Rroxscaffold_72G00449410

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000072
OG0000098
Physical Location & Seq
Reverse (-)
17709 .. 18879
1171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_72G00449410.1

Sequence Viewer

Length: 969 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGAAAGCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

322

Amino Acids

35.43

Weight (kDa)

10.69

Isoelectric Point (pI)

56.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 255
Acc36I ACCTGC 1 cut(s) 255
AccB7I CCANNNNNTGG 1 cut(s) 949
AccBSI CCGCTC 1 cut(s) 670
AccI GTMKAC 2 cut(s) 553, 596
AccII CGCG 3 cut(s) 660, 679, 925
AccIII TCCGGA 1 cut(s) 885
AclI AACGTT 1 cut(s) 392
AclWI GGATC 5 cut(s) 34, 139, 321, 768, 781
AcoI YGGCCR 1 cut(s) 650
AcsI RAATTY 1 cut(s) 113
AfaI GTAC 3 cut(s) 166, 583, 856
AfiI CCNNNNNNNGG 6 cut(s) 348, 374, 652, 659, 949, 962
AgsI TTSAA 2 cut(s) 605, 895
AjiI CACGTC 1 cut(s) 929
AjuI GAANNNNNNNTTGG 2 cut(s) 318, 350
AluBI AGCT 5 cut(s) 108, 189, 232, 483, 688
AluI AGCT 5 cut(s) 108, 189, 232, 483, 688
Alw21I GWGCWC 2 cut(s) 234, 939
Alw26I GTCTC 1 cut(s) 829
AlwI GGATC 5 cut(s) 34, 139, 321, 768, 781
AlwNI CAGNNNCTG 2 cut(s) 822, 949
Ama87I CYCGRG 4 cut(s) 610, 689, 745, 762
Aor13HI TCCGGA 1 cut(s) 885
AoxI GGCC 3 cut(s) 139, 650, 898
ApeKI GCWGC 2 cut(s) 58, 685
ApoI RAATTY 1 cut(s) 113
AspLEI GCGC 1 cut(s) 911
AspS9I GGNCC 5 cut(s) 339, 727, 880, 898, 952
AsuC2I CCSGG 6 cut(s) 311, 611, 612, 649, 862, 905
AsuHPI GGTGA 2 cut(s) 691, 819
AvaI CYCGRG 4 cut(s) 610, 689, 745, 762
AvaII GGWCC 4 cut(s) 339, 727, 880, 952
BaeGI GKGCMC 2 cut(s) 361, 739
BamHI GGATCC 1 cut(s) 773
BanII GRGCYC 1 cut(s) 234
BauI CACGAG 1 cut(s) 209
BbsI GAAGAC 2 cut(s) 295, 486
Bbv12I GWGCWC 2 cut(s) 234, 939
BbvI GCAGC 2 cut(s) 45, 697
BcnI CCSGG 6 cut(s) 311, 611, 612, 649, 862, 905
BcoDI GTCTC 1 cut(s) 829
BfaI CTAG 2 cut(s) 105, 473
BfuAI ACCTGC 1 cut(s) 255
BglI GCCNNNNNGGC 1 cut(s) 906
BisI GCNGC 7 cut(s) 59, 272, 661, 677, 686, 901, 947
BlsI GCNGC 7 cut(s) 60, 273, 662, 678, 687, 902, 948
Bme1390I CCNGG 6 cut(s) 311, 611, 612, 649, 862, 905
Bme18I GGWCC 4 cut(s) 339, 727, 880, 952
BmeT110I CYCGRG 4 cut(s) 610, 689, 745, 762
BmgBI CACGTC 1 cut(s) 929
BmgT120I GGNCC 5 cut(s) 339, 727, 880, 898, 952
