CCATC 1 cut(s) 978
BceAI ACGGC 2 cut(s) 871, 955
BciT130I CCWGG 2 cut(s) 882, 924
BcnI CCSGG 7 cut(s) 308, 608, 609, 645, 868, 869, 944
BcoDI GTCTC 1 cut(s) 826
BfaI CTAG 3 cut(s) 102, 470, 986
BfoI RGCGCY 1 cut(s) 970
BfrI CTTAAG 1 cut(s) 962
BfuAI ACCTGC 2 cut(s) 252, 989
BglI GCCNNNNNGGC 1 cut(s) 939
BisI GCNGC 8 cut(s) 59, 269, 657, 673, 682, 859, 891, 900
BlsI GCNGC 8 cut(s) 60, 270, 658, 674, 683, 860, 892, 901
Bme1390I CCNGG 9 cut(s) 308, 608, 609, 645, 868, 869, 882, 924, 944
Bme18I GGWCC 2 cut(s) 336, 723
BmeT110I CYCGRG 4 cut(s) 607, 685, 759, 867
BmgT120I GGNCC 3 cut(s) 336, 723, 920
BmiI GGNNCC 6 cut(s) 337, 426, 724, 725, 772, 921
BmrFI CCNGG 9 cut(s) 308, 608, 609, 645, 868, 869, 882, 924, 944
BmrI ACTGGG 2 cut(s) 628, 729
BmsI GCATC 1 cut(s) 829
BmuI ACTGGG 2 cut(s) 628, 729
BoxI GACNNNNGTC 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 292, 483
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 7 cut(s) 308, 608, 609, 645, 868, 869, 944
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 826
BsaJI CCNNGG 9 cut(s) 525, 607, 643, 673, 760, 827, 867, 880, 943
BsaXI ACNNNNNCTCC 2 cut(s) 845, 875
Bsc4I CCNNNNNNNGG 5 cut(s) 345, 371, 655, 942, 980
Bse118I RCCGGY 1 cut(s) 648
Bse1I ACTGG 5 cut(s) 69, 169, 582, 634, 724
BseBI CCWGG 2 cut(s) 882, 924
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 9 cut(s) 525, 607, 643, 673, 760, 827, 867, 880, 943
BseGI GGATG 1 cut(s) 970
BseLI CCNNNNNNNGG 5 cut(s) 345, 371, 655, 942, 980
BseMII CTCAG 2 cut(s) 579, 755
BseNI ACTGG 5 cut(s) 69, 169, 582, 634, 724
BseSI GKGCMC 2 cut(s) 358, 735
BseX3I CGGCCG 3 cut(s) 646, 856, 940
BseXI GCAGC 3 cut(s) 45, 693, 902
BseYI CCCAGC 2 cut(s) 273, 734
BsgI GTGCAG 1 cut(s) 832
Bsh1236I CGCG 4 cut(s) 656, 675, 902, 959
Bsh1285I CGRYCG 4 cut(s) 649, 859, 897, 943
BshFI GGCC 5 cut(s) 138, 648, 858, 922, 942
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 4 cut(s) 649, 859, 897, 943
BsiHKAI GWGCWC 1 cut(s) 231
BsiHKCI CYCGRG 4 cut(s) 607, 685, 759, 867
BsiSI CCGG 6 cut(s) 308, 608, 645, 649, 868, 943
BslFI GGGAC 4 cut(s) 570, 626, 730, 736
BslI CCNNNNNNNGG 5 cut(s) 345, 371, 655, 942, 980
BsmAI GTCTC 1 cut(s) 826
BsmFI GGGAC 4 cut(s) 570, 626, 730, 736
BsnI GGCC 5 cut(s) 138, 648, 858, 922, 942
Bso31I GGTCTC 1 cut(s) 826
BsoBI CYCGRG 4 cut(s) 607, 685, 759, 867
Bsp1286I GDGCHC 4 cut(s) 231, 358, 735, 874
Bsp143I GATC 5 cut(s) 26, 128, 310, 770, 843
BspANI GGCC 5 cut(s) 138, 648, 858, 922, 942
BspCNI CTCAG 2 cut(s) 580, 754
BspDI ATCGAT 1 cut(s) 131
BspFNI CGCG 4 cut(s) 656, 675, 902, 959
BspLI GGNNCC 6 cut(s) 337, 426, 724, 725, 772, 921
BspMI ACCTGC 2 cut(s) 252, 989
