Rroxscaffold_33G00439720

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000033
OG0000098
Physical Location & Seq
Forward (+)
34214 .. 35825
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_33G00439720.1

Sequence Viewer

Length: 576 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGATCTGCACCGACGGCCGCTCCGCCGGGCTCACGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

191

Amino Acids

20.12

Weight (kDa)

11.17

Isoelectric Point (pI)

80.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 542
Acc36I ACCTGC 1 cut(s) 542
AccBSI CCGCTC 2 cut(s) 303, 417
AccI GTMKAC 1 cut(s) 230
AccII CGCG 4 cut(s) 293, 312, 457, 512
AclWI GGATC 2 cut(s) 34, 137
AcoI YGGCCR 3 cut(s) 283, 412, 495
AfaI GTAC 1 cut(s) 217
AfiI CCNNNNNNNGG 5 cut(s) 164, 189, 292, 497, 533
AflII CTTAAG 1 cut(s) 515
AgsI TTSAA 1 cut(s) 239
AjnI CCWGG 2 cut(s) 435, 477
AjuI GAANNNNNNNTTGG 2 cut(s) 134, 166
AluBI AGCT 1 cut(s) 321
AluI AGCT 1 cut(s) 321
AlwI GGATC 2 cut(s) 34, 137
Ama87I CYCGRG 4 cut(s) 244, 322, 378, 395
AoxI GGCC 4 cut(s) 283, 412, 475, 495
ApeKI GCWGC 3 cut(s) 58, 318, 445
AspLEI GCGC 3 cut(s) 459, 514, 522
AspS9I GGNCC 3 cut(s) 155, 360, 475
AsuC2I CCSGG 4 cut(s) 245, 246, 282, 424
AsuHPI GGTGA 2 cut(s) 324, 566
AvaI CYCGRG 4 cut(s) 244, 322, 378, 395
AvaII GGWCC 2 cut(s) 155, 360
BaeGI GKGCMC 2 cut(s) 177, 372
BanII GRGCYC 1 cut(s) 429
BbsI GAAGAC 1 cut(s) 112
BbvI GCAGC 3 cut(s) 45, 330, 457
BccI CCATC 1 cut(s) 531
BceAI ACGGC 2 cut(s) 427, 510
BciT130I CCWGG 2 cut(s) 437, 479
BcnI CCSGG 4 cut(s) 245, 246, 282, 424
BfaI CTAG 1 cut(s) 539
BfoI RGCGCY 1 cut(s) 523
BfrI CTTAAG 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 542
BglI GCCNNNNNGGC 1 cut(s) 494
BglII AGATCT 1 cut(s) 399
BisI GCNGC 8 cut(s) 59, 89, 294, 310, 319, 415, 446, 455
BlsI GCNGC 8 cut(s) 60, 90, 295, 311, 320, 416, 447, 456
Bme1390I CCNGG 6 cut(s) 245, 246, 282, 424, 437, 479
Bme18I GGWCC 2 cut(s) 155, 360
BmeT110I CYCGRG 4 cut(s) 244, 322, 378, 395
BmgT120I GGNCC 3 cut(s) 155, 360, 475
BmiI GGNNCC 4 cut(s) 156, 361, 362, 476
BmrFI CCNGG 6 cut(s) 245, 246, 282, 424, 437, 479
BmrI ACTGGG 2 cut(s) 265, 366
BmuI ACTGGG 2 cut(s) 265, 366
BpiI GAAGAC 1 cut(s) 112
BpuMI CCSGG 4 cut(s) 245, 246, 282, 424
BsaJI CCNNGG 4 cut(s) 244, 280, 310, 435
BsaXI ACNNNNNCTCC 2 cut(s) 401, 431
Bsc4I CCNNNNNNNGG 5 cut(s) 164, 189, 292, 497, 533
Bse118I RCCGGY 2 cut(s) 285, 497
Bse1I ACTGG 4 cut(s) 69, 219, 271, 361
BseBI CCWGG 2 cut(s) 437, 479