BmiI GGNNCC 6 cut(s) 340, 429, 728, 729, 775, 954
BmrFI CCNGG 6 cut(s) 311, 611, 612, 649, 862, 905
BmrI ACTGGG 2 cut(s) 630, 733
BmsI GCATC 1 cut(s) 832
BmuI ACTGGG 2 cut(s) 630, 733
BoxI GACNNNNGTC 1 cut(s) 475
BpiI GAAGAC 2 cut(s) 295, 486
BplI GAGNNNNNCTC 2 cut(s) 467, 499
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 6 cut(s) 311, 611, 612, 649, 862, 905
Bsa29I ATCGAT 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 829
BsaJI CCNNGG 7 cut(s) 528, 610, 647, 677, 763, 830, 904
BsaWI WCCGGW 2 cut(s) 885, 913
BsaXI ACNNNNNCTCC 1 cut(s) 944
Bsc4I CCNNNNNNNGG 6 cut(s) 348, 374, 652, 659, 949, 962
Bse118I RCCGGY 1 cut(s) 652
Bse1I ACTGG 5 cut(s) 69, 172, 585, 636, 728
BseAI TCCGGA 1 cut(s) 885
BseCI ATCGAT 1 cut(s) 134
BseDI CCNNGG 7 cut(s) 528, 610, 647, 677, 763, 830, 904
BseLI CCNNNNNNNGG 6 cut(s) 348, 374, 652, 659, 949, 962
BseMII CTCAG 1 cut(s) 582
BseNI ACTGG 5 cut(s) 69, 172, 585, 636, 728
BseSI GKGCMC 2 cut(s) 361, 739
BseX3I CGGCCG 1 cut(s) 650
BseXI GCAGC 2 cut(s) 45, 697
BseYI CCCAGC 2 cut(s) 276, 738
Bsh1236I CGCG 3 cut(s) 660, 679, 925
Bsh1285I CGRYCG 2 cut(s) 653, 861
BshFI GGCC 3 cut(s) 141, 652, 900
BshVI ATCGAT 1 cut(s) 134
BsiEI CGRYCG 2 cut(s) 653, 861
BsiHKAI GWGCWC 2 cut(s) 234, 939
BsiHKCI CYCGRG 4 cut(s) 610, 689, 745, 762
BsiSI CCGG 9 cut(s) 311, 611, 649, 653, 861, 886, 904, 914, 963
BslFI GGGAC 4 cut(s) 573, 628, 734, 740
BslI CCNNNNNNNGG 6 cut(s) 348, 374, 652, 659, 949, 962
BsmAI GTCTC 1 cut(s) 829
BsmFI GGGAC 4 cut(s) 573, 628, 734, 740
BsnI GGCC 3 cut(s) 141, 652, 900
Bso31I GGTCTC 1 cut(s) 829
BsoBI CYCGRG 4 cut(s) 610, 689, 745, 762
Bsp1286I GDGCHC 4 cut(s) 234, 361, 739, 939
Bsp13I TCCGGA 1 cut(s) 885
Bsp143I GATC 4 cut(s) 26, 131, 313, 773
BspANI GGCC 3 cut(s) 141, 652, 900
BspCNI CTCAG 1 cut(s) 583
BspDI ATCGAT 1 cut(s) 134
BspEI TCCGGA 1 cut(s) 885
BspFNI CGCG 3 cut(s) 660, 679, 925
BspLI GGNNCC 6 cut(s) 340, 429, 728, 729, 775, 954
BspMI ACCTGC 1 cut(s) 255
BspPI GGATC 5 cut(s) 34, 139, 321, 768, 781
BspQI GCTCTTC 2 cut(s) 4, 944
BspTNI GGTCTC 1 cut(s) 829
BsrBI CCGCTC 1 cut(s) 670
BsrFI RCCGGY 1 cut(s) 652
BsrI ACTGG 5 cut(s) 69, 172, 585, 636, 728
BssAI RCCGGY 1 cut(s) 652
BssECI CCNNGG 7 cut(s) 528, 610, 647, 677, 763, 830, 904
BssMI GATC 4 cut(s) 26, 131, 313, 773
