Rroxscaffold_35G00441050

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000035
OG0000098
Physical Location & Seq
Forward (+)
16917 .. 18111
1195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_35G00441050.1

Sequence Viewer

Length: 657 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGATTATCCCTGTGGACACCTGCGTTATCTTTTAACGGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCGAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

218

Amino Acids

24.51

Weight (kDa)

10.9

Isoelectric Point (pI)

68.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 96
Acc36I ACCTGC 1 cut(s) 96
AccB1I GGYRCC 1 cut(s) 570
AccB7I CCANNNNNTGG 1 cut(s) 609
AccBSI CCGCTC 1 cut(s) 331
AccI GTMKAC 1 cut(s) 256
AccII CGCG 3 cut(s) 321, 340, 585
AccIII TCCGGA 1 cut(s) 546
AclWI GGATC 4 cut(s) 34, 162, 429, 442
AcoI YGGCCR 1 cut(s) 311
AcyI GRCGYC 1 cut(s) 571
AfaI GTAC 2 cut(s) 244, 517
AfiI CCNNNNNNNGG 9 cut(s) 171, 190, 216, 309, 313, 320, 609, 622, 638
AgsI TTSAA 2 cut(s) 265, 556
AjiI CACGTC 1 cut(s) 589
AjnI CCWGG 1 cut(s) 637
AluBI AGCT 1 cut(s) 349
AluI AGCT 1 cut(s) 349
Alw21I GWGCWC 1 cut(s) 599
Alw26I GTCTC 1 cut(s) 490
AlwI GGATC 4 cut(s) 34, 162, 429, 442
AlwNI CAGNNNCTG 2 cut(s) 483, 609
Ama87I CYCGRG 4 cut(s) 270, 350, 406, 423
Aor13HI TCCGGA 1 cut(s) 546
AoxI GGCC 2 cut(s) 311, 559
ApeKI GCWGC 2 cut(s) 58, 346
AspLEI GCGC 1 cut(s) 573
AspS9I GGNCC 6 cut(s) 181, 382, 388, 541, 559, 612
AsuC2I CCSGG 7 cut(s) 152, 271, 272, 310, 386, 523, 566
AsuHPI GGTGA 2 cut(s) 352, 480
AvaI CYCGRG 4 cut(s) 270, 350, 406, 423
AvaII GGWCC 5 cut(s) 181, 382, 388, 541, 612
BaeGI GKGCMC 2 cut(s) 203, 400
BamHI GGATCC 1 cut(s) 434
BanI GGYRCC 1 cut(s) 570
BbsI GAAGAC 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 599
BbvI GCAGC 2 cut(s) 45, 358
BceAI ACGGC 1 cut(s) 616
BciT130I CCWGG 1 cut(s) 639
BcnI CCSGG 7 cut(s) 152, 271, 272, 310, 386, 523, 566
BcoDI GTCTC 1 cut(s) 490
BfoI RGCGCY 1 cut(s) 574
BfuAI ACCTGC 1 cut(s) 96
BisI GCNGC 7 cut(s) 59, 113, 322, 338, 347, 562, 607
BlpI GCTNAGC 1 cut(s) 627
BlsI GCNGC 7 cut(s) 60, 114, 323, 339, 348, 563, 608
Bme1390I CCNGG 8 cut(s) 152, 271, 272, 310, 386, 523, 566, 639
Bme18I GGWCC 5 cut(s) 181, 382, 388, 541, 612
