Rroxscaffold_14G00441930

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000014
OG0000098
Physical Location & Seq
Forward (+)
28784 .. 29833
1050 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_14G00441930.1

Sequence Viewer

Length: 669 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGCTATCCCCGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACCGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCTTGCCTACATTGTTCCATTGACCGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

222

Amino Acids

25.07

Weight (kDa)

10.05

Isoelectric Point (pI)

54.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccBSI CCGCTC 1 cut(s) 487
AccI GTMKAC 1 cut(s) 413
AccII CGCG 2 cut(s) 477, 496
AciI CCGC 9 cut(s) 269, 304, 318, 360, 477, 485, 494, 496, 661
AclWI GGATC 5 cut(s) 34, 136, 318, 586, 599
AcoI YGGCCR 1 cut(s) 467
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 2 cut(s) 163, 400
AfiI CCNNNNNNNGG 5 cut(s) 346, 372, 465, 469, 476
AgsI TTSAA 1 cut(s) 422
AluBI AGCT 5 cut(s) 72, 105, 186, 229, 505
AluI AGCT 5 cut(s) 72, 105, 186, 229, 505
Alw21I GWGCWC 1 cut(s) 231
Alw26I GTCTC 1 cut(s) 645
AlwI GGATC 5 cut(s) 34, 136, 318, 586, 599
Ama87I CYCGRG 3 cut(s) 427, 506, 580
AoxI GGCC 2 cut(s) 136, 467
ApeKI GCWGC 3 cut(s) 58, 502, 565
ApoI RAATTY 1 cut(s) 110
AspS9I GGNCC 3 cut(s) 337, 538, 544
AsuC2I CCSGG 5 cut(s) 308, 428, 429, 466, 542
AsuHPI GGTGA 2 cut(s) 508, 635
AvaI CYCGRG 3 cut(s) 427, 506, 580
AvaII GGWCC 3 cut(s) 337, 538, 544
BaeGI GKGCMC 2 cut(s) 359, 556
BamHI GGATCC 1 cut(s) 591
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 292
Bbv12I GWGCWC 1 cut(s) 231
BbvI GCAGC 3 cut(s) 45, 514, 577
BcgI CGANNNNNNTGC 2 cut(s) 593, 627
BcnI CCSGG 5 cut(s) 308, 428, 429, 466, 542
BcoDI GTCTC 1 cut(s) 645
BfaI CTAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 252
BisI GCNGC 6 cut(s) 59, 269, 478, 494, 503, 566
BlsI GCNGC 6 cut(s) 60, 270, 479, 495, 504, 567
Bme1390I CCNGG 5 cut(s) 308, 428, 429, 466, 542
Bme18I GGWCC 3 cut(s) 337, 538, 544
BmeT110I CYCGRG 3 cut(s) 427, 506, 580
BmgT120I GGNCC 3 cut(s) 337, 538, 544
BmiI GGNNCC 5 cut(s) 338, 539, 545, 546, 593
BmrFI CCNGG 5 cut(s) 308, 428, 429, 466, 542
BmrI ACTGGG 1 cut(s) 448
BmsI GCATC 1 cut(s) 648
BmuI ACTGGG 1 cut(s) 448
BpiI GAAGAC 1 cut(s) 292
BpuMI CCSGG 5 cut(s) 308, 428, 429, 466, 542
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 645
BsaJI CCNNGG 7 cut(s) 79, 427, 464, 494, 581, 633, 646
BsaWI WCCGGW 1 cut(s) 164
Bsc4I CCNNNNNNNGG 5 cut(s) 346, 372, 465, 469, 476
Bse118I RCCGGY 1 cut(s) 469
