Rroxscaffold_31G00438190

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000031
OG0000098
Physical Location & Seq
Forward (+)
127826 .. 128776
951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_31G00438190.1

Sequence Viewer

Length: 936 bp
ATGACGAGGCATTTGGCTACCTTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAACATCCGCAGGACCATCGCAATGCTTTTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTTCAAGGGGGCCGCCGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTTCCAGCCGCTGGACCCTACCTCCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCGGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGAAGTTCGCGCGAGACGCGCTATCGGACGGGGTTACCCGGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCGGGCTCACGCCCCGGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCGGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

311

Amino Acids

34.89

Weight (kDa)

11.54

Isoelectric Point (pI)

61.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 621
AccB7I CCANNNNNTGG 1 cut(s) 532
AccBSI CCGCTC 2 cut(s) 250, 848
AccI GTMKAC 1 cut(s) 178
AccII CGCG 8 cut(s) 58, 240, 259, 507, 697, 699, 706, 888
AccIII TCCGGA 1 cut(s) 465
AclI AACGTT 1 cut(s) 635
AclWI GGATC 3 cut(s) 348, 361, 745
AcoI YGGCCR 2 cut(s) 230, 843
AcsI RAATTY 2 cut(s) 68, 667
AcyI GRCGYC 1 cut(s) 618
AfaI GTAC 2 cut(s) 165, 436
AfiI CCNNNNNNNGG 8 cut(s) 61, 239, 532, 562, 657, 663, 927, 928
AgsI TTSAA 5 cut(s) 68, 187, 476, 795, 809
AjiI CACGTC 2 cut(s) 511, 654
AjnI CCWGG 2 cut(s) 561, 908
AluBI AGCT 1 cut(s) 268
AluI AGCT 1 cut(s) 268
Alw21I GWGCWC 2 cut(s) 95, 521
Alw26I GTCTC 4 cut(s) 409, 625, 695, 734
AlwI GGATC 3 cut(s) 348, 361, 745
AlwNI CAGNNNCTG 2 cut(s) 402, 532
Ama87I CYCGRG 5 cut(s) 269, 325, 342, 602, 866
Aor13HI TCCGGA 1 cut(s) 465
AoxI GGCC 6 cut(s) 230, 481, 606, 788, 843, 906
ApeKI GCWGC 2 cut(s) 265, 876
ApoI RAATTY 2 cut(s) 68, 667
ArsI GACNNNNNNTTYG 1 cut(s) 27
Asp700I GAANNNNTTC 1 cut(s) 72
AspLEI GCGC 5 cut(s) 60, 493, 699, 708, 890
AspS9I GGNCC 7 cut(s) 129, 307, 460, 481, 535, 607, 906
AsuHPI GGTGA 2 cut(s) 271, 399
AsuII TTCGAA 1 cut(s) 688
AvaI CYCGRG 5 cut(s) 269, 325, 342, 602, 866
AvaII GGWCC 4 cut(s) 129, 307, 460, 535
BaeGI GKGCMC 1 cut(s) 319
BamHI GGATCC 1 cut(s) 353
BanII GRGCYC 1 cut(s) 860
Bbv12I GWGCWC 2 cut(s) 95, 521
BbvI GCAGC 2 cut(s) 277, 888
BccI CCATC 1 cut(s) 140
BceAI ACGGC 5 cut(s) 32, 540, 625, 746, 858
BcgI CGANNNNNNTGC 2 cut(s) 115, 149
BciT130I CCWGG 2 cut(s) 563, 910
BcoDI GTCTC 4 cut(s) 409, 625, 695, 734
