Rroxscaffold_116G00451710

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000116
OG0000098
Physical Location & Seq
Forward (+)
6346 .. 7602
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_116G00451710.1

Sequence Viewer

Length: 1086 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGTCTTCTTTCCCCGCCGATTCTCGCCAAGCCCGTTCCCTTGGCCGTGGTTTCGCCGGATAGTAGACAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCTCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGCCGAGCCGTTTCCAGTGTGGGCAGGCTGTTAAACGTAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGAATTTTAACCCGATTCCCTTTTCGGTTCGCGCGAGACGCGCTATCGACGGGTTACCCGCCCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCTCGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

361

Amino Acids

38.24

Weight (kDa)

11.18

Isoelectric Point (pI)

71.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 763
AccBSI CCGCTC 2 cut(s) 399, 986
AccI GTMKAC 2 cut(s) 256, 326
AccII CGCG 8 cut(s) 389, 408, 653, 837, 839, 846, 1025, 1080
AccIII TCCGGA 1 cut(s) 614
AclI AACGTT 2 cut(s) 95, 777
AclWI GGATC 4 cut(s) 23, 498, 511, 883
AcoI YGGCCR 4 cut(s) 234, 380, 981, 1063
AcsI RAATTY 1 cut(s) 808
AcyI GRCGYC 1 cut(s) 760
AfaI GTAC 2 cut(s) 314, 586
AfiI CCNNNNNNNGG 6 cut(s) 51, 77, 378, 677, 799, 1065
AgsI TTSAA 4 cut(s) 335, 624, 933, 947
AjiI CACGTC 2 cut(s) 657, 796
AluBI AGCT 2 cut(s) 186, 417
AluI AGCT 2 cut(s) 186, 417
Alw21I GWGCWC 1 cut(s) 667
Alw26I GTCTC 3 cut(s) 559, 767, 835
AlwI GGATC 4 cut(s) 23, 498, 511, 883
Ama87I CYCGRG 5 cut(s) 320, 340, 418, 492, 744
Aor13HI TCCGGA 1 cut(s) 614
AoxI GGCC 7 cut(s) 234, 380, 627, 748, 926, 981, 1063
ApeKI GCWGC 3 cut(s) 414, 477, 1013
ApoI RAATTY 1 cut(s) 808
AspLEI GCGC 6 cut(s) 294, 640, 839, 848, 1027, 1082
AspS9I GGNCC 7 cut(s) 42, 450, 456, 609, 627, 680, 749
AsuC2I CCSGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
AsuHPI GGTGA 2 cut(s) 420, 549
AvaI CYCGRG 5 cut(s) 320, 340, 418, 492, 744
AvaII GGWCC 5 cut(s) 42, 450, 456, 609, 680
BaeGI GKGCMC 2 cut(s) 64, 468
BamHI GGATCC 1 cut(s) 503
BanII GRGCYC 1 cut(s) 1047
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 667
BbvI GCAGC 3 cut(s) 426, 489, 1025
BceAI ACGGC 6 cut(s) 221, 683, 767, 884, 996, 1078
BcnI CCSGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
BcoDI GTCTC 3 cut(s) 559, 767, 835
BfaI CTAG 1 cut(s) 176
BglI GCCNNNNNGGC 2 cut(s) 635, 1062
BglII AGATCT 1 cut(s) 968
Bme1390I CCNGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
