Rroxscaffold_47G00444020

DNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000047
OG0000098
Physical Location & Seq
Reverse (-)
31510 .. 32833
1324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_47G00444020.1

Sequence Viewer

Length: 633 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGTCTTCTTTCCCCGCCGATTCTCGCCAAGCCCGTTCCCTTGGCCGTGGTTTCGCCGGATAGTAGACAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCAGTGATCTGCACCGACGGCCGCTCCGCCGGCTCACGCCCCGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTCGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

210

Amino Acids

22.19

Weight (kDa)

11.07

Isoelectric Point (pI)

62.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 599
Acc36I ACCTGC 1 cut(s) 599
AccBSI CCGCTC 1 cut(s) 474
AccI GTMKAC 1 cut(s) 256
AccII CGCG 4 cut(s) 294, 399, 513, 569
AccIII TCCGGA 1 cut(s) 359
AclI AACGTT 1 cut(s) 95
AclWI GGATC 1 cut(s) 23
AcoI YGGCCR 4 cut(s) 234, 438, 469, 552
AfaI GTAC 1 cut(s) 331
AfiI CCNNNNNNNGG 6 cut(s) 51, 77, 423, 436, 554, 590
AflII CTTAAG 1 cut(s) 572
AgsI TTSAA 1 cut(s) 369
AjiI CACGTC 1 cut(s) 403
AluBI AGCT 1 cut(s) 186
AluI AGCT 1 cut(s) 186
Alw21I GWGCWC 1 cut(s) 413
Alw26I GTCTC 1 cut(s) 304
AlwI GGATC 1 cut(s) 23
Aor13HI TCCGGA 1 cut(s) 359
AoxI GGCC 6 cut(s) 234, 372, 438, 469, 531, 552
ApeKI GCWGC 1 cut(s) 501
AspLEI GCGC 5 cut(s) 294, 385, 515, 571, 579
AspS9I GGNCC 5 cut(s) 42, 354, 372, 426, 531
AsuC2I CCSGG 2 cut(s) 13, 379
AsuHPI GGTGA 2 cut(s) 294, 623
AvaII GGWCC 3 cut(s) 42, 354, 426
BaeGI GKGCMC 1 cut(s) 64
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 413
BbvI GCAGC 1 cut(s) 513
BccI CCATC 1 cut(s) 588
BceAI ACGGC 4 cut(s) 221, 430, 484, 567
BcnI CCSGG 2 cut(s) 13, 379
BcoDI GTCTC 1 cut(s) 304
BfaI CTAG 2 cut(s) 176, 596
BfoI RGCGCY 1 cut(s) 580
BfrI CTTAAG 1 cut(s) 572
BfuAI ACCTGC 1 cut(s) 599
BglI GCCNNNNNGGC 2 cut(s) 380, 551
BisI GCNGC 5 cut(s) 375, 421, 472, 502, 511
BlsI GCNGC 5 cut(s) 376, 422, 473, 503, 512
Bme1390I CCNGG 2 cut(s) 13, 379
Bme18I GGWCC 3 cut(s) 42, 354, 426
BmgBI CACGTC 1 cut(s) 403
BmgT120I GGNCC 5 cut(s) 42, 354, 372, 426, 531
BmiI GGNNCC 4 cut(s) 43, 132, 428, 532
BmrFI CCNGG 2 cut(s) 13, 379
BmsI GCATC 1 cut(s) 307
BoxI GACNNNNGTC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 188
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 2 cut(s) 13, 379
