Rroxscaffold_17G00435500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000017
OG0000098
Physical Location & Seq
Forward (+)
90622 .. 91162
541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_17G00435500.1

Sequence Viewer

Length: 507 bp
ATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGCGCTGCCGGACACCACGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGGCGAGCCGTTTCCGGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCGCCGACGTCTCGGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGTTCGCGCGAGACGCGCTATCGGACGGGGTTACCCGGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCGGGCTCACGCCCCGGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGCGGGGGTATAGGTCACGCGCTTAGCGCCATCCATTTCGGGGCTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

168

Amino Acids

18.17

Weight (kDa)

11.68

Isoelectric Point (pI)

52.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 186
AccBSI CCGCTC 1 cut(s) 380
AccII CGCG 7 cut(s) 76, 229, 231, 238, 420, 459, 476
AccIII TCCGGA 1 cut(s) 36
AclI AACGTT 1 cut(s) 200
AclWI GGATC 1 cut(s) 277
AcoI YGGCCR 2 cut(s) 95, 375
AcyI GRCGYC 1 cut(s) 183
AfaI GTAC 1 cut(s) 7
AfiI CCNNNNNNNGG 7 cut(s) 100, 113, 129, 458, 459, 460, 496
AgsI TTSAA 3 cut(s) 46, 327, 341
AjiI CACGTC 2 cut(s) 80, 219
AjnI CCWGG 1 cut(s) 440
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 3 cut(s) 190, 227, 266
AlwI GGATC 1 cut(s) 277
Ama87I CYCGRG 2 cut(s) 168, 398
Aor13HI TCCGGA 1 cut(s) 36
AoxI GGCC 6 cut(s) 49, 95, 172, 320, 375, 438
ApeKI GCWGC 1 cut(s) 61
AspLEI GCGC 6 cut(s) 61, 231, 240, 422, 478, 485
AspS9I GGNCC 5 cut(s) 31, 49, 103, 173, 438
AsuC2I CCSGG 8 cut(s) 13, 56, 115, 130, 258, 387, 399, 400
AvaI CYCGRG 2 cut(s) 168, 398
AvaII GGWCC 2 cut(s) 31, 103
BanII GRGCYC 1 cut(s) 392
Bbv12I GWGCWC 1 cut(s) 90
BbvI GCAGC 1 cut(s) 48
BccI CCATC 1 cut(s) 494
BceAI ACGGC 4 cut(s) 107, 190, 278, 390
BciT130I CCWGG 1 cut(s) 442
BcnI CCSGG 8 cut(s) 13, 56, 115, 130, 258, 387, 399, 400
BcoDI GTCTC 3 cut(s) 190, 227, 266
BfaI CTAG 1 cut(s) 501
BfoI RGCGCY 2 cut(s) 62, 486
BglII AGATCT 1 cut(s) 362
BisI GCNGC 6 cut(s) 52, 62, 98, 378, 409, 418
BlpI GCTNAGC 1 cut(s) 479
BlsI GCNGC 6 cut(s) 53, 63, 99, 379, 410, 419
Bme1390I CCNGG 9 cut(s) 13, 56, 115, 130, 258, 387, 399, 400, 442
Bme18I GGWCC 2 cut(s) 31, 103
BmeT110I CYCGRG 2 cut(s) 168, 398
BmgBI CACGTC 2 cut(s) 80, 219
BmgT120I GGNCC 5 cut(s) 31, 49, 103, 173, 438
