Rroxscaffold_66G00437820

DNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000066
OG0000098
Physical Location & Seq
Reverse (-)
187026 .. 188137
1112 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_66G00437820.1

Sequence Viewer

Length: 660 bp
ATGTCTTCCGCCGGATCGGCCGCCGAAGCGAGTGCTTTGGGTCCAAAAAGAGGGCGGTGCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCGATTACGCAAGCCCGTTCCCTTGGCGTGGTTTCGCCGGATAGTAGACGGGGACGGCTGTTCACCTTGGAGACCGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACGGACACCACGCGACGTGCGGTGCTCTTCCGGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCGGGGTGGGCGGTGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGGAATTTTAACCCGATTCCCTTTCGAAGTTCGCGCGAGACGCGCTATCGGACGGGGTTACCCGGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

219

Amino Acids

23.63

Weight (kDa)

11.17

Isoelectric Point (pI)

53.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 470
AccB1I GGYRCC 1 cut(s) 57
AccI GTMKAC 1 cut(s) 250
AccII CGCG 5 cut(s) 206, 363, 547, 549, 556
AccIII TCCGGA 2 cut(s) 324, 472
AclI AACGTT 2 cut(s) 92, 485
AclWI GGATC 2 cut(s) 22, 595
AcoI YGGCCR 3 cut(s) 18, 382, 402
AcsI RAATTY 1 cut(s) 517
AcyI GRCGYC 1 cut(s) 467
AfaI GTAC 1 cut(s) 295
AfiI CCNNNNNNNGG 9 cut(s) 50, 74, 232, 387, 400, 416, 507, 513, 637
AgsI TTSAA 2 cut(s) 334, 646
AjiI CACGTC 2 cut(s) 367, 504
AluBI AGCT 1 cut(s) 183
AluI AGCT 1 cut(s) 183
Alw21I GWGCWC 1 cut(s) 377
Alw26I GTCTC 4 cut(s) 269, 474, 545, 584
AlwI GGATC 2 cut(s) 22, 595
Ama87I CYCGRG 1 cut(s) 452
Aor13HI TCCGGA 2 cut(s) 324, 472
AoxI GGCC 6 cut(s) 18, 337, 382, 402, 456, 639
ApoI RAATTY 1 cut(s) 517
AspLEI GCGC 3 cut(s) 350, 549, 558
AspS9I GGNCC 5 cut(s) 41, 319, 337, 390, 457
AsuC2I CCSGG 5 cut(s) 301, 344, 417, 508, 576
AsuHPI GGTGA 1 cut(s) 259
AsuII TTCGAA 1 cut(s) 538
AvaI CYCGRG 1 cut(s) 452
AvaII GGWCC 3 cut(s) 41, 319, 390
BaeGI GKGCMC 1 cut(s) 62
BanI GGYRCC 1 cut(s) 57
BbsI GAAGAC 1 cut(s) 186
Bbv12I GWGCWC 1 cut(s) 377
BceAI ACGGC 4 cut(s) 275, 394, 475, 596
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BcnI CCSGG 5 cut(s) 301, 344, 417, 508, 576
BcoDI GTCTC 4 cut(s) 269, 474, 545, 584
BfaI CTAG 1 cut(s) 173
BglI GCCNNNNNGGC 2 cut(s) 17, 345
BisI GCNGC 3 cut(s) 21, 340, 385
BlsI GCNGC 3 cut(s) 22, 341, 386
Bme1390I CCNGG 5 cut(s) 301, 344, 417, 508, 576
Bme18I GGWCC 3 cut(s) 41, 319, 390
BmeT110I CYCGRG 1 cut(s) 452
