Rroxscaffold_17G00435660

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000017
OG0000098
Physical Location & Seq
Forward (+)
250623 .. 252053
1431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_17G00435660.1

Sequence Viewer

Length: 930 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTTATCCCCGTGGTAACTTTTCGACACCTCTAGCTTTAAATTCCAAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGATGTGCCGCCCCGCCCAAACTCCCCACCCCCGACAATGTCTTCCCGCCGGATCAGCCCCGCCGAAGCGGTGCTTTGGGTCCAAAAAGAGGGCAGTGCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGACCGTTGAACGCCCCCGGGAAAGCCCCGAAGGAGCGTTCCCGTCCGTCCCCGGCCGGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGTCTGTTCACCTTTGGAGACCCGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCCGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGCCGAGCCGTTTCCGGGTGGGCAGGTGTTTAAACGAAAAGATAACTCTTCCCGAGGCCCCGCCGACGTCTCCGACTCCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGAATTTTAACCCGATTCCCTTTCGAAGTTCGCGCGAGACGCGCTATCGGACGGGGTTACCCGGCCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

309

Amino Acids

33.53

Weight (kDa)

11.56

Isoelectric Point (pI)

67.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 685
AatII GACGTC 1 cut(s) 741
Acc36I ACCTGC 2 cut(s) 516, 685
AccBSI CCGCTC 1 cut(s) 375
AccI GTMKAC 1 cut(s) 301
AccII CGCG 6 cut(s) 365, 384, 634, 817, 819, 826
AccIII TCCGGA 1 cut(s) 594
AclI AACGTT 1 cut(s) 756
AclWI GGATC 6 cut(s) 34, 136, 208, 475, 488, 865
AcoI YGGCCR 2 cut(s) 354, 653
AcsI RAATTY 2 cut(s) 109, 787
AcyI GRCGYC 1 cut(s) 738
AdeI CACNNNGTG 1 cut(s) 153
AfaI GTAC 2 cut(s) 289, 565
AfiI CCNNNNNNNGG 7 cut(s) 237, 261, 357, 658, 686, 778, 907
AgsI TTSAA 3 cut(s) 310, 604, 916
AhdI GACNNNNNGTC 1 cut(s) 526
AjiI CACGTC 2 cut(s) 638, 775
AluBI AGCT 2 cut(s) 104, 393
AluI AGCT 2 cut(s) 104, 393
Alw21I GWGCWC 1 cut(s) 648
Alw26I GTCTC 3 cut(s) 538, 745, 815
AlwI GGATC 6 cut(s) 34, 136, 208, 475, 488, 865
Ama87I CYCGRG 6 cut(s) 295, 317, 394, 469, 613, 723
Aor13HI TCCGGA 1 cut(s) 594
AoxI GGCC 7 cut(s) 136, 354, 607, 653, 727, 847, 909
ApeKI GCWGC 3 cut(s) 58, 390, 453
ApoI RAATTY 2 cut(s) 109, 787
AspLEI GCGC 3 cut(s) 620, 819, 828
AspS9I GGNCC 7 cut(s) 228, 426, 432, 589, 607, 661, 728
AsuHPI GGTGA 2 cut(s) 396, 527
AsuII TTCGAA 1 cut(s) 808
AvaI CYCGRG 6 cut(s) 295, 317, 394, 469, 613, 723
AvaII GGWCC 5 cut(s) 228, 426, 432, 589, 661