BmeT110I CYCGRG 4 cut(s) 270, 350, 406, 423
BmgBI CACGTC 1 cut(s) 589
BmgT120I GGNCC 6 cut(s) 181, 382, 388, 541, 559, 612
BmiI GGNNCC 7 cut(s) 182, 383, 389, 390, 436, 572, 614
BmrFI CCNGG 8 cut(s) 152, 271, 272, 310, 386, 523, 566, 639
BmrI ACTGGG 1 cut(s) 292
BmsI GCATC 1 cut(s) 493
BmuI ACTGGG 1 cut(s) 292
BpiI GAAGAC 1 cut(s) 136
Bpu1102I GCTNAGC 1 cut(s) 627
BpuMI CCSGG 7 cut(s) 152, 271, 272, 310, 386, 523, 566
BsaHI GRCGYC 1 cut(s) 571
BsaI GGTCTC 1 cut(s) 490
BsaJI CCNNGG 8 cut(s) 270, 271, 308, 338, 424, 491, 565, 638
BsaWI WCCGGW 1 cut(s) 546
BsaXI ACNNNNNCTCC 2 cut(s) 604, 634
Bsc4I CCNNNNNNNGG 9 cut(s) 171, 190, 216, 309, 313, 320, 609, 622, 638
Bse118I RCCGGY 1 cut(s) 313
Bse1I ACTGG 2 cut(s) 246, 298
BseAI TCCGGA 1 cut(s) 546
BseBI CCWGG 1 cut(s) 639
BseDI CCNNGG 8 cut(s) 270, 271, 308, 338, 424, 491, 565, 638
BseGI GGATG 1 cut(s) 112
BseLI CCNNNNNNNGG 9 cut(s) 171, 190, 216, 309, 313, 320, 609, 622, 638
BseMII CTCAG 1 cut(s) 618
BseNI ACTGG 2 cut(s) 246, 298
BseSI GKGCMC 2 cut(s) 203, 400
BseX3I CGGCCG 1 cut(s) 311
BseXI GCAGC 2 cut(s) 45, 358
BseYI CCCAGC 2 cut(s) 117, 399
Bsh1236I CGCG 3 cut(s) 321, 340, 585
Bsh1285I CGRYCG 2 cut(s) 314, 522
BshFI GGCC 2 cut(s) 313, 561
BshNI GGYRCC 1 cut(s) 570
BsiEI CGRYCG 2 cut(s) 314, 522
BsiHKAI GWGCWC 1 cut(s) 599
BsiHKCI CYCGRG 4 cut(s) 270, 350, 406, 423
BslFI GGGAC 3 cut(s) 290, 395, 401
BslI CCNNNNNNNGG 9 cut(s) 171, 190, 216, 309, 313, 320, 609, 622, 638
BsmAI GTCTC 1 cut(s) 490
BsmFI GGGAC 3 cut(s) 290, 395, 401
BsnI GGCC 2 cut(s) 313, 561
Bso31I GGTCTC 1 cut(s) 490
BsoBI CYCGRG 4 cut(s) 270, 350, 406, 423
Bsp1286I GDGCHC 3 cut(s) 203, 400, 599
Bsp13I TCCGGA 1 cut(s) 546
Bsp143I GATC 3 cut(s) 26, 154, 434
Bsp1720I GCTNAGC 1 cut(s) 627
BspANI GGCC 2 cut(s) 313, 561
BspCNI CTCAG 1 cut(s) 619
BspEI TCCGGA 1 cut(s) 546
BspFNI CGCG 3 cut(s) 321, 340, 585
BspLI GGNNCC 7 cut(s) 182, 383, 389, 390, 436, 572, 614
BspMI ACCTGC 1 cut(s) 96
BspPI GGATC 4 cut(s) 34, 162, 429, 442
BspQI GCTCTTC 2 cut(s) 4, 604
BspT107I GGYRCC 1 cut(s) 570
BspTNI GGTCTC 1 cut(s) 490
BsrBI CCGCTC 1 cut(s) 331
BsrFI RCCGGY 1 cut(s) 313
BsrI ACTGG 2 cut(s) 246, 298
BssAI RCCGGY 1 cut(s) 313
BssECI CCNNGG 8 cut(s) 270, 271, 308, 338, 424, 491, 565, 638