Bse1I ACTGG 2 cut(s) 402, 454
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 79, 427, 464, 494, 581, 633, 646
BseLI CCNNNNNNNGG 5 cut(s) 346, 372, 465, 469, 476
BseMII CTCAG 1 cut(s) 399
BseNI ACTGG 2 cut(s) 402, 454
BseSI GKGCMC 2 cut(s) 359, 556
BseX3I CGGCCG 1 cut(s) 467
BseXI GCAGC 3 cut(s) 45, 514, 577
BseYI CCCAGC 2 cut(s) 273, 555
Bsh1236I CGCG 2 cut(s) 477, 496
Bsh1285I CGRYCG 2 cut(s) 417, 470
BshFI GGCC 2 cut(s) 138, 469
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 417, 470
BsiHKAI GWGCWC 1 cut(s) 231
BsiHKCI CYCGRG 3 cut(s) 427, 506, 580
BsiSI CCGG 6 cut(s) 165, 308, 428, 466, 470, 541
BslFI GGGAC 3 cut(s) 446, 551, 557
BslI CCNNNNNNNGG 5 cut(s) 346, 372, 465, 469, 476
BsmAI GTCTC 1 cut(s) 645
BsmFI GGGAC 3 cut(s) 446, 551, 557
BsnI GGCC 2 cut(s) 138, 469
Bso31I GGTCTC 1 cut(s) 645
BsoBI CYCGRG 3 cut(s) 427, 506, 580
Bsp1286I GDGCHC 3 cut(s) 231, 359, 556
Bsp143I GATC 4 cut(s) 26, 128, 310, 591
BspACI CCGC 9 cut(s) 269, 304, 318, 360, 477, 485, 494, 496, 661
BspANI GGCC 2 cut(s) 138, 469
BspCNI CTCAG 1 cut(s) 400
BspDI ATCGAT 1 cut(s) 131
BspFNI CGCG 2 cut(s) 477, 496
BspLI GGNNCC 5 cut(s) 338, 539, 545, 546, 593
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 586, 599
BspQI GCTCTTC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 645
BsrBI CCGCTC 1 cut(s) 487
BsrFI RCCGGY 1 cut(s) 469
BsrI ACTGG 2 cut(s) 402, 454
BssAI RCCGGY 1 cut(s) 469
BssECI CCNNGG 7 cut(s) 79, 427, 464, 494, 581, 633, 646
BssMI GATC 4 cut(s) 26, 128, 310, 591
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 646
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 2 cut(s) 151, 418
Bst6I CTCTTC 1 cut(s) 4
BstC8I GCNNGC 4 cut(s) 70, 318, 471, 475
BstDEI CTNAG 2 cut(s) 235, 408
BstDSI CCRYGG 2 cut(s) 79, 494
BstFNI CGCG 2 cut(s) 477, 496
BstKTI GATC 4 cut(s) 29, 131, 313, 594
BstMAI GTCTC 1 cut(s) 645
BstMBI GATC 4 cut(s) 26, 128, 310, 591
BstMCI CGRYCG 2 cut(s) 417, 470
BstMWI GCNNNNNNNGC 7 cut(s) 50, 274, 493, 499, 502, 508, 565
BstSCI CCNGG 5 cut(s) 306, 426, 427, 464, 540
BstSLI GKGCMC 2 cut(s) 359, 556
BstUI CGCG 2 cut(s) 477, 496
BstV1I GCAGC 3 cut(s) 45, 514, 577
BstV2I GAAGAC 1 cut(s) 292
BstX2I RGATCY 1 cut(s) 591
BstYI RGATCY 1 cut(s) 591
BstZI CGGCCG 1 cut(s) 467
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 2 cut(s) 138, 469
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 2 cut(s) 79, 494
BtsI GCAGTG 2 cut(s) 333, 359
BtsIMutI CAGTG 2 cut(s) 333, 359
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 4 cut(s) 70, 318, 471, 475
Cfr10I RCCGGY 1 cut(s) 469