BglI GCCNNNNNGGC 1 cut(s) 925
BglII AGATCT 1 cut(s) 830
BisI GCNGC 8 cut(s) 241, 257, 266, 484, 530, 846, 877, 886
BlpI GCTNAGC 1 cut(s) 551
BlsI GCNGC 8 cut(s) 242, 258, 267, 485, 531, 847, 878, 887
Bme18I GGWCC 4 cut(s) 129, 307, 460, 535
BmeT110I CYCGRG 5 cut(s) 269, 325, 342, 602, 866
BmgBI CACGTC 2 cut(s) 511, 654
BmgT120I GGNCC 7 cut(s) 129, 307, 460, 481, 535, 607, 906
BmiI GGNNCC 8 cut(s) 308, 309, 355, 482, 537, 609, 774, 907
BmrI ACTGGG 3 cut(s) 105, 212, 313
BmsI GCATC 1 cut(s) 412
BmuI ACTGGG 3 cut(s) 105, 212, 313
Bpu1102I GCTNAGC 1 cut(s) 551
Bpu14I TTCGAA 1 cut(s) 688
BsaHI GRCGYC 1 cut(s) 618
BsaI GGTCTC 2 cut(s) 409, 734
BsaJI CCNNGG 8 cut(s) 227, 257, 343, 410, 562, 603, 865, 866
BsaWI WCCGGW 2 cut(s) 465, 495
BsaXI ACNNNNNCTCC 4 cut(s) 527, 557, 832, 862
Bsc4I CCNNNNNNNGG 8 cut(s) 61, 239, 532, 562, 657, 663, 927, 928
Bse118I RCCGGY 1 cut(s) 232
Bse1I ACTGG 4 cut(s) 100, 167, 218, 308
Bse3DI GCAATG 2 cut(s) 109, 144
BseAI TCCGGA 1 cut(s) 465
BseBI CCWGG 2 cut(s) 563, 910
BseDI CCNNGG 8 cut(s) 227, 257, 343, 410, 562, 603, 865, 866
BseGI GGATG 1 cut(s) 120
BseLI CCNNNNNNNGG 8 cut(s) 61, 239, 532, 562, 657, 663, 927, 928
BseMI GCAATG 2 cut(s) 109, 144
BseMII CTCAG 2 cut(s) 164, 542
BseNI ACTGG 4 cut(s) 100, 167, 218, 308
BseSI GKGCMC 1 cut(s) 319
BseX3I CGGCCG 2 cut(s) 230, 843
BseXI GCAGC 2 cut(s) 277, 888
BseYI CCCAGC 1 cut(s) 318
BsgI GTGCAG 1 cut(s) 819
Bsh1236I CGCG 8 cut(s) 58, 240, 259, 507, 697, 699, 706, 888
Bsh1285I CGRYCG 4 cut(s) 233, 441, 846, 883
BshFI GGCC 6 cut(s) 232, 483, 608, 790, 845, 908
BsiEI CGRYCG 4 cut(s) 233, 441, 846, 883
BsiHKAI GWGCWC 2 cut(s) 95, 521
BsiHKCI CYCGRG 5 cut(s) 269, 325, 342, 602, 866
BslFI GGGAC 4 cut(s) 210, 314, 320, 640
BslI CCNNNNNNNGG 8 cut(s) 61, 239, 532, 562, 657, 663, 927, 928
BsmAI GTCTC 4 cut(s) 409, 625, 695, 734
BsmBI CGTCTC 2 cut(s) 625, 695
BsmFI GGGAC 4 cut(s) 210, 314, 320, 640
BsnI GGCC 6 cut(s) 232, 483, 608, 790, 845, 908
Bso31I GGTCTC 2 cut(s) 409, 734
BsoBI CYCGRG 5 cut(s) 269, 325, 342, 602, 866
Bsp119I TTCGAA 1 cut(s) 688
Bsp1286I GDGCHC 4 cut(s) 95, 319, 521, 860
Bsp13I TCCGGA 1 cut(s) 465
Bsp143I GATC 3 cut(s) 353, 737, 830
Bsp1720I GCTNAGC 1 cut(s) 551
BspANI GGCC 6 cut(s) 232, 483, 608, 790, 845, 908
BspCNI CTCAG 2 cut(s) 165, 543
BspEI TCCGGA 1 cut(s) 465
BspFNI CGCG 8 cut(s) 58, 240, 259, 507, 697, 699, 706, 888
BspLI GGNNCC 8 cut(s) 308, 309, 355, 482, 537, 609, 774, 907
BspPI GGATC 3 cut(s) 348, 361, 745
