Rroxscaffold_35G00441170

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000035
OG0000098
Physical Location & Seq
Forward (+)
53083 .. 57692
4610 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_35G00441170.1

Sequence Viewer

Length: 738 bp
ATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCGGGCTCACGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGATCAACCAGGTAGCATTCCTTTGACAACGCTGGCACCGCGTAGGGAGACCCTGCAACGAGCACAGCAGTCGTACATGTCTAGCGACAAAACGCTTGAAATTGGACGTCAAGGGTGCAAAGACCCCAAGCCCACCGAATGTTCTGTATCCGAGACATCAAGCAACAACCTGGGAACCGTCGCAAGGTGCACACCAAAAGGCATGCCAATGCAAGGGGCACAGGCACTACTACGATGTCCTTCCCCTAACCGAATGGCTCAGGGAAGGAAAGGGTCGACAAGAGGCACCATTCCTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

245

Amino Acids

26.27

Weight (kDa)

10.65

Isoelectric Point (pI)

67.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 544
AccB1I GGYRCC 2 cut(s) 469, 719
AccB7I CCANNNNNTGG 1 cut(s) 80
AccBSI CCGCTC 1 cut(s) 236
AccI GTMKAC 1 cut(s) 710
AccII CGCG 4 cut(s) 56, 276, 332, 475
AccIII TCCGGA 2 cut(s) 16, 394
AciI CCGC 8 cut(s) 32, 63, 78, 234, 239, 271, 274, 473
AclWI GGATC 1 cut(s) 444
AcoI YGGCCR 2 cut(s) 231, 314
AcyI GRCGYC 1 cut(s) 541
AfaI GTAC 1 cut(s) 509
AfiI CCNNNNNNNGG 9 cut(s) 80, 93, 109, 174, 316, 323, 353, 618, 647
AflII CTTAAG 1 cut(s) 335
AflIII ACRYGT 1 cut(s) 510
AgsI TTSAA 4 cut(s) 26, 183, 197, 533
AjiI CACGTC 1 cut(s) 60
AjnI CCWGG 5 cut(s) 108, 254, 296, 442, 603
Alw21I GWGCWC 3 cut(s) 70, 499, 626
Alw26I GTCTC 2 cut(s) 476, 581
Alw44I GTGCAC 1 cut(s) 622
AlwI GGATC 1 cut(s) 444
AlwNI CAGNNNCTG 1 cut(s) 80
Aor13HI TCCGGA 2 cut(s) 16, 394
AoxI GGCC 5 cut(s) 29, 176, 231, 294, 314
ApaLI GTGCAC 1 cut(s) 622
ApeKI GCWGC 2 cut(s) 264, 371
AspLEI GCGC 4 cut(s) 42, 278, 334, 342
AspS9I GGNCC 4 cut(s) 11, 29, 83, 294
AsuC2I CCSGG 3 cut(s) 36, 243, 318
AsuHPI GGTGA 2 cut(s) 411, 418
AvaII GGWCC 2 cut(s) 11, 83
BaeGI GKGCMC 2 cut(s) 626, 655
BanI GGYRCC 2 cut(s) 469, 719
BanII GRGCYC 1 cut(s) 248
Bbv12I GWGCWC 3 cut(s) 70, 499, 626
BbvI GCAGC 2 cut(s) 276, 383
BccI CCATC 1 cut(s) 351
BceAI ACGGC 5 cut(s) 87, 133, 246, 329, 359
BcgI CGANNNNNNTGC 4 cut(s) 107, 141, 486, 520
BciT130I CCWGG 5 cut(s) 110, 256, 298, 444, 605
BciVI GTATCC 1 cut(s) 592
BcnI CCSGG 3 cut(s) 36, 243, 318
