Rroxscaffold_1G00000160

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000098
Physical Location & Seq
Forward (+)
144653 .. 145860
1208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00000160.1

Sequence Viewer

Length: 714 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCCGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGATGTGCCGCCCCAGCCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGAGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGCCGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

237

Amino Acids

25.48

Weight (kDa)

11.55

Isoelectric Point (pI)

72.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 654
AccBSI CCGCTC 1 cut(s) 375
AccI GTMKAC 1 cut(s) 302
AccII CGCG 3 cut(s) 365, 384, 630
AccIII TCCGGA 1 cut(s) 590
AclWI GGATC 5 cut(s) 34, 136, 207, 474, 487
AcsI RAATTY 1 cut(s) 110
AdeI CACNNNGTG 1 cut(s) 153
AfaI GTAC 2 cut(s) 289, 562
AfiI CCNNNNNNNGG 4 cut(s) 261, 364, 654, 682
AgsI TTSAA 2 cut(s) 311, 600
AjiI CACGTC 1 cut(s) 634
AjnI CCWGG 1 cut(s) 681
AjuI GAANNNNNNNTTGG 2 cut(s) 204, 236
AluBI AGCT 2 cut(s) 105, 393
AluI AGCT 2 cut(s) 105, 393
Alw21I GWGCWC 1 cut(s) 644
Alw26I GTCTC 1 cut(s) 535
AlwI GGATC 5 cut(s) 34, 136, 207, 474, 487
AlwNI CAGNNNCTG 2 cut(s) 528, 654
Ama87I CYCGRG 3 cut(s) 316, 394, 468
Aor13HI TCCGGA 1 cut(s) 590
AoxI GGCC 2 cut(s) 136, 603
ApeKI GCWGC 3 cut(s) 58, 390, 453
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 616
AspS9I GGNCC 5 cut(s) 225, 432, 585, 603, 657
AsuC2I CCSGG 4 cut(s) 197, 317, 318, 610
AsuHPI GGTGA 2 cut(s) 396, 525
AvaI CYCGRG 3 cut(s) 316, 394, 468
AvaII GGWCC 4 cut(s) 225, 432, 585, 657
BaeGI GKGCMC 2 cut(s) 248, 444
BamHI GGATCC 1 cut(s) 479
BbsI GAAGAC 1 cut(s) 181
Bbv12I GWGCWC 1 cut(s) 644
BbvI GCAGC 3 cut(s) 45, 402, 465
BceAI ACGGC 1 cut(s) 660
BciT130I CCWGG 1 cut(s) 683
BcnI CCSGG 4 cut(s) 197, 317, 318, 610
BcoDI GTCTC 1 cut(s) 535
BfaI CTAG 1 cut(s) 102
BglI GCCNNNNNGGC 1 cut(s) 611
BisI GCNGC 8 cut(s) 59, 157, 366, 382, 391, 454, 606, 652
BlsI GCNGC 8 cut(s) 60, 158, 367, 383, 392, 455, 607, 653
Bme1390I CCNGG 5 cut(s) 197, 317, 318, 610, 683
Bme18I GGWCC 4 cut(s) 225, 432, 585, 657
BmeT110I CYCGRG 3 cut(s) 316, 394, 468
BmgBI CACGTC 1 cut(s) 634
BmgT120I GGNCC 5 cut(s) 225, 432, 585, 603, 657
BmiI GGNNCC 5 cut(s) 226, 433, 434, 481, 659
BmrFI CCNGG 5 cut(s) 197, 317, 318, 610, 683
BmrI ACTGGG 2 cut(s) 337, 438
BmsI GCATC 1 cut(s) 538
BmuI ACTGGG 2 cut(s) 337, 438
BpiI GAAGAC 1 cut(s) 181
BpuMI CCSGG 4 cut(s) 197, 317, 318, 610
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 535
BsaJI CCNNGG 7 cut(s) 79, 316, 382, 469, 536, 609, 682
