Rroxscaffold_27G00446600

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000027
OG0000098
Physical Location & Seq
Forward (+)
27645 .. 29348
1704 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_27G00446600.1

Sequence Viewer

Length: 837 bp
ATGGAAGGGGGAGGGACGAATCGAAGCGACGCAGGGCTGAATCTCGCGGATCGTGGCAGCAAGGCCACTCGCCACTTACAATACCCCGTCGCGTATTTAAGTCGTCTCGCAAAGGATTCTACCCGCCGCTCGGTAGAAATTGTAATTCAAGGCGGCCCTCGCAGCTTGTCCGCCGTGAGGGCTTCACCAACGACACGTGCCTTTGGGGGCCTAGGGCCCCTACCGCGGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTCGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTTATCCCCGTGTCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCCCTCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTCGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

278

Amino Acids

30.64

Weight (kDa)

11.34

Isoelectric Point (pI)

63.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 302, 789
AccBSI CCGCTC 2 cut(s) 129, 509
AccI GTMKAC 1 cut(s) 437
AccII CGCG 6 cut(s) 47, 92, 226, 499, 518, 765
AccIII TCCGGA 1 cut(s) 726
AclWI GGATC 4 cut(s) 57, 356, 609, 622
AcoI YGGCCR 2 cut(s) 490, 804
AcsI RAATTY 1 cut(s) 308
AcvI CACGTG 1 cut(s) 197
AdeI CACNNNGTG 1 cut(s) 305
AfaI GTAC 2 cut(s) 424, 698
AflIII ACRYGT 1 cut(s) 194
AgsI TTSAA 3 cut(s) 149, 446, 736
AjiI CACGTC 1 cut(s) 769
AjnI CCWGG 1 cut(s) 817
AluBI AGCT 3 cut(s) 165, 266, 527
AluI AGCT 3 cut(s) 165, 266, 527
Alw21I GWGCWC 1 cut(s) 779
Alw26I GTCTC 3 cut(s) 110, 249, 671
AlwI GGATC 4 cut(s) 57, 356, 609, 622
AlwNI CAGNNNCTG 1 cut(s) 789
Ama87I CYCGRG 4 cut(s) 451, 528, 563, 603
Aor13HI TCCGGA 1 cut(s) 726
AoxI GGCC 7 cut(s) 63, 154, 208, 215, 490, 739, 804
ApaI GGGCCC 1 cut(s) 219
ApeKI GCWGC 5 cut(s) 57, 162, 380, 524, 588
ApoI RAATTY 1 cut(s) 308
AspA2I CCTAGG 1 cut(s) 211
AspLEI GCGC 1 cut(s) 752
AspS9I GGNCC 8 cut(s) 155, 208, 215, 216, 567, 721, 739, 792
AsuC2I CCSGG 4 cut(s) 452, 453, 489, 746
AsuHPI GGTGA 5 cut(s) 177, 298, 317, 530, 661
AvaI CYCGRG 4 cut(s) 451, 528, 563, 603
AvaII GGWCC 3 cut(s) 567, 721, 792
AvrII CCTAGG 1 cut(s) 211
BaeGI GKGCMC 2 cut(s) 219, 579
BamHI GGATCC 1 cut(s) 614
BanII GRGCYC 1 cut(s) 219
BbrPI CACGTG 1 cut(s) 197
