Rroxscaffold_97G00442390

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000097
OG0000098
Physical Location & Seq
Forward (+)
108200 .. 109255
1056 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_97G00442390.1

Sequence Viewer

Length: 675 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGCCCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGGCTGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCAGGTGGGCAGGCTGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGTTCGGAATTTTAACCCGATTCCCTTTTCGGTGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGCCTCTTAGGATCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

224

Amino Acids

25.49

Weight (kDa)

11.53

Isoelectric Point (pI)

82.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 553
AccBSI CCGCTC 1 cut(s) 190
AccI GTMKAC 1 cut(s) 116
AccII CGCG 6 cut(s) 180, 199, 444, 628, 630, 637
AccIII TCCGGA 1 cut(s) 405
AclI AACGTT 1 cut(s) 567
AclWI GGATC 4 cut(s) 23, 288, 301, 674
AcoI YGGCCR 2 cut(s) 170, 483
AcsI RAATTY 1 cut(s) 597
AcyI GRCGYC 1 cut(s) 550
AfaI GTAC 2 cut(s) 103, 377
AfiI CCNNNNNNNGG 8 cut(s) 49, 75, 168, 172, 179, 468, 481, 497
AgsI TTSAA 2 cut(s) 125, 415
AjiI CACGTC 2 cut(s) 448, 586
AjnI CCWGG 1 cut(s) 496
AluBI AGCT 2 cut(s) 34, 208
AluI AGCT 2 cut(s) 34, 208
Alw21I GWGCWC 1 cut(s) 458
Alw26I GTCTC 3 cut(s) 350, 557, 626
AlwI GGATC 4 cut(s) 23, 288, 301, 674
Ama87I CYCGRG 5 cut(s) 110, 130, 209, 282, 534
Aor13HI TCCGGA 1 cut(s) 405
AoxI GGCC 4 cut(s) 170, 418, 483, 538
ApeKI GCWGC 3 cut(s) 31, 205, 267
ApoI RAATTY 1 cut(s) 597
AspLEI GCGC 3 cut(s) 431, 630, 639
AspS9I GGNCC 7 cut(s) 40, 240, 246, 400, 418, 471, 539
AsuC2I CCSGG 6 cut(s) 13, 131, 132, 169, 244, 425
AsuHPI GGTGA 2 cut(s) 211, 340
AvaI CYCGRG 5 cut(s) 110, 130, 209, 282, 534
AvaII GGWCC 5 cut(s) 40, 240, 246, 400, 471
BaeGI GKGCMC 2 cut(s) 62, 258
BamHI GGATCC 1 cut(s) 293
Bbv12I GWGCWC 1 cut(s) 458
BbvI GCAGC 3 cut(s) 43, 217, 279
BceAI ACGGC 2 cut(s) 475, 557
BciT130I CCWGG 1 cut(s) 498
BcnI CCSGG 6 cut(s) 13, 131, 132, 169, 244, 425
BcoDI GTCTC 3 cut(s) 350, 557, 626
BglI GCCNNNNNGGC 1 cut(s) 426
BisI GCNGC 7 cut(s) 32, 181, 197, 206, 268, 421, 466
BlsI GCNGC 7 cut(s) 33, 182, 198, 207, 269, 422, 467
Bme1390I CCNGG 7 cut(s) 13, 131, 132, 169, 244, 425, 498
Bme18I GGWCC 5 cut(s) 40, 240, 246, 400, 471
BmeT110I CYCGRG 5 cut(s) 110, 130, 209, 282, 534
BmgBI CACGTC 2 cut(s) 448, 586
BmgT120I GGNCC 7 cut(s) 40, 240, 246, 400, 418, 471, 539
BmiI GGNNCC 6 cut(s) 41, 247, 248, 295, 473, 541
BmrFI CCNGG 7 cut(s) 13, 131, 132, 169, 244, 425, 498
BmrI ACTGGG 1 cut(s) 151
BmsI GCATC 1 cut(s) 353
BmuI ACTGGG 1 cut(s) 151
BpuMI CCSGG 6 cut(s) 13, 131, 132, 169, 244, 425