BssSI CACGAG 1 cut(s) 209
BssT1I CCWWGG 2 cut(s) 528, 830
Bst2BI CACGAG 1 cut(s) 209
Bst4CI ACNGT 2 cut(s) 154, 601
Bst6I CTCTTC 2 cut(s) 4, 944
BstC8I GCNNGC 4 cut(s) 321, 331, 654, 658
BstDEI CTNAG 2 cut(s) 238, 591
BstDSI CCRYGG 1 cut(s) 677
BstFNI CGCG 3 cut(s) 660, 679, 925
BstHHI GCGC 1 cut(s) 911
BstKTI GATC 4 cut(s) 29, 134, 316, 776
BstMAI GTCTC 1 cut(s) 829
BstMBI GATC 4 cut(s) 26, 131, 313, 773
BstMCI CGRYCG 2 cut(s) 653, 861
BstPAI GACNNNNGTC 1 cut(s) 475
BstSCI CCNGG 6 cut(s) 309, 609, 610, 647, 860, 903
BstSLI GKGCMC 2 cut(s) 361, 739
BstUI CGCG 3 cut(s) 660, 679, 925
BstV1I GCAGC 2 cut(s) 45, 697
BstV2I GAAGAC 2 cut(s) 295, 486
BstX2I RGATCY 1 cut(s) 773
BstYI RGATCY 1 cut(s) 773
BstZI CGGCCG 1 cut(s) 650
Bsu15I ATCGAT 1 cut(s) 134
BsuRI GGCC 3 cut(s) 141, 652, 900
BsuTUI ATCGAT 1 cut(s) 134
BtgI CCRYGG 1 cut(s) 677
BtrI CACGTC 1 cut(s) 929
BtsI GCAGTG 1 cut(s) 361
BtsIMutI CAGTG 1 cut(s) 361
BveI ACCTGC 1 cut(s) 255
Cac8I GCNNGC 4 cut(s) 321, 331, 654, 658
CaiI CAGNNNCTG 2 cut(s) 822, 949
CfoI GCGC 1 cut(s) 911
Cfr10I RCCGGY 1 cut(s) 652
Cfr13I GGNCC 5 cut(s) 339, 727, 880, 898, 952
Cfr42I CCGCGG 1 cut(s) 680
Cfr9I CCCGGG 1 cut(s) 610
ClaI ATCGAT 1 cut(s) 134
Csp6I GTAC 3 cut(s) 165, 582, 855
CviQI GTAC 3 cut(s) 165, 582, 855
DdeI CTNAG 2 cut(s) 238, 591
DpnI GATC 4 cut(s) 28, 133, 315, 775
DpnII GATC 4 cut(s) 26, 131, 313, 773
DraI TTTAAA 1 cut(s) 112
EaeI YGGCCR 1 cut(s) 650
EagI CGGCCG 1 cut(s) 650
Eam1104I CTCTTC 2 cut(s) 4, 944
EarI CTCTTC 2 cut(s) 4, 944
EciI GGCGGA 1 cut(s) 296
Ecl136II GAGCTC 1 cut(s) 232
EclXI CGGCCG 1 cut(s) 650
Eco130I CCWWGG 2 cut(s) 528, 830
Eco24I GRGCYC 1 cut(s) 234
Eco31I GGTCTC 1 cut(s) 829
Eco47I GGWCC 4 cut(s) 339, 727, 880, 952
Eco52I CGGCCG 1 cut(s) 650
Eco53kI GAGCTC 1 cut(s) 232
Eco88I CYCGRG 4 cut(s) 610, 689, 745, 762
EcoICRI GAGCTC 1 cut(s) 232
EcoO109I RGGNCCY 1 cut(s) 727
EcoT14I CCWWGG 2 cut(s) 528, 830
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 2 cut(s) 528, 830
FaiI YATR 3 cut(s) 47, 438, 851
FaqI GGGAC 4 cut(s) 573, 628, 734, 740
FauI CCCGC 4 cut(s) 328, 369, 511, 675
FblI GTMKAC 2 cut(s) 553, 596
Fnu4HI GCNGC 7 cut(s) 59, 272, 661, 677, 686, 901, 947
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 7 cut(s) 59, 272, 661, 677, 686, 901, 947