BsaWI WCCGGW 2 cut(s) 590, 618
BsaXI ACNNNNNCTCC 2 cut(s) 649, 679
Bsc4I CCNNNNNNNGG 4 cut(s) 261, 364, 654, 682
Bse118I RCCGGY 2 cut(s) 357, 566
Bse1I ACTGG 4 cut(s) 69, 291, 343, 433
BseAI TCCGGA 1 cut(s) 590
BseBI CCWGG 1 cut(s) 683
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 79, 316, 382, 469, 536, 609, 682
BseLI CCNNNNNNNGG 4 cut(s) 261, 364, 654, 682
BseMII CTCAG 1 cut(s) 288
BseNI ACTGG 4 cut(s) 69, 291, 343, 433
BseSI GKGCMC 2 cut(s) 248, 444
BseXI GCAGC 3 cut(s) 45, 402, 465
BseYI CCCAGC 2 cut(s) 161, 443
Bsh1236I CGCG 3 cut(s) 365, 384, 630
Bsh1285I CGRYCG 2 cut(s) 306, 567
BshFI GGCC 2 cut(s) 138, 605
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 306, 567
BsiHKAI GWGCWC 1 cut(s) 644
BsiHKCI CYCGRG 3 cut(s) 316, 394, 468
BsiSI CCGG 7 cut(s) 197, 317, 358, 567, 591, 609, 619
BslFI GGGAC 3 cut(s) 335, 439, 445
BslI CCNNNNNNNGG 4 cut(s) 261, 364, 654, 682
BsmAI GTCTC 1 cut(s) 535
BsmFI GGGAC 3 cut(s) 335, 439, 445
BsnI GGCC 2 cut(s) 138, 605
Bso31I GGTCTC 1 cut(s) 535
BsoBI CYCGRG 3 cut(s) 316, 394, 468
Bsp1286I GDGCHC 3 cut(s) 248, 444, 644
Bsp13I TCCGGA 1 cut(s) 590
Bsp143I GATC 4 cut(s) 26, 128, 199, 479
BspANI GGCC 2 cut(s) 138, 605
BspCNI CTCAG 1 cut(s) 289
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 590
BspFNI CGCG 3 cut(s) 365, 384, 630
BspLI GGNNCC 5 cut(s) 226, 433, 434, 481, 659
BspPI GGATC 5 cut(s) 34, 136, 207, 474, 487
BspQI GCTCTTC 2 cut(s) 4, 649
BspTNI GGTCTC 1 cut(s) 535
BsrBI CCGCTC 1 cut(s) 375
BsrFI RCCGGY 2 cut(s) 357, 566
BsrI ACTGG 4 cut(s) 69, 291, 343, 433
BssAI RCCGGY 2 cut(s) 357, 566
BssECI CCNNGG 7 cut(s) 79, 316, 382, 469, 536, 609, 682
BssMI GATC 4 cut(s) 26, 128, 199, 479
BssT1I CCWWGG 1 cut(s) 536
Bst2UI CCWGG 1 cut(s) 683
Bst4CI ACNGT 1 cut(s) 307
Bst6I CTCTTC 2 cut(s) 4, 649
BstC8I GCNNGC 5 cut(s) 207, 217, 359, 363, 693
BstDEI CTNAG 1 cut(s) 297
BstDSI CCRYGG 2 cut(s) 79, 382
BstFNI CGCG 3 cut(s) 365, 384, 630
BstHHI GCGC 1 cut(s) 616
BstKTI GATC 4 cut(s) 29, 131, 202, 482
BstMAI GTCTC 1 cut(s) 535
BstMBI GATC 4 cut(s) 26, 128, 199, 479
BstMCI CGRYCG 2 cut(s) 306, 567
BstNI CCWGG 1 cut(s) 683
BstSCI CCNGG 5 cut(s) 195, 315, 316, 608, 681
BstSLI GKGCMC 2 cut(s) 248, 444
BstUI CGCG 3 cut(s) 365, 384, 630
BstV1I GCAGC 3 cut(s) 45, 402, 465
BstV2I GAAGAC 1 cut(s) 181
BstX2I RGATCY 1 cut(s) 479
BstYI RGATCY 1 cut(s) 479
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 2 cut(s) 138, 605
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 2 cut(s) 79, 382
BtrI CACGTC 1 cut(s) 634
BtsI GCAGTG 1 cut(s) 248
BtsIMutI CAGTG 1 cut(s) 248
Cac8I GCNNGC 5 cut(s) 207, 217, 359, 363, 693
