Rroxscaffold_17G00435450

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000017
OG0000098
Physical Location & Seq
Forward (+)
72313 .. 73224
912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_17G00435450.1

Sequence Viewer

Length: 711 bp
ATGTCTTCCGCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

236

Amino Acids

24.93

Weight (kDa)

11.49

Isoelectric Point (pI)

70.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 650
AccBSI CCGCTC 1 cut(s) 372
AccI GTMKAC 2 cut(s) 256, 299
AccII CGCG 3 cut(s) 362, 381, 626
AccIII TCCGGA 1 cut(s) 587
AclI AACGTT 1 cut(s) 95
AclWI GGATC 3 cut(s) 22, 471, 484
AcoI YGGCCR 1 cut(s) 352
AfaI GTAC 2 cut(s) 286, 559
AfiI CCNNNNNNNGG 5 cut(s) 49, 361, 650, 663, 679
AgsI TTSAA 2 cut(s) 308, 597
AjiI CACGTC 1 cut(s) 630
AjnI CCWGG 1 cut(s) 678
AjuI GAANNNNNNNTTGG 2 cut(s) 19, 51
AluBI AGCT 2 cut(s) 186, 390
AluI AGCT 2 cut(s) 186, 390
Alw21I GWGCWC 1 cut(s) 640
Alw26I GTCTC 1 cut(s) 532
AlwI GGATC 3 cut(s) 22, 471, 484
AlwNI CAGNNNCTG 2 cut(s) 525, 650
Ama87I CYCGRG 2 cut(s) 391, 465
Aor13HI TCCGGA 1 cut(s) 587
AoxI GGCC 2 cut(s) 352, 600
ApeKI GCWGC 1 cut(s) 387
AspLEI GCGC 1 cut(s) 612
AspS9I GGNCC 5 cut(s) 40, 429, 582, 600, 653
AsuC2I CCSGG 3 cut(s) 314, 351, 607
AsuHPI GGTGA 2 cut(s) 393, 522
AvaI CYCGRG 2 cut(s) 391, 465
AvaII GGWCC 4 cut(s) 40, 429, 582, 653
BaeGI GKGCMC 2 cut(s) 62, 441
BamHI GGATCC 1 cut(s) 476
BbsI GAAGAC 1 cut(s) 189
Bbv12I GWGCWC 1 cut(s) 640
BbvI GCAGC 1 cut(s) 399
BceAI ACGGC 1 cut(s) 657
BciT130I CCWGG 1 cut(s) 680
BcnI CCSGG 3 cut(s) 314, 351, 607
BcoDI GTCTC 1 cut(s) 532
BfaI CTAG 1 cut(s) 176
BisI GCNGC 5 cut(s) 363, 379, 388, 603, 648
BlpI GCTNAGC 1 cut(s) 668
BlsI GCNGC 5 cut(s) 364, 380, 389, 604, 649
Bme1390I CCNGG 4 cut(s) 314, 351, 607, 680
Bme18I GGWCC 4 cut(s) 40, 429, 582, 653
BmeT110I CYCGRG 2 cut(s) 391, 465
BmgBI CACGTC 1 cut(s) 630
BmgT120I GGNCC 5 cut(s) 40, 429, 582, 600, 653
BmiI GGNNCC 6 cut(s) 41, 132, 430, 431, 478, 655
BmrFI CCNGG 4 cut(s) 314, 351, 607, 680
BmrI ACTGGG 2 cut(s) 334, 435
BmsI GCATC 1 cut(s) 535
BmuI ACTGGG 2 cut(s) 334, 435
BoxI GACNNNNGTC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 189
BplI GAGNNNNNCTC 2 cut(s) 170, 202
Bpu1102I GCTNAGC 1 cut(s) 668
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 3 cut(s) 314, 351, 607
BsaI GGTCTC 1 cut(s) 532
BsaJI CCNNGG 7 cut(s) 231, 313, 349, 379, 466, 533, 679
BsaWI WCCGGW 2 cut(s) 587, 614
BsaXI ACNNNNNCTCC 2 cut(s) 645, 675
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 361, 650, 663, 679