BspT104I TTCGAA 1 cut(s) 688
BspTNI GGTCTC 2 cut(s) 409, 734
BsrBI CCGCTC 2 cut(s) 250, 848
BsrDI GCAATG 2 cut(s) 109, 144
BsrFI RCCGGY 1 cut(s) 232
BsrI ACTGG 4 cut(s) 100, 167, 218, 308
BssAI RCCGGY 1 cut(s) 232
BssECI CCNNGG 8 cut(s) 227, 257, 343, 410, 562, 603, 865, 866
BssMI GATC 3 cut(s) 353, 737, 830
BssNI GRCGYC 1 cut(s) 618
BssT1I CCWWGG 1 cut(s) 410
Bst2UI CCWGG 2 cut(s) 563, 910
Bst4CI ACNGT 1 cut(s) 183
Bst6I CTCTTC 2 cut(s) 603, 789
BstACI GRCGYC 1 cut(s) 618
BstBI TTCGAA 1 cut(s) 688
BstC8I GCNNGC 3 cut(s) 234, 238, 573
BstDEI CTNAG 3 cut(s) 173, 551, 733
BstDSI CCRYGG 1 cut(s) 257
BstEII GGTNACC 1 cut(s) 720
BstF5I GGATG 1 cut(s) 120
BstFNI CGCG 8 cut(s) 58, 240, 259, 507, 697, 699, 706, 888
BstHHI GCGC 5 cut(s) 60, 493, 699, 708, 890
BstKTI GATC 3 cut(s) 356, 740, 833
BstMAI GTCTC 4 cut(s) 409, 625, 695, 734
BstMBI GATC 3 cut(s) 353, 737, 830
BstMCI CGRYCG 4 cut(s) 233, 441, 846, 883
BstNI CCWGG 2 cut(s) 563, 910
BstPI GGTNACC 1 cut(s) 720
BstSLI GKGCMC 1 cut(s) 319
BstUI CGCG 8 cut(s) 58, 240, 259, 507, 697, 699, 706, 888
BstV1I GCAGC 2 cut(s) 277, 888
BstX2I RGATCY 2 cut(s) 353, 830
BstYI RGATCY 2 cut(s) 353, 830
BstZI CGGCCG 2 cut(s) 230, 843
BsuRI GGCC 6 cut(s) 232, 483, 608, 790, 845, 908
BtgI CCRYGG 1 cut(s) 257
BtgZI GCGATG 1 cut(s) 118
BtrI CACGTC 2 cut(s) 511, 654
BtsCI GGATG 1 cut(s) 120
BtsIMutI CAGTG 1 cut(s) 93
Cac8I GCNNGC 3 cut(s) 234, 238, 573
CaiI CAGNNNCTG 2 cut(s) 402, 532
CfoI GCGC 5 cut(s) 60, 493, 699, 708, 890
Cfr10I RCCGGY 1 cut(s) 232
Cfr13I GGNCC 7 cut(s) 129, 307, 460, 481, 535, 607, 906
Cfr42I CCGCGG 1 cut(s) 260
Cfr9I CCCGGG 1 cut(s) 866
CseI GACGC 1 cut(s) 712
Csp6I GTAC 2 cut(s) 164, 435
CviAII CATG 2 cut(s) 750, 769
CviQI GTAC 2 cut(s) 164, 435
DdeI CTNAG 3 cut(s) 173, 551, 733
DpnI GATC 3 cut(s) 355, 739, 832
DpnII GATC 3 cut(s) 353, 737, 830
EaeI YGGCCR 2 cut(s) 230, 843
EagI CGGCCG 2 cut(s) 230, 843
Eam1104I CTCTTC 2 cut(s) 603, 789
EarI CTCTTC 2 cut(s) 603, 789
EciI GGCGGA 1 cut(s) 840
EclXI CGGCCG 2 cut(s) 230, 843
Eco130I CCWWGG 1 cut(s) 410
Eco24I GRGCYC 1 cut(s) 860
Eco31I GGTCTC 2 cut(s) 409, 734
Eco47I GGWCC 4 cut(s) 129, 307, 460, 535
Eco52I CGGCCG 2 cut(s) 230, 843
Eco88I CYCGRG 5 cut(s) 269, 325, 342, 602, 866
Eco91I GGTNACC 1 cut(s) 720
EcoO109I RGGNCCY 3 cut(s) 307, 607, 906
EcoO65I GGTNACC 1 cut(s) 720
EcoRII CCWGG 2 cut(s) 561, 908
EcoT14I CCWWGG 1 cut(s) 410
EcoT38I GRGCYC 1 cut(s) 860
ErhI CCWWGG 1 cut(s) 410
Esp3I CGTCTC 2 cut(s) 625, 695