Bbv12I GWGCWC 1 cut(s) 779
BbvI GCAGC 5 cut(s) 69, 174, 367, 536, 600
BceAI ACGGC 2 cut(s) 158, 796
BciT130I CCWGG 1 cut(s) 819
BcnI CCSGG 4 cut(s) 452, 453, 489, 746
BcoDI GTCTC 3 cut(s) 110, 249, 671
BfaI CTAG 1 cut(s) 212
BglI GCCNNNNNGGC 2 cut(s) 179, 747
BlnI CCTAGG 1 cut(s) 211
Bme1390I CCNGG 5 cut(s) 452, 453, 489, 746, 819
Bme18I GGWCC 3 cut(s) 567, 721, 792
BmeT110I CYCGRG 4 cut(s) 451, 528, 563, 603
BmgBI CACGTC 1 cut(s) 769
BmgT120I GGNCC 8 cut(s) 155, 208, 215, 216, 567, 721, 739, 792
BmiI GGNNCC 7 cut(s) 209, 217, 218, 568, 569, 616, 794
BmrFI CCNGG 5 cut(s) 452, 453, 489, 746, 819
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 1 cut(s) 674
BmuI ACTGGG 1 cut(s) 472
BpuMI CCSGG 4 cut(s) 452, 453, 489, 746
BsaAI YACGTR 1 cut(s) 197
BsaI GGTCTC 1 cut(s) 671
BsaJI CCNNGG 8 cut(s) 211, 224, 451, 516, 604, 672, 745, 818
BsaWI WCCGGW 1 cut(s) 726
BsaXI ACNNNNNCTCC 2 cut(s) 784, 814
Bse118I RCCGGY 1 cut(s) 702
Bse1I ACTGG 2 cut(s) 426, 478
BseAI TCCGGA 1 cut(s) 726
BseBI CCWGG 1 cut(s) 819
BseDI CCNNGG 8 cut(s) 211, 224, 451, 516, 604, 672, 745, 818
BseNI ACTGG 2 cut(s) 426, 478
BseSI GKGCMC 2 cut(s) 219, 579
BseX3I CGGCCG 2 cut(s) 490, 804
BseXI GCAGC 5 cut(s) 69, 174, 367, 536, 600
BseYI CCCAGC 2 cut(s) 262, 578
Bsh1236I CGCG 6 cut(s) 47, 92, 226, 499, 518, 765
Bsh1285I CGRYCG 4 cut(s) 441, 493, 703, 807
BshFI GGCC 7 cut(s) 65, 156, 210, 217, 492, 741, 806
BsiEI CGRYCG 4 cut(s) 441, 493, 703, 807
BsiHKAI GWGCWC 1 cut(s) 779
BsiHKCI CYCGRG 4 cut(s) 451, 528, 563, 603
BsiSI CCGG 6 cut(s) 452, 489, 703, 727, 745, 803
BslFI GGGAC 4 cut(s) 28, 466, 573, 580
BsmAI GTCTC 3 cut(s) 110, 249, 671
BsmBI CGTCTC 1 cut(s) 110
BsmFI GGGAC 4 cut(s) 28, 466, 573, 580
BsnI GGCC 7 cut(s) 65, 156, 210, 217, 492, 741, 806
Bso31I GGTCTC 1 cut(s) 671
BsoBI CYCGRG 4 cut(s) 451, 528, 563, 603
Bsp120I GGGCCC 1 cut(s) 215
Bsp1286I GDGCHC 3 cut(s) 219, 579, 779
Bsp13I TCCGGA 1 cut(s) 726
Bsp143I GATC 3 cut(s) 49, 348, 614
BspANI GGCC 7 cut(s) 65, 156, 210, 217, 492, 741, 806
BspEI TCCGGA 1 cut(s) 726
BspFNI CGCG 6 cut(s) 47, 92, 226, 499, 518, 765
BspLI GGNNCC 7 cut(s) 209, 217, 218, 568, 569, 616, 794