BspPI GGATC 5 cut(s) 34, 136, 318, 765, 778
BspQI GCTCTTC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 962
BspTNI GGTCTC 1 cut(s) 826
BsrBI CCGCTC 2 cut(s) 666, 861
BsrFI RCCGGY 1 cut(s) 648
BsrI ACTGG 5 cut(s) 69, 169, 582, 634, 724
BssAI RCCGGY 1 cut(s) 648
BssECI CCNNGG 9 cut(s) 525, 607, 643, 673, 760, 827, 867, 880, 943
BssMI GATC 5 cut(s) 26, 128, 310, 770, 843
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 525, 827
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 2 cut(s) 882, 924
Bst4CI ACNGT 2 cut(s) 151, 598
Bst6I CTCTTC 1 cut(s) 4
BstAFI CTTAAG 1 cut(s) 962
BstC8I GCNNGC 4 cut(s) 318, 328, 650, 654
BstDEI CTNAG 4 cut(s) 235, 588, 741, 1020
BstDSI CCRYGG 1 cut(s) 673
BstF5I GGATG 1 cut(s) 970
BstFNI CGCG 4 cut(s) 656, 675, 902, 959
BstH2I RGCGCY 1 cut(s) 970
BstHHI GCGC 3 cut(s) 904, 961, 969
BstKTI GATC 5 cut(s) 29, 131, 313, 773, 846
BstMAI GTCTC 1 cut(s) 826
BstMBI GATC 5 cut(s) 26, 128, 310, 770, 843
BstMCI CGRYCG 4 cut(s) 649, 859, 897, 943
BstNI CCWGG 2 cut(s) 882, 924
BstPAI GACNNNNGTC 1 cut(s) 472
BstSCI CCNGG 9 cut(s) 306, 606, 607, 643, 866, 867, 880, 922, 942
BstSLI GKGCMC 2 cut(s) 358, 735
BstUI CGCG 4 cut(s) 656, 675, 902, 959
BstV1I GCAGC 3 cut(s) 45, 693, 902
BstV2I GAAGAC 2 cut(s) 292, 483
BstX2I RGATCY 1 cut(s) 770
BstYI RGATCY 1 cut(s) 770
BstZI CGGCCG 3 cut(s) 646, 856, 940
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 5 cut(s) 138, 648, 858, 922, 942
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 673
BtsCI GGATG 1 cut(s) 970
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 1 cut(s) 358
BveI ACCTGC 2 cut(s) 252, 989
Cac8I GCNNGC 4 cut(s) 318, 328, 650, 654
CaiI CAGNNNCTG 1 cut(s) 819
CfoI GCGC 3 cut(s) 904, 961, 969
Cfr10I RCCGGY 1 cut(s) 648
Cfr13I GGNCC 3 cut(s) 336, 723, 920
Cfr42I CCGCGG 1 cut(s) 676
Cfr9I CCCGGG 2 cut(s) 607, 867
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 2 cut(s) 162, 579
CviQI GTAC 2 cut(s) 162, 579
DdeI CTNAG 4 cut(s) 235, 588, 741, 1020
DpnI GATC 5 cut(s) 28, 130, 312, 772, 845
DpnII GATC 5 cut(s) 26, 128, 310, 770, 843
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 3 cut(s) 646, 856, 940
EagI CGGCCG 3 cut(s) 646, 856, 940
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 2 cut(s) 293, 853
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 3 cut(s) 646, 856, 940
Eco130I CCWWGG 2 cut(s) 525, 827
Eco24I GRGCYC 2 cut(s) 231, 874
Eco31I GGTCTC 1 cut(s) 826
Eco47I GGWCC 2 cut(s) 336, 723
Eco52I CGGCCG 3 cut(s) 646, 856, 940
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 607, 685, 759, 867
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 2 cut(s) 723, 920