Cfr13I GGNCC 3 cut(s) 337, 538, 544
Cfr42I CCGCGG 1 cut(s) 497
Cfr9I CCCGGG 1 cut(s) 427
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 2 cut(s) 162, 399
CviQI GTAC 2 cut(s) 162, 399
DdeI CTNAG 2 cut(s) 235, 408
DpnI GATC 4 cut(s) 28, 130, 312, 593
DpnII GATC 4 cut(s) 26, 128, 310, 591
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 467
EagI CGGCCG 1 cut(s) 467
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 467
Eco130I CCWWGG 1 cut(s) 646
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 645
Eco47I GGWCC 3 cut(s) 337, 538, 544
Eco52I CGGCCG 1 cut(s) 467
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 3 cut(s) 427, 506, 580
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 544
EcoT14I CCWWGG 1 cut(s) 646
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 646
FaiI YATR 2 cut(s) 47, 667
FalI AAGNNNNNCTT 2 cut(s) 315, 347
FaqI GGGAC 3 cut(s) 446, 551, 557
FauI CCCGC 3 cut(s) 325, 367, 492
FblI GTMKAC 1 cut(s) 413
Fnu4HI GCNGC 6 cut(s) 59, 269, 478, 494, 503, 566
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 6 cut(s) 59, 269, 478, 494, 503, 566
FspBI CTAG 1 cut(s) 102
GluI GCNGC 6 cut(s) 59, 269, 478, 494, 503, 566
GsaI CCCAGC 2 cut(s) 277, 559
HaeIII GGCC 2 cut(s) 138, 469
HapII CCGG 6 cut(s) 165, 308, 428, 466, 470, 541
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HinfI GANTC 4 cut(s) 175, 368, 385, 410
HpaII CCGG 6 cut(s) 165, 308, 428, 466, 470, 541
HphI GGTGA 2 cut(s) 508, 635
Hpy166II GTNNAC 3 cut(s) 414, 516, 643
Hpy188I TCNGA 5 cut(s) 94, 174, 367, 384, 409
Hpy188III TCNNGA 2 cut(s) 536, 580
Hpy8I GTNNAC 3 cut(s) 414, 516, 643
Hpy99I CGWCG 2 cut(s) 44, 531
HpyAV CCTTC 2 cut(s) 17, 436
HpyCH4III ACNGT 2 cut(s) 151, 418
HpyCH4IV ACGT 1 cut(s) 39
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 274, 493, 499, 502, 508, 565
HpyF3I CTNAG 2 cut(s) 235, 408
HpySE526I ACGT 1 cut(s) 39
KflI GGGWCCC 1 cut(s) 544
KroI GCCGGC 1 cut(s) 469
KroNI GCCGGC 1 cut(s) 471
KspI CCGCGG 1 cut(s) 497
Kzo9I GATC 4 cut(s) 26, 128, 310, 591
LguI GCTCTTC 1 cut(s) 4
LmnI GCTCC 1 cut(s) 445
Lsp1109I GCAGC 3 cut(s) 45, 514, 577
LweI GCATC 1 cut(s) 648
MaeI CTAG 1 cut(s) 102
MaeII ACGT 1 cut(s) 39
MaeIII GTNAC 2 cut(s) 83, 585
MalI GATC 4 cut(s) 28, 130, 312, 593
MbiI CCGCTC 1 cut(s) 487
MboI GATC 4 cut(s) 26, 128, 310, 591
MboII GAAGA 2 cut(s) 21, 292
MflI RGATCY 1 cut(s) 591
MhlI GDGCHC 3 cut(s) 231, 359, 556
MluCI AATT 1 cut(s) 110
MlyI GAGTC 1 cut(s) 419
MnlI CCTC 6 cut(s) 109, 340, 373, 571, 576, 628
MroNI GCCGGC 1 cut(s) 469
MseI TTAA 2 cut(s) 108, 257
MspA1I CMGCKG 1 cut(s) 496