BsaHI GRCGYC 1 cut(s) 550
BsaI GGTCTC 1 cut(s) 350
BsaJI CCNNGG 7 cut(s) 130, 167, 197, 283, 351, 424, 535
BsaWI WCCGGW 1 cut(s) 405
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 8 cut(s) 49, 75, 168, 172, 179, 468, 481, 497
Bse118I RCCGGY 2 cut(s) 172, 381
Bse1I ACTGG 1 cut(s) 157
BseAI TCCGGA 1 cut(s) 405
BseBI CCWGG 1 cut(s) 498
BseDI CCNNGG 7 cut(s) 130, 167, 197, 283, 351, 424, 535
BseLI CCNNNNNNNGG 8 cut(s) 49, 75, 168, 172, 179, 468, 481, 497
BseNI ACTGG 1 cut(s) 157
BseSI GKGCMC 2 cut(s) 62, 258
BseX3I CGGCCG 2 cut(s) 170, 483
BseXI GCAGC 3 cut(s) 43, 217, 279
BseYI CCCAGC 1 cut(s) 257
Bsh1236I CGCG 6 cut(s) 180, 199, 444, 628, 630, 637
Bsh1285I CGRYCG 4 cut(s) 120, 173, 382, 486
BshFI GGCC 4 cut(s) 172, 420, 485, 540
BsiEI CGRYCG 4 cut(s) 120, 173, 382, 486
BsiHKAI GWGCWC 1 cut(s) 458
BsiHKCI CYCGRG 5 cut(s) 110, 130, 209, 282, 534
BslFI GGGAC 3 cut(s) 149, 259, 572
BslI CCNNNNNNNGG 8 cut(s) 49, 75, 168, 172, 179, 468, 481, 497
BsmAI GTCTC 3 cut(s) 350, 557, 626
BsmBI CGTCTC 2 cut(s) 557, 626
BsmFI GGGAC 3 cut(s) 149, 259, 572
BsnI GGCC 4 cut(s) 172, 420, 485, 540
Bso31I GGTCTC 1 cut(s) 350
BsoBI CYCGRG 5 cut(s) 110, 130, 209, 282, 534
Bsp1286I GDGCHC 3 cut(s) 62, 258, 458
Bsp13I TCCGGA 1 cut(s) 405
Bsp143I GATC 3 cut(s) 15, 293, 666
BspANI GGCC 4 cut(s) 172, 420, 485, 540
BspEI TCCGGA 1 cut(s) 405
BspFNI CGCG 6 cut(s) 180, 199, 444, 628, 630, 637
BspLI GGNNCC 6 cut(s) 41, 247, 248, 295, 473, 541
BspPI GGATC 4 cut(s) 23, 288, 301, 674
BspQI GCTCTTC 1 cut(s) 463
BspTNI GGTCTC 1 cut(s) 350
BsrBI CCGCTC 1 cut(s) 190
BsrFI RCCGGY 2 cut(s) 172, 381
BsrI ACTGG 1 cut(s) 157
BssAI RCCGGY 2 cut(s) 172, 381
BssECI CCNNGG 7 cut(s) 130, 167, 197, 283, 351, 424, 535
BssMI GATC 3 cut(s) 15, 293, 666
BssNI GRCGYC 1 cut(s) 550
BssT1I CCWWGG 1 cut(s) 351
Bst2UI CCWGG 1 cut(s) 498
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 2 cut(s) 463, 535
BstACI GRCGYC 1 cut(s) 550
BstC8I GCNNGC 4 cut(s) 23, 174, 178, 507
BstDEI CTNAG 1 cut(s) 662
BstDSI CCRYGG 1 cut(s) 197
BstEII GGTNACC 1 cut(s) 650
BstFNI CGCG 6 cut(s) 180, 199, 444, 628, 630, 637
BstHHI GCGC 3 cut(s) 431, 630, 639
BstKTI GATC 3 cut(s) 18, 296, 669
BstMAI GTCTC 3 cut(s) 350, 557, 626
BstMBI GATC 3 cut(s) 15, 293, 666
BstMCI CGRYCG 4 cut(s) 120, 173, 382, 486
BstNI CCWGG 1 cut(s) 498
BstPI GGTNACC 1 cut(s) 650
BstSCI CCNGG 7 cut(s) 11, 129, 130, 167, 242, 423, 496
BstSLI GKGCMC 2 cut(s) 62, 258
BstUI CGCG 6 cut(s) 180, 199, 444, 628, 630, 637
BstV1I GCAGC 3 cut(s) 43, 217, 279
BstX2I RGATCY 1 cut(s) 293
BstYI RGATCY 1 cut(s) 293
BstZI CGGCCG 2 cut(s) 170, 483
BsuRI GGCC 4 cut(s) 172, 420, 485, 540
BtgI CCRYGG 1 cut(s) 197
BtrI CACGTC 2 cut(s) 448, 586