Bse118I RCCGGY 2 cut(s) 354, 563
Bse1I ACTGG 3 cut(s) 288, 340, 430
BseAI TCCGGA 1 cut(s) 587
BseBI CCWGG 1 cut(s) 680
BseDI CCNNGG 7 cut(s) 231, 313, 349, 379, 466, 533, 679
BseLI CCNNNNNNNGG 5 cut(s) 49, 361, 650, 663, 679
BseMII CTCAG 3 cut(s) 285, 461, 659
BseNI ACTGG 3 cut(s) 288, 340, 430
BseSI GKGCMC 2 cut(s) 62, 441
BseX3I CGGCCG 1 cut(s) 352
BseXI GCAGC 1 cut(s) 399
BseYI CCCAGC 1 cut(s) 440
Bsh1236I CGCG 3 cut(s) 362, 381, 626
Bsh1285I CGRYCG 2 cut(s) 355, 564
BshFI GGCC 2 cut(s) 354, 602
BsiEI CGRYCG 2 cut(s) 355, 564
BsiHKAI GWGCWC 1 cut(s) 640
BsiHKCI CYCGRG 2 cut(s) 391, 465
BsiSI CCGG 9 cut(s) 12, 313, 351, 355, 564, 588, 606, 615, 664
BslFI GGGAC 4 cut(s) 276, 332, 436, 442
BslI CCNNNNNNNGG 5 cut(s) 49, 361, 650, 663, 679
BsmAI GTCTC 1 cut(s) 532
BsmFI GGGAC 4 cut(s) 276, 332, 436, 442
BsnI GGCC 2 cut(s) 354, 602
Bso31I GGTCTC 1 cut(s) 532
BsoBI CYCGRG 2 cut(s) 391, 465
Bsp1286I GDGCHC 3 cut(s) 62, 441, 640
Bsp13I TCCGGA 1 cut(s) 587
Bsp143I GATC 2 cut(s) 14, 476
Bsp1720I GCTNAGC 1 cut(s) 668
BspANI GGCC 2 cut(s) 354, 602
BspCNI CTCAG 3 cut(s) 286, 460, 660
BspEI TCCGGA 1 cut(s) 587
BspFNI CGCG 3 cut(s) 362, 381, 626
BspLI GGNNCC 6 cut(s) 41, 132, 430, 431, 478, 655
BspPI GGATC 3 cut(s) 22, 471, 484
BspQI GCTCTTC 1 cut(s) 645
BspTNI GGTCTC 1 cut(s) 532
BsrBI CCGCTC 1 cut(s) 372
BsrFI RCCGGY 2 cut(s) 354, 563
BsrI ACTGG 3 cut(s) 288, 340, 430
BssAI RCCGGY 2 cut(s) 354, 563
BssECI CCNNGG 7 cut(s) 231, 313, 349, 379, 466, 533, 679
BssMI GATC 2 cut(s) 14, 476
BssT1I CCWWGG 2 cut(s) 231, 533
Bst2UI CCWGG 1 cut(s) 680
Bst4CI ACNGT 1 cut(s) 304
Bst6I CTCTTC 1 cut(s) 645
BstC8I GCNNGC 5 cut(s) 22, 32, 356, 360, 690
BstDEI CTNAG 3 cut(s) 294, 447, 668
BstDSI CCRYGG 1 cut(s) 379
BstFNI CGCG 3 cut(s) 362, 381, 626
BstHHI GCGC 1 cut(s) 612
BstKTI GATC 2 cut(s) 17, 479
BstMAI GTCTC 1 cut(s) 532
BstMBI GATC 2 cut(s) 14, 476
BstMCI CGRYCG 2 cut(s) 355, 564
BstMWI GCNNNNNNNGC 9 cut(s) 17, 215, 378, 384, 387, 393, 450, 573, 644
BstNI CCWGG 1 cut(s) 680
BstPAI GACNNNNGTC 1 cut(s) 178
BstSCI CCNGG 4 cut(s) 312, 349, 605, 678
BstSLI GKGCMC 2 cut(s) 62, 441
BstUI CGCG 3 cut(s) 362, 381, 626
BstV1I GCAGC 1 cut(s) 399
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 476
BstYI RGATCY 1 cut(s) 476
BstZI CGGCCG 1 cut(s) 352
BsuRI GGCC 2 cut(s) 354, 602
BtgI CCRYGG 1 cut(s) 379
BtrI CACGTC 1 cut(s) 630
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 1 cut(s) 62
Cac8I GCNNGC 5 cut(s) 22, 32, 356, 360, 690