BcoDI GTCTC 2 cut(s) 476, 581
BfaI CTAG 2 cut(s) 359, 516
BfoI RGCGCY 1 cut(s) 343
BfrI CTTAAG 1 cut(s) 335
BfuI GTATCC 1 cut(s) 592
BglI GCCNNNNNGGC 2 cut(s) 37, 313
BglII AGATCT 1 cut(s) 218
BisI GCNGC 6 cut(s) 32, 78, 234, 265, 274, 372
BlpI GCTNAGC 1 cut(s) 98
BlsI GCNGC 6 cut(s) 33, 79, 235, 266, 275, 373
Bme1390I CCNGG 8 cut(s) 36, 110, 243, 256, 298, 318, 444, 605
Bme18I GGWCC 2 cut(s) 11, 83
BmgBI CACGTC 1 cut(s) 60
BmgT120I GGNCC 4 cut(s) 11, 29, 83, 294
BmiI GGNNCC 7 cut(s) 85, 161, 295, 387, 471, 610, 721
BmrFI CCNGG 8 cut(s) 36, 110, 243, 256, 298, 318, 444, 605
Bpu10I CCTNAGC 1 cut(s) 693
Bpu1102I GCTNAGC 1 cut(s) 98
BpuMI CCSGG 3 cut(s) 36, 243, 318
BsaHI GRCGYC 1 cut(s) 541
BsaI GGTCTC 1 cut(s) 476
BsaJI CCNNGG 5 cut(s) 35, 109, 254, 432, 604
BsaWI WCCGGW 3 cut(s) 16, 44, 394
BsaXI ACNNNNNCTCC 4 cut(s) 75, 105, 220, 250
Bsc4I CCNNNNNNNGG 9 cut(s) 80, 93, 109, 174, 316, 323, 353, 618, 647
BseAI TCCGGA 2 cut(s) 16, 394
BseBI CCWGG 5 cut(s) 110, 256, 298, 444, 605
BseDI CCNNGG 5 cut(s) 35, 109, 254, 432, 604
BseGI GGATG 1 cut(s) 343
BseLI CCNNNNNNNGG 9 cut(s) 80, 93, 109, 174, 316, 323, 353, 618, 647
BseMII CTCAG 3 cut(s) 89, 395, 707
BseSI GKGCMC 2 cut(s) 626, 655
BseX3I CGGCCG 2 cut(s) 231, 314
BseXI GCAGC 2 cut(s) 276, 383
BsgI GTGCAG 1 cut(s) 207
Bsh1236I CGCG 4 cut(s) 56, 276, 332, 475
Bsh1285I CGRYCG 3 cut(s) 234, 271, 317
BshFI GGCC 5 cut(s) 31, 178, 233, 296, 316
BshNI GGYRCC 2 cut(s) 469, 719
BsiEI CGRYCG 3 cut(s) 234, 271, 317
BsiHKAI GWGCWC 3 cut(s) 70, 499, 626
BsiSI CCGG 7 cut(s) 17, 35, 45, 94, 242, 317, 395
BslI CCNNNNNNNGG 9 cut(s) 80, 93, 109, 174, 316, 323, 353, 618, 647
BsmAI GTCTC 2 cut(s) 476, 581
BsmI GAATGC 1 cut(s) 450
BsnI GGCC 5 cut(s) 31, 178, 233, 296, 316
Bso31I GGTCTC 1 cut(s) 476
Bsp1286I GDGCHC 5 cut(s) 70, 248, 499, 626, 655
Bsp13I TCCGGA 2 cut(s) 16, 394
Bsp143I GATC 3 cut(s) 124, 218, 436
Bsp1720I GCTNAGC 1 cut(s) 98
Bsp19I CCATGG 1 cut(s) 432
BspACI CCGC 8 cut(s) 32, 63, 78, 234, 239, 271, 274, 473
BspANI GGCC 5 cut(s) 31, 178, 233, 296, 316
BspCNI CTCAG 3 cut(s) 90, 394, 706
BspEI TCCGGA 2 cut(s) 16, 394
BspFNI CGCG 4 cut(s) 56, 276, 332, 475
BspLI GGNNCC 7 cut(s) 85, 161, 295, 387, 471, 610, 721
BspPI GGATC 1 cut(s) 444
BspQI GCTCTTC 1 cut(s) 75
