Rroxscaffold_20G00445130

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000020
OG0000098
Physical Location & Seq
Reverse (-)
84162 .. 85071
910 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_20G00445130.1

Sequence Viewer

Length: 531 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCCGCTGGACCCTACCCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

176

Amino Acids

18.62

Weight (kDa)

11.77

Isoelectric Point (pI)

80.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 189
AccI GTMKAC 1 cut(s) 116
AccII CGCG 3 cut(s) 179, 198, 444
AccIII TCCGGA 1 cut(s) 404
AclWI GGATC 3 cut(s) 23, 288, 301
AcoI YGGCCR 1 cut(s) 170
AfaI GTAC 2 cut(s) 103, 376
AfiI CCNNNNNNNGG 4 cut(s) 50, 75, 168, 499
AgsI TTSAA 2 cut(s) 125, 414
AjiI CACGTC 1 cut(s) 448
AjnI CCWGG 1 cut(s) 498
AjuI GAANNNNNNNTTGG 2 cut(s) 20, 52
AluBI AGCT 1 cut(s) 207
AluI AGCT 1 cut(s) 207
Alw21I GWGCWC 1 cut(s) 458
Alw26I GTCTC 1 cut(s) 349
AlwI GGATC 3 cut(s) 23, 288, 301
AlwNI CAGNNNCTG 1 cut(s) 342
Ama87I CYCGRG 4 cut(s) 130, 208, 265, 282
Aor13HI TCCGGA 1 cut(s) 404
AoxI GGCC 2 cut(s) 170, 417
ApeKI GCWGC 1 cut(s) 204
AspLEI GCGC 1 cut(s) 430
AspS9I GGNCC 5 cut(s) 41, 246, 399, 417, 472
AsuC2I CCSGG 5 cut(s) 13, 131, 132, 169, 424
AsuHPI GGTGA 2 cut(s) 210, 339
AvaI CYCGRG 4 cut(s) 130, 208, 265, 282
AvaII GGWCC 4 cut(s) 41, 246, 399, 472
BaeGI GKGCMC 2 cut(s) 62, 258
BamHI GGATCC 1 cut(s) 293
Bbv12I GWGCWC 1 cut(s) 458
BbvI GCAGC 1 cut(s) 216
BceAI ACGGC 1 cut(s) 477
BciT130I CCWGG 1 cut(s) 500
BcnI CCSGG 5 cut(s) 13, 131, 132, 169, 424
BcoDI GTCTC 1 cut(s) 349
BglI GCCNNNNNGGC 1 cut(s) 425
BisI GCNGC 5 cut(s) 173, 180, 196, 205, 420
BlpI GCTNAGC 1 cut(s) 488
BlsI GCNGC 5 cut(s) 174, 181, 197, 206, 421
Bme1390I CCNGG 6 cut(s) 13, 131, 132, 169, 424, 500
Bme18I GGWCC 4 cut(s) 41, 246, 399, 472
BmeT110I CYCGRG 4 cut(s) 130, 208, 265, 282
BmgBI CACGTC 1 cut(s) 448
BmgT120I GGNCC 5 cut(s) 41, 246, 399, 417, 472
BmiI GGNNCC 5 cut(s) 42, 247, 248, 295, 474
BmrFI CCNGG 6 cut(s) 13, 131, 132, 169, 424, 500
BmrI ACTGGG 2 cut(s) 151, 252
BmsI GCATC 1 cut(s) 352
BmuI ACTGGG 2 cut(s) 151, 252
Bpu1102I GCTNAGC 1 cut(s) 488
BpuMI CCSGG 5 cut(s) 13, 131, 132, 169, 424
BsaI GGTCTC 1 cut(s) 349
BsaJI CCNNGG 7 cut(s) 130, 167, 196, 283, 350, 423, 499
BsaWI WCCGGW 2 cut(s) 404, 432