BmgBI CACGTC 2 cut(s) 367, 504
BmgT120I GGNCC 5 cut(s) 41, 319, 337, 390, 457
BmiI GGNNCC 6 cut(s) 42, 59, 129, 392, 459, 624
BmrFI CCNGG 5 cut(s) 301, 344, 417, 508, 576
BmsI GCATC 1 cut(s) 271
BoxI GACNNNNGTC 1 cut(s) 175
BpiI GAAGAC 1 cut(s) 186
BplI GAGNNNNNCTC 2 cut(s) 167, 199
Bpu14I TTCGAA 1 cut(s) 538
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 5 cut(s) 301, 344, 417, 508, 576
BsaHI GRCGYC 1 cut(s) 467
BsaI GGTCTC 2 cut(s) 269, 584
BsaJI CCNNGG 5 cut(s) 226, 270, 343, 416, 453
BsaWI WCCGGW 2 cut(s) 324, 472
BsaXI ACNNNNNCTCC 2 cut(s) 382, 412
Bsc4I CCNNNNNNNGG 9 cut(s) 50, 74, 232, 387, 400, 416, 507, 513, 637
BseAI TCCGGA 2 cut(s) 324, 472
BseDI CCNNGG 5 cut(s) 226, 270, 343, 416, 453
BseLI CCNNNNNNNGG 9 cut(s) 50, 74, 232, 387, 400, 416, 507, 513, 637
BseSI GKGCMC 1 cut(s) 62
BseX3I CGGCCG 3 cut(s) 18, 382, 402
Bsh1236I CGCG 5 cut(s) 206, 363, 547, 549, 556
Bsh1285I CGRYCG 4 cut(s) 21, 300, 385, 405
BshFI GGCC 6 cut(s) 20, 339, 384, 404, 458, 641
BshNI GGYRCC 1 cut(s) 57
BsiEI CGRYCG 4 cut(s) 21, 300, 385, 405
BsiHKAI GWGCWC 1 cut(s) 377
BsiHKCI CYCGRG 1 cut(s) 452
BslFI GGGAC 2 cut(s) 270, 490
BslI CCNNNNNNNGG 9 cut(s) 50, 74, 232, 387, 400, 416, 507, 513, 637
BsmAI GTCTC 4 cut(s) 269, 474, 545, 584
BsmBI CGTCTC 2 cut(s) 474, 545
BsmFI GGGAC 2 cut(s) 270, 490
BsnI GGCC 6 cut(s) 20, 339, 384, 404, 458, 641
Bso31I GGTCTC 2 cut(s) 269, 584
BsoBI CYCGRG 1 cut(s) 452
Bsp119I TTCGAA 1 cut(s) 538
Bsp1286I GDGCHC 2 cut(s) 62, 377
Bsp13I TCCGGA 2 cut(s) 324, 472
Bsp143I GATC 2 cut(s) 14, 587
BspANI GGCC 6 cut(s) 20, 339, 384, 404, 458, 641
BspEI TCCGGA 2 cut(s) 324, 472
BspFNI CGCG 5 cut(s) 206, 363, 547, 549, 556
BspLI GGNNCC 6 cut(s) 42, 59, 129, 392, 459, 624
BspPI GGATC 2 cut(s) 22, 595
BspQI GCTCTTC 1 cut(s) 382
BspT104I TTCGAA 1 cut(s) 538
BspT107I GGYRCC 1 cut(s) 57
BspTNI GGTCTC 2 cut(s) 269, 584
BssECI CCNNGG 5 cut(s) 226, 270, 343, 416, 453
BssMI GATC 2 cut(s) 14, 587
BssNI GRCGYC 1 cut(s) 467
BssT1I CCWWGG 2 cut(s) 226, 270
Bst6I CTCTTC 3 cut(s) 382, 453, 640
BstACI GRCGYC 1 cut(s) 467
BstBI TTCGAA 1 cut(s) 538
BstC8I GCNNGC 2 cut(s) 62, 216
BstDEI CTNAG 1 cut(s) 583
BstEII GGTNACC 1 cut(s) 570
BstFNI CGCG 5 cut(s) 206, 363, 547, 549, 556
BstHHI GCGC 3 cut(s) 350, 549, 558
BstKTI GATC 2 cut(s) 17, 590
BstMAI GTCTC 4 cut(s) 269, 474, 545, 584
BstMBI GATC 2 cut(s) 14, 587