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 1 cut(s) 62
Cac8I GCNNGC 4 cut(s) 23, 174, 178, 507
CfoI GCGC 3 cut(s) 431, 630, 639
Cfr10I RCCGGY 2 cut(s) 172, 381
Cfr13I GGNCC 7 cut(s) 40, 240, 246, 400, 418, 471, 539
Cfr42I CCGCGG 1 cut(s) 200
Cfr9I CCCGGG 1 cut(s) 130
CpoI CGGWCCG 1 cut(s) 240
CseI GACGC 1 cut(s) 643
Csp6I GTAC 2 cut(s) 102, 376
CspI CGGWCCG 1 cut(s) 240
CviQI GTAC 2 cut(s) 102, 376
DdeI CTNAG 1 cut(s) 662
DpnI GATC 3 cut(s) 17, 295, 668
DpnII GATC 3 cut(s) 15, 293, 666
EaeI YGGCCR 2 cut(s) 170, 483
EagI CGGCCG 2 cut(s) 170, 483
Eam1104I CTCTTC 2 cut(s) 463, 535
EarI CTCTTC 2 cut(s) 463, 535
EclXI CGGCCG 2 cut(s) 170, 483
Eco130I CCWWGG 1 cut(s) 351
Eco31I GGTCTC 1 cut(s) 350
Eco47I GGWCC 5 cut(s) 40, 240, 246, 400, 471
Eco52I CGGCCG 2 cut(s) 170, 483
Eco88I CYCGRG 5 cut(s) 110, 130, 209, 282, 534
Eco91I GGTNACC 1 cut(s) 650
EcoO109I RGGNCCY 2 cut(s) 246, 539
EcoO65I GGTNACC 1 cut(s) 650
EcoRII CCWGG 1 cut(s) 496
EcoT14I CCWWGG 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 351
Esp3I CGTCTC 2 cut(s) 557, 626
FaiI YATR 1 cut(s) 372
FaqI GGGAC 3 cut(s) 149, 259, 572
FauI CCCGC 5 cut(s) 30, 70, 195, 551, 663
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 7 cut(s) 32, 181, 197, 206, 268, 421, 466
Fsp4HI GCNGC 7 cut(s) 32, 181, 197, 206, 268, 421, 466
GlaI GCGC 3 cut(s) 430, 629, 638
GluI GCNGC 7 cut(s) 32, 181, 197, 206, 268, 421, 466
GsaI CCCAGC 1 cut(s) 261
HaeIII GGCC 4 cut(s) 172, 420, 485, 540
HgaI GACGC 1 cut(s) 643
HhaI GCGC 3 cut(s) 431, 630, 639
Hin1I GRCGYC 1 cut(s) 550
Hin6I GCGC 3 cut(s) 429, 628, 637
HinP1I GCGC 3 cut(s) 429, 628, 637
HincII GTYRAC 2 cut(s) 117, 577
HindII GTYRAC 2 cut(s) 117, 577
HinfI GANTC 5 cut(s) 71, 88, 113, 558, 609
HphI GGTGA 2 cut(s) 211, 340
Hpy166II GTNNAC 4 cut(s) 117, 219, 348, 577
Hpy188I TCNGA 5 cut(s) 70, 87, 240, 557, 596
Hpy188III TCNNGA 3 cut(s) 282, 406, 534
Hpy8I GTNNAC 4 cut(s) 117, 219, 348, 577
Hpy99I CGWCG 4 cut(s) 234, 449, 552, 648
HpyAV CCTTC 1 cut(s) 139
HpyCH4III ACNGT 1 cut(s) 121
HpyCH4IV ACGT 4 cut(s) 447, 550, 567, 585
HpyF3I CTNAG 1 cut(s) 662
HpySE526I ACGT 4 cut(s) 447, 550, 567, 585
Hsp92I GRCGYC 1 cut(s) 550
HspAI GCGC 3 cut(s) 429, 628, 637
KflI GGGWCCC 1 cut(s) 246
Kpn2I TCCGGA 1 cut(s) 405
KroI GCCGGC 1 cut(s) 172
KroNI GCCGGC 1 cut(s) 174
KspI CCGCGG 1 cut(s) 200
Kzo9I GATC 3 cut(s) 15, 293, 666
LguI GCTCTTC 1 cut(s) 463
LmnI GCTCC 1 cut(s) 148
Lsp1109I GCAGC 3 cut(s) 43, 217, 279
LweI GCATC 1 cut(s) 353
MaeII ACGT 4 cut(s) 447, 550, 567, 585
MaeIII GTNAC 2 cut(s) 287, 650
MalI GATC 3 cut(s) 17, 295, 668
MbiI CCGCTC 1 cut(s) 190
MboI GATC 3 cut(s) 15, 293, 666
MboII GAAGA 2 cut(s) 450, 522
MflI RGATCY 1 cut(s) 293