EcoRII CCWGG 2 cut(s) 880, 922
EcoT14I CCWWGG 2 cut(s) 525, 827
EcoT38I GRGCYC 2 cut(s) 231, 874
ErhI CCWWGG 2 cut(s) 525, 827
FaiI YATR 3 cut(s) 47, 435, 950
FaqI GGGAC 4 cut(s) 570, 626, 730, 736
FauI CCCGC 4 cut(s) 325, 366, 508, 671
FblI GTMKAC 2 cut(s) 550, 593
Fnu4HI GCNGC 8 cut(s) 59, 269, 657, 673, 682, 859, 891, 900
FokI GGATG 1 cut(s) 957
FriOI GRGCYC 2 cut(s) 231, 874
Fsp4HI GCNGC 8 cut(s) 59, 269, 657, 673, 682, 859, 891, 900
FspBI CTAG 3 cut(s) 102, 470, 986
GlaI GCGC 3 cut(s) 903, 960, 968
GluI GCNGC 8 cut(s) 59, 269, 657, 673, 682, 859, 891, 900
GsaI CCCAGC 2 cut(s) 277, 738
HaeII RGCGCY 1 cut(s) 970
HaeIII GGCC 5 cut(s) 138, 648, 858, 922, 942
HapII CCGG 6 cut(s) 308, 608, 645, 649, 868, 943
HhaI GCGC 3 cut(s) 904, 961, 969
Hin6I GCGC 3 cut(s) 902, 959, 967
HinP1I GCGC 3 cut(s) 902, 959, 967
HincII GTYRAC 1 cut(s) 594
HindII GTYRAC 1 cut(s) 594
HinfI GANTC 7 cut(s) 175, 367, 473, 506, 565, 590, 992
HpaII CCGG 6 cut(s) 308, 608, 645, 649, 868, 943
HphI GGTGA 3 cut(s) 687, 816, 1013
Hpy166II GTNNAC 4 cut(s) 551, 594, 695, 824
Hpy188I TCNGA 7 cut(s) 94, 174, 366, 467, 564, 589, 744
Hpy188III TCNNGA 2 cut(s) 715, 759
Hpy8I GTNNAC 4 cut(s) 551, 594, 695, 824
Hpy99I CGWCG 4 cut(s) 44, 710, 857, 941
HpyAV CCTTC 3 cut(s) 17, 415, 616
HpyCH4III ACNGT 2 cut(s) 151, 598
HpyCH4IV ACGT 2 cut(s) 39, 389
HpyCH4V TGCA 2 cut(s) 849, 890
HpyF3I CTNAG 4 cut(s) 235, 588, 741, 1020
HpySE526I ACGT 2 cut(s) 39, 389
HspAI GCGC 3 cut(s) 902, 959, 967
KflI GGGWCCC 1 cut(s) 723
KroI GCCGGC 1 cut(s) 648
KroNI GCCGGC 1 cut(s) 650
KspI CCGCGG 1 cut(s) 676
Kzo9I GATC 5 cut(s) 26, 128, 310, 770, 843
LguI GCTCTTC 1 cut(s) 4
LmnI GCTCC 3 cut(s) 430, 625, 866
Lsp1109I GCAGC 3 cut(s) 45, 693, 902
LweI GCATC 1 cut(s) 829
MaeI CTAG 3 cut(s) 102, 470, 986
MaeII ACGT 2 cut(s) 39, 389
MaeIII GTNAC 4 cut(s) 83, 764, 953, 1008
MalI GATC 5 cut(s) 28, 130, 312, 772, 845
MbiI CCGCTC 2 cut(s) 666, 861
MboI GATC 5 cut(s) 26, 128, 310, 770, 843
MboII GAAGA 3 cut(s) 21, 292, 483
MflI RGATCY 1 cut(s) 770
MhlI GDGCHC 4 cut(s) 231, 358, 735, 874
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 482, 599
MmeI TCCRAC 1 cut(s) 445
MnlI CCTC 8 cut(s) 109, 339, 372, 453, 750, 755, 809, 916
MroNI GCCGGC 1 cut(s) 648
MseI TTAA 4 cut(s) 108, 257, 392, 963
MspA1I CMGCKG 2 cut(s) 503, 675
MspCI CTTAAG 1 cut(s) 962
MspI CCGG 6 cut(s) 308, 608, 645, 649, 868, 943
MspR9I CCNGG 9 cut(s) 308, 608, 609, 645, 868, 869, 882, 924, 944
MvaI CCWGG 2 cut(s) 882, 924
MvnI CGCG 4 cut(s) 656, 675, 902, 959
NaeI GCCGGC 1 cut(s) 650
NciI CCSGG 7 cut(s) 308, 608, 609, 645, 868, 869, 944
NdeII GATC 5 cut(s) 26, 128, 310, 770, 843