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 5 cut(s) 231, 237, 305, 378, 534
BsaWI WCCGGW 2 cut(s) 359, 387
BsaXI ACNNNNNCTCC 4 cut(s) 418, 448, 458, 488
Bsc4I CCNNNNNNNGG 6 cut(s) 51, 77, 423, 436, 554, 590
Bse118I RCCGGY 3 cut(s) 335, 479, 554
Bse1I ACTGG 1 cut(s) 452
BseAI TCCGGA 1 cut(s) 359
BseDI CCNNGG 5 cut(s) 231, 237, 305, 378, 534
BseGI GGATG 1 cut(s) 580
BseLI CCNNNNNNNGG 6 cut(s) 51, 77, 423, 436, 554, 590
BseNI ACTGG 1 cut(s) 452
BseSI GKGCMC 1 cut(s) 64
BseX3I CGGCCG 3 cut(s) 438, 469, 552
BseXI GCAGC 1 cut(s) 513
BsgI GTGCAG 1 cut(s) 445
Bsh1236I CGCG 4 cut(s) 294, 399, 513, 569
Bsh1285I CGRYCG 5 cut(s) 336, 441, 472, 508, 555
BshFI GGCC 6 cut(s) 236, 374, 440, 471, 533, 554
BsiEI CGRYCG 5 cut(s) 336, 441, 472, 508, 555
BsiHKAI GWGCWC 1 cut(s) 413
BslI CCNNNNNNNGG 6 cut(s) 51, 77, 423, 436, 554, 590
BsmAI GTCTC 1 cut(s) 304
BsnI GGCC 6 cut(s) 236, 374, 440, 471, 533, 554
Bso31I GGTCTC 1 cut(s) 304
Bsp1286I GDGCHC 2 cut(s) 64, 413
Bsp13I TCCGGA 1 cut(s) 359
Bsp143I GATC 2 cut(s) 15, 456
BspANI GGCC 6 cut(s) 236, 374, 440, 471, 533, 554
BspEI TCCGGA 1 cut(s) 359
BspFNI CGCG 4 cut(s) 294, 399, 513, 569
BspLI GGNNCC 4 cut(s) 43, 132, 428, 532
BspMI ACCTGC 1 cut(s) 599
BspPI GGATC 1 cut(s) 23
BspQI GCTCTTC 1 cut(s) 418
BspTI CTTAAG 1 cut(s) 572
BspTNI GGTCTC 1 cut(s) 304
BsrBI CCGCTC 1 cut(s) 474
BsrFI RCCGGY 3 cut(s) 335, 479, 554
BsrI ACTGG 1 cut(s) 452
BssAI RCCGGY 3 cut(s) 335, 479, 554
BssECI CCNNGG 5 cut(s) 231, 237, 305, 378, 534
BssMI GATC 2 cut(s) 15, 456
BssT1I CCWWGG 2 cut(s) 231, 305
Bst4CI ACNGT 1 cut(s) 266
Bst6I CTCTTC 1 cut(s) 418
BstAFI CTTAAG 1 cut(s) 572
BstC8I GCNNGC 2 cut(s) 23, 481
BstDEI CTNAG 1 cut(s) 630
BstDSI CCRYGG 1 cut(s) 237
BstF5I GGATG 1 cut(s) 580
BstFNI CGCG 4 cut(s) 294, 399, 513, 569
BstH2I RGCGCY 1 cut(s) 580
BstHHI GCGC 5 cut(s) 294, 385, 515, 571, 579
BstKTI GATC 2 cut(s) 18, 459
BstMAI GTCTC 1 cut(s) 304
BstMBI GATC 2 cut(s) 15, 456
BstMCI CGRYCG 5 cut(s) 336, 441, 472, 508, 555
BstMWI GCNNNNNNNGC 8 cut(s) 345, 380, 417, 468, 480, 507, 510, 551
BstPAI GACNNNNGTC 1 cut(s) 178
BstSCI CCNGG 2 cut(s) 11, 377
BstSLI GKGCMC 1 cut(s) 64
BstUI CGCG 4 cut(s) 294, 399, 513, 569
BstV1I GCAGC 1 cut(s) 513
BstV2I GAAGAC 1 cut(s) 188
BstZI CGGCCG 3 cut(s) 438, 469, 552
BsuRI GGCC 6 cut(s) 236, 374, 440, 471, 533, 554
BtgI CCRYGG 1 cut(s) 237