FspBI CTAG 2 cut(s) 105, 473
GlaI GCGC 1 cut(s) 910
GluI GCNGC 7 cut(s) 59, 272, 661, 677, 686, 901, 947
GsaI CCCAGC 2 cut(s) 280, 742
HaeIII GGCC 3 cut(s) 141, 652, 900
HapII CCGG 9 cut(s) 311, 611, 649, 653, 861, 886, 904, 914, 963
HhaI GCGC 1 cut(s) 911
Hin6I GCGC 1 cut(s) 909
HinP1I GCGC 1 cut(s) 909
HincII GTYRAC 1 cut(s) 597
HindII GTYRAC 1 cut(s) 597
HinfI GANTC 6 cut(s) 178, 370, 476, 509, 568, 593
HpaII CCGG 9 cut(s) 311, 611, 649, 653, 861, 886, 904, 914, 963
HphI GGTGA 2 cut(s) 691, 819
Hpy166II GTNNAC 4 cut(s) 554, 597, 699, 827
Hpy188I TCNGA 6 cut(s) 97, 177, 369, 470, 567, 592
Hpy188III TCNNGA 3 cut(s) 719, 762, 886
Hpy8I GTNNAC 4 cut(s) 554, 597, 699, 827
Hpy99I CGWCG 3 cut(s) 44, 714, 930
HpyAV CCTTC 3 cut(s) 17, 418, 618
HpyCH4III ACNGT 2 cut(s) 154, 601
HpyCH4IV ACGT 3 cut(s) 39, 392, 928
HpyF3I CTNAG 2 cut(s) 238, 591
HpySE526I ACGT 3 cut(s) 39, 392, 928
HspAI GCGC 1 cut(s) 909
KflI GGGWCCC 1 cut(s) 727
Kpn2I TCCGGA 1 cut(s) 885
KroI GCCGGC 1 cut(s) 652
KroNI GCCGGC 1 cut(s) 654
KspI CCGCGG 1 cut(s) 680
Kzo9I GATC 4 cut(s) 26, 131, 313, 773
LguI GCTCTTC 2 cut(s) 4, 944
LmnI GCTCC 2 cut(s) 433, 627
Lsp1109I GCAGC 2 cut(s) 45, 697
LweI GCATC 1 cut(s) 832
MaeI CTAG 2 cut(s) 105, 473
MaeII ACGT 3 cut(s) 39, 392, 928
MaeIII GTNAC 2 cut(s) 83, 767
MalI GATC 4 cut(s) 28, 133, 315, 775
MbiI CCGCTC 1 cut(s) 670
MboI GATC 4 cut(s) 26, 131, 313, 773
MboII GAAGA 4 cut(s) 21, 295, 486, 931
MflI RGATCY 1 cut(s) 773
MhlI GDGCHC 4 cut(s) 234, 361, 739, 939
MluCI AATT 1 cut(s) 113
MlyI GAGTC 2 cut(s) 485, 602
MmeI TCCRAC 1 cut(s) 448
MnlI CCTC 8 cut(s) 112, 342, 375, 456, 754, 758, 812, 893
MroI TCCGGA 1 cut(s) 885
MroNI GCCGGC 1 cut(s) 652
MseI TTAA 3 cut(s) 111, 260, 395
MspA1I CMGCKG 3 cut(s) 506, 679, 949
MspI CCGG 9 cut(s) 311, 611, 649, 653, 861, 886, 904, 914, 963
MspR9I CCNGG 6 cut(s) 311, 611, 612, 649, 862, 905
MvnI CGCG 3 cut(s) 660, 679, 925
NaeI GCCGGC 1 cut(s) 654
NciI CCSGG 6 cut(s) 311, 611, 612, 649, 862, 905
NdeII GATC 4 cut(s) 26, 131, 313, 773
NgoMIV GCCGGC 1 cut(s) 652
NlaIV GGNNCC 6 cut(s) 340, 429, 728, 729, 775, 954
PaeR7I CTCGAG 2 cut(s) 689, 745
PaqCI CACCTGC 1 cut(s) 255
PciSI GCTCTTC 2 cut(s) 4, 944
PdiI GCCGGC 1 cut(s) 654
PfeI GAWTC 4 cut(s) 178, 370, 509, 568