BmiI GGNNCC 4 cut(s) 105, 175, 306, 439
BmrFI CCNGG 9 cut(s) 13, 56, 115, 130, 258, 387, 399, 400, 442
Bpu1102I GCTNAGC 1 cut(s) 479
BpuMI CCSGG 8 cut(s) 13, 56, 115, 130, 258, 387, 399, 400
BsaHI GRCGYC 1 cut(s) 183
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 4 cut(s) 129, 169, 397, 398
BsaWI WCCGGW 1 cut(s) 36
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 364, 394
Bsc4I CCNNNNNNNGG 7 cut(s) 100, 113, 129, 458, 459, 460, 496
BseAI TCCGGA 1 cut(s) 36
BseBI CCWGG 1 cut(s) 442
BseDI CCNNGG 4 cut(s) 129, 169, 397, 398
BseGI GGATG 1 cut(s) 486
BseLI CCNNNNNNNGG 7 cut(s) 100, 113, 129, 458, 459, 460, 496
BseX3I CGGCCG 2 cut(s) 95, 375
BseXI GCAGC 1 cut(s) 48
BsgI GTGCAG 1 cut(s) 351
Bsh1236I CGCG 7 cut(s) 76, 229, 231, 238, 420, 459, 476
Bsh1285I CGRYCG 4 cut(s) 12, 98, 378, 415
BshFI GGCC 6 cut(s) 51, 97, 174, 322, 377, 440
BsiEI CGRYCG 4 cut(s) 12, 98, 378, 415
BsiHKAI GWGCWC 1 cut(s) 90
BsiHKCI CYCGRG 2 cut(s) 168, 398
BslFI GGGAC 1 cut(s) 205
BslI CCNNNNNNNGG 7 cut(s) 100, 113, 129, 458, 459, 460, 496
BsmAI GTCTC 3 cut(s) 190, 227, 266
BsmBI CGTCTC 2 cut(s) 190, 227
BsmFI GGGAC 1 cut(s) 205
BsnI GGCC 6 cut(s) 51, 97, 174, 322, 377, 440
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 2 cut(s) 168, 398
Bsp1286I GDGCHC 2 cut(s) 90, 392
Bsp13I TCCGGA 1 cut(s) 36
Bsp143I GATC 2 cut(s) 269, 362
Bsp1720I GCTNAGC 1 cut(s) 479
BspANI GGCC 6 cut(s) 51, 97, 174, 322, 377, 440
BspEI TCCGGA 1 cut(s) 36
BspFNI CGCG 7 cut(s) 76, 229, 231, 238, 420, 459, 476
BspLI GGNNCC 4 cut(s) 105, 175, 306, 439
BspPI GGATC 1 cut(s) 277
BspQI GCTCTTC 1 cut(s) 95
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 380
BssECI CCNNGG 4 cut(s) 129, 169, 397, 398
BssMI GATC 2 cut(s) 269, 362
BssNI GRCGYC 1 cut(s) 183
Bst2UI CCWGG 1 cut(s) 442
Bst6I CTCTTC 3 cut(s) 95, 169, 321
BstACI GRCGYC 1 cut(s) 183
BstC8I GCNNGC 2 cut(s) 120, 140
BstDEI CTNAG 2 cut(s) 265, 479
BstEII GGTNACC 1 cut(s) 252
BstF5I GGATG 1 cut(s) 486
BstFNI CGCG 7 cut(s) 76, 229, 231, 238, 420, 459, 476
BstH2I RGCGCY 2 cut(s) 62, 486
BstHHI GCGC 6 cut(s) 61, 231, 240, 422, 478, 485
BstKTI GATC 2 cut(s) 272, 365
BstMAI GTCTC 3 cut(s) 190, 227, 266
BstMBI GATC 2 cut(s) 269, 362
BstMCI CGRYCG 4 cut(s) 12, 98, 378, 415
BstMWI GCNNNNNNNGC 8 cut(s) 22, 94, 235, 237, 374, 414, 417, 482
BstNI CCWGG 1 cut(s) 442
BstPI GGTNACC 1 cut(s) 252