BspT107I GGYRCC 2 cut(s) 469, 719
BspTI CTTAAG 1 cut(s) 335
BspTNI GGTCTC 1 cut(s) 476
BsrBI CCGCTC 1 cut(s) 236
BssECI CCNNGG 5 cut(s) 35, 109, 254, 432, 604
BssMI GATC 3 cut(s) 124, 218, 436
BssNI GRCGYC 1 cut(s) 541
BssT1I CCWWGG 1 cut(s) 432
Bst2UI CCWGG 5 cut(s) 110, 256, 298, 444, 605
Bst4CI ACNGT 1 cut(s) 613
Bst6I CTCTTC 2 cut(s) 75, 177
BstACI GRCGYC 1 cut(s) 541
BstAFI CTTAAG 1 cut(s) 335
BstC8I GCNNGC 3 cut(s) 120, 468, 638
BstDEI CTNAG 3 cut(s) 98, 381, 693
BstDSI CCRYGG 1 cut(s) 432
BstF5I GGATG 1 cut(s) 343
BstFNI CGCG 4 cut(s) 56, 276, 332, 475
BstH2I RGCGCY 1 cut(s) 343
BstHHI GCGC 4 cut(s) 42, 278, 334, 342
BstKTI GATC 3 cut(s) 127, 221, 439
BstMAI GTCTC 2 cut(s) 476, 581
BstMBI GATC 3 cut(s) 124, 218, 436
BstMCI CGRYCG 3 cut(s) 234, 271, 317
BstMWI GCNNNNNNNGC 7 cut(s) 37, 74, 230, 270, 273, 313, 472
BstNI CCWGG 5 cut(s) 110, 256, 298, 444, 605
BstNSI RCATGY 2 cut(s) 514, 640
BstSCI CCNGG 8 cut(s) 34, 108, 241, 254, 296, 316, 442, 603
BstSLI GKGCMC 2 cut(s) 626, 655
BstUI CGCG 4 cut(s) 56, 276, 332, 475
BstV1I GCAGC 2 cut(s) 276, 383
BstX2I RGATCY 1 cut(s) 218
BstYI RGATCY 1 cut(s) 218
BstZI CGGCCG 2 cut(s) 231, 314
BsuI GTATCC 1 cut(s) 592
BsuRI GGCC 5 cut(s) 31, 178, 233, 296, 316
BtgI CCRYGG 1 cut(s) 432
BtrI CACGTC 1 cut(s) 60
BtsCI GGATG 1 cut(s) 343
Cac8I GCNNGC 3 cut(s) 120, 468, 638
CaiI CAGNNNCTG 1 cut(s) 80
CfoI GCGC 4 cut(s) 42, 278, 334, 342
Cfr13I GGNCC 4 cut(s) 11, 29, 83, 294
CsiI ACCWGGT 1 cut(s) 442
Csp6I GTAC 1 cut(s) 508
CviAII CATG 5 cut(s) 137, 156, 433, 511, 637
CviQI GTAC 1 cut(s) 508
DdeI CTNAG 3 cut(s) 98, 381, 693
DpnI GATC 3 cut(s) 126, 220, 438
DpnII GATC 3 cut(s) 124, 218, 436
EaeI YGGCCR 2 cut(s) 231, 314
EagI CGGCCG 2 cut(s) 231, 314
Eam1104I CTCTTC 2 cut(s) 75, 177
EarI CTCTTC 2 cut(s) 75, 177
EciI GGCGGA 1 cut(s) 228
EclXI CGGCCG 2 cut(s) 231, 314
Eco130I CCWWGG 1 cut(s) 432
Eco24I GRGCYC 1 cut(s) 248
Eco31I GGTCTC 1 cut(s) 476
Eco47I GGWCC 2 cut(s) 11, 83
Eco52I CGGCCG 2 cut(s) 231, 314
EcoO109I RGGNCCY 1 cut(s) 294
EcoRII CCWGG 5 cut(s) 108, 254, 296, 442, 603
EcoT14I CCWWGG 1 cut(s) 432
EcoT38I GRGCYC 1 cut(s) 248
ErhI CCWWGG 1 cut(s) 432
FaeI CATG 5 cut(s) 140, 159, 436, 514, 640
FaiI YATR 6 cut(s) 138, 157, 323, 434, 512, 638
FatI CATG 5 cut(s) 136, 155, 432, 510, 636