CaiI CAGNNNCTG 2 cut(s) 528, 654
CfoI GCGC 1 cut(s) 616
Cfr10I RCCGGY 2 cut(s) 357, 566
Cfr13I GGNCC 5 cut(s) 225, 432, 585, 603, 657
Cfr42I CCGCGG 1 cut(s) 385
Cfr9I CCCGGG 1 cut(s) 316
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 2 cut(s) 288, 561
CviQI GTAC 2 cut(s) 288, 561
DdeI CTNAG 1 cut(s) 297
DpnI GATC 4 cut(s) 28, 130, 201, 481
DpnII GATC 4 cut(s) 26, 128, 199, 479
DraI TTTAAA 1 cut(s) 109
DraIII CACNNNGTG 1 cut(s) 153
Eam1104I CTCTTC 2 cut(s) 4, 649
EarI CTCTTC 2 cut(s) 4, 649
EciI GGCGGA 2 cut(s) 182, 657
Eco130I CCWWGG 1 cut(s) 536
Eco31I GGTCTC 1 cut(s) 535
Eco47I GGWCC 4 cut(s) 225, 432, 585, 657
Eco88I CYCGRG 3 cut(s) 316, 394, 468
EcoO109I RGGNCCY 1 cut(s) 432
EcoRII CCWGG 1 cut(s) 681
EcoT14I CCWWGG 1 cut(s) 536
ErhI CCWWGG 1 cut(s) 536
FaiI YATR 2 cut(s) 47, 557
FaqI GGGAC 3 cut(s) 335, 439, 445
FauI CCCGC 4 cut(s) 214, 256, 362, 380
FblI GTMKAC 1 cut(s) 302
Fnu4HI GCNGC 8 cut(s) 59, 157, 366, 382, 391, 454, 606, 652
Fsp4HI GCNGC 8 cut(s) 59, 157, 366, 382, 391, 454, 606, 652
FspBI CTAG 1 cut(s) 102
GlaI GCGC 1 cut(s) 615
GluI GCNGC 8 cut(s) 59, 157, 366, 382, 391, 454, 606, 652
GsaI CCCAGC 2 cut(s) 165, 447
HaeIII GGCC 2 cut(s) 138, 605
HapII CCGG 7 cut(s) 197, 317, 358, 567, 591, 609, 619
HhaI GCGC 1 cut(s) 616
Hin6I GCGC 1 cut(s) 614
HinP1I GCGC 1 cut(s) 614
HincII GTYRAC 1 cut(s) 303
HindII GTYRAC 1 cut(s) 303
HinfI GANTC 3 cut(s) 257, 274, 299
HpaII CCGG 7 cut(s) 197, 317, 358, 567, 591, 609, 619
HphI GGTGA 2 cut(s) 396, 525
Hpy166II GTNNAC 3 cut(s) 303, 404, 533
Hpy188I TCNGA 4 cut(s) 94, 256, 273, 298
Hpy188III TCNNGA 4 cut(s) 148, 424, 468, 591
Hpy8I GTNNAC 3 cut(s) 303, 404, 533
Hpy99I CGWCG 3 cut(s) 44, 419, 635
HpyAV CCTTC 2 cut(s) 17, 325
HpyCH4III ACNGT 1 cut(s) 307
HpyCH4IV ACGT 2 cut(s) 39, 633
HpyF3I CTNAG 1 cut(s) 297
HpySE526I ACGT 2 cut(s) 39, 633
HspAI GCGC 1 cut(s) 614
KflI GGGWCCC 1 cut(s) 432
Kpn2I TCCGGA 1 cut(s) 590
KroI GCCGGC 1 cut(s) 357
KroNI GCCGGC 1 cut(s) 359
KspI CCGCGG 1 cut(s) 385
Kzo9I GATC 4 cut(s) 26, 128, 199, 479
LguI GCTCTTC 2 cut(s) 4, 649
LmnI GCTCC 1 cut(s) 334
Lsp1109I GCAGC 3 cut(s) 45, 402, 465
LweI GCATC 1 cut(s) 538
MaeI CTAG 1 cut(s) 102
MaeII ACGT 2 cut(s) 39, 633
MaeIII GTNAC 2 cut(s) 83, 473
MalI GATC 4 cut(s) 28, 130, 201, 481
MbiI CCGCTC 1 cut(s) 375
MboI GATC 4 cut(s) 26, 128, 199, 479
MboII GAAGA 3 cut(s) 21, 181, 636
MflI RGATCY 1 cut(s) 479
MhlI GDGCHC 3 cut(s) 248, 444, 644
MluCI AATT 1 cut(s) 110
MlyI GAGTC 1 cut(s) 308
MnlI CCTC 8 cut(s) 109, 230, 262, 459, 464, 518, 598, 675
MroI TCCGGA 1 cut(s) 590
MroNI GCCGGC 1 cut(s) 357
MseI TTAA 2 cut(s) 108, 699