BstSCI CCNGG 9 cut(s) 11, 54, 113, 128, 256, 385, 397, 398, 440
BstUI CGCG 7 cut(s) 76, 229, 231, 238, 420, 459, 476
BstV1I GCAGC 1 cut(s) 48
BstX2I RGATCY 1 cut(s) 362
BstYI RGATCY 1 cut(s) 362
BstZI CGGCCG 2 cut(s) 95, 375
BsuRI GGCC 6 cut(s) 51, 97, 174, 322, 377, 440
BtrI CACGTC 2 cut(s) 80, 219
BtsCI GGATG 1 cut(s) 486
Cac8I GCNNGC 2 cut(s) 120, 140
CfoI GCGC 6 cut(s) 61, 231, 240, 422, 478, 485
Cfr13I GGNCC 5 cut(s) 31, 49, 103, 173, 438
Cfr9I CCCGGG 1 cut(s) 398
CseI GACGC 2 cut(s) 244, 465
Csp6I GTAC 1 cut(s) 6
CviAII CATG 2 cut(s) 282, 301
CviQI GTAC 1 cut(s) 6
DdeI CTNAG 2 cut(s) 265, 479
DpnI GATC 2 cut(s) 271, 364
DpnII GATC 2 cut(s) 269, 362
EaeI YGGCCR 2 cut(s) 95, 375
EagI CGGCCG 2 cut(s) 95, 375
Eam1104I CTCTTC 3 cut(s) 95, 169, 321
EarI CTCTTC 3 cut(s) 95, 169, 321
EciI GGCGGA 1 cut(s) 372
EclXI CGGCCG 2 cut(s) 95, 375
Eco24I GRGCYC 1 cut(s) 392
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 2 cut(s) 31, 103
Eco52I CGGCCG 2 cut(s) 95, 375
Eco88I CYCGRG 2 cut(s) 168, 398
Eco91I GGTNACC 1 cut(s) 252
EcoO109I RGGNCCY 2 cut(s) 173, 438
EcoO65I GGTNACC 1 cut(s) 252
EcoRII CCWGG 1 cut(s) 440
EcoT38I GRGCYC 1 cut(s) 392
Esp3I CGTCTC 2 cut(s) 190, 227
FaeI CATG 2 cut(s) 285, 304
FaiI YATR 3 cut(s) 283, 302, 467
FaqI GGGAC 1 cut(s) 205
FatI CATG 2 cut(s) 281, 300
FauI CCCGC 2 cut(s) 184, 452
Fnu4HI GCNGC 6 cut(s) 52, 62, 98, 378, 409, 418
FokI GGATG 1 cut(s) 473
FriOI GRGCYC 1 cut(s) 392
Fsp4HI GCNGC 6 cut(s) 52, 62, 98, 378, 409, 418
FspBI CTAG 1 cut(s) 501
GlaI GCGC 6 cut(s) 60, 230, 239, 421, 477, 484
GluI GCNGC 6 cut(s) 52, 62, 98, 378, 409, 418
HaeII RGCGCY 2 cut(s) 62, 486
HaeIII GGCC 6 cut(s) 51, 97, 174, 322, 377, 440
HgaI GACGC 2 cut(s) 244, 465
HhaI GCGC 6 cut(s) 61, 231, 240, 422, 478, 485
Hin1I GRCGYC 1 cut(s) 183
Hin1II CATG 2 cut(s) 285, 304
Hin6I GCGC 6 cut(s) 59, 229, 238, 420, 476, 483
HinP1I GCGC 6 cut(s) 59, 229, 238, 420, 476, 483
HincII GTYRAC 1 cut(s) 210
HindII GTYRAC 1 cut(s) 210
HinfI GANTC 1 cut(s) 191
Hpy166II GTNNAC 2 cut(s) 210, 298
Hpy188I TCNGA 2 cut(s) 190, 246
Hpy188III TCNNGA 2 cut(s) 37, 168
Hpy8I GTNNAC 2 cut(s) 210, 298
Hpy99I CGWCG 4 cut(s) 81, 185, 376, 459
HpyAV CCTTC 1 cut(s) 333
HpyCH4IV ACGT 4 cut(s) 79, 183, 200, 218
HpyCH4V TGCA 2 cut(s) 287, 368
HpyF10VI GCNNNNNNNGC 8 cut(s) 22, 94, 235, 237, 374, 414, 417, 482
HpyF3I CTNAG 2 cut(s) 265, 479
HpySE526I ACGT 4 cut(s) 79, 183, 200, 218