BtrI CACGTC 1 cut(s) 403
BtsCI GGATG 1 cut(s) 580
BtsI GCAGTG 2 cut(s) 38, 64
BtsIMutI CAGTG 4 cut(s) 38, 64, 271, 459
BveI ACCTGC 1 cut(s) 599
Cac8I GCNNGC 2 cut(s) 23, 481
CfoI GCGC 5 cut(s) 294, 385, 515, 571, 579
Cfr10I RCCGGY 3 cut(s) 335, 479, 554
Cfr13I GGNCC 5 cut(s) 42, 354, 372, 426, 531
CseI GACGC 1 cut(s) 283
Csp6I GTAC 1 cut(s) 330
CviAII CATG 1 cut(s) 289
CviQI GTAC 1 cut(s) 330
DdeI CTNAG 1 cut(s) 630
DpnI GATC 2 cut(s) 17, 458
DpnII GATC 2 cut(s) 15, 456
EaeI YGGCCR 4 cut(s) 234, 438, 469, 552
EagI CGGCCG 3 cut(s) 438, 469, 552
Eam1104I CTCTTC 1 cut(s) 418
EarI CTCTTC 1 cut(s) 418
EciI GGCGGA 1 cut(s) 466
EclXI CGGCCG 3 cut(s) 438, 469, 552
Eco130I CCWWGG 2 cut(s) 231, 305
Eco31I GGTCTC 1 cut(s) 304
Eco47I GGWCC 3 cut(s) 42, 354, 426
Eco52I CGGCCG 3 cut(s) 438, 469, 552
EcoO109I RGGNCCY 1 cut(s) 531
EcoT14I CCWWGG 2 cut(s) 231, 305
ErhI CCWWGG 2 cut(s) 231, 305
FaeI CATG 1 cut(s) 292
FaiI YATR 4 cut(s) 141, 290, 326, 560
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FatI CATG 1 cut(s) 288
FauI CCCGC 3 cut(s) 30, 72, 213
FblI GTMKAC 1 cut(s) 256
Fnu4HI GCNGC 5 cut(s) 375, 421, 472, 502, 511
FokI GGATG 1 cut(s) 567
Fsp4HI GCNGC 5 cut(s) 375, 421, 472, 502, 511
FspBI CTAG 2 cut(s) 176, 596
GlaI GCGC 5 cut(s) 293, 384, 514, 570, 578
GluI GCNGC 5 cut(s) 375, 421, 472, 502, 511
HaeII RGCGCY 1 cut(s) 580
HaeIII GGCC 6 cut(s) 236, 374, 440, 471, 533, 554
HgaI GACGC 1 cut(s) 283
HhaI GCGC 5 cut(s) 294, 385, 515, 571, 579
Hin1II CATG 1 cut(s) 292
Hin6I GCGC 5 cut(s) 292, 383, 513, 569, 577
HinP1I GCGC 5 cut(s) 292, 383, 513, 569, 577
HinfI GANTC 5 cut(s) 73, 179, 211, 271, 602
HphI GGTGA 2 cut(s) 294, 623
Hpy166II GTNNAC 2 cut(s) 257, 302
Hpy188I TCNGA 2 cut(s) 72, 173
Hpy188III TCNNGA 1 cut(s) 360
Hpy8I GTNNAC 2 cut(s) 257, 302
Hpy99I CGWCG 3 cut(s) 404, 470, 553
HpyAV CCTTC 1 cut(s) 121
HpyCH4III ACNGT 1 cut(s) 266
HpyCH4IV ACGT 2 cut(s) 95, 402
HpyCH4V TGCA 2 cut(s) 462, 501
HpyF10VI GCNNNNNNNGC 8 cut(s) 345, 380, 417, 468, 480, 507, 510, 551
HpyF3I CTNAG 1 cut(s) 630
HpySE526I ACGT 2 cut(s) 95, 402
Hsp92II CATG 1 cut(s) 292
HspAI GCGC 5 cut(s) 292, 383, 513, 569, 577
Kpn2I TCCGGA 1 cut(s) 359
KroI GCCGGC 1 cut(s) 479
KroNI GCCGGC 1 cut(s) 481
Kzo9I GATC 2 cut(s) 15, 456
LguI GCTCTTC 1 cut(s) 418
LmnI GCTCC 2 cut(s) 136, 479
Lsp1109I GCAGC 1 cut(s) 513
LweI GCATC 1 cut(s) 307