Bme18I GGWCC 5 cut(s) 42, 450, 456, 609, 680
BmeT110I CYCGRG 5 cut(s) 320, 340, 418, 492, 744
BmgBI CACGTC 2 cut(s) 657, 796
BmgT120I GGNCC 7 cut(s) 42, 450, 456, 609, 627, 680, 749
BmiI GGNNCC 9 cut(s) 43, 132, 451, 457, 458, 505, 682, 751, 912
BmrFI CCNGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
BmrI ACTGGG 1 cut(s) 361
BmsI GCATC 1 cut(s) 562
BmuI ACTGGG 1 cut(s) 361
BoxI GACNNNNGTC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 188
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
BsaHI GRCGYC 1 cut(s) 760
BsaI GGTCTC 1 cut(s) 559
BsaJI CCNNGG 9 cut(s) 231, 237, 340, 377, 406, 493, 560, 633, 745
BsaWI WCCGGW 1 cut(s) 614
BsaXI ACNNNNNCTCC 4 cut(s) 672, 702, 970, 1000
Bsc4I CCNNNNNNNGG 6 cut(s) 51, 77, 378, 677, 799, 1065
Bse118I RCCGGY 3 cut(s) 590, 991, 1065
Bse1I ACTGG 2 cut(s) 367, 705
BseAI TCCGGA 1 cut(s) 614
BseDI CCNNGG 9 cut(s) 231, 237, 340, 377, 406, 493, 560, 633, 745
BseLI CCNNNNNNNGG 6 cut(s) 51, 77, 378, 677, 799, 1065
BseNI ACTGG 2 cut(s) 367, 705
BseSI GKGCMC 2 cut(s) 64, 468
BseX3I CGGCCG 3 cut(s) 380, 981, 1063
BseXI GCAGC 3 cut(s) 426, 489, 1025
BseYI CCCAGC 1 cut(s) 467
BsgI GTGCAG 1 cut(s) 957
Bsh1236I CGCG 8 cut(s) 389, 408, 653, 837, 839, 846, 1025, 1080
Bsh1285I CGRYCG 6 cut(s) 330, 383, 591, 984, 1020, 1066
BshFI GGCC 7 cut(s) 236, 382, 629, 750, 928, 983, 1065
BsiEI CGRYCG 6 cut(s) 330, 383, 591, 984, 1020, 1066
BsiHKAI GWGCWC 1 cut(s) 667
BsiHKCI CYCGRG 5 cut(s) 320, 340, 418, 492, 744
BslFI GGGAC 4 cut(s) 359, 463, 469, 782
BslI CCNNNNNNNGG 6 cut(s) 51, 77, 378, 677, 799, 1065
BsmAI GTCTC 3 cut(s) 559, 767, 835
BsmBI CGTCTC 2 cut(s) 767, 835
BsmFI GGGAC 4 cut(s) 359, 463, 469, 782
BsnI GGCC 7 cut(s) 236, 382, 629, 750, 928, 983, 1065
Bso31I GGTCTC 1 cut(s) 559
BsoBI CYCGRG 5 cut(s) 320, 340, 418, 492, 744
Bsp1286I GDGCHC 4 cut(s) 64, 468, 667, 1047
Bsp13I TCCGGA 1 cut(s) 614
Bsp143I GATC 4 cut(s) 15, 503, 875, 968
BspANI GGCC 7 cut(s) 236, 382, 629, 750, 928, 983, 1065
BspEI TCCGGA 1 cut(s) 614
BspFNI CGCG 8 cut(s) 389, 408, 653, 837, 839, 846, 1025, 1080
BspLI GGNNCC 9 cut(s) 43, 132, 451, 457, 458, 505, 682, 751, 912
BspPI GGATC 4 cut(s) 23, 498, 511, 883
BspQI GCTCTTC 1 cut(s) 672
BspTNI GGTCTC 1 cut(s) 559
BsrBI CCGCTC 2 cut(s) 399, 986
BsrFI RCCGGY 3 cut(s) 590, 991, 1065
BsrI ACTGG 2 cut(s) 367, 705
BssAI RCCGGY 3 cut(s) 590, 991, 1065
BssECI CCNNGG 9 cut(s) 231, 237, 340, 377, 406, 493, 560, 633, 745