FaeI CATG 2 cut(s) 753, 772
FaiI YATR 5 cut(s) 35, 431, 751, 770, 934
FaqI GGGAC 4 cut(s) 210, 314, 320, 640
FatI CATG 2 cut(s) 749, 768
FauI CCCGC 5 cut(s) 52, 63, 255, 619, 921
FblI GTMKAC 1 cut(s) 178
Fnu4HI GCNGC 8 cut(s) 241, 257, 266, 484, 530, 846, 877, 886
FokI GGATG 1 cut(s) 107
FriOI GRGCYC 1 cut(s) 860
Fsp4HI GCNGC 8 cut(s) 241, 257, 266, 484, 530, 846, 877, 886
GlaI GCGC 5 cut(s) 59, 492, 698, 707, 889
GluI GCNGC 8 cut(s) 241, 257, 266, 484, 530, 846, 877, 886
GsaI CCCAGC 1 cut(s) 322
HaeIII GGCC 6 cut(s) 232, 483, 608, 790, 845, 908
HgaI GACGC 1 cut(s) 712
HhaI GCGC 5 cut(s) 60, 493, 699, 708, 890
Hin1I GRCGYC 1 cut(s) 618
Hin1II CATG 2 cut(s) 753, 772
Hin6I GCGC 5 cut(s) 58, 491, 697, 706, 888
HinP1I GCGC 5 cut(s) 58, 491, 697, 706, 888
HincII GTYRAC 3 cut(s) 118, 179, 645
HindII GTYRAC 3 cut(s) 118, 179, 645
HinfI GANTC 5 cut(s) 30, 150, 175, 626, 679
HpaI GTTAAC 1 cut(s) 118
HphI GGTGA 2 cut(s) 271, 399
Hpy166II GTNNAC 7 cut(s) 52, 118, 179, 279, 407, 645, 766
Hpy188I TCNGA 5 cut(s) 90, 149, 174, 625, 714
Hpy188III TCNNGA 5 cut(s) 299, 342, 466, 602, 664
Hpy8I GTNNAC 7 cut(s) 52, 118, 179, 279, 407, 645, 766
Hpy99I CGWCG 5 cut(s) 294, 512, 620, 844, 927
HpyAV CCTTC 2 cut(s) 200, 801
HpyCH4III ACNGT 1 cut(s) 183
HpyCH4IV ACGT 4 cut(s) 510, 618, 635, 653
HpyCH4V TGCA 3 cut(s) 755, 836, 876
HpyF3I CTNAG 3 cut(s) 173, 551, 733
HpySE526I ACGT 4 cut(s) 510, 618, 635, 653
Hsp92I GRCGYC 1 cut(s) 618
Hsp92II CATG 2 cut(s) 753, 772
HspAI GCGC 5 cut(s) 58, 491, 697, 706, 888
KflI GGGWCCC 1 cut(s) 307
Kpn2I TCCGGA 1 cut(s) 465
KroI GCCGGC 1 cut(s) 232
KroNI GCCGGC 1 cut(s) 234
KspAI GTTAAC 1 cut(s) 118
KspI CCGCGG 1 cut(s) 260
Kzo9I GATC 3 cut(s) 353, 737, 830
LmnI GCTCC 2 cut(s) 209, 853
Lsp1109I GCAGC 2 cut(s) 277, 888
LweI GCATC 1 cut(s) 412
MaeII ACGT 4 cut(s) 510, 618, 635, 653
MaeIII GTNAC 3 cut(s) 37, 347, 720
MalI GATC 3 cut(s) 355, 739, 832
MbiI CCGCTC 2 cut(s) 250, 848
MboI GATC 3 cut(s) 353, 737, 830
MboII GAAGA 3 cut(s) 65, 590, 776
MflI RGATCY 2 cut(s) 353, 830
MhlI GDGCHC 4 cut(s) 95, 319, 521, 860
MluCI AATT 2 cut(s) 68, 667
MlyI GAGTC 3 cut(s) 39, 184, 620
MnlI CCTC 8 cut(s) 334, 338, 392, 473, 553, 598, 792, 902
MroI TCCGGA 1 cut(s) 465
MroNI GCCGGC 1 cut(s) 232
MroXI GAANNNNTTC 1 cut(s) 72
MseI TTAA 4 cut(s) 24, 117, 579, 672
MslI CAYNNNNRTG 1 cut(s) 137
MspA1I CMGCKG 2 cut(s) 259, 532
MvaI CCWGG 2 cut(s) 563, 910
MvnI CGCG 8 cut(s) 58, 240, 259, 507, 697, 699, 706, 888