BseDI CCNNGG 4 cut(s) 244, 280, 310, 435
BseGI GGATG 1 cut(s) 523
BseLI CCNNNNNNNGG 5 cut(s) 164, 189, 292, 497, 533
BseMII CTCAG 1 cut(s) 216
BseNI ACTGG 4 cut(s) 69, 219, 271, 361
BseSI GKGCMC 2 cut(s) 177, 372
BseX3I CGGCCG 3 cut(s) 283, 412, 495
BseXI GCAGC 3 cut(s) 45, 330, 457
BseYI CCCAGC 2 cut(s) 93, 371
BsgI GTGCAG 1 cut(s) 388
Bsh1236I CGCG 4 cut(s) 293, 312, 457, 512
Bsh1285I CGRYCG 4 cut(s) 286, 415, 452, 498
BshFI GGCC 4 cut(s) 285, 414, 477, 497
BsiEI CGRYCG 4 cut(s) 286, 415, 452, 498
BsiHKCI CYCGRG 4 cut(s) 244, 322, 378, 395
BsiSI CCGG 6 cut(s) 127, 245, 282, 286, 423, 498
BslFI GGGAC 3 cut(s) 263, 367, 373
BslI CCNNNNNNNGG 5 cut(s) 164, 189, 292, 497, 533
BsmFI GGGAC 3 cut(s) 263, 367, 373
BsnI GGCC 4 cut(s) 285, 414, 477, 497
BsoBI CYCGRG 4 cut(s) 244, 322, 378, 395
Bsp1286I GDGCHC 3 cut(s) 177, 372, 429
Bsp143I GATC 3 cut(s) 26, 129, 399
BspANI GGCC 4 cut(s) 285, 414, 477, 497
BspCNI CTCAG 1 cut(s) 217
BspFNI CGCG 4 cut(s) 293, 312, 457, 512
BspLI GGNNCC 4 cut(s) 156, 361, 362, 476
BspMI ACCTGC 1 cut(s) 542
BspPI GGATC 2 cut(s) 34, 137
BspQI GCTCTTC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 515
BsrBI CCGCTC 2 cut(s) 303, 417
BsrFI RCCGGY 2 cut(s) 285, 497
BsrI ACTGG 4 cut(s) 69, 219, 271, 361
BssAI RCCGGY 2 cut(s) 285, 497
BssECI CCNNGG 4 cut(s) 244, 280, 310, 435
BssMI GATC 3 cut(s) 26, 129, 399
Bst2UI CCWGG 2 cut(s) 437, 479
Bst4CI ACNGT 1 cut(s) 235
Bst6I CTCTTC 1 cut(s) 4
BstAFI CTTAAG 1 cut(s) 515
BstC8I GCNNGC 5 cut(s) 137, 147, 177, 287, 291
BstDEI CTNAG 2 cut(s) 225, 573
BstDSI CCRYGG 1 cut(s) 310
BstF5I GGATG 1 cut(s) 523
BstFNI CGCG 4 cut(s) 293, 312, 457, 512
BstH2I RGCGCY 1 cut(s) 523
BstHHI GCGC 3 cut(s) 459, 514, 522
BstKTI GATC 3 cut(s) 29, 132, 402
BstMBI GATC 3 cut(s) 26, 129, 399
BstMCI CGRYCG 4 cut(s) 286, 415, 452, 498
BstNI CCWGG 2 cut(s) 437, 479
BstSCI CCNGG 6 cut(s) 243, 244, 280, 422, 435, 477
BstSLI GKGCMC 2 cut(s) 177, 372
BstUI CGCG 4 cut(s) 293, 312, 457, 512
BstV1I GCAGC 3 cut(s) 45, 330, 457
BstV2I GAAGAC 1 cut(s) 112
BstX2I RGATCY 1 cut(s) 399
BstYI RGATCY 1 cut(s) 399
BstZI CGGCCG 3 cut(s) 283, 412, 495
BsuRI GGCC 4 cut(s) 285, 414, 477, 497
BtgI CCRYGG 1 cut(s) 310
BtsCI GGATG 1 cut(s) 523
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 1 cut(s) 177
BveI ACCTGC 1 cut(s) 542
Cac8I GCNNGC 5 cut(s) 137, 147, 177, 287, 291
CfoI GCGC 3 cut(s) 459, 514, 522
Cfr10I RCCGGY 2 cut(s) 285, 497
Cfr13I GGNCC 3 cut(s) 155, 360, 475