MspA1I CMGCKG 2 cut(s) 384, 654
MspI CCGG 7 cut(s) 197, 317, 358, 567, 591, 609, 619
MspR9I CCNGG 5 cut(s) 197, 317, 318, 610, 683
MvaI CCWGG 1 cut(s) 683
MvnI CGCG 3 cut(s) 365, 384, 630
NaeI GCCGGC 1 cut(s) 359
NciI CCSGG 4 cut(s) 197, 317, 318, 610
NdeII GATC 4 cut(s) 26, 128, 199, 479
NgoMIV GCCGGC 1 cut(s) 357
NlaIV GGNNCC 5 cut(s) 226, 433, 434, 481, 659
NmeAIII GCCGAG 1 cut(s) 696
PaeR7I CTCGAG 1 cut(s) 394
PciSI GCTCTTC 2 cut(s) 4, 649
PdiI GCCGGC 1 cut(s) 359
PfeI GAWTC 2 cut(s) 257, 274
PflFI GACNNNGTC 1 cut(s) 185
PflMI CCANNNNNTGG 1 cut(s) 654
PkrI GCNGC 8 cut(s) 60, 158, 367, 383, 392, 455, 607, 653
PleI GAGTC 1 cut(s) 307
PpsI GAGTC 1 cut(s) 307
PpuMI RGGWCCY 1 cut(s) 432
Psp5II RGGWCCY 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 681
PspFI CCCAGC 2 cut(s) 161, 443
PspGI CCWGG 1 cut(s) 681
PspN4I GGNNCC 5 cut(s) 226, 433, 434, 481, 659
PspPI GGNCC 5 cut(s) 225, 432, 585, 603, 657
PspPPI RGGWCCY 1 cut(s) 432
PspXI VCTCGAGB 1 cut(s) 394
PstNI CAGNNNCTG 2 cut(s) 528, 654
PsuI RGATCY 1 cut(s) 479
PsyI GACNNNGTC 1 cut(s) 185
RsaI GTAC 2 cut(s) 289, 562
RsaNI GTAC 2 cut(s) 288, 561
SacII CCGCGG 1 cut(s) 385
SalI GTCGAC 1 cut(s) 301
SapI GCTCTTC 2 cut(s) 4, 649
SaqAI TTAA 2 cut(s) 108, 699
SatI GCNGC 8 cut(s) 59, 157, 366, 382, 391, 454, 606, 652
Sau3AI GATC 4 cut(s) 26, 128, 199, 479
Sau96I GGNCC 5 cut(s) 225, 432, 585, 603, 657
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 5 cut(s) 197, 317, 318, 610, 683
SduI GDGCHC 3 cut(s) 248, 444, 644
SfaNI GCATC 1 cut(s) 538
Sfr274I CTCGAG 1 cut(s) 394
Sfr303I CCGCGG 1 cut(s) 385
SgrBI CCGCGG 1 cut(s) 385
SinI GGWCC 4 cut(s) 225, 432, 585, 657
SlaI CTCGAG 1 cut(s) 394
SmaI CCCGGG 1 cut(s) 318
SmlI CTYRAG 1 cut(s) 394
SmoI CTYRAG 1 cut(s) 394
Sse9I AATT 1 cut(s) 110
SspMI CTAG 1 cut(s) 102
StyD4I CCNGG 5 cut(s) 195, 315, 316, 608, 681
StyI CCWWGG 1 cut(s) 536
TaaI ACNGT 1 cut(s) 307
TaiI ACGT 2 cut(s) 42, 636
TaqI TCGA 4 cut(s) 21, 131, 302, 395
TaqII GACCGA 1 cut(s) 573
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 159, 368, 384, 608, 654
TfiI GAWTC 2 cut(s) 257, 274
Tru1I TTAA 2 cut(s) 108, 699
Tru9I TTAA 2 cut(s) 108, 699
TscAI CASTG 1 cut(s) 248
TseI GCWGC 3 cut(s) 58, 390, 453
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 275, 277, 337, 492
TspMI CCCGGG 1 cut(s) 316
TspRI CASTG 1 cut(s) 248
Tth111I GACNNNGTC 1 cut(s) 185
Van91I CCANNNNNTGG 1 cut(s) 654
VpaK11BI GGWCC 4 cut(s) 225, 432, 585, 657
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 394
XmaI CCCGGG 1 cut(s) 316
XmiI GTMKAC 1 cut(s) 302
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.