MaeI CTAG 2 cut(s) 176, 596
MaeII ACGT 2 cut(s) 95, 402
MaeIII GTNAC 2 cut(s) 563, 618
MalI GATC 2 cut(s) 17, 458
MbiI CCGCTC 1 cut(s) 474
MboI GATC 2 cut(s) 15, 456
MboII GAAGA 2 cut(s) 188, 405
MhlI GDGCHC 2 cut(s) 64, 413
MlyI GAGTC 1 cut(s) 188
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 7 cut(s) 45, 78, 159, 367, 444, 527, 544
MroI TCCGGA 1 cut(s) 359
MroNI GCCGGC 1 cut(s) 479
MseI TTAA 3 cut(s) 98, 279, 573
MspCI CTTAAG 1 cut(s) 572
MspR9I CCNGG 2 cut(s) 13, 379
MvnI CGCG 4 cut(s) 294, 399, 513, 569
MwoI GCNNNNNNNGC 8 cut(s) 345, 380, 417, 468, 480, 507, 510, 551
NaeI GCCGGC 1 cut(s) 481
NciI CCSGG 2 cut(s) 13, 379
NdeII GATC 2 cut(s) 15, 456
NgoMIV GCCGGC 1 cut(s) 479
NlaIII CATG 1 cut(s) 292
NlaIV GGNNCC 4 cut(s) 43, 132, 428, 532
NmeAIII GCCGAG 2 cut(s) 466, 515
NmuCI GTSAC 1 cut(s) 563
PaqCI CACCTGC 1 cut(s) 599
PciSI GCTCTTC 1 cut(s) 418
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PdiI GCCGGC 1 cut(s) 481
PfeI GAWTC 4 cut(s) 73, 211, 271, 602
PkrI GCNGC 5 cut(s) 376, 422, 473, 503, 512
PleI GAGTC 1 cut(s) 187
PpsI GAGTC 1 cut(s) 187
PshAI GACNNNNGTC 1 cut(s) 178
Psp1406I AACGTT 1 cut(s) 95
PspN4I GGNNCC 4 cut(s) 43, 132, 428, 532
PspPI GGNCC 5 cut(s) 42, 354, 372, 426, 531
RsaI GTAC 1 cut(s) 331
RsaNI GTAC 1 cut(s) 330
SapI GCTCTTC 1 cut(s) 418
SaqAI TTAA 3 cut(s) 98, 279, 573
SatI GCNGC 5 cut(s) 375, 421, 472, 502, 511
Sau3AI GATC 2 cut(s) 15, 456
Sau96I GGNCC 5 cut(s) 42, 354, 372, 426, 531
SchI GAGTC 1 cut(s) 188
ScrFI CCNGG 2 cut(s) 13, 379
SduI GDGCHC 2 cut(s) 64, 413
SfaNI GCATC 1 cut(s) 307
SinI GGWCC 3 cut(s) 42, 354, 426
SmlI CTYRAG 2 cut(s) 152, 572
SmoI CTYRAG 2 cut(s) 152, 572
SspMI CTAG 2 cut(s) 176, 596
StyD4I CCNGG 2 cut(s) 11, 377
StyI CCWWGG 2 cut(s) 231, 305
TaaI ACNGT 1 cut(s) 266
TaiI ACGT 2 cut(s) 98, 405
TaqII GACCGA 1 cut(s) 342
TauI GCSGC 4 cut(s) 377, 423, 474, 513
TfiI GAWTC 4 cut(s) 73, 211, 271, 602
Tru1I TTAA 3 cut(s) 98, 279, 573
Tru9I TTAA 3 cut(s) 98, 279, 573
TscAI CASTG 4 cut(s) 38, 64, 271, 459
TseFI GTSAC 1 cut(s) 563
TseI GCWGC 1 cut(s) 501
Tsp45I GTSAC 1 cut(s) 563
TspDTI ATGAA 1 cut(s) 277
TspGWI ACGGA 1 cut(s) 93
TspRI CASTG 4 cut(s) 38, 64, 271, 459
Vha464I CTTAAG 1 cut(s) 572
VpaK11BI GGWCC 3 cut(s) 42, 354, 426
XmiI GTMKAC 1 cut(s) 256
XspI CTAG 2 cut(s) 176, 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.