FblI GTMKAC 1 cut(s) 710
Fnu4HI GCNGC 6 cut(s) 32, 78, 234, 265, 274, 372
FokI GGATG 1 cut(s) 330
FriOI GRGCYC 1 cut(s) 248
Fsp4HI GCNGC 6 cut(s) 32, 78, 234, 265, 274, 372
FspBI CTAG 2 cut(s) 359, 516
GlaI GCGC 4 cut(s) 41, 277, 333, 341
GluI GCNGC 6 cut(s) 32, 78, 234, 265, 274, 372
HaeII RGCGCY 1 cut(s) 343
HaeIII GGCC 5 cut(s) 31, 178, 233, 296, 316
HapII CCGG 7 cut(s) 17, 35, 45, 94, 242, 317, 395
HhaI GCGC 4 cut(s) 42, 278, 334, 342
Hin1I GRCGYC 1 cut(s) 541
Hin1II CATG 5 cut(s) 140, 159, 436, 514, 640
Hin6I GCGC 4 cut(s) 40, 276, 332, 340
HinP1I GCGC 4 cut(s) 40, 276, 332, 340
HincII GTYRAC 1 cut(s) 711
HindII GTYRAC 1 cut(s) 711
HinfI GANTC 2 cut(s) 365, 398
HpaII CCGG 7 cut(s) 17, 35, 45, 94, 242, 317, 395
HphI GGTGA 2 cut(s) 411, 418
Hpy166II GTNNAC 3 cut(s) 153, 624, 711
Hpy188I TCNGA 1 cut(s) 586
Hpy188III TCNNGA 2 cut(s) 17, 395
Hpy8I GTNNAC 3 cut(s) 153, 624, 711
Hpy99I CGWCG 4 cut(s) 61, 232, 315, 617
HpyAV CCTTC 3 cut(s) 189, 684, 693
HpyCH4III ACNGT 1 cut(s) 613
HpyCH4IV ACGT 2 cut(s) 59, 541
HpyCH4V TGCA 7 cut(s) 142, 224, 264, 490, 552, 624, 646
HpyF10VI GCNNNNNNNGC 7 cut(s) 37, 74, 230, 270, 273, 313, 472
HpyF3I CTNAG 3 cut(s) 98, 381, 693
HpySE526I ACGT 2 cut(s) 59, 541
Hsp92I GRCGYC 1 cut(s) 541
Hsp92II CATG 5 cut(s) 140, 159, 436, 514, 640
HspAI GCGC 4 cut(s) 40, 276, 332, 340
Kpn2I TCCGGA 2 cut(s) 16, 394
Kzo9I GATC 3 cut(s) 124, 218, 436
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 2 cut(s) 241, 391
Lsp1109I GCAGC 2 cut(s) 276, 383
MabI ACCWGGT 1 cut(s) 442
MaeI CTAG 2 cut(s) 359, 516
MaeII ACGT 2 cut(s) 59, 541
MaeIII GTNAC 3 cut(s) 326, 417, 424
MalI GATC 3 cut(s) 126, 220, 438
MbiI CCGCTC 1 cut(s) 236
MboI GATC 3 cut(s) 124, 218, 436
MboII GAAGA 2 cut(s) 62, 164
MflI RGATCY 1 cut(s) 218
MhlI GDGCHC 5 cut(s) 70, 248, 499, 626, 655
MluCI AATT 2 cut(s) 409, 534
MnlI CCTC 6 cut(s) 24, 101, 180, 290, 400, 710
MroI TCCGGA 2 cut(s) 16, 394
MseI TTAA 1 cut(s) 336
MslI CAYNNNNRTG 2 cut(s) 431, 641
MspA1I CMGCKG 1 cut(s) 80
MspCI CTTAAG 1 cut(s) 335
MspI CCGG 7 cut(s) 17, 35, 45, 94, 242, 317, 395
MspR9I CCNGG 8 cut(s) 36, 110, 243, 256, 298, 318, 444, 605
Mva1269I GAATGC 1 cut(s) 450
MvaI CCWGG 5 cut(s) 110, 256, 298, 444, 605
MvnI CGCG 4 cut(s) 56, 276, 332, 475