BssMI GATC 4 cut(s) 15, 503, 875, 968
BssNI GRCGYC 1 cut(s) 760
BssT1I CCWWGG 2 cut(s) 231, 560
Bst4CI ACNGT 2 cut(s) 266, 331
Bst6I CTCTTC 3 cut(s) 672, 745, 927
BstACI GRCGYC 1 cut(s) 760
BstC8I GCNNGC 5 cut(s) 23, 387, 550, 716, 993
BstDEI CTNAG 1 cut(s) 871
BstDSI CCRYGG 2 cut(s) 237, 406
BstEII GGTNACC 1 cut(s) 858
BstFNI CGCG 8 cut(s) 389, 408, 653, 837, 839, 846, 1025, 1080
BstHHI GCGC 6 cut(s) 294, 640, 839, 848, 1027, 1082
BstKTI GATC 4 cut(s) 18, 506, 878, 971
BstMAI GTCTC 3 cut(s) 559, 767, 835
BstMBI GATC 4 cut(s) 15, 503, 875, 968
BstMCI CGRYCG 6 cut(s) 330, 383, 591, 984, 1020, 1066
BstPAI GACNNNNGTC 1 cut(s) 178
BstPI GGTNACC 1 cut(s) 858
BstSCI CCNGG 7 cut(s) 11, 339, 340, 377, 452, 632, 798
BstSLI GKGCMC 2 cut(s) 64, 468
BstUI CGCG 8 cut(s) 389, 408, 653, 837, 839, 846, 1025, 1080
BstV1I GCAGC 3 cut(s) 426, 489, 1025
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 2 cut(s) 503, 968
BstYI RGATCY 2 cut(s) 503, 968
BstZI CGGCCG 3 cut(s) 380, 981, 1063
BsuRI GGCC 7 cut(s) 236, 382, 629, 750, 928, 983, 1065
BtgI CCRYGG 2 cut(s) 237, 406
BtrI CACGTC 2 cut(s) 657, 796
BtsI GCAGTG 2 cut(s) 38, 64
BtsIMutI CAGTG 4 cut(s) 38, 64, 271, 712
Cac8I GCNNGC 5 cut(s) 23, 387, 550, 716, 993
CfoI GCGC 6 cut(s) 294, 640, 839, 848, 1027, 1082
Cfr10I RCCGGY 3 cut(s) 590, 991, 1065
Cfr13I GGNCC 7 cut(s) 42, 450, 456, 609, 627, 680, 749
Cfr42I CCGCGG 1 cut(s) 409
Cfr9I CCCGGG 1 cut(s) 340
CseI GACGC 1 cut(s) 852
Csp6I GTAC 2 cut(s) 313, 585
CviAII CATG 3 cut(s) 289, 888, 907
CviQI GTAC 2 cut(s) 313, 585
DdeI CTNAG 1 cut(s) 871
DpnI GATC 4 cut(s) 17, 505, 877, 970
DpnII GATC 4 cut(s) 15, 503, 875, 968
EaeI YGGCCR 4 cut(s) 234, 380, 981, 1063
EagI CGGCCG 3 cut(s) 380, 981, 1063
Eam1104I CTCTTC 3 cut(s) 672, 745, 927
EarI CTCTTC 3 cut(s) 672, 745, 927
EciI GGCGGA 2 cut(s) 680, 978
EclXI CGGCCG 3 cut(s) 380, 981, 1063
Eco130I CCWWGG 2 cut(s) 231, 560
Eco24I GRGCYC 1 cut(s) 1047
Eco31I GGTCTC 1 cut(s) 559
Eco47I GGWCC 5 cut(s) 42, 450, 456, 609, 680
Eco52I CGGCCG 3 cut(s) 380, 981, 1063
Eco88I CYCGRG 5 cut(s) 320, 340, 418, 492, 744
Eco91I GGTNACC 1 cut(s) 858
EcoO109I RGGNCCY 2 cut(s) 456, 749
EcoO65I GGTNACC 1 cut(s) 858
EcoT14I CCWWGG 2 cut(s) 231, 560
EcoT38I GRGCYC 1 cut(s) 1047
ErhI CCWWGG 2 cut(s) 231, 560
Esp3I CGTCTC 2 cut(s) 767, 835
FaeI CATG 3 cut(s) 292, 891, 910
FaiI YATR 6 cut(s) 141, 290, 581, 889, 908, 1071
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FaqI GGGAC 4 cut(s) 359, 463, 469, 782