NaeI GCCGGC 1 cut(s) 234
NdeII GATC 3 cut(s) 353, 737, 830
NgoMIV GCCGGC 1 cut(s) 232
NlaIII CATG 2 cut(s) 753, 772
NlaIV GGNNCC 8 cut(s) 308, 309, 355, 482, 537, 609, 774, 907
NspV TTCGAA 1 cut(s) 688
PaeR7I CTCGAG 2 cut(s) 269, 325
PdiI GCCGGC 1 cut(s) 234
PdmI GAANNNNTTC 1 cut(s) 72
PfeI GAWTC 2 cut(s) 150, 679
PflMI CCANNNNNTGG 1 cut(s) 532
PkrI GCNGC 8 cut(s) 242, 258, 267, 485, 531, 847, 878, 887
PleI GAGTC 3 cut(s) 38, 183, 620
PpsI GAGTC 3 cut(s) 38, 183, 620
PpuMI RGGWCCY 1 cut(s) 307
Psp1406I AACGTT 1 cut(s) 635
Psp5II RGGWCCY 1 cut(s) 307
Psp6I CCWGG 2 cut(s) 561, 908
PspEI GGTNACC 1 cut(s) 720
PspFI CCCAGC 1 cut(s) 318
PspGI CCWGG 2 cut(s) 561, 908
PspN4I GGNNCC 8 cut(s) 308, 309, 355, 482, 537, 609, 774, 907
PspPI GGNCC 7 cut(s) 129, 307, 460, 481, 535, 607, 906
PspPPI RGGWCCY 1 cut(s) 307
PspXI VCTCGAGB 2 cut(s) 269, 325
PstNI CAGNNNCTG 2 cut(s) 402, 532
PsuI RGATCY 2 cut(s) 353, 830
RsaI GTAC 2 cut(s) 165, 436
RsaNI GTAC 2 cut(s) 164, 435
RseI CAYNNNNRTG 1 cut(s) 137
SacII CCGCGG 1 cut(s) 260
SalI GTCGAC 1 cut(s) 177
SaqAI TTAA 4 cut(s) 24, 117, 579, 672
SatI GCNGC 8 cut(s) 241, 257, 266, 484, 530, 846, 877, 886
Sau3AI GATC 3 cut(s) 353, 737, 830
Sau96I GGNCC 7 cut(s) 129, 307, 460, 481, 535, 607, 906
SchI GAGTC 3 cut(s) 39, 184, 620
SduI GDGCHC 4 cut(s) 95, 319, 521, 860
SfaNI GCATC 1 cut(s) 412
Sfr274I CTCGAG 2 cut(s) 269, 325
Sfr303I CCGCGG 1 cut(s) 260
SfuI TTCGAA 1 cut(s) 688
SgrBI CCGCGG 1 cut(s) 260
SinI GGWCC 4 cut(s) 129, 307, 460, 535
SlaI CTCGAG 2 cut(s) 269, 325
SmaI CCCGGG 1 cut(s) 868
SmiMI CAYNNNNRTG 1 cut(s) 137
SmlI CTYRAG 2 cut(s) 269, 325
SmoI CTYRAG 2 cut(s) 269, 325
Sse9I AATT 2 cut(s) 68, 667
SspI AATATT 1 cut(s) 812
StyI CCWWGG 1 cut(s) 410
TaaI ACNGT 1 cut(s) 183
TaiI ACGT 4 cut(s) 513, 621, 638, 656
TaqI TCGA 5 cut(s) 178, 270, 326, 688, 740
TaqII GACCGA 1 cut(s) 448
TasI AATT 2 cut(s) 68, 667
TauI GCSGC 6 cut(s) 243, 259, 486, 532, 848, 888
TfiI GAWTC 2 cut(s) 150, 679
Tru1I TTAA 4 cut(s) 24, 117, 579, 672
Tru9I TTAA 4 cut(s) 24, 117, 579, 672
TscAI CASTG 1 cut(s) 100
TseI GCWGC 2 cut(s) 265, 876
TspGWI ACGGA 3 cut(s) 151, 212, 366
TspMI CCCGGG 1 cut(s) 866
TspRI CASTG 1 cut(s) 100
Van91I CCANNNNNTGG 1 cut(s) 532
VpaK11BI GGWCC 4 cut(s) 129, 307, 460, 535
XapI RAATTY 2 cut(s) 68, 667
XhoI CTCGAG 2 cut(s) 269, 325
XmaI CCCGGG 1 cut(s) 866
XmiI GTMKAC 1 cut(s) 178
XmnI GAANNNNTTC 1 cut(s) 72
ZraI GACGTC 1 cut(s) 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.