BssMI GATC 3 cut(s) 26, 154, 434
BssNI GRCGYC 1 cut(s) 571
BssT1I CCWWGG 1 cut(s) 491
Bst2UI CCWGG 1 cut(s) 639
Bst4CI ACNGT 1 cut(s) 261
Bst6I CTCTTC 2 cut(s) 4, 604
BstACI GRCGYC 1 cut(s) 571
BstC8I GCNNGC 4 cut(s) 162, 315, 319, 649
BstDEI CTNAG 1 cut(s) 627
BstDSI CCRYGG 1 cut(s) 338
BstF5I GGATG 1 cut(s) 112
BstFNI CGCG 3 cut(s) 321, 340, 585
BstH2I RGCGCY 1 cut(s) 574
BstHHI GCGC 1 cut(s) 573
BstKTI GATC 3 cut(s) 29, 157, 437
BstMAI GTCTC 1 cut(s) 490
BstMBI GATC 3 cut(s) 26, 154, 434
BstMCI CGRYCG 2 cut(s) 314, 522
BstMWI GCNNNNNNNGC 9 cut(s) 50, 118, 337, 343, 346, 352, 532, 570, 603
BstNI CCWGG 1 cut(s) 639
BstSCI CCNGG 8 cut(s) 150, 269, 270, 308, 384, 521, 564, 637
BstSLI GKGCMC 2 cut(s) 203, 400
BstUI CGCG 3 cut(s) 321, 340, 585
BstV1I GCAGC 2 cut(s) 45, 358
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 1 cut(s) 434
BstYI RGATCY 1 cut(s) 434
BstZI CGGCCG 1 cut(s) 311
BsuRI GGCC 2 cut(s) 313, 561
BtgI CCRYGG 1 cut(s) 338
BtrI CACGTC 1 cut(s) 589
BtsCI GGATG 1 cut(s) 112
BtsI GCAGTG 1 cut(s) 203
BtsIMutI CAGTG 1 cut(s) 203
BveI ACCTGC 1 cut(s) 96
Cac8I GCNNGC 4 cut(s) 162, 315, 319, 649
CaiI CAGNNNCTG 2 cut(s) 483, 609
CfoI GCGC 1 cut(s) 573
Cfr10I RCCGGY 1 cut(s) 313
Cfr13I GGNCC 6 cut(s) 181, 382, 388, 541, 559, 612
Cfr42I CCGCGG 1 cut(s) 341
Cfr9I CCCGGG 1 cut(s) 270
Csp6I GTAC 2 cut(s) 243, 516
CviQI GTAC 2 cut(s) 243, 516
DdeI CTNAG 1 cut(s) 627
DinI GGCGCC 1 cut(s) 572
DpnI GATC 3 cut(s) 28, 156, 436
DpnII GATC 3 cut(s) 26, 154, 434
EaeI YGGCCR 1 cut(s) 311
EagI CGGCCG 1 cut(s) 311
Eam1104I CTCTTC 2 cut(s) 4, 604
EarI CTCTTC 2 cut(s) 4, 604
EciI GGCGGA 1 cut(s) 137
EclXI CGGCCG 1 cut(s) 311
Eco130I CCWWGG 1 cut(s) 491
Eco31I GGTCTC 1 cut(s) 490
Eco47I GGWCC 5 cut(s) 181, 382, 388, 541, 612
Eco52I CGGCCG 1 cut(s) 311
Eco88I CYCGRG 4 cut(s) 270, 350, 406, 423
EcoO109I RGGNCCY 1 cut(s) 388
EcoRII CCWGG 1 cut(s) 637
EcoT14I CCWWGG 1 cut(s) 491
EgeI GGCGCC 1 cut(s) 572
EheI GGCGCC 1 cut(s) 572
ErhI CCWWGG 1 cut(s) 491
FaiI YATR 2 cut(s) 47, 512
FalI AAGNNNNNCTT 2 cut(s) 159, 191
FaqI GGGAC 3 cut(s) 290, 395, 401
FauI CCCGC 3 cut(s) 169, 211, 336
FblI GTMKAC 1 cut(s) 256
Fnu4HI GCNGC 7 cut(s) 59, 113, 322, 338, 347, 562, 607
