Rroxscaffold_45G00438900

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000045
OG0000098
Physical Location & Seq
Forward (+)
75531 .. 76697
1167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_45G00438900.1

Sequence Viewer

Length: 741 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCGGATCAGCCCGCCGAAGCAGGCTTTGGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

246

Amino Acids

27.42

Weight (kDa)

10.98

Isoelectric Point (pI)

58.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 721
AccBSI CCGCTC 1 cut(s) 442
AccI GTMKAC 1 cut(s) 367
AccII CGCG 3 cut(s) 432, 451, 697
AccIII TCCGGA 1 cut(s) 657
AclWI GGATC 5 cut(s) 34, 136, 317, 540, 553
AcoI YGGCCR 1 cut(s) 422
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 354, 628
AfiI CCNNNNNNNGG 5 cut(s) 420, 424, 431, 721, 734
AgsI TTSAA 2 cut(s) 376, 667
AjiI CACGTC 1 cut(s) 701
AjuI GAANNNNNNNTTGG 2 cut(s) 314, 346
AluBI AGCT 4 cut(s) 105, 186, 229, 460
AluI AGCT 4 cut(s) 105, 186, 229, 460
Alw21I GWGCWC 2 cut(s) 231, 711
Alw26I GTCTC 1 cut(s) 601
AlwI GGATC 5 cut(s) 34, 136, 317, 540, 553
AlwNI CAGNNNCTG 2 cut(s) 594, 721
Ama87I CYCGRG 4 cut(s) 381, 461, 517, 534
Aor13HI TCCGGA 1 cut(s) 657
AoxI GGCC 3 cut(s) 136, 422, 670
ApeKI GCWGC 2 cut(s) 58, 457
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 683
AspS9I GGNCC 4 cut(s) 499, 652, 670, 724
AsuC2I CCSGG 5 cut(s) 382, 383, 421, 634, 677
AsuHPI GGTGA 2 cut(s) 463, 591
AvaI CYCGRG 4 cut(s) 381, 461, 517, 534
AvaII GGWCC 3 cut(s) 499, 652, 724
BaeGI GKGCMC 1 cut(s) 511
BamHI GGATCC 1 cut(s) 545
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 292
Bbv12I GWGCWC 2 cut(s) 231, 711
BbvI GCAGC 2 cut(s) 45, 469
BcnI CCSGG 5 cut(s) 382, 383, 421, 634, 677
BcoDI GTCTC 1 cut(s) 601
BfaI CTAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 678
BisI GCNGC 7 cut(s) 59, 269, 433, 449, 458, 673, 719
BlsI GCNGC 7 cut(s) 60, 270, 434, 450, 459, 674, 720
Bme1390I CCNGG 5 cut(s) 382, 383, 421, 634, 677
Bme18I GGWCC 3 cut(s) 499, 652, 724
BmeT110I CYCGRG 4 cut(s) 381, 461, 517, 534
BmgBI CACGTC 1 cut(s) 701
BmgT120I GGNCC 4 cut(s) 499, 652, 670, 724
BmiI GGNNCC 4 cut(s) 500, 501, 547, 726
BmrFI CCNGG 5 cut(s) 382, 383, 421, 634, 677
BmrI ACTGGG 2 cut(s) 403, 505
BmsI GCATC 1 cut(s) 604
BmuI ACTGGG 2 cut(s) 403, 505
BpiI GAAGAC 1 cut(s) 292
BpuMI CCSGG 5 cut(s) 382, 383, 421, 634, 677
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 601
BsaJI CCNNGG 7 cut(s) 381, 382, 419, 449, 535, 602, 676
BsaWI WCCGGW 2 cut(s) 657, 685
BsaXI ACNNNNNCTCC 1 cut(s) 716
Bsc4I CCNNNNNNNGG 5 cut(s) 420, 424, 431, 721, 734
Bse118I RCCGGY 1 cut(s) 424
Bse1I ACTGG 5 cut(s) 69, 169, 356, 409, 500
BseAI TCCGGA 1 cut(s) 657
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 381, 382, 419, 449, 535, 602, 676
BseLI CCNNNNNNNGG 5 cut(s) 420, 424, 431, 721, 734
BseMII CTCAG 1 cut(s) 353
BseNI ACTGG 5 cut(s) 69, 169, 356, 409, 500
BseSI GKGCMC 1 cut(s) 511
BseX3I CGGCCG 1 cut(s) 422