Cfr42I CCGCGG 1 cut(s) 313
Cfr9I CCCGGG 1 cut(s) 244
Csp6I GTAC 1 cut(s) 216
CviQI GTAC 1 cut(s) 216
DdeI CTNAG 2 cut(s) 225, 573
DpnI GATC 3 cut(s) 28, 131, 401
DpnII GATC 3 cut(s) 26, 129, 399
EaeI YGGCCR 3 cut(s) 283, 412, 495
EagI CGGCCG 3 cut(s) 283, 412, 495
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 2 cut(s) 113, 409
EclXI CGGCCG 3 cut(s) 283, 412, 495
Eco24I GRGCYC 1 cut(s) 429
Eco47I GGWCC 2 cut(s) 155, 360
Eco52I CGGCCG 3 cut(s) 283, 412, 495
Eco88I CYCGRG 4 cut(s) 244, 322, 378, 395
EcoO109I RGGNCCY 2 cut(s) 360, 475
EcoRII CCWGG 2 cut(s) 435, 477
EcoT38I GRGCYC 1 cut(s) 429
FaiI YATR 2 cut(s) 47, 503
FaqI GGGAC 3 cut(s) 263, 367, 373
FauI CCCGC 3 cut(s) 144, 184, 308
FblI GTMKAC 1 cut(s) 230
Fnu4HI GCNGC 8 cut(s) 59, 89, 294, 310, 319, 415, 446, 455
FokI GGATG 1 cut(s) 510
FriOI GRGCYC 1 cut(s) 429
Fsp4HI GCNGC 8 cut(s) 59, 89, 294, 310, 319, 415, 446, 455
FspBI CTAG 1 cut(s) 539
GlaI GCGC 3 cut(s) 458, 513, 521
GluI GCNGC 8 cut(s) 59, 89, 294, 310, 319, 415, 446, 455
GsaI CCCAGC 2 cut(s) 97, 375
HaeII RGCGCY 1 cut(s) 523
HaeIII GGCC 4 cut(s) 285, 414, 477, 497
HapII CCGG 6 cut(s) 127, 245, 282, 286, 423, 498
HhaI GCGC 3 cut(s) 459, 514, 522
Hin6I GCGC 3 cut(s) 457, 512, 520
HinP1I GCGC 3 cut(s) 457, 512, 520
HincII GTYRAC 1 cut(s) 231
HindII GTYRAC 1 cut(s) 231
HinfI GANTC 4 cut(s) 185, 202, 227, 545
HpaII CCGG 6 cut(s) 127, 245, 282, 286, 423, 498
HphI GGTGA 2 cut(s) 324, 566
Hpy166II GTNNAC 2 cut(s) 231, 332
Hpy188I TCNGA 3 cut(s) 184, 201, 226
Hpy188III TCNNGA 2 cut(s) 352, 395
Hpy8I GTNNAC 2 cut(s) 231, 332
Hpy99I CGWCG 4 cut(s) 44, 347, 413, 496
HpyAV CCTTC 2 cut(s) 17, 253
HpyCH4III ACNGT 1 cut(s) 235
HpyCH4IV ACGT 1 cut(s) 39
HpyCH4V TGCA 2 cut(s) 405, 445
HpyF3I CTNAG 2 cut(s) 225, 573
HpySE526I ACGT 1 cut(s) 39
HspAI GCGC 3 cut(s) 457, 512, 520
KflI GGGWCCC 1 cut(s) 360
KroI GCCGGC 1 cut(s) 285
KroNI GCCGGC 1 cut(s) 287
KspI CCGCGG 1 cut(s) 313
Kzo9I GATC 3 cut(s) 26, 129, 399
LguI GCTCTTC 1 cut(s) 4
LmnI GCTCC 2 cut(s) 262, 422
Lsp1109I GCAGC 3 cut(s) 45, 330, 457
MaeI CTAG 1 cut(s) 539
MaeII ACGT 1 cut(s) 39
MaeIII GTNAC 2 cut(s) 506, 561
MalI GATC 3 cut(s) 28, 131, 401
MbiI CCGCTC 2 cut(s) 303, 417
MboI GATC 3 cut(s) 26, 129, 399
MboII GAAGA 2 cut(s) 21, 112
MflI RGATCY 1 cut(s) 399
MhlI GDGCHC 3 cut(s) 177, 372, 429
MlyI GAGTC 1 cut(s) 236
MnlI CCTC 4 cut(s) 158, 190, 387, 471
MroNI GCCGGC 1 cut(s) 285
MseI TTAA 1 cut(s) 516
MspA1I CMGCKG 1 cut(s) 312