FokI GGATG 1 cut(s) 119
Fsp4HI GCNGC 7 cut(s) 59, 113, 322, 338, 347, 562, 607
GlaI GCGC 1 cut(s) 572
GluI GCNGC 7 cut(s) 59, 113, 322, 338, 347, 562, 607
GsaI CCCAGC 2 cut(s) 121, 403
HaeII RGCGCY 1 cut(s) 574
HaeIII GGCC 2 cut(s) 313, 561
HhaI GCGC 1 cut(s) 573
Hin1I GRCGYC 1 cut(s) 571
Hin6I GCGC 1 cut(s) 571
HinP1I GCGC 1 cut(s) 571
HincII GTYRAC 1 cut(s) 257
HindII GTYRAC 1 cut(s) 257
HinfI GANTC 3 cut(s) 212, 229, 253
HphI GGTGA 2 cut(s) 352, 480
Hpy166II GTNNAC 4 cut(s) 83, 257, 360, 488
Hpy188I TCNGA 2 cut(s) 211, 228
Hpy188III TCNNGA 3 cut(s) 380, 423, 547
Hpy8I GTNNAC 4 cut(s) 83, 257, 360, 488
Hpy99I CGWCG 3 cut(s) 44, 375, 590
HpyAV CCTTC 2 cut(s) 17, 280
HpyCH4III ACNGT 1 cut(s) 261
HpyCH4IV ACGT 2 cut(s) 39, 588
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 118, 337, 343, 346, 352, 532, 570, 603
HpyF3I CTNAG 1 cut(s) 627
HpySE526I ACGT 2 cut(s) 39, 588
Hsp92I GRCGYC 1 cut(s) 571
HspAI GCGC 1 cut(s) 571
KasI GGCGCC 1 cut(s) 570
KflI GGGWCCC 1 cut(s) 388
Kpn2I TCCGGA 1 cut(s) 546
KroI GCCGGC 1 cut(s) 313
KroNI GCCGGC 1 cut(s) 315
KspI CCGCGG 1 cut(s) 341
Kzo9I GATC 3 cut(s) 26, 154, 434
LguI GCTCTTC 2 cut(s) 4, 604
LmnI GCTCC 1 cut(s) 289
Lsp1109I GCAGC 2 cut(s) 45, 358
LweI GCATC 1 cut(s) 493
MaeII ACGT 2 cut(s) 39, 588
MaeIII GTNAC 1 cut(s) 428
MalI GATC 3 cut(s) 28, 156, 436
MbiI CCGCTC 1 cut(s) 331
MboI GATC 3 cut(s) 26, 154, 434
MboII GAAGA 3 cut(s) 21, 136, 591
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 3 cut(s) 203, 400, 599
Mly113I GGCGCC 1 cut(s) 571
MlyI GAGTC 1 cut(s) 262
MnlI CCTC 8 cut(s) 165, 184, 217, 415, 419, 473, 554, 630
MroI TCCGGA 1 cut(s) 546
MroNI GCCGGC 1 cut(s) 313
MseI TTAA 2 cut(s) 101, 655
MspA1I CMGCKG 2 cut(s) 340, 609
MspR9I CCNGG 8 cut(s) 152, 271, 272, 310, 386, 523, 566, 639
MvaI CCWGG 1 cut(s) 639
MvnI CGCG 3 cut(s) 321, 340, 585
MwoI GCNNNNNNNGC 9 cut(s) 50, 118, 337, 343, 346, 352, 532, 570, 603
NaeI GCCGGC 1 cut(s) 315
NarI GGCGCC 1 cut(s) 571
NciI CCSGG 7 cut(s) 152, 271, 272, 310, 386, 523, 566
NdeII GATC 3 cut(s) 26, 154, 434
NgoMIV GCCGGC 1 cut(s) 313
NlaIV GGNNCC 7 cut(s) 182, 383, 389, 390, 436, 572, 614
PaeR7I CTCGAG 2 cut(s) 350, 406
PaqCI CACCTGC 1 cut(s) 96
PciSI GCTCTTC 2 cut(s) 4, 604