BspPI GGATC 4 cut(s) 57, 356, 609, 622
BspQI GCTCTTC 2 cut(s) 326, 784
BspTNI GGTCTC 1 cut(s) 671
BsrBI CCGCTC 2 cut(s) 129, 509
BsrFI RCCGGY 1 cut(s) 702
BsrI ACTGG 2 cut(s) 426, 478
BssAI RCCGGY 1 cut(s) 702
BssECI CCNNGG 8 cut(s) 211, 224, 451, 516, 604, 672, 745, 818
BssMI GATC 3 cut(s) 49, 348, 614
BssT1I CCWWGG 2 cut(s) 211, 672
Bst2UI CCWGG 1 cut(s) 819
Bst4CI ACNGT 2 cut(s) 254, 442
Bst6I CTCTTC 2 cut(s) 326, 784
BstBAI YACGTR 1 cut(s) 197
BstC8I GCNNGC 3 cut(s) 497, 661, 829
BstDSI CCRYGG 2 cut(s) 224, 516
BstFNI CGCG 6 cut(s) 47, 92, 226, 499, 518, 765
BstHHI GCGC 1 cut(s) 752
BstKTI GATC 3 cut(s) 52, 351, 617
BstMAI GTCTC 3 cut(s) 110, 249, 671
BstMBI GATC 3 cut(s) 49, 348, 614
BstMCI CGRYCG 4 cut(s) 441, 493, 703, 807
BstNI CCWGG 1 cut(s) 819
BstSCI CCNGG 5 cut(s) 450, 451, 487, 744, 817
BstSLI GKGCMC 2 cut(s) 219, 579
BstUI CGCG 6 cut(s) 47, 92, 226, 499, 518, 765
BstV1I GCAGC 5 cut(s) 69, 174, 367, 536, 600
BstX2I RGATCY 1 cut(s) 614
BstYI RGATCY 1 cut(s) 614
BstZI CGGCCG 2 cut(s) 490, 804
BsuRI GGCC 7 cut(s) 65, 156, 210, 217, 492, 741, 806
BtgI CCRYGG 2 cut(s) 224, 516
BtrI CACGTC 1 cut(s) 769
Cac8I GCNNGC 3 cut(s) 497, 661, 829
CaiI CAGNNNCTG 1 cut(s) 789
CfoI GCGC 1 cut(s) 752
Cfr10I RCCGGY 1 cut(s) 702
Cfr13I GGNCC 8 cut(s) 155, 208, 215, 216, 567, 721, 739, 792
Cfr42I CCGCGG 2 cut(s) 227, 519
Cfr9I CCCGGG 1 cut(s) 451
CseI GACGC 1 cut(s) 38
Csp6I GTAC 2 cut(s) 423, 697
CviQI GTAC 2 cut(s) 423, 697
DpnI GATC 3 cut(s) 51, 350, 616
DpnII GATC 3 cut(s) 49, 348, 614
DraIII CACNNNGTG 1 cut(s) 305
EaeI YGGCCR 2 cut(s) 490, 804
EagI CGGCCG 2 cut(s) 490, 804
Eam1104I CTCTTC 2 cut(s) 326, 784
EarI CTCTTC 2 cut(s) 326, 784
EciI GGCGGA 1 cut(s) 160
EclXI CGGCCG 2 cut(s) 490, 804
Eco130I CCWWGG 2 cut(s) 211, 672
Eco24I GRGCYC 1 cut(s) 219
Eco31I GGTCTC 1 cut(s) 671
Eco47I GGWCC 3 cut(s) 567, 721, 792
Eco52I CGGCCG 2 cut(s) 490, 804
Eco72I CACGTG 1 cut(s) 197
Eco88I CYCGRG 4 cut(s) 451, 528, 563, 603
EcoO109I RGGNCCY 4 cut(s) 208, 215, 216, 567
EcoRI GAATTC 1 cut(s) 308
EcoRII CCWGG 1 cut(s) 817
EcoT14I CCWWGG 2 cut(s) 211, 672
EcoT38I GRGCYC 1 cut(s) 219
ErhI CCWWGG 2 cut(s) 211, 672
Esp3I CGTCTC 1 cut(s) 110