Bsc4I CCNNNNNNNGG 4 cut(s) 50, 75, 168, 499
Bse118I RCCGGY 1 cut(s) 380
Bse1I ACTGG 3 cut(s) 105, 157, 247
BseAI TCCGGA 1 cut(s) 404
BseBI CCWGG 1 cut(s) 500
BseDI CCNNGG 7 cut(s) 130, 167, 196, 283, 350, 423, 499
BseLI CCNNNNNNNGG 4 cut(s) 50, 75, 168, 499
BseMII CTCAG 2 cut(s) 102, 479
BseNI ACTGG 3 cut(s) 105, 157, 247
BseSI GKGCMC 2 cut(s) 62, 258
BseX3I CGGCCG 1 cut(s) 170
BseXI GCAGC 1 cut(s) 216
BseYI CCCAGC 1 cut(s) 257
Bsh1236I CGCG 3 cut(s) 179, 198, 444
Bsh1285I CGRYCG 2 cut(s) 173, 381
BshFI GGCC 2 cut(s) 172, 419
BsiEI CGRYCG 2 cut(s) 173, 381
BsiHKAI GWGCWC 1 cut(s) 458
BsiHKCI CYCGRG 4 cut(s) 130, 208, 265, 282
BsiSI CCGG 8 cut(s) 13, 131, 169, 381, 405, 423, 433, 484
BslFI GGGAC 3 cut(s) 149, 253, 259
BslI CCNNNNNNNGG 4 cut(s) 50, 75, 168, 499
BsmAI GTCTC 1 cut(s) 349
BsmFI GGGAC 3 cut(s) 149, 253, 259
BsnI GGCC 2 cut(s) 172, 419
Bso31I GGTCTC 1 cut(s) 349
BsoBI CYCGRG 4 cut(s) 130, 208, 265, 282
Bsp1286I GDGCHC 3 cut(s) 62, 258, 458
Bsp13I TCCGGA 1 cut(s) 404
Bsp143I GATC 2 cut(s) 15, 293
Bsp1720I GCTNAGC 1 cut(s) 488
BspANI GGCC 2 cut(s) 172, 419
BspCNI CTCAG 2 cut(s) 103, 480
BspEI TCCGGA 1 cut(s) 404
BspFNI CGCG 3 cut(s) 179, 198, 444
BspLI GGNNCC 5 cut(s) 42, 247, 248, 295, 474
BspPI GGATC 3 cut(s) 23, 288, 301
BspQI GCTCTTC 1 cut(s) 463
BspTNI GGTCTC 1 cut(s) 349
BsrBI CCGCTC 1 cut(s) 189
BsrFI RCCGGY 1 cut(s) 380
BsrI ACTGG 3 cut(s) 105, 157, 247
BssAI RCCGGY 1 cut(s) 380
BssECI CCNNGG 7 cut(s) 130, 167, 196, 283, 350, 423, 499
BssMI GATC 2 cut(s) 15, 293
BssT1I CCWWGG 1 cut(s) 350
Bst2UI CCWGG 1 cut(s) 500
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 1 cut(s) 463
BstC8I GCNNGC 5 cut(s) 23, 33, 177, 467, 510
BstDEI CTNAG 2 cut(s) 111, 488
BstDSI CCRYGG 1 cut(s) 196
BstFNI CGCG 3 cut(s) 179, 198, 444
BstHHI GCGC 1 cut(s) 430
BstKTI GATC 2 cut(s) 18, 296
BstMAI GTCTC 1 cut(s) 349
BstMBI GATC 2 cut(s) 15, 293
BstMCI CGRYCG 2 cut(s) 173, 381
BstMWI GCNNNNNNNGC 8 cut(s) 195, 201, 204, 210, 267, 390, 425, 462
BstNI CCWGG 1 cut(s) 500
BstSCI CCNGG 6 cut(s) 11, 129, 130, 167, 422, 498
BstSLI GKGCMC 2 cut(s) 62, 258
BstUI CGCG 3 cut(s) 179, 198, 444
BstV1I GCAGC 1 cut(s) 216
BstX2I RGATCY 1 cut(s) 293
BstXI CCANNNNNNTGG 1 cut(s) 469
BstYI RGATCY 1 cut(s) 293
BstZI CGGCCG 1 cut(s) 170
BsuRI GGCC 2 cut(s) 172, 419
BtgI CCRYGG 1 cut(s) 196
BtrI CACGTC 1 cut(s) 448