CaiI CAGNNNCTG 2 cut(s) 525, 650
CfoI GCGC 1 cut(s) 612
Cfr10I RCCGGY 2 cut(s) 354, 563
Cfr13I GGNCC 5 cut(s) 40, 429, 582, 600, 653
Cfr42I CCGCGG 1 cut(s) 382
Csp6I GTAC 2 cut(s) 285, 558
CviQI GTAC 2 cut(s) 285, 558
DdeI CTNAG 3 cut(s) 294, 447, 668
DpnI GATC 2 cut(s) 16, 478
DpnII GATC 2 cut(s) 14, 476
EaeI YGGCCR 1 cut(s) 352
EagI CGGCCG 1 cut(s) 352
Eam1104I CTCTTC 1 cut(s) 645
EarI CTCTTC 1 cut(s) 645
EclXI CGGCCG 1 cut(s) 352
Eco130I CCWWGG 2 cut(s) 231, 533
Eco31I GGTCTC 1 cut(s) 532
Eco47I GGWCC 4 cut(s) 40, 429, 582, 653
Eco52I CGGCCG 1 cut(s) 352
Eco88I CYCGRG 2 cut(s) 391, 465
EcoO109I RGGNCCY 1 cut(s) 429
EcoRII CCWGG 1 cut(s) 678
EcoT14I CCWWGG 2 cut(s) 231, 533
ErhI CCWWGG 2 cut(s) 231, 533
FaiI YATR 2 cut(s) 141, 554
FaqI GGGAC 4 cut(s) 276, 332, 436, 442
FauI CCCGC 4 cut(s) 29, 70, 214, 377
FblI GTMKAC 2 cut(s) 256, 299
Fnu4HI GCNGC 5 cut(s) 363, 379, 388, 603, 648
Fsp4HI GCNGC 5 cut(s) 363, 379, 388, 603, 648
FspBI CTAG 1 cut(s) 176
GlaI GCGC 1 cut(s) 611
GluI GCNGC 5 cut(s) 363, 379, 388, 603, 648
GsaI CCCAGC 1 cut(s) 444
HaeIII GGCC 2 cut(s) 354, 602
HapII CCGG 9 cut(s) 12, 313, 351, 355, 564, 588, 606, 615, 664
HhaI GCGC 1 cut(s) 612
Hin6I GCGC 1 cut(s) 610
HinP1I GCGC 1 cut(s) 610
HincII GTYRAC 1 cut(s) 300
HindII GTYRAC 1 cut(s) 300
HinfI GANTC 5 cut(s) 71, 179, 212, 271, 296
HpaII CCGG 9 cut(s) 12, 313, 351, 355, 564, 588, 606, 615, 664
HphI GGTGA 2 cut(s) 393, 522
Hpy166II GTNNAC 4 cut(s) 257, 300, 401, 530
Hpy188I TCNGA 5 cut(s) 70, 173, 270, 295, 450
Hpy188III TCNNGA 3 cut(s) 421, 465, 588
Hpy8I GTNNAC 4 cut(s) 257, 300, 401, 530
Hpy99I CGWCG 2 cut(s) 416, 631
HpyAV CCTTC 2 cut(s) 121, 322
HpyCH4III ACNGT 1 cut(s) 304
HpyCH4IV ACGT 2 cut(s) 95, 629
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 215, 378, 384, 387, 393, 450, 573, 644
HpyF3I CTNAG 3 cut(s) 294, 447, 668
HpySE526I ACGT 2 cut(s) 95, 629
HspAI GCGC 1 cut(s) 610
KflI GGGWCCC 1 cut(s) 429
Kpn2I TCCGGA 1 cut(s) 587
KroI GCCGGC 1 cut(s) 354
KroNI GCCGGC 1 cut(s) 356
KspI CCGCGG 1 cut(s) 382
Kzo9I GATC 2 cut(s) 14, 476
LguI GCTCTTC 1 cut(s) 645
LmnI GCTCC 2 cut(s) 136, 331
Lsp1109I GCAGC 1 cut(s) 399
LweI GCATC 1 cut(s) 535
MaeI CTAG 1 cut(s) 176
MaeII ACGT 2 cut(s) 95, 629
MaeIII GTNAC 1 cut(s) 470
MalI GATC 2 cut(s) 16, 478
MbiI CCGCTC 1 cut(s) 372
MboI GATC 2 cut(s) 14, 476
MboII GAAGA 2 cut(s) 189, 632
MflI RGATCY 1 cut(s) 476
MhlI GDGCHC 3 cut(s) 62, 441, 640
MlyI GAGTC 2 cut(s) 188, 305
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 8 cut(s) 43, 76, 159, 456, 461, 515, 595, 671