BstMCI CGRYCG 4 cut(s) 21, 300, 385, 405
BstMWI GCNNNNNNNGC 8 cut(s) 17, 26, 61, 310, 345, 381, 553, 555
BstPAI GACNNNNGTC 1 cut(s) 175
BstPI GGTNACC 1 cut(s) 570
BstSCI CCNGG 5 cut(s) 299, 342, 415, 506, 574
BstSLI GKGCMC 1 cut(s) 62
BstUI CGCG 5 cut(s) 206, 363, 547, 549, 556
BstV2I GAAGAC 1 cut(s) 186
BstZI CGGCCG 3 cut(s) 18, 382, 402
BsuRI GGCC 6 cut(s) 20, 339, 384, 404, 458, 641
BtrI CACGTC 2 cut(s) 367, 504
Cac8I GCNNGC 2 cut(s) 62, 216
CfoI GCGC 3 cut(s) 350, 549, 558
Cfr13I GGNCC 5 cut(s) 41, 319, 337, 390, 457
CseI GACGC 1 cut(s) 562
Csp6I GTAC 1 cut(s) 294
CviAII CATG 2 cut(s) 600, 619
CviQI GTAC 1 cut(s) 294
DdeI CTNAG 1 cut(s) 583
DpnI GATC 2 cut(s) 16, 589
DpnII GATC 2 cut(s) 14, 587
EaeI YGGCCR 3 cut(s) 18, 382, 402
EagI CGGCCG 3 cut(s) 18, 382, 402
Eam1104I CTCTTC 3 cut(s) 382, 453, 640
EarI CTCTTC 3 cut(s) 382, 453, 640
EclXI CGGCCG 3 cut(s) 18, 382, 402
Eco130I CCWWGG 2 cut(s) 226, 270
Eco31I GGTCTC 2 cut(s) 269, 584
Eco47I GGWCC 3 cut(s) 41, 319, 390
Eco52I CGGCCG 3 cut(s) 18, 382, 402
Eco88I CYCGRG 1 cut(s) 452
Eco91I GGTNACC 1 cut(s) 570
EcoO109I RGGNCCY 1 cut(s) 457
EcoO65I GGTNACC 1 cut(s) 570
EcoT14I CCWWGG 2 cut(s) 226, 270
ErhI CCWWGG 2 cut(s) 226, 270
Esp3I CGTCTC 2 cut(s) 474, 545
FaeI CATG 2 cut(s) 603, 622
FaiI YATR 4 cut(s) 138, 290, 601, 620
FaqI GGGAC 2 cut(s) 270, 490
FatI CATG 2 cut(s) 599, 618
FauI CCCGC 3 cut(s) 69, 211, 468
FblI GTMKAC 1 cut(s) 250
Fnu4HI GCNGC 3 cut(s) 21, 340, 385
Fsp4HI GCNGC 3 cut(s) 21, 340, 385
FspBI CTAG 1 cut(s) 173
GlaI GCGC 3 cut(s) 349, 548, 557
GluI GCNGC 3 cut(s) 21, 340, 385
HaeIII GGCC 6 cut(s) 20, 339, 384, 404, 458, 641
HgaI GACGC 1 cut(s) 562
HhaI GCGC 3 cut(s) 350, 549, 558
Hin1I GRCGYC 1 cut(s) 467
Hin1II CATG 2 cut(s) 603, 622
Hin6I GCGC 3 cut(s) 348, 547, 556
HinP1I GCGC 3 cut(s) 348, 547, 556
HincII GTYRAC 1 cut(s) 495
HindII GTYRAC 1 cut(s) 495
HinfI GANTC 4 cut(s) 70, 176, 476, 529
HphI GGTGA 1 cut(s) 259
Hpy166II GTNNAC 4 cut(s) 251, 267, 495, 616
Hpy188I TCNGA 3 cut(s) 69, 170, 564
Hpy188III TCNNGA 4 cut(s) 325, 452, 473, 514
Hpy8I GTNNAC 4 cut(s) 251, 267, 495, 616
Hpy99I CGWCG 2 cut(s) 368, 469
HpyAV CCTTC 2 cut(s) 118, 652
HpyCH4IV ACGT 5 cut(s) 92, 366, 467, 485, 503
HpyCH4V TGCA 1 cut(s) 605
HpyF10VI GCNNNNNNNGC 8 cut(s) 17, 26, 61, 310, 345, 381, 553, 555
HpyF3I CTNAG 1 cut(s) 583
HpySE526I ACGT 5 cut(s) 92, 366, 467, 485, 503