PdiI GCCGGC 1 cut(s) 315
PfeI GAWTC 2 cut(s) 212, 229
PflFI GACNNNGTC 1 cut(s) 140
PflMI CCANNNNNTGG 1 cut(s) 609
PkrI GCNGC 7 cut(s) 60, 114, 323, 339, 348, 563, 608
PleI GAGTC 1 cut(s) 261
PluTI GGCGCC 1 cut(s) 574
PpsI GAGTC 1 cut(s) 261
PpuMI RGGWCCY 1 cut(s) 388
Psp5II RGGWCCY 1 cut(s) 388
Psp6I CCWGG 1 cut(s) 637
PspFI CCCAGC 2 cut(s) 117, 399
PspGI CCWGG 1 cut(s) 637
PspN4I GGNNCC 7 cut(s) 182, 383, 389, 390, 436, 572, 614
PspPI GGNCC 6 cut(s) 181, 382, 388, 541, 559, 612
PspPPI RGGWCCY 1 cut(s) 388
PspXI VCTCGAGB 2 cut(s) 350, 406
PstNI CAGNNNCTG 2 cut(s) 483, 609
PsuI RGATCY 1 cut(s) 434
PsyI GACNNNGTC 1 cut(s) 140
RsaI GTAC 2 cut(s) 244, 517
RsaNI GTAC 2 cut(s) 243, 516
SacII CCGCGG 1 cut(s) 341
SalI GTCGAC 1 cut(s) 255
SapI GCTCTTC 2 cut(s) 4, 604
SaqAI TTAA 2 cut(s) 101, 655
SatI GCNGC 7 cut(s) 59, 113, 322, 338, 347, 562, 607
Sau3AI GATC 3 cut(s) 26, 154, 434
Sau96I GGNCC 6 cut(s) 181, 382, 388, 541, 559, 612
SchI GAGTC 1 cut(s) 262
ScrFI CCNGG 8 cut(s) 152, 271, 272, 310, 386, 523, 566, 639
SduI GDGCHC 3 cut(s) 203, 400, 599
SetI ASST 9 cut(s) 42, 90, 136, 351, 430, 493, 502, 591, 622
SfaNI GCATC 1 cut(s) 493
SfoI GGCGCC 1 cut(s) 572
Sfr274I CTCGAG 2 cut(s) 350, 406
Sfr303I CCGCGG 1 cut(s) 341
SgrBI CCGCGG 1 cut(s) 341
SinI GGWCC 5 cut(s) 181, 382, 388, 541, 612
SlaI CTCGAG 2 cut(s) 350, 406
SmaI CCCGGG 1 cut(s) 272
SmlI CTYRAG 2 cut(s) 350, 406
SmoI CTYRAG 2 cut(s) 350, 406
SspDI GGCGCC 1 cut(s) 570
StyD4I CCNGG 8 cut(s) 150, 269, 270, 308, 384, 521, 564, 637
StyI CCWWGG 1 cut(s) 491
TaaI ACNGT 1 cut(s) 261
TaiI ACGT 2 cut(s) 42, 591
TaqI TCGA 5 cut(s) 21, 251, 256, 351, 407
TaqII GACCGA 1 cut(s) 529
TauI GCSGC 5 cut(s) 115, 324, 340, 564, 609
TfiI GAWTC 2 cut(s) 212, 229
Tru1I TTAA 2 cut(s) 101, 655
Tru9I TTAA 2 cut(s) 101, 655
TscAI CASTG 1 cut(s) 203
TseI GCWGC 2 cut(s) 58, 346
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 5 cut(s) 119, 230, 232, 292, 447
TspMI CCCGGG 1 cut(s) 270
TspRI CASTG 1 cut(s) 203
Tth111I GACNNNGTC 1 cut(s) 140
Van91I CCANNNNNTGG 1 cut(s) 609
VpaK11BI GGWCC 5 cut(s) 181, 382, 388, 541, 612
XhoI CTCGAG 2 cut(s) 350, 406
XmaI CCCGGG 1 cut(s) 270
XmiI GTMKAC 1 cut(s) 256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.