MroI TCCGGA 1 cut(s) 587
MroNI GCCGGC 1 cut(s) 354
MseI TTAA 2 cut(s) 98, 696
MspA1I CMGCKG 3 cut(s) 209, 381, 650
MspI CCGG 9 cut(s) 12, 313, 351, 355, 564, 588, 606, 615, 664
MspR9I CCNGG 4 cut(s) 314, 351, 607, 680
MvaI CCWGG 1 cut(s) 680
MvnI CGCG 3 cut(s) 362, 381, 626
MwoI GCNNNNNNNGC 9 cut(s) 17, 215, 378, 384, 387, 393, 450, 573, 644
NaeI GCCGGC 1 cut(s) 356
NciI CCSGG 3 cut(s) 314, 351, 607
NdeII GATC 2 cut(s) 14, 476
NgoMIV GCCGGC 1 cut(s) 354
NlaIV GGNNCC 6 cut(s) 41, 132, 430, 431, 478, 655
PaeR7I CTCGAG 1 cut(s) 391
PciSI GCTCTTC 1 cut(s) 645
PdiI GCCGGC 1 cut(s) 356
PfeI GAWTC 3 cut(s) 71, 212, 271
PflMI CCANNNNNTGG 1 cut(s) 650
PkrI GCNGC 5 cut(s) 364, 380, 389, 604, 649
PleI GAGTC 2 cut(s) 187, 304
PpsI GAGTC 2 cut(s) 187, 304
PpuMI RGGWCCY 1 cut(s) 429
PshAI GACNNNNGTC 1 cut(s) 178
Psp1406I AACGTT 1 cut(s) 95
Psp5II RGGWCCY 1 cut(s) 429
Psp6I CCWGG 1 cut(s) 678
PspFI CCCAGC 1 cut(s) 440
PspGI CCWGG 1 cut(s) 678
PspN4I GGNNCC 6 cut(s) 41, 132, 430, 431, 478, 655
PspPI GGNCC 5 cut(s) 40, 429, 582, 600, 653
PspPPI RGGWCCY 1 cut(s) 429
PspXI VCTCGAGB 1 cut(s) 391
PstNI CAGNNNCTG 2 cut(s) 525, 650
PsuI RGATCY 1 cut(s) 476
RsaI GTAC 2 cut(s) 286, 559
RsaNI GTAC 2 cut(s) 285, 558
SacII CCGCGG 1 cut(s) 382
SalI GTCGAC 1 cut(s) 298
SapI GCTCTTC 1 cut(s) 645
SaqAI TTAA 2 cut(s) 98, 696
SatI GCNGC 5 cut(s) 363, 379, 388, 603, 648
Sau3AI GATC 2 cut(s) 14, 476
Sau96I GGNCC 5 cut(s) 40, 429, 582, 600, 653
SchI GAGTC 2 cut(s) 188, 305
ScrFI CCNGG 4 cut(s) 314, 351, 607, 680
SduI GDGCHC 3 cut(s) 62, 441, 640
SetI ASST 9 cut(s) 98, 151, 188, 392, 472, 535, 544, 632, 663
SfaNI GCATC 1 cut(s) 535
Sfr274I CTCGAG 1 cut(s) 391
Sfr303I CCGCGG 1 cut(s) 382
SgrBI CCGCGG 1 cut(s) 382
SinI GGWCC 4 cut(s) 40, 429, 582, 653
SlaI CTCGAG 1 cut(s) 391
SmlI CTYRAG 2 cut(s) 152, 391
SmoI CTYRAG 2 cut(s) 152, 391
SspMI CTAG 1 cut(s) 176
StyD4I CCNGG 4 cut(s) 312, 349, 605, 678
StyI CCWWGG 2 cut(s) 231, 533
TaaI ACNGT 1 cut(s) 304
TaiI ACGT 2 cut(s) 98, 632
TaqI TCGA 2 cut(s) 299, 392
TaqII GACCGA 1 cut(s) 570
TauI GCSGC 4 cut(s) 365, 381, 605, 650
TfiI GAWTC 3 cut(s) 71, 212, 271
Tru1I TTAA 2 cut(s) 98, 696
Tru9I TTAA 2 cut(s) 98, 696
TscAI CASTG 1 cut(s) 62
TseI GCWGC 1 cut(s) 387
TspGWI ACGGA 4 cut(s) 93, 272, 334, 489
TspRI CASTG 1 cut(s) 62
Van91I CCANNNNNTGG 1 cut(s) 650
VpaK11BI GGWCC 4 cut(s) 40, 429, 582, 653
XhoI CTCGAG 1 cut(s) 391
XmiI GTMKAC 2 cut(s) 256, 299
XspI CTAG 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.