MwoI GCNNNNNNNGC 7 cut(s) 37, 74, 230, 270, 273, 313, 472
NciI CCSGG 3 cut(s) 36, 243, 318
NcoI CCATGG 1 cut(s) 432
NdeII GATC 3 cut(s) 124, 218, 436
NlaIII CATG 5 cut(s) 140, 159, 436, 514, 640
NlaIV GGNNCC 7 cut(s) 85, 161, 295, 387, 471, 610, 721
NmuCI GTSAC 3 cut(s) 326, 417, 424
NspI RCATGY 2 cut(s) 514, 640
PaeI GCATGC 1 cut(s) 640
PciI ACATGT 1 cut(s) 510
PciSI GCTCTTC 1 cut(s) 75
PctI GAATGC 1 cut(s) 450
PfeI GAWTC 2 cut(s) 365, 398
PflMI CCANNNNNTGG 1 cut(s) 80
PkrI GCNGC 6 cut(s) 33, 79, 235, 266, 275, 373
PscI ACATGT 1 cut(s) 510
Psp6I CCWGG 5 cut(s) 108, 254, 296, 442, 603
PspGI CCWGG 5 cut(s) 108, 254, 296, 442, 603
PspN4I GGNNCC 7 cut(s) 85, 161, 295, 387, 471, 610, 721
PspPI GGNCC 4 cut(s) 11, 29, 83, 294
PstNI CAGNNNCTG 1 cut(s) 80
PsuI RGATCY 1 cut(s) 218
RsaI GTAC 1 cut(s) 509
RsaNI GTAC 1 cut(s) 508
RseI CAYNNNNRTG 2 cut(s) 431, 641
SalI GTCGAC 1 cut(s) 709
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 1 cut(s) 336
SatI GCNGC 6 cut(s) 32, 78, 234, 265, 274, 372
Sau3AI GATC 3 cut(s) 124, 218, 436
Sau96I GGNCC 4 cut(s) 11, 29, 83, 294
ScrFI CCNGG 8 cut(s) 36, 110, 243, 256, 298, 318, 444, 605
SduI GDGCHC 5 cut(s) 70, 248, 499, 626, 655
SetI ASST 9 cut(s) 62, 93, 165, 260, 328, 448, 544, 606, 623
SexAI ACCWGGT 1 cut(s) 442
SinI GGWCC 2 cut(s) 11, 83
SmiMI CAYNNNNRTG 2 cut(s) 431, 641
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
SphI GCATGC 1 cut(s) 640
Sse9I AATT 2 cut(s) 409, 534
SsiI CCGC 8 cut(s) 32, 63, 78, 234, 239, 271, 274, 473
SspI AATATT 1 cut(s) 200
SspMI CTAG 2 cut(s) 359, 516
StyD4I CCNGG 8 cut(s) 34, 108, 241, 254, 296, 316, 442, 603
StyI CCWWGG 1 cut(s) 432
TaaI ACNGT 1 cut(s) 613
TaiI ACGT 2 cut(s) 62, 544
TaqI TCGA 3 cut(s) 127, 401, 710
TasI AATT 2 cut(s) 409, 534
TauI GCSGC 4 cut(s) 34, 80, 236, 276
TfiI GAWTC 2 cut(s) 365, 398
Tru1I TTAA 1 cut(s) 336
Tru9I TTAA 1 cut(s) 336
TseFI GTSAC 3 cut(s) 326, 417, 424
TseI GCWGC 2 cut(s) 264, 371
Tsp45I GTSAC 3 cut(s) 326, 417, 424
TspGWI ACGGA 1 cut(s) 405
Van91I CCANNNNNTGG 1 cut(s) 80
Vha464I CTTAAG 1 cut(s) 335
VneI GTGCAC 1 cut(s) 622
VpaK11BI GGWCC 2 cut(s) 11, 83
XceI RCATGY 2 cut(s) 514, 640
XmiI GTMKAC 1 cut(s) 710
XspI CTAG 2 cut(s) 359, 516
ZraI GACGTC 1 cut(s) 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.