FaiI YATR 2 cut(s) 369, 693
FaqI GGGAC 4 cut(s) 28, 466, 573, 580
FauI CCCGC 3 cut(s) 131, 219, 514
FblI GTMKAC 1 cut(s) 437
FriOI GRGCYC 1 cut(s) 219
FspBI CTAG 1 cut(s) 212
GlaI GCGC 1 cut(s) 751
GsaI CCCAGC 2 cut(s) 266, 582
HaeIII GGCC 7 cut(s) 65, 156, 210, 217, 492, 741, 806
HapII CCGG 6 cut(s) 452, 489, 703, 727, 745, 803
HgaI GACGC 1 cut(s) 38
HhaI GCGC 1 cut(s) 752
Hin6I GCGC 1 cut(s) 750
HinP1I GCGC 1 cut(s) 750
HincII GTYRAC 1 cut(s) 438
HindII GTYRAC 1 cut(s) 438
HinfI GANTC 6 cut(s) 19, 40, 116, 409, 434, 561
HpaII CCGG 6 cut(s) 452, 489, 703, 727, 745, 803
HphI GGTGA 5 cut(s) 177, 298, 317, 530, 661
Hpy166II GTNNAC 4 cut(s) 289, 438, 538, 669
Hpy188I TCNGA 2 cut(s) 408, 433
Hpy188III TCNNGA 5 cut(s) 248, 558, 565, 603, 727
Hpy8I GTNNAC 4 cut(s) 289, 438, 538, 669
Hpy99I CGWCG 6 cut(s) 32, 92, 254, 366, 553, 770
HpyAV CCTTC 2 cut(s) 339, 460
HpyCH4III ACNGT 2 cut(s) 254, 442
HpyCH4IV ACGT 4 cut(s) 196, 270, 361, 768
HpySE526I ACGT 4 cut(s) 196, 270, 361, 768
HspAI GCGC 1 cut(s) 750
KflI GGGWCCC 1 cut(s) 567
Kpn2I TCCGGA 1 cut(s) 726
KspI CCGCGG 2 cut(s) 227, 519
Kzo9I GATC 3 cut(s) 49, 348, 614
LguI GCTCTTC 2 cut(s) 326, 784
LmnI GCTCC 1 cut(s) 469
Lsp1109I GCAGC 5 cut(s) 69, 174, 367, 536, 600
LweI GCATC 1 cut(s) 674
MaeI CTAG 1 cut(s) 212
MaeII ACGT 4 cut(s) 196, 270, 361, 768
MaeIII GTNAC 1 cut(s) 608
MalI GATC 3 cut(s) 51, 350, 616
MbiI CCGCTC 2 cut(s) 129, 509
MboI GATC 3 cut(s) 49, 348, 614
MboII GAAGA 2 cut(s) 343, 771
MflI RGATCY 1 cut(s) 614
MhlI GDGCHC 3 cut(s) 219, 579, 779
MluCI AATT 3 cut(s) 138, 144, 308
MlyI GAGTC 2 cut(s) 443, 555
MmeI TCCRAC 2 cut(s) 320, 386
MnlI CCTC 8 cut(s) 5, 168, 171, 495, 594, 599, 734, 810
MroI TCCGGA 1 cut(s) 726
MseI TTAA 2 cut(s) 98, 835
MspA1I CMGCKG 3 cut(s) 226, 518, 789
MspI CCGG 6 cut(s) 452, 489, 703, 727, 745, 803
MspR9I CCNGG 5 cut(s) 452, 453, 489, 746, 819
MvaI CCWGG 1 cut(s) 819
MvnI CGCG 6 cut(s) 47, 92, 226, 499, 518, 765
NciI CCSGG 4 cut(s) 452, 453, 489, 746
NdeII GATC 3 cut(s) 49, 348, 614
NlaIV GGNNCC 7 cut(s) 209, 217, 218, 568, 569, 616, 794
NmeAIII GCCGAG 1 cut(s) 832
PaeR7I CTCGAG 1 cut(s) 528
PciSI GCTCTTC 2 cut(s) 326, 784