Hsp92I GRCGYC 1 cut(s) 183
Hsp92II CATG 2 cut(s) 285, 304
HspAI GCGC 6 cut(s) 59, 229, 238, 420, 476, 483
Kpn2I TCCGGA 1 cut(s) 36
Kzo9I GATC 2 cut(s) 269, 362
LguI GCTCTTC 1 cut(s) 95
LmnI GCTCC 1 cut(s) 385
Lsp1109I GCAGC 1 cut(s) 48
MaeI CTAG 1 cut(s) 501
MaeII ACGT 4 cut(s) 79, 183, 200, 218
MaeIII GTNAC 2 cut(s) 252, 470
MalI GATC 2 cut(s) 271, 364
MbiI CCGCTC 1 cut(s) 380
MboI GATC 2 cut(s) 269, 362
MboII GAAGA 3 cut(s) 82, 156, 308
MflI RGATCY 1 cut(s) 362
MhlI GDGCHC 2 cut(s) 90, 392
MlyI GAGTC 1 cut(s) 185
MnlI CCTC 5 cut(s) 44, 121, 164, 324, 434
MroI TCCGGA 1 cut(s) 36
MseI TTAA 1 cut(s) 146
MspA1I CMGCKG 1 cut(s) 100
MspR9I CCNGG 9 cut(s) 13, 56, 115, 130, 258, 387, 399, 400, 442
MvaI CCWGG 1 cut(s) 442
MvnI CGCG 7 cut(s) 76, 229, 231, 238, 420, 459, 476
MwoI GCNNNNNNNGC 8 cut(s) 22, 94, 235, 237, 374, 414, 417, 482
NciI CCSGG 8 cut(s) 13, 56, 115, 130, 258, 387, 399, 400
NdeII GATC 2 cut(s) 269, 362
NlaIII CATG 2 cut(s) 285, 304
NlaIV GGNNCC 4 cut(s) 105, 175, 306, 439
NmuCI GTSAC 1 cut(s) 470
PciSI GCTCTTC 1 cut(s) 95
PkrI GCNGC 6 cut(s) 53, 63, 99, 379, 410, 419
PleI GAGTC 1 cut(s) 185
PpsI GAGTC 1 cut(s) 185
Psp1406I AACGTT 1 cut(s) 200
Psp6I CCWGG 1 cut(s) 440
PspEI GGTNACC 1 cut(s) 252
PspGI CCWGG 1 cut(s) 440
PspN4I GGNNCC 4 cut(s) 105, 175, 306, 439
PspPI GGNCC 5 cut(s) 31, 49, 103, 173, 438
PsuI RGATCY 1 cut(s) 362
RsaI GTAC 1 cut(s) 7
RsaNI GTAC 1 cut(s) 6
SapI GCTCTTC 1 cut(s) 95
SaqAI TTAA 1 cut(s) 146
SatI GCNGC 6 cut(s) 52, 62, 98, 378, 409, 418
Sau3AI GATC 2 cut(s) 269, 362
Sau96I GGNCC 5 cut(s) 31, 49, 103, 173, 438
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 9 cut(s) 13, 56, 115, 130, 258, 387, 399, 400, 442
SduI GDGCHC 2 cut(s) 90, 392
SetI ASST 7 cut(s) 82, 113, 186, 203, 221, 310, 472
SinI GGWCC 2 cut(s) 31, 103
SmaI CCCGGG 1 cut(s) 400
SspI AATATT 1 cut(s) 344
SspMI CTAG 1 cut(s) 501
StyD4I CCNGG 9 cut(s) 11, 54, 113, 128, 256, 385, 397, 398, 440
TaiI ACGT 4 cut(s) 82, 186, 203, 221
TaqI TCGA 1 cut(s) 272
TaqII GACCGA 1 cut(s) 19
TauI GCSGC 5 cut(s) 54, 100, 380, 411, 420
Tru1I TTAA 1 cut(s) 146
Tru9I TTAA 1 cut(s) 146
TseFI GTSAC 1 cut(s) 470
TseI GCWGC 1 cut(s) 61
Tsp45I GTSAC 1 cut(s) 470
TspMI CCCGGG 1 cut(s) 398
VpaK11BI GGWCC 2 cut(s) 31, 103
XmaI CCCGGG 1 cut(s) 398
XspI CTAG 1 cut(s) 501
ZraI GACGTC 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.