FatI CATG 3 cut(s) 288, 887, 906
FauI CCCGC 6 cut(s) 30, 72, 213, 404, 761, 871
FblI GTMKAC 2 cut(s) 256, 326
FriOI GRGCYC 1 cut(s) 1047
FspBI CTAG 1 cut(s) 176
GlaI GCGC 6 cut(s) 293, 639, 838, 847, 1026, 1081
GsaI CCCAGC 1 cut(s) 471
HaeIII GGCC 7 cut(s) 236, 382, 629, 750, 928, 983, 1065
HgaI GACGC 1 cut(s) 852
HhaI GCGC 6 cut(s) 294, 640, 839, 848, 1027, 1082
Hin1I GRCGYC 1 cut(s) 760
Hin1II CATG 3 cut(s) 292, 891, 910
Hin6I GCGC 6 cut(s) 292, 638, 837, 846, 1025, 1080
HinP1I GCGC 6 cut(s) 292, 638, 837, 846, 1025, 1080
HincII GTYRAC 2 cut(s) 327, 787
HindII GTYRAC 2 cut(s) 327, 787
HinfI GANTC 8 cut(s) 73, 179, 211, 271, 299, 323, 768, 820
HphI GGTGA 2 cut(s) 420, 549
Hpy166II GTNNAC 6 cut(s) 257, 327, 428, 557, 787, 904
Hpy188I TCNGA 5 cut(s) 72, 173, 298, 767, 807
Hpy188III TCNNGA 4 cut(s) 448, 492, 615, 744
Hpy8I GTNNAC 6 cut(s) 257, 327, 428, 557, 787, 904
Hpy99I CGWCG 6 cut(s) 443, 658, 762, 857, 982, 1064
HpyAV CCTTC 3 cut(s) 121, 349, 939
HpyCH4III ACNGT 2 cut(s) 266, 331
HpyCH4IV ACGT 6 cut(s) 95, 656, 726, 760, 777, 795
HpyCH4V TGCA 3 cut(s) 893, 974, 1013
HpyF3I CTNAG 1 cut(s) 871
HpySE526I ACGT 6 cut(s) 95, 656, 726, 760, 777, 795
Hsp92I GRCGYC 1 cut(s) 760
Hsp92II CATG 3 cut(s) 292, 891, 910
HspAI GCGC 6 cut(s) 292, 638, 837, 846, 1025, 1080
KflI GGGWCCC 1 cut(s) 456
Kpn2I TCCGGA 1 cut(s) 614
KroI GCCGGC 1 cut(s) 991
KroNI GCCGGC 1 cut(s) 993
KspI CCGCGG 1 cut(s) 409
Kzo9I GATC 4 cut(s) 15, 503, 875, 968
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 3 cut(s) 136, 358, 991
Lsp1109I GCAGC 3 cut(s) 426, 489, 1025
LweI GCATC 1 cut(s) 562
MaeI CTAG 1 cut(s) 176
MaeII ACGT 6 cut(s) 95, 656, 726, 760, 777, 795
MaeIII GTNAC 3 cut(s) 497, 858, 1074
MalI GATC 4 cut(s) 17, 505, 877, 970
MbiI CCGCTC 2 cut(s) 399, 986
MboI GATC 4 cut(s) 15, 503, 875, 968
MboII GAAGA 4 cut(s) 188, 659, 732, 914
MflI RGATCY 2 cut(s) 503, 968
MhlI GDGCHC 4 cut(s) 64, 468, 667, 1047
MluCI AATT 1 cut(s) 808
MlyI GAGTC 3 cut(s) 188, 332, 762
MmeI TCCRAC 2 cut(s) 151, 790
MroI TCCGGA 1 cut(s) 614
MroNI GCCGGC 1 cut(s) 991
MseI TTAA 5 cut(s) 98, 279, 722, 813, 1084
MspA1I CMGCKG 1 cut(s) 408
MspR9I CCNGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
MvnI CGCG 8 cut(s) 389, 408, 653, 837, 839, 846, 1025, 1080
NaeI GCCGGC 1 cut(s) 993
NciI CCSGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
NdeII GATC 4 cut(s) 15, 503, 875, 968
NgoMIV GCCGGC 1 cut(s) 991
NlaIII CATG 3 cut(s) 292, 891, 910