BaeGI GKGCMC 3 cut(s) 249, 363, 444
BamHI GGATCC 1 cut(s) 480
BbsI GAAGAC 1 cut(s) 182
Bbv12I GWGCWC 1 cut(s) 648
BbvI GCAGC 3 cut(s) 45, 402, 465
BceAI ACGGC 3 cut(s) 664, 746, 866
BcoDI GTCTC 3 cut(s) 538, 745, 815
BfaI CTAG 1 cut(s) 101
BfuAI ACCTGC 2 cut(s) 516, 685
BglI GCCNNNNNGGC 1 cut(s) 615
BisI GCNGC 9 cut(s) 59, 69, 157, 366, 382, 391, 454, 610, 656
BlsI GCNGC 9 cut(s) 60, 70, 158, 367, 383, 392, 455, 611, 657
Bme18I GGWCC 5 cut(s) 228, 426, 432, 589, 661
BmeRI GACNNNNNGTC 1 cut(s) 526
BmeT110I CYCGRG 6 cut(s) 295, 317, 394, 469, 613, 723
BmgBI CACGTC 2 cut(s) 638, 775
BmgT120I GGNCC 7 cut(s) 228, 426, 432, 589, 607, 661, 728
BmiI GGNNCC 8 cut(s) 229, 427, 433, 434, 482, 663, 730, 894
BmsI GCATC 1 cut(s) 541
BpiI GAAGAC 1 cut(s) 182
Bpu14I TTCGAA 1 cut(s) 808
Bsa29I ATCGAT 1 cut(s) 131
BsaHI GRCGYC 1 cut(s) 738
BsaI GGTCTC 1 cut(s) 538
BsaJI CCNNGG 8 cut(s) 79, 316, 317, 351, 382, 470, 613, 724
BsaWI WCCGGW 2 cut(s) 594, 622
BsaXI ACNNNNNCTCC 2 cut(s) 653, 683
Bsc4I CCNNNNNNNGG 7 cut(s) 237, 261, 357, 658, 686, 778, 907
BseAI TCCGGA 1 cut(s) 594
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 8 cut(s) 79, 316, 317, 351, 382, 470, 613, 724
BseLI CCNNNNNNNGG 7 cut(s) 237, 261, 357, 658, 686, 778, 907
BseSI GKGCMC 3 cut(s) 249, 363, 444
BseX3I CGGCCG 2 cut(s) 354, 653
BseXI GCAGC 3 cut(s) 45, 402, 465
BseYI CCCAGC 1 cut(s) 443
Bsh1236I CGCG 6 cut(s) 365, 384, 634, 817, 819, 826
Bsh1285I CGRYCG 4 cut(s) 305, 357, 570, 656
BshFI GGCC 7 cut(s) 138, 356, 609, 655, 729, 849, 911
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 4 cut(s) 305, 357, 570, 656
BsiHKAI GWGCWC 1 cut(s) 648
BsiHKCI CYCGRG 6 cut(s) 295, 317, 394, 469, 613, 723
BslFI GGGAC 4 cut(s) 334, 439, 445, 761
BslI CCNNNNNNNGG 7 cut(s) 237, 261, 357, 658, 686, 778, 907
BsmAI GTCTC 3 cut(s) 538, 745, 815
BsmBI CGTCTC 2 cut(s) 745, 815
BsmFI GGGAC 4 cut(s) 334, 439, 445, 761
BsnI GGCC 7 cut(s) 138, 356, 609, 655, 729, 849, 911
Bso31I GGTCTC 1 cut(s) 538
BsoBI CYCGRG 6 cut(s) 295, 317, 394, 469, 613, 723
Bsp119I TTCGAA 1 cut(s) 808
Bsp1286I GDGCHC 4 cut(s) 249, 363, 444, 648
Bsp13I TCCGGA 1 cut(s) 594
Bsp143I GATC 5 cut(s) 26, 128, 200, 480, 857
BspANI GGCC 7 cut(s) 138, 356, 609, 655, 729, 849, 911
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 594
BspFNI CGCG 6 cut(s) 365, 384, 634, 817, 819, 826