Hsp92I GRCGYC 1 cut(s) 467
Hsp92II CATG 2 cut(s) 603, 622
HspAI GCGC 3 cut(s) 348, 547, 556
Kpn2I TCCGGA 2 cut(s) 324, 472
Kzo9I GATC 2 cut(s) 14, 587
LguI GCTCTTC 1 cut(s) 382
LmnI GCTCC 1 cut(s) 133
LweI GCATC 1 cut(s) 271
MaeI CTAG 1 cut(s) 173
MaeII ACGT 5 cut(s) 92, 366, 467, 485, 503
MaeIII GTNAC 1 cut(s) 570
MalI GATC 2 cut(s) 16, 589
MboI GATC 2 cut(s) 14, 587
MboII GAAGA 4 cut(s) 186, 369, 440, 627
MhlI GDGCHC 2 cut(s) 62, 377
MluCI AATT 1 cut(s) 517
MlyI GAGTC 2 cut(s) 185, 470
MmeI TCCRAC 1 cut(s) 148
MnlI CCTC 7 cut(s) 44, 75, 156, 332, 408, 448, 643
MroI TCCGGA 2 cut(s) 324, 472
MseI TTAA 3 cut(s) 95, 431, 522
MspR9I CCNGG 5 cut(s) 301, 344, 417, 508, 576
MvnI CGCG 5 cut(s) 206, 363, 547, 549, 556
MwoI GCNNNNNNNGC 8 cut(s) 17, 26, 61, 310, 345, 381, 553, 555
NciI CCSGG 5 cut(s) 301, 344, 417, 508, 576
NdeII GATC 2 cut(s) 14, 587
NlaIII CATG 2 cut(s) 603, 622
NlaIV GGNNCC 6 cut(s) 42, 59, 129, 392, 459, 624
NmeAIII GCCGAG 1 cut(s) 430
NspV TTCGAA 1 cut(s) 538
PciSI GCTCTTC 1 cut(s) 382
PfeI GAWTC 2 cut(s) 70, 529
PkrI GCNGC 3 cut(s) 22, 341, 386
PleI GAGTC 2 cut(s) 184, 470
PpsI GAGTC 2 cut(s) 184, 470
PshAI GACNNNNGTC 1 cut(s) 175
Psp1406I AACGTT 2 cut(s) 92, 485
PspEI GGTNACC 1 cut(s) 570
PspN4I GGNNCC 6 cut(s) 42, 59, 129, 392, 459, 624
PspPI GGNCC 5 cut(s) 41, 319, 337, 390, 457
RsaI GTAC 1 cut(s) 295
RsaNI GTAC 1 cut(s) 294
SapI GCTCTTC 1 cut(s) 382
SaqAI TTAA 3 cut(s) 95, 431, 522
SatI GCNGC 3 cut(s) 21, 340, 385
Sau3AI GATC 2 cut(s) 14, 587
Sau96I GGNCC 5 cut(s) 41, 319, 337, 390, 457
SchI GAGTC 2 cut(s) 185, 470
ScrFI CCNGG 5 cut(s) 301, 344, 417, 508, 576
SduI GDGCHC 2 cut(s) 62, 377
SfaNI GCATC 1 cut(s) 271
SfuI TTCGAA 1 cut(s) 538
SinI GGWCC 3 cut(s) 41, 319, 390
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 1 cut(s) 517
SspMI CTAG 1 cut(s) 173
StyD4I CCNGG 5 cut(s) 299, 342, 415, 506, 574
StyI CCWWGG 2 cut(s) 226, 270
TaiI ACGT 5 cut(s) 95, 369, 470, 488, 506
TaqI TCGA 2 cut(s) 538, 590
TaqII GACCGA 2 cut(s) 293, 307
TasI AATT 1 cut(s) 517
TauI GCSGC 3 cut(s) 23, 342, 387
TfiI GAWTC 2 cut(s) 70, 529
Tru1I TTAA 3 cut(s) 95, 431, 522
Tru9I TTAA 3 cut(s) 95, 431, 522
TspGWI ACGGA 2 cut(s) 90, 367
VpaK11BI GGWCC 3 cut(s) 41, 319, 390
XapI RAATTY 1 cut(s) 517
XmiI GTMKAC 1 cut(s) 250
XspI CTAG 1 cut(s) 173
ZraI GACGTC 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.