BseXI GCAGC 2 cut(s) 45, 469
BseYI CCCAGC 2 cut(s) 273, 510
Bsh1236I CGCG 3 cut(s) 432, 451, 697
Bsh1285I CGRYCG 2 cut(s) 425, 633
BshFI GGCC 3 cut(s) 138, 424, 672
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 425, 633
BsiHKAI GWGCWC 2 cut(s) 231, 711
BsiHKCI CYCGRG 4 cut(s) 381, 461, 517, 534
BsiSI CCGG 9 cut(s) 307, 382, 421, 425, 633, 658, 676, 686, 735
BslFI GGGAC 3 cut(s) 401, 506, 512
BslI CCNNNNNNNGG 5 cut(s) 420, 424, 431, 721, 734
BsmAI GTCTC 1 cut(s) 601
BsmFI GGGAC 3 cut(s) 401, 506, 512
BsnI GGCC 3 cut(s) 138, 424, 672
Bso31I GGTCTC 1 cut(s) 601
BsoBI CYCGRG 4 cut(s) 381, 461, 517, 534
Bsp1286I GDGCHC 3 cut(s) 231, 511, 711
Bsp13I TCCGGA 1 cut(s) 657
Bsp143I GATC 4 cut(s) 26, 128, 309, 545
BspANI GGCC 3 cut(s) 138, 424, 672
BspCNI CTCAG 1 cut(s) 354
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 657
BspFNI CGCG 3 cut(s) 432, 451, 697
BspLI GGNNCC 4 cut(s) 500, 501, 547, 726
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 317, 540, 553
BspQI GCTCTTC 2 cut(s) 4, 716
BspTNI GGTCTC 1 cut(s) 601
BsrBI CCGCTC 1 cut(s) 442
BsrFI RCCGGY 1 cut(s) 424
BsrI ACTGG 5 cut(s) 69, 169, 356, 409, 500
BssAI RCCGGY 1 cut(s) 424
BssECI CCNNGG 7 cut(s) 381, 382, 419, 449, 535, 602, 676
BssMI GATC 4 cut(s) 26, 128, 309, 545
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 602
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 2 cut(s) 151, 372
Bst6I CTCTTC 2 cut(s) 4, 716
BstC8I GCNNGC 4 cut(s) 317, 327, 426, 430
BstDEI CTNAG 2 cut(s) 235, 362
BstDSI CCRYGG 1 cut(s) 449
BstFNI CGCG 3 cut(s) 432, 451, 697
BstHHI GCGC 1 cut(s) 683
BstKTI GATC 4 cut(s) 29, 131, 312, 548
BstMAI GTCTC 1 cut(s) 601
BstMBI GATC 4 cut(s) 26, 128, 309, 545
BstMCI CGRYCG 2 cut(s) 425, 633
BstSCI CCNGG 5 cut(s) 380, 381, 419, 632, 675
BstSLI GKGCMC 1 cut(s) 511
BstUI CGCG 3 cut(s) 432, 451, 697
BstV1I GCAGC 2 cut(s) 45, 469
BstV2I GAAGAC 1 cut(s) 292
BstX2I RGATCY 1 cut(s) 545
BstYI RGATCY 1 cut(s) 545
BstZI CGGCCG 1 cut(s) 422
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 424, 672
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 449
BtrI CACGTC 1 cut(s) 701
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 4 cut(s) 317, 327, 426, 430
CaiI CAGNNNCTG 2 cut(s) 594, 721
CfoI GCGC 1 cut(s) 683
Cfr10I RCCGGY 1 cut(s) 424
Cfr13I GGNCC 4 cut(s) 499, 652, 670, 724
Cfr42I CCGCGG 1 cut(s) 452
Cfr9I CCCGGG 1 cut(s) 381
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 353, 627
CviQI GTAC 3 cut(s) 162, 353, 627
DdeI CTNAG 2 cut(s) 235, 362
DpnI GATC 4 cut(s) 28, 130, 311, 547
DpnII GATC 4 cut(s) 26, 128, 309, 545
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 422
EagI CGGCCG 1 cut(s) 422
Eam1104I CTCTTC 2 cut(s) 4, 716
EarI CTCTTC 2 cut(s) 4, 716
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 422
Eco130I CCWWGG 1 cut(s) 602
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 601
Eco47I GGWCC 3 cut(s) 499, 652, 724
Eco52I CGGCCG 1 cut(s) 422