BspLI GGNNCC 8 cut(s) 229, 427, 433, 434, 482, 663, 730, 894
BspMI ACCTGC 2 cut(s) 516, 685
BspPI GGATC 6 cut(s) 34, 136, 208, 475, 488, 865
BspQI GCTCTTC 2 cut(s) 4, 653
BspT104I TTCGAA 1 cut(s) 808
BspTNI GGTCTC 1 cut(s) 538
BsrBI CCGCTC 1 cut(s) 375
BssECI CCNNGG 8 cut(s) 79, 316, 317, 351, 382, 470, 613, 724
BssMI GATC 5 cut(s) 26, 128, 200, 480, 857
BssNI GRCGYC 1 cut(s) 738
Bst4CI ACNGT 1 cut(s) 306
Bst6I CTCTTC 4 cut(s) 4, 653, 724, 910
BstACI GRCGYC 1 cut(s) 738
BstBI TTCGAA 1 cut(s) 808
BstC8I GCNNGC 2 cut(s) 249, 363
BstDEI CTNAG 1 cut(s) 853
BstDSI CCRYGG 2 cut(s) 79, 382
BstEII GGTNACC 1 cut(s) 840
BstFNI CGCG 6 cut(s) 365, 384, 634, 817, 819, 826
BstHHI GCGC 3 cut(s) 620, 819, 828
BstKTI GATC 5 cut(s) 29, 131, 203, 483, 860
BstMAI GTCTC 3 cut(s) 538, 745, 815
BstMBI GATC 5 cut(s) 26, 128, 200, 480, 857
BstMCI CGRYCG 4 cut(s) 305, 357, 570, 656
BstPI GGTNACC 1 cut(s) 840
BstSLI GKGCMC 3 cut(s) 249, 363, 444
BstUI CGCG 6 cut(s) 365, 384, 634, 817, 819, 826
BstV1I GCAGC 3 cut(s) 45, 402, 465
BstV2I GAAGAC 1 cut(s) 182
BstX2I RGATCY 1 cut(s) 480
BstYI RGATCY 1 cut(s) 480
BstZI CGGCCG 2 cut(s) 354, 653
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 7 cut(s) 138, 356, 609, 655, 729, 849, 911
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 2 cut(s) 79, 382
BtrI CACGTC 2 cut(s) 638, 775
BtsI GCAGTG 1 cut(s) 249
BtsIMutI CAGTG 1 cut(s) 249
BveI ACCTGC 2 cut(s) 516, 685
Cac8I GCNNGC 2 cut(s) 249, 363
CfoI GCGC 3 cut(s) 620, 819, 828
Cfr13I GGNCC 7 cut(s) 228, 426, 432, 589, 607, 661, 728
Cfr42I CCGCGG 1 cut(s) 385
Cfr9I CCCGGG 2 cut(s) 317, 613
ClaI ATCGAT 1 cut(s) 131
CseI GACGC 1 cut(s) 832
Csp6I GTAC 2 cut(s) 288, 564
CviAII CATG 2 cut(s) 870, 889
CviQI GTAC 2 cut(s) 288, 564
DdeI CTNAG 1 cut(s) 853
DpnI GATC 5 cut(s) 28, 130, 202, 482, 859
DpnII GATC 5 cut(s) 26, 128, 200, 480, 857
DraI TTTAAA 2 cut(s) 108, 703
DraIII CACNNNGTG 1 cut(s) 153
DriI GACNNNNNGTC 1 cut(s) 526
EaeI YGGCCR 2 cut(s) 354, 653
EagI CGGCCG 2 cut(s) 354, 653
Eam1104I CTCTTC 4 cut(s) 4, 653, 724, 910
Eam1105I GACNNNNNGTC 1 cut(s) 526
EarI CTCTTC 4 cut(s) 4, 653, 724, 910
EciI GGCGGA 1 cut(s) 661
EclXI CGGCCG 2 cut(s) 354, 653
Eco31I GGTCTC 1 cut(s) 538
Eco47I GGWCC 5 cut(s) 228, 426, 432, 589, 661
Eco52I CGGCCG 2 cut(s) 354, 653
Eco88I CYCGRG 6 cut(s) 295, 317, 394, 469, 613, 723
Eco91I GGTNACC 1 cut(s) 840
EcoO109I RGGNCCY 2 cut(s) 432, 728