NgoMIV GCCGGC 1 cut(s) 648
NlaIV GGNNCC 6 cut(s) 337, 426, 724, 725, 772, 921
NmuCI GTSAC 1 cut(s) 953
PaeR7I CTCGAG 1 cut(s) 685
PaqCI CACCTGC 2 cut(s) 252, 989
PciSI GCTCTTC 1 cut(s) 4
PdiI GCCGGC 1 cut(s) 650
PfeI GAWTC 5 cut(s) 175, 367, 506, 565, 992
PflFI GACNNNGTC 1 cut(s) 296
PkrI GCNGC 8 cut(s) 60, 270, 658, 674, 683, 860, 892, 901
PleI GAGTC 2 cut(s) 481, 598
PpsI GAGTC 2 cut(s) 481, 598
PpuMI RGGWCCY 1 cut(s) 723
PshAI GACNNNNGTC 1 cut(s) 472
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 723
Psp6I CCWGG 2 cut(s) 880, 922
PspFI CCCAGC 2 cut(s) 273, 734
PspGI CCWGG 2 cut(s) 880, 922
PspN4I GGNNCC 6 cut(s) 337, 426, 724, 725, 772, 921
PspPI GGNCC 3 cut(s) 336, 723, 920
PspPPI RGGWCCY 1 cut(s) 723
PspXI VCTCGAGB 1 cut(s) 685
PstNI CAGNNNCTG 1 cut(s) 819
PsuI RGATCY 1 cut(s) 770
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 2 cut(s) 163, 580
RsaNI GTAC 2 cut(s) 162, 579
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 676
SalI GTCGAC 1 cut(s) 592
SapI GCTCTTC 1 cut(s) 4
SaqAI TTAA 4 cut(s) 108, 257, 392, 963
SatI GCNGC 8 cut(s) 59, 269, 657, 673, 682, 859, 891, 900
Sau3AI GATC 5 cut(s) 26, 128, 310, 770, 843
Sau96I GGNCC 3 cut(s) 336, 723, 920
SchI GAGTC 2 cut(s) 482, 599
ScrFI CCNGG 9 cut(s) 308, 608, 609, 645, 868, 869, 882, 924, 944
SduI GDGCHC 4 cut(s) 231, 358, 735, 874
SfaNI GCATC 1 cut(s) 829
Sfr274I CTCGAG 1 cut(s) 685
Sfr303I CCGCGG 1 cut(s) 676
SgrBI CCGCGG 1 cut(s) 676
SinI GGWCC 2 cut(s) 336, 723
SlaI CTCGAG 1 cut(s) 685
SmaI CCCGGG 2 cut(s) 609, 869
SmlI CTYRAG 3 cut(s) 446, 685, 962
SmoI CTYRAG 3 cut(s) 446, 685, 962
SrfI GCCCGGGC 1 cut(s) 869
Sse9I AATT 1 cut(s) 110
SspMI CTAG 3 cut(s) 102, 470, 986
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 9 cut(s) 306, 606, 607, 643, 866, 867, 880, 922, 942
StyI CCWWGG 2 cut(s) 525, 827
TaaI ACNGT 2 cut(s) 151, 598
TaiI ACGT 2 cut(s) 42, 392
TaqI TCGA 4 cut(s) 21, 131, 593, 686
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 659, 675, 861, 902
TfiI GAWTC 5 cut(s) 175, 367, 506, 565, 992
Tru1I TTAA 4 cut(s) 108, 257, 392, 963
Tru9I TTAA 4 cut(s) 108, 257, 392, 963
TscAI CASTG 1 cut(s) 358
TseFI GTSAC 1 cut(s) 953
TseI GCWGC 3 cut(s) 58, 681, 890
Tsp45I GTSAC 1 cut(s) 953
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 387, 566, 628, 783
TspMI CCCGGG 2 cut(s) 607, 867
TspRI CASTG 1 cut(s) 358
Tth111I GACNNNGTC 1 cut(s) 296
Vha464I CTTAAG 1 cut(s) 962
VpaK11BI GGWCC 2 cut(s) 336, 723
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 685
XmaI CCCGGG 2 cut(s) 607, 867
XmiI GTMKAC 2 cut(s) 550, 593
XspI CTAG 3 cut(s) 102, 470, 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.