PcsI WCGNNNNNNNCGW 1 cut(s) 570
PfeI GAWTC 4 cut(s) 19, 40, 116, 409
PflMI CCANNNNNTGG 2 cut(s) 302, 789
PleI GAGTC 2 cut(s) 442, 555
PmaCI CACGTG 1 cut(s) 197
PmlI CACGTG 1 cut(s) 197
PpsI GAGTC 2 cut(s) 442, 555
Ppu21I YACGTR 1 cut(s) 197
PpuMI RGGWCCY 1 cut(s) 567
Psp5II RGGWCCY 1 cut(s) 567
Psp6I CCWGG 1 cut(s) 817
PspCI CACGTG 1 cut(s) 197
PspFI CCCAGC 2 cut(s) 262, 578
PspGI CCWGG 1 cut(s) 817
PspN4I GGNNCC 7 cut(s) 209, 217, 218, 568, 569, 616, 794
PspOMI GGGCCC 1 cut(s) 215
PspPI GGNCC 8 cut(s) 155, 208, 215, 216, 567, 721, 739, 792
PspPPI RGGWCCY 1 cut(s) 567
PspXI VCTCGAGB 1 cut(s) 528
PstNI CAGNNNCTG 1 cut(s) 789
PsuI RGATCY 1 cut(s) 614
RsaI GTAC 2 cut(s) 424, 698
RsaNI GTAC 2 cut(s) 423, 697
SacII CCGCGG 2 cut(s) 227, 519
SalI GTCGAC 1 cut(s) 436
SapI GCTCTTC 2 cut(s) 326, 784
SaqAI TTAA 2 cut(s) 98, 835
Sau3AI GATC 3 cut(s) 49, 348, 614
Sau96I GGNCC 8 cut(s) 155, 208, 215, 216, 567, 721, 739, 792
SchI GAGTC 2 cut(s) 443, 555
ScrFI CCNGG 5 cut(s) 452, 453, 489, 746, 819
SduI GDGCHC 3 cut(s) 219, 579, 779
SfaNI GCATC 1 cut(s) 674
Sfr274I CTCGAG 1 cut(s) 528
Sfr303I CCGCGG 2 cut(s) 227, 519
SgrBI CCGCGG 2 cut(s) 227, 519
SinI GGWCC 3 cut(s) 567, 721, 792
SlaI CTCGAG 1 cut(s) 528
SmaI CCCGGG 1 cut(s) 453
SmlI CTYRAG 1 cut(s) 528
SmoI CTYRAG 1 cut(s) 528
Sse9I AATT 3 cut(s) 138, 144, 308
SspMI CTAG 1 cut(s) 212
StyD4I CCNGG 5 cut(s) 450, 451, 487, 744, 817
StyI CCWWGG 2 cut(s) 211, 672
TaaI ACNGT 2 cut(s) 254, 442
TaiI ACGT 4 cut(s) 199, 273, 364, 771
TaqI TCGA 4 cut(s) 22, 343, 437, 529
TaqII GACCGA 1 cut(s) 709
TasI AATT 3 cut(s) 138, 144, 308
TauI GCSGC 8 cut(s) 129, 156, 393, 495, 502, 518, 744, 789
TfiI GAWTC 4 cut(s) 19, 40, 116, 409
Tru1I TTAA 2 cut(s) 98, 835
Tru9I TTAA 2 cut(s) 98, 835
TseI GCWGC 5 cut(s) 57, 162, 380, 524, 588
TspDTI ATGAA 1 cut(s) 384
TspGWI ACGGA 2 cut(s) 410, 627
TspMI CCCGGG 1 cut(s) 451
Van91I CCANNNNNTGG 2 cut(s) 302, 789
VpaK11BI GGWCC 3 cut(s) 567, 721, 792
XapI RAATTY 1 cut(s) 308
XhoI CTCGAG 1 cut(s) 528
XmaI CCCGGG 1 cut(s) 451
XmaJI CCTAGG 1 cut(s) 211
XmiI GTMKAC 1 cut(s) 437
XspI CTAG 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.