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 1 cut(s) 62
Cac8I GCNNGC 5 cut(s) 23, 33, 177, 467, 510
CaiI CAGNNNCTG 1 cut(s) 342
CfoI GCGC 1 cut(s) 430
Cfr10I RCCGGY 1 cut(s) 380
Cfr13I GGNCC 5 cut(s) 41, 246, 399, 417, 472
Cfr42I CCGCGG 1 cut(s) 199
Cfr9I CCCGGG 1 cut(s) 130
Csp6I GTAC 2 cut(s) 102, 375
CviQI GTAC 2 cut(s) 102, 375
DdeI CTNAG 2 cut(s) 111, 488
DpnI GATC 2 cut(s) 17, 295
DpnII GATC 2 cut(s) 15, 293
EaeI YGGCCR 1 cut(s) 170
EagI CGGCCG 1 cut(s) 170
Eam1104I CTCTTC 1 cut(s) 463
EarI CTCTTC 1 cut(s) 463
EclXI CGGCCG 1 cut(s) 170
Eco130I CCWWGG 1 cut(s) 350
Eco31I GGTCTC 1 cut(s) 349
Eco47I GGWCC 4 cut(s) 41, 246, 399, 472
Eco52I CGGCCG 1 cut(s) 170
Eco88I CYCGRG 4 cut(s) 130, 208, 265, 282
EcoO109I RGGNCCY 1 cut(s) 246
EcoRII CCWGG 1 cut(s) 498
EcoT14I CCWWGG 1 cut(s) 350
ErhI CCWWGG 1 cut(s) 350
FaiI YATR 1 cut(s) 371
FaqI GGGAC 3 cut(s) 149, 253, 259
FauI CCCGC 4 cut(s) 30, 70, 194, 474
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 5 cut(s) 173, 180, 196, 205, 420
Fsp4HI GCNGC 5 cut(s) 173, 180, 196, 205, 420
GlaI GCGC 1 cut(s) 429
GluI GCNGC 5 cut(s) 173, 180, 196, 205, 420
GsaI CCCAGC 1 cut(s) 261
HaeIII GGCC 2 cut(s) 172, 419
HapII CCGG 8 cut(s) 13, 131, 169, 381, 405, 423, 433, 484
HhaI GCGC 1 cut(s) 430
Hin6I GCGC 1 cut(s) 428
HinP1I GCGC 1 cut(s) 428
HincII GTYRAC 1 cut(s) 117
HindII GTYRAC 1 cut(s) 117
HinfI GANTC 3 cut(s) 71, 88, 113
HpaII CCGG 8 cut(s) 13, 131, 169, 381, 405, 423, 433, 484
HphI GGTGA 2 cut(s) 210, 339
Hpy166II GTNNAC 3 cut(s) 117, 218, 347
Hpy188I TCNGA 3 cut(s) 70, 87, 112
Hpy188III TCNNGA 3 cut(s) 238, 282, 405
Hpy8I GTNNAC 3 cut(s) 117, 218, 347
Hpy99I CGWCG 2 cut(s) 233, 449
HpyAV CCTTC 1 cut(s) 139
HpyCH4III ACNGT 1 cut(s) 121
HpyCH4IV ACGT 1 cut(s) 447
HpyF10VI GCNNNNNNNGC 8 cut(s) 195, 201, 204, 210, 267, 390, 425, 462
HpyF3I CTNAG 2 cut(s) 111, 488
HpySE526I ACGT 1 cut(s) 447
HspAI GCGC 1 cut(s) 428
KflI GGGWCCC 1 cut(s) 246
Kpn2I TCCGGA 1 cut(s) 404
KspI CCGCGG 1 cut(s) 199
Kzo9I GATC 2 cut(s) 15, 293
LguI GCTCTTC 1 cut(s) 463
LmnI GCTCC 1 cut(s) 148
Lsp1109I GCAGC 1 cut(s) 216
LweI GCATC 1 cut(s) 352
MaeII ACGT 1 cut(s) 447
MaeIII GTNAC 1 cut(s) 287
MalI GATC 2 cut(s) 17, 295
MbiI CCGCTC 1 cut(s) 189
MboI GATC 2 cut(s) 15, 293
MboII GAAGA 1 cut(s) 450
MflI RGATCY 1 cut(s) 293
MhlI GDGCHC 3 cut(s) 62, 258, 458