MhlI GDGCHC 3 cut(s) 62, 258, 458
MluCI AATT 1 cut(s) 597
MlyI GAGTC 2 cut(s) 122, 552
MmeI TCCRAC 1 cut(s) 580
MnlI CCTC 8 cut(s) 43, 76, 273, 278, 413, 489, 530, 669
MroI TCCGGA 1 cut(s) 405
MroNI GCCGGC 1 cut(s) 172
MseI TTAA 2 cut(s) 513, 602
MspA1I CMGCKG 1 cut(s) 199
MspR9I CCNGG 7 cut(s) 13, 131, 132, 169, 244, 425, 498
MvaI CCWGG 1 cut(s) 498
MvnI CGCG 6 cut(s) 180, 199, 444, 628, 630, 637
NaeI GCCGGC 1 cut(s) 174
NciI CCSGG 6 cut(s) 13, 131, 132, 169, 244, 425
NdeII GATC 3 cut(s) 15, 293, 666
NgoMIV GCCGGC 1 cut(s) 172
NlaIV GGNNCC 6 cut(s) 41, 247, 248, 295, 473, 541
NmeAIII GCCGAG 1 cut(s) 511
PaeR7I CTCGAG 1 cut(s) 209
PciSI GCTCTTC 1 cut(s) 463
PdiI GCCGGC 1 cut(s) 174
PfeI GAWTC 3 cut(s) 71, 88, 609
PkrI GCNGC 7 cut(s) 33, 182, 198, 207, 269, 422, 467
PleI GAGTC 2 cut(s) 121, 552
PpsI GAGTC 2 cut(s) 121, 552
PpuMI RGGWCCY 1 cut(s) 246
Psp1406I AACGTT 1 cut(s) 567
Psp5II RGGWCCY 1 cut(s) 246
Psp6I CCWGG 1 cut(s) 496
PspEI GGTNACC 1 cut(s) 650
PspFI CCCAGC 1 cut(s) 257
PspGI CCWGG 1 cut(s) 496
PspN4I GGNNCC 6 cut(s) 41, 247, 248, 295, 473, 541
PspPI GGNCC 7 cut(s) 40, 240, 246, 400, 418, 471, 539
PspPPI RGGWCCY 1 cut(s) 246
PspXI VCTCGAGB 1 cut(s) 209
PsuI RGATCY 1 cut(s) 293
RsaI GTAC 2 cut(s) 103, 377
RsaNI GTAC 2 cut(s) 102, 376
Rsr2I CGGWCCG 1 cut(s) 240
RsrII CGGWCCG 1 cut(s) 240
SacII CCGCGG 1 cut(s) 200
SalI GTCGAC 1 cut(s) 115
SapI GCTCTTC 1 cut(s) 463
SaqAI TTAA 2 cut(s) 513, 602
SatI GCNGC 7 cut(s) 32, 181, 197, 206, 268, 421, 466
Sau3AI GATC 3 cut(s) 15, 293, 666
Sau96I GGNCC 7 cut(s) 40, 240, 246, 400, 418, 471, 539
SchI GAGTC 2 cut(s) 122, 552
ScrFI CCNGG 7 cut(s) 13, 131, 132, 169, 244, 425, 498
SduI GDGCHC 3 cut(s) 62, 258, 458
SfaNI GCATC 1 cut(s) 353
Sfr274I CTCGAG 1 cut(s) 209
Sfr303I CCGCGG 1 cut(s) 200
SgrBI CCGCGG 1 cut(s) 200
SinI GGWCC 5 cut(s) 40, 240, 246, 400, 471
SlaI CTCGAG 1 cut(s) 209
SmaI CCCGGG 1 cut(s) 132
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 1 cut(s) 597
StyD4I CCNGG 7 cut(s) 11, 129, 130, 167, 242, 423, 496
StyI CCWWGG 1 cut(s) 351
TaaI ACNGT 1 cut(s) 121
TaiI ACGT 4 cut(s) 450, 553, 570, 588
TaqI TCGA 4 cut(s) 116, 210, 643, 669
TaqII GACCGA 1 cut(s) 388
TasI AATT 1 cut(s) 597
TauI GCSGC 4 cut(s) 183, 199, 423, 468
TfiI GAWTC 3 cut(s) 71, 88, 609
Tru1I TTAA 2 cut(s) 513, 602
Tru9I TTAA 2 cut(s) 513, 602
TscAI CASTG 1 cut(s) 62
TseI GCWGC 3 cut(s) 31, 205, 267
TspGWI ACGGA 4 cut(s) 89, 91, 151, 306
TspMI CCCGGG 1 cut(s) 130
TspRI CASTG 1 cut(s) 62
VpaK11BI GGWCC 5 cut(s) 40, 240, 246, 400, 471
XapI RAATTY 1 cut(s) 597
XhoI CTCGAG 1 cut(s) 209
XmaI CCCGGG 1 cut(s) 130
XmiI GTMKAC 1 cut(s) 116
ZraI GACGTC 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.