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 6 cut(s) 127, 245, 282, 286, 423, 498
MspR9I CCNGG 6 cut(s) 245, 246, 282, 424, 437, 479
MvaI CCWGG 2 cut(s) 437, 479
MvnI CGCG 4 cut(s) 293, 312, 457, 512
NaeI GCCGGC 1 cut(s) 287
NciI CCSGG 4 cut(s) 245, 246, 282, 424
NdeII GATC 3 cut(s) 26, 129, 399
NgoMIV GCCGGC 1 cut(s) 285
NlaIV GGNNCC 4 cut(s) 156, 361, 362, 476
NmuCI GTSAC 1 cut(s) 506
PaeR7I CTCGAG 2 cut(s) 322, 378
PaqCI CACCTGC 1 cut(s) 542
PciSI GCTCTTC 1 cut(s) 4
PdiI GCCGGC 1 cut(s) 287
PfeI GAWTC 3 cut(s) 185, 202, 545
PflFI GACNNNGTC 1 cut(s) 116
PkrI GCNGC 8 cut(s) 60, 90, 295, 311, 320, 416, 447, 456
PleI GAGTC 1 cut(s) 235
PpsI GAGTC 1 cut(s) 235
PpuMI RGGWCCY 1 cut(s) 360
Psp5II RGGWCCY 1 cut(s) 360
Psp6I CCWGG 2 cut(s) 435, 477
PspFI CCCAGC 2 cut(s) 93, 371
PspGI CCWGG 2 cut(s) 435, 477
PspN4I GGNNCC 4 cut(s) 156, 361, 362, 476
PspPI GGNCC 3 cut(s) 155, 360, 475
PspPPI RGGWCCY 1 cut(s) 360
PspXI VCTCGAGB 2 cut(s) 322, 378
PsuI RGATCY 1 cut(s) 399
PsyI GACNNNGTC 1 cut(s) 116
RsaI GTAC 1 cut(s) 217
RsaNI GTAC 1 cut(s) 216
SacII CCGCGG 1 cut(s) 313
SalI GTCGAC 1 cut(s) 229
SapI GCTCTTC 1 cut(s) 4
SaqAI TTAA 1 cut(s) 516
SatI GCNGC 8 cut(s) 59, 89, 294, 310, 319, 415, 446, 455
Sau3AI GATC 3 cut(s) 26, 129, 399
Sau96I GGNCC 3 cut(s) 155, 360, 475
SchI GAGTC 1 cut(s) 236
ScrFI CCNGG 6 cut(s) 245, 246, 282, 424, 437, 479
SduI GDGCHC 3 cut(s) 177, 372, 429
SetI ASST 6 cut(s) 42, 112, 323, 441, 508, 556
Sfr274I CTCGAG 2 cut(s) 322, 378
Sfr303I CCGCGG 1 cut(s) 313
SgrBI CCGCGG 1 cut(s) 313
SinI GGWCC 2 cut(s) 155, 360
SlaI CTCGAG 2 cut(s) 322, 378
SmaI CCCGGG 1 cut(s) 246
SmlI CTYRAG 3 cut(s) 322, 378, 515
SmoI CTYRAG 3 cut(s) 322, 378, 515
SspMI CTAG 1 cut(s) 539
StyD4I CCNGG 6 cut(s) 243, 244, 280, 422, 435, 477
TaaI ACNGT 1 cut(s) 235
TaiI ACGT 1 cut(s) 42
TaqI TCGA 4 cut(s) 21, 230, 323, 379
TauI GCSGC 5 cut(s) 91, 296, 312, 417, 457
TfiI GAWTC 3 cut(s) 185, 202, 545
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TscAI CASTG 1 cut(s) 177
TseFI GTSAC 1 cut(s) 506
TseI GCWGC 3 cut(s) 58, 318, 445
Tsp45I GTSAC 1 cut(s) 506
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 3 cut(s) 203, 205, 265
TspMI CCCGGG 1 cut(s) 244
TspRI CASTG 1 cut(s) 177
Tth111I GACNNNGTC 1 cut(s) 116
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 2 cut(s) 155, 360
XhoI CTCGAG 2 cut(s) 322, 378
XmaI CCCGGG 1 cut(s) 244
XmiI GTMKAC 1 cut(s) 230
XspI CTAG 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.