MlyI GAGTC 1 cut(s) 122
MnlI CCTC 7 cut(s) 44, 76, 274, 278, 332, 412, 491
MroI TCCGGA 1 cut(s) 404
MseI TTAA 1 cut(s) 516
MspA1I CMGCKG 2 cut(s) 198, 469
MspI CCGG 8 cut(s) 13, 131, 169, 381, 405, 423, 433, 484
MspR9I CCNGG 6 cut(s) 13, 131, 132, 169, 424, 500
MvaI CCWGG 1 cut(s) 500
MvnI CGCG 3 cut(s) 179, 198, 444
MwoI GCNNNNNNNGC 8 cut(s) 195, 201, 204, 210, 267, 390, 425, 462
NciI CCSGG 5 cut(s) 13, 131, 132, 169, 424
NdeII GATC 2 cut(s) 15, 293
NlaIV GGNNCC 5 cut(s) 42, 247, 248, 295, 474
PaeR7I CTCGAG 2 cut(s) 208, 265
PciSI GCTCTTC 1 cut(s) 463
PfeI GAWTC 2 cut(s) 71, 88
PkrI GCNGC 5 cut(s) 174, 181, 197, 206, 421
PleI GAGTC 1 cut(s) 121
PpsI GAGTC 1 cut(s) 121
PpuMI RGGWCCY 1 cut(s) 246
Psp5II RGGWCCY 1 cut(s) 246
Psp6I CCWGG 1 cut(s) 498
PspFI CCCAGC 1 cut(s) 257
PspGI CCWGG 1 cut(s) 498
PspN4I GGNNCC 5 cut(s) 42, 247, 248, 295, 474
PspPI GGNCC 5 cut(s) 41, 246, 399, 417, 472
PspPPI RGGWCCY 1 cut(s) 246
PspXI VCTCGAGB 2 cut(s) 208, 265
PstNI CAGNNNCTG 1 cut(s) 342
PsuI RGATCY 1 cut(s) 293
RsaI GTAC 2 cut(s) 103, 376
RsaNI GTAC 2 cut(s) 102, 375
SacII CCGCGG 1 cut(s) 199
SalI GTCGAC 1 cut(s) 115
SapI GCTCTTC 1 cut(s) 463
SaqAI TTAA 1 cut(s) 516
SatI GCNGC 5 cut(s) 173, 180, 196, 205, 420
Sau3AI GATC 2 cut(s) 15, 293
Sau96I GGNCC 5 cut(s) 41, 246, 399, 417, 472
SchI GAGTC 1 cut(s) 122
ScrFI CCNGG 6 cut(s) 13, 131, 132, 169, 424, 500
SduI GDGCHC 3 cut(s) 62, 258, 458
SetI ASST 5 cut(s) 209, 289, 352, 361, 450
SfaNI GCATC 1 cut(s) 352
Sfr274I CTCGAG 2 cut(s) 208, 265
Sfr303I CCGCGG 1 cut(s) 199
SgrBI CCGCGG 1 cut(s) 199
SinI GGWCC 4 cut(s) 41, 246, 399, 472
SlaI CTCGAG 2 cut(s) 208, 265
SmaI CCCGGG 1 cut(s) 132
SmlI CTYRAG 2 cut(s) 208, 265
SmoI CTYRAG 2 cut(s) 208, 265
StyD4I CCNGG 6 cut(s) 11, 129, 130, 167, 422, 498
StyI CCWWGG 1 cut(s) 350
TaaI ACNGT 1 cut(s) 121
TaiI ACGT 1 cut(s) 450
TaqI TCGA 3 cut(s) 116, 209, 266
TaqII GACCGA 1 cut(s) 387
TauI GCSGC 4 cut(s) 175, 182, 198, 422
TfiI GAWTC 2 cut(s) 71, 88
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TscAI CASTG 1 cut(s) 62
TseI GCWGC 1 cut(s) 204
TspGWI ACGGA 4 cut(s) 89, 91, 151, 306
TspMI CCCGGG 1 cut(s) 130
TspRI CASTG 1 cut(s) 62
VpaK11BI GGWCC 4 cut(s) 41, 246, 399, 472
XhoI CTCGAG 2 cut(s) 208, 265
XmaI CCCGGG 1 cut(s) 130
XmiI GTMKAC 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.