EcoO65I GGTNACC 1 cut(s) 840
Esp3I CGTCTC 2 cut(s) 745, 815
FaeI CATG 2 cut(s) 873, 892
FaiI YATR 4 cut(s) 47, 560, 871, 890
FalI AAGNNNNNCTT 2 cut(s) 206, 238
FaqI GGGAC 4 cut(s) 334, 439, 445, 761
FatI CATG 2 cut(s) 869, 888
FauI CCCGC 6 cut(s) 169, 202, 216, 256, 380, 739
FblI GTMKAC 1 cut(s) 301
Fnu4HI GCNGC 9 cut(s) 59, 69, 157, 366, 382, 391, 454, 610, 656
Fsp4HI GCNGC 9 cut(s) 59, 69, 157, 366, 382, 391, 454, 610, 656
FspBI CTAG 1 cut(s) 101
GlaI GCGC 3 cut(s) 619, 818, 827
GluI GCNGC 9 cut(s) 59, 69, 157, 366, 382, 391, 454, 610, 656
GsaI CCCAGC 1 cut(s) 447
HaeIII GGCC 7 cut(s) 138, 356, 609, 655, 729, 849, 911
HgaI GACGC 1 cut(s) 832
HhaI GCGC 3 cut(s) 620, 819, 828
Hin1I GRCGYC 1 cut(s) 738
Hin1II CATG 2 cut(s) 873, 892
Hin6I GCGC 3 cut(s) 618, 817, 826
HinP1I GCGC 3 cut(s) 618, 817, 826
HincII GTYRAC 2 cut(s) 302, 766
HindII GTYRAC 2 cut(s) 302, 766
HinfI GANTC 5 cut(s) 257, 274, 298, 746, 799
HphI GGTGA 2 cut(s) 396, 527
Hpy166II GTNNAC 5 cut(s) 302, 404, 535, 766, 886
Hpy188I TCNGA 5 cut(s) 256, 273, 745, 786, 834
Hpy188III TCNNGA 5 cut(s) 148, 424, 469, 595, 723
Hpy8I GTNNAC 5 cut(s) 302, 404, 535, 766, 886
Hpy99I CGWCG 4 cut(s) 44, 419, 639, 740
HpyAV CCTTC 3 cut(s) 17, 325, 922
HpyCH4III ACNGT 1 cut(s) 306
HpyCH4IV ACGT 5 cut(s) 39, 637, 738, 756, 774
HpyCH4V TGCA 1 cut(s) 875
HpyF3I CTNAG 1 cut(s) 853
HpySE526I ACGT 5 cut(s) 39, 637, 738, 756, 774
Hsp92I GRCGYC 1 cut(s) 738
Hsp92II CATG 2 cut(s) 873, 892
HspAI GCGC 3 cut(s) 618, 817, 826
KflI GGGWCCC 1 cut(s) 432
Kpn2I TCCGGA 1 cut(s) 594
KspI CCGCGG 1 cut(s) 385
Kzo9I GATC 5 cut(s) 26, 128, 200, 480, 857
LguI GCTCTTC 2 cut(s) 4, 653
LmnI GCTCC 1 cut(s) 334
Lsp1109I GCAGC 3 cut(s) 45, 402, 465
LweI GCATC 1 cut(s) 541
MaeI CTAG 1 cut(s) 101
MaeII ACGT 5 cut(s) 39, 637, 738, 756, 774
MaeIII GTNAC 3 cut(s) 83, 474, 840
MalI GATC 5 cut(s) 28, 130, 202, 482, 859
MbiI CCGCTC 1 cut(s) 375
MboI GATC 5 cut(s) 26, 128, 200, 480, 857
MboII GAAGA 5 cut(s) 21, 182, 640, 711, 897
MflI RGATCY 1 cut(s) 480
MhlI GDGCHC 4 cut(s) 249, 363, 444, 648
MluCI AATT 2 cut(s) 109, 787
MlyI GAGTC 2 cut(s) 307, 740
MmeI TCCRAC 1 cut(s) 768
MroI TCCGGA 1 cut(s) 594
MseI TTAA 3 cut(s) 107, 702, 792
MspA1I CMGCKG 2 cut(s) 384, 658
MssI GTTTAAAC 1 cut(s) 703
MvnI CGCG 6 cut(s) 365, 384, 634, 817, 819, 826
NdeII GATC 5 cut(s) 26, 128, 200, 480, 857
NlaIII CATG 2 cut(s) 873, 892