PflFI GACNNNGTC 1 cut(s) 299
PflMI CCANNNNNTGG 1 cut(s) 949
PkrI GCNGC 7 cut(s) 60, 273, 662, 678, 687, 902, 948
PleI GAGTC 2 cut(s) 484, 601
PpsI GAGTC 2 cut(s) 484, 601
PpuMI RGGWCCY 1 cut(s) 727
PshAI GACNNNNGTC 1 cut(s) 475
Psp124BI GAGCTC 1 cut(s) 234
Psp1406I AACGTT 1 cut(s) 392
Psp5II RGGWCCY 1 cut(s) 727
PspFI CCCAGC 2 cut(s) 276, 738
PspN4I GGNNCC 6 cut(s) 340, 429, 728, 729, 775, 954
PspPI GGNCC 5 cut(s) 339, 727, 880, 898, 952
PspPPI RGGWCCY 1 cut(s) 727
PspXI VCTCGAGB 2 cut(s) 689, 745
PstNI CAGNNNCTG 2 cut(s) 822, 949
PsuI RGATCY 1 cut(s) 773
PsyI GACNNNGTC 1 cut(s) 299
RsaI GTAC 3 cut(s) 166, 583, 856
RsaNI GTAC 3 cut(s) 165, 582, 855
SacI GAGCTC 1 cut(s) 234
SacII CCGCGG 1 cut(s) 680
SalI GTCGAC 1 cut(s) 595
SapI GCTCTTC 2 cut(s) 4, 944
SaqAI TTAA 3 cut(s) 111, 260, 395
SatI GCNGC 7 cut(s) 59, 272, 661, 677, 686, 901, 947
Sau3AI GATC 4 cut(s) 26, 131, 313, 773
Sau96I GGNCC 5 cut(s) 339, 727, 880, 898, 952
SchI GAGTC 2 cut(s) 485, 602
ScrFI CCNGG 6 cut(s) 311, 611, 612, 649, 862, 905
SduI GDGCHC 4 cut(s) 234, 361, 739, 939
SfaNI GCATC 1 cut(s) 832
Sfr274I CTCGAG 2 cut(s) 689, 745
Sfr303I CCGCGG 1 cut(s) 680
SgrBI CCGCGG 1 cut(s) 680
SinI GGWCC 4 cut(s) 339, 727, 880, 952
SlaI CTCGAG 2 cut(s) 689, 745
SmaI CCCGGG 1 cut(s) 612
SmlI CTYRAG 3 cut(s) 449, 689, 745
SmoI CTYRAG 3 cut(s) 449, 689, 745
Sse9I AATT 1 cut(s) 113
SspMI CTAG 2 cut(s) 105, 473
SstI GAGCTC 1 cut(s) 234
StyD4I CCNGG 6 cut(s) 309, 609, 610, 647, 860, 903
StyI CCWWGG 2 cut(s) 528, 830
TaaI ACNGT 2 cut(s) 154, 601
TaiI ACGT 3 cut(s) 42, 395, 931
TaqI TCGA 5 cut(s) 21, 134, 596, 690, 746
TaqII GACCGA 1 cut(s) 868
TasI AATT 1 cut(s) 113
TauI GCSGC 5 cut(s) 274, 663, 679, 903, 949
TfiI GAWTC 4 cut(s) 178, 370, 509, 568
Tru1I TTAA 3 cut(s) 111, 260, 395
Tru9I TTAA 3 cut(s) 111, 260, 395
TscAI CASTG 1 cut(s) 361
TseI GCWGC 2 cut(s) 58, 685
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 390, 569, 630, 786
TspMI CCCGGG 1 cut(s) 610
TspRI CASTG 1 cut(s) 361
Tth111I GACNNNGTC 1 cut(s) 299
Van91I CCANNNNNTGG 1 cut(s) 949
VpaK11BI GGWCC 4 cut(s) 339, 727, 880, 952
XapI RAATTY 1 cut(s) 113
XhoI CTCGAG 2 cut(s) 689, 745
XmaI CCCGGG 1 cut(s) 610
XmiI GTMKAC 2 cut(s) 553, 596
XspI CTAG 2 cut(s) 105, 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.