NlaIV GGNNCC 9 cut(s) 43, 132, 451, 457, 458, 505, 682, 751, 912
NmeAIII GCCGAG 2 cut(s) 719, 1026
NmuCI GTSAC 1 cut(s) 1074
PaeR7I CTCGAG 1 cut(s) 418
PciSI GCTCTTC 1 cut(s) 672
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 836
PdiI GCCGGC 1 cut(s) 993
PfeI GAWTC 5 cut(s) 73, 211, 271, 299, 820
PleI GAGTC 3 cut(s) 187, 331, 762
PpsI GAGTC 3 cut(s) 187, 331, 762
PpuMI RGGWCCY 1 cut(s) 456
PshAI GACNNNNGTC 1 cut(s) 178
Psp1406I AACGTT 2 cut(s) 95, 777
Psp5II RGGWCCY 1 cut(s) 456
PspEI GGTNACC 1 cut(s) 858
PspFI CCCAGC 1 cut(s) 467
PspN4I GGNNCC 9 cut(s) 43, 132, 451, 457, 458, 505, 682, 751, 912
PspPI GGNCC 7 cut(s) 42, 450, 456, 609, 627, 680, 749
PspPPI RGGWCCY 1 cut(s) 456
PspXI VCTCGAGB 1 cut(s) 418
PsuI RGATCY 2 cut(s) 503, 968
RsaI GTAC 2 cut(s) 314, 586
RsaNI GTAC 2 cut(s) 313, 585
SacII CCGCGG 1 cut(s) 409
SalI GTCGAC 1 cut(s) 325
SapI GCTCTTC 1 cut(s) 672
SaqAI TTAA 5 cut(s) 98, 279, 722, 813, 1084
Sau3AI GATC 4 cut(s) 15, 503, 875, 968
Sau96I GGNCC 7 cut(s) 42, 450, 456, 609, 627, 680, 749
SchI GAGTC 3 cut(s) 188, 332, 762
ScrFI CCNGG 7 cut(s) 13, 341, 342, 379, 454, 634, 800
SduI GDGCHC 4 cut(s) 64, 468, 667, 1047
SfaNI GCATC 1 cut(s) 562
Sfr274I CTCGAG 1 cut(s) 418
Sfr303I CCGCGG 1 cut(s) 409
SgrBI CCGCGG 1 cut(s) 409
SinI GGWCC 5 cut(s) 42, 450, 456, 609, 680
SlaI CTCGAG 1 cut(s) 418
SmaI CCCGGG 1 cut(s) 342
SmlI CTYRAG 2 cut(s) 152, 418
SmoI CTYRAG 2 cut(s) 152, 418
Sse9I AATT 1 cut(s) 808
SspI AATATT 1 cut(s) 950
SspMI CTAG 1 cut(s) 176
StyD4I CCNGG 7 cut(s) 11, 339, 340, 377, 452, 632, 798
StyI CCWWGG 2 cut(s) 231, 560
TaaI ACNGT 2 cut(s) 266, 331
TaiI ACGT 6 cut(s) 98, 659, 729, 763, 780, 798
TaqI TCGA 4 cut(s) 326, 419, 852, 878
TaqII GACCGA 1 cut(s) 597
TasI AATT 1 cut(s) 808
TauI GCSGC 7 cut(s) 385, 392, 408, 632, 677, 986, 1025
TfiI GAWTC 5 cut(s) 73, 211, 271, 299, 820
Tru1I TTAA 5 cut(s) 98, 279, 722, 813, 1084
Tru9I TTAA 5 cut(s) 98, 279, 722, 813, 1084
TscAI CASTG 4 cut(s) 38, 64, 271, 712
TseFI GTSAC 1 cut(s) 1074
TseI GCWGC 3 cut(s) 414, 477, 1013
Tsp45I GTSAC 1 cut(s) 1074
TspDTI ATGAA 1 cut(s) 277
TspGWI ACGGA 4 cut(s) 93, 300, 361, 516
TspMI CCCGGG 1 cut(s) 340
TspRI CASTG 4 cut(s) 38, 64, 271, 712
VpaK11BI GGWCC 5 cut(s) 42, 450, 456, 609, 680
XapI RAATTY 1 cut(s) 808
XhoI CTCGAG 1 cut(s) 418
XmaI CCCGGG 1 cut(s) 340
XmiI GTMKAC 2 cut(s) 256, 326
XspI CTAG 1 cut(s) 176
ZraI GACGTC 1 cut(s) 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.