NlaIV GGNNCC 8 cut(s) 229, 427, 433, 434, 482, 663, 730, 894
NmeAIII GCCGAG 1 cut(s) 700
NspV TTCGAA 1 cut(s) 808
PaeR7I CTCGAG 1 cut(s) 394
PaqCI CACCTGC 1 cut(s) 685
PciSI GCTCTTC 2 cut(s) 4, 653
PfeI GAWTC 3 cut(s) 257, 274, 799
PflFI GACNNNGTC 1 cut(s) 186
PkrI GCNGC 9 cut(s) 60, 70, 158, 367, 383, 392, 455, 611, 657
PleI GAGTC 2 cut(s) 306, 740
PmeI GTTTAAAC 1 cut(s) 703
PpsI GAGTC 2 cut(s) 306, 740
PpuMI RGGWCCY 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 756
Psp5II RGGWCCY 1 cut(s) 432
PspEI GGTNACC 1 cut(s) 840
PspFI CCCAGC 1 cut(s) 443
PspN4I GGNNCC 8 cut(s) 229, 427, 433, 434, 482, 663, 730, 894
PspPI GGNCC 7 cut(s) 228, 426, 432, 589, 607, 661, 728
PspPPI RGGWCCY 1 cut(s) 432
PspXI VCTCGAGB 1 cut(s) 394
PsuI RGATCY 1 cut(s) 480
PsyI GACNNNGTC 1 cut(s) 186
RsaI GTAC 2 cut(s) 289, 565
RsaNI GTAC 2 cut(s) 288, 564
SacII CCGCGG 1 cut(s) 385
SalI GTCGAC 1 cut(s) 300
SapI GCTCTTC 2 cut(s) 4, 653
SaqAI TTAA 3 cut(s) 107, 702, 792
SatI GCNGC 9 cut(s) 59, 69, 157, 366, 382, 391, 454, 610, 656
Sau3AI GATC 5 cut(s) 26, 128, 200, 480, 857
Sau96I GGNCC 7 cut(s) 228, 426, 432, 589, 607, 661, 728
SchI GAGTC 2 cut(s) 307, 740
SduI GDGCHC 4 cut(s) 249, 363, 444, 648
SfaNI GCATC 1 cut(s) 541
Sfr274I CTCGAG 1 cut(s) 394
Sfr303I CCGCGG 1 cut(s) 385
SfuI TTCGAA 1 cut(s) 808
SgrBI CCGCGG 1 cut(s) 385
SinI GGWCC 5 cut(s) 228, 426, 432, 589, 661
SlaI CTCGAG 1 cut(s) 394
SmaI CCCGGG 2 cut(s) 319, 615
SmlI CTYRAG 1 cut(s) 394
SmoI CTYRAG 1 cut(s) 394
SrfI GCCCGGGC 1 cut(s) 615
Sse9I AATT 2 cut(s) 109, 787
SspMI CTAG 1 cut(s) 101
TaaI ACNGT 1 cut(s) 306
TaiI ACGT 5 cut(s) 42, 640, 741, 759, 777
TaqI TCGA 7 cut(s) 21, 92, 131, 301, 395, 808, 860
TaqII GACCGA 1 cut(s) 577
TasI AATT 2 cut(s) 109, 787
TauI GCSGC 6 cut(s) 71, 159, 368, 384, 612, 658
TfiI GAWTC 3 cut(s) 257, 274, 799
Tru1I TTAA 3 cut(s) 107, 702, 792
Tru9I TTAA 3 cut(s) 107, 702, 792
TscAI CASTG 1 cut(s) 249
TseI GCWGC 3 cut(s) 58, 390, 453
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 275, 277, 336, 493
TspMI CCCGGG 2 cut(s) 317, 613
TspRI CASTG 1 cut(s) 249
Tth111I GACNNNGTC 1 cut(s) 186
VpaK11BI GGWCC 5 cut(s) 228, 426, 432, 589, 661
XapI RAATTY 2 cut(s) 109, 787
XhoI CTCGAG 1 cut(s) 394
XmaI CCCGGG 2 cut(s) 317, 613
XmiI GTMKAC 1 cut(s) 301
XspI CTAG 1 cut(s) 101
ZraI GACGTC 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.