MspI CCGG 6 cut(s) 165, 308, 428, 466, 470, 541
MspR9I CCNGG 5 cut(s) 308, 428, 429, 466, 542
MvnI CGCG 2 cut(s) 477, 496
MwoI GCNNNNNNNGC 7 cut(s) 50, 274, 493, 499, 502, 508, 565
NaeI GCCGGC 1 cut(s) 471
NciI CCSGG 5 cut(s) 308, 428, 429, 466, 542
NdeII GATC 4 cut(s) 26, 128, 310, 591
NgoMIV GCCGGC 1 cut(s) 469
NlaIV GGNNCC 5 cut(s) 338, 539, 545, 546, 593
PaeR7I CTCGAG 1 cut(s) 506
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 1 cut(s) 4
PdiI GCCGGC 1 cut(s) 471
PfeI GAWTC 3 cut(s) 175, 368, 385
PflFI GACNNNGTC 1 cut(s) 296
PkrI GCNGC 6 cut(s) 60, 270, 479, 495, 504, 567
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
PpuMI RGGWCCY 1 cut(s) 544
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 544
PspFI CCCAGC 2 cut(s) 273, 555
PspN4I GGNNCC 5 cut(s) 338, 539, 545, 546, 593
PspPI GGNCC 3 cut(s) 337, 538, 544
PspPPI RGGWCCY 1 cut(s) 544
PspXI VCTCGAGB 1 cut(s) 506
PsuI RGATCY 1 cut(s) 591
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 2 cut(s) 163, 400
RsaNI GTAC 2 cut(s) 162, 399
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 497
SalI GTCGAC 1 cut(s) 412
SapI GCTCTTC 1 cut(s) 4
SaqAI TTAA 2 cut(s) 108, 257
SatI GCNGC 6 cut(s) 59, 269, 478, 494, 503, 566
Sau3AI GATC 4 cut(s) 26, 128, 310, 591
Sau96I GGNCC 3 cut(s) 337, 538, 544
SchI GAGTC 1 cut(s) 419
ScrFI CCNGG 5 cut(s) 308, 428, 429, 466, 542
SduI GDGCHC 3 cut(s) 231, 359, 556
SfaNI GCATC 1 cut(s) 648
Sfr274I CTCGAG 1 cut(s) 506
Sfr303I CCGCGG 1 cut(s) 497
SgrBI CCGCGG 1 cut(s) 497
SinI GGWCC 3 cut(s) 337, 538, 544
SlaI CTCGAG 1 cut(s) 506
SmaI CCCGGG 1 cut(s) 429
SmlI CTYRAG 1 cut(s) 506
SmoI CTYRAG 1 cut(s) 506
Sse9I AATT 1 cut(s) 110
SsiI CCGC 9 cut(s) 269, 304, 318, 360, 477, 485, 494, 496, 661
SspMI CTAG 1 cut(s) 102
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 5 cut(s) 306, 426, 427, 464, 540
StyI CCWWGG 1 cut(s) 646
TaaI ACNGT 2 cut(s) 151, 418
TaiI ACGT 1 cut(s) 42
TaqI TCGA 4 cut(s) 21, 131, 413, 507
TaqII GACCGA 1 cut(s) 647
TasI AATT 1 cut(s) 110
TauI GCSGC 3 cut(s) 271, 480, 496
TfiI GAWTC 3 cut(s) 175, 368, 385
Tru1I TTAA 2 cut(s) 108, 257
Tru9I TTAA 2 cut(s) 108, 257
TscAI CASTG 2 cut(s) 333, 359
TseI GCWGC 3 cut(s) 58, 502, 565
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 386, 388, 448, 604
TspMI CCCGGG 1 cut(s) 427
TspRI CASTG 2 cut(s) 333, 359
Tth111I GACNNNGTC 1 cut(s) 296
VpaK11BI GGWCC 3 cut(s) 337, 538, 544
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 506
XmaI CCCGGG 1 cut(s) 427
XmiI GTMKAC 1 cut(s) 413
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.