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 381, 461, 517, 534
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 499
EcoT14I CCWWGG 1 cut(s) 602
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 602
FaiI YATR 2 cut(s) 47, 623
FaqI GGGAC 3 cut(s) 401, 506, 512
FauI CCCGC 2 cut(s) 324, 447
FblI GTMKAC 1 cut(s) 367
Fnu4HI GCNGC 7 cut(s) 59, 269, 433, 449, 458, 673, 719
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 7 cut(s) 59, 269, 433, 449, 458, 673, 719
FspBI CTAG 1 cut(s) 102
GlaI GCGC 1 cut(s) 682
GluI GCNGC 7 cut(s) 59, 269, 433, 449, 458, 673, 719
GsaI CCCAGC 2 cut(s) 277, 514
HaeIII GGCC 3 cut(s) 138, 424, 672
HapII CCGG 9 cut(s) 307, 382, 421, 425, 633, 658, 676, 686, 735
HhaI GCGC 1 cut(s) 683
Hin6I GCGC 1 cut(s) 681
HinP1I GCGC 1 cut(s) 681
HincII GTYRAC 1 cut(s) 368
HindII GTYRAC 1 cut(s) 368
HinfI GANTC 3 cut(s) 175, 339, 364
HpaII CCGG 9 cut(s) 307, 382, 421, 425, 633, 658, 676, 686, 735
HphI GGTGA 2 cut(s) 463, 591
Hpy166II GTNNAC 3 cut(s) 368, 471, 599
Hpy188I TCNGA 4 cut(s) 94, 174, 338, 363
Hpy188III TCNNGA 3 cut(s) 491, 534, 658
Hpy8I GTNNAC 3 cut(s) 368, 471, 599
Hpy99I CGWCG 3 cut(s) 44, 486, 702
HpyAV CCTTC 2 cut(s) 17, 391
HpyCH4III ACNGT 2 cut(s) 151, 372
HpyCH4IV ACGT 2 cut(s) 39, 700
HpyF3I CTNAG 2 cut(s) 235, 362
HpySE526I ACGT 2 cut(s) 39, 700
HspAI GCGC 1 cut(s) 681
KflI GGGWCCC 1 cut(s) 499
Kpn2I TCCGGA 1 cut(s) 657
KroI GCCGGC 1 cut(s) 424
KroNI GCCGGC 1 cut(s) 426
KspI CCGCGG 1 cut(s) 452
Kzo9I GATC 4 cut(s) 26, 128, 309, 545
LguI GCTCTTC 2 cut(s) 4, 716
LmnI GCTCC 1 cut(s) 400
Lsp1109I GCAGC 2 cut(s) 45, 469
LweI GCATC 1 cut(s) 604
MaeI CTAG 1 cut(s) 102
MaeII ACGT 2 cut(s) 39, 700
MaeIII GTNAC 2 cut(s) 83, 539
MalI GATC 4 cut(s) 28, 130, 311, 547
MbiI CCGCTC 1 cut(s) 442
MboI GATC 4 cut(s) 26, 128, 309, 545
MboII GAAGA 3 cut(s) 21, 292, 703
MflI RGATCY 1 cut(s) 545
MhlI GDGCHC 3 cut(s) 231, 511, 711
MluCI AATT 1 cut(s) 110
MlyI GAGTC 1 cut(s) 373
MmeI TCCRAC 1 cut(s) 316
MnlI CCTC 5 cut(s) 109, 526, 530, 584, 665
MroI TCCGGA 1 cut(s) 657
MroNI GCCGGC 1 cut(s) 424
MseI TTAA 2 cut(s) 108, 257
MspA1I CMGCKG 2 cut(s) 451, 721
MspI CCGG 9 cut(s) 307, 382, 421, 425, 633, 658, 676, 686, 735
MspR9I CCNGG 5 cut(s) 382, 383, 421, 634, 677
MvnI CGCG 3 cut(s) 432, 451, 697
NaeI GCCGGC 1 cut(s) 426
NciI CCSGG 5 cut(s) 382, 383, 421, 634, 677
NdeII GATC 4 cut(s) 26, 128, 309, 545
NgoMIV GCCGGC 1 cut(s) 424
NlaIV GGNNCC 4 cut(s) 500, 501, 547, 726
PaeR7I CTCGAG 2 cut(s) 461, 517
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 716
PdiI GCCGGC 1 cut(s) 426
PfeI GAWTC 2 cut(s) 175, 339
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 721
PkrI GCNGC 7 cut(s) 60, 270, 434, 450, 459, 674, 720
PleI GAGTC 1 cut(s) 372
PpsI GAGTC 1 cut(s) 372
PpuMI RGGWCCY 1 cut(s) 499
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 499
PspFI CCCAGC 2 cut(s) 273, 510
PspN4I GGNNCC 4 cut(s) 500, 501, 547, 726
PspPI GGNCC 4 cut(s) 499, 652, 670, 724
PspPPI RGGWCCY 1 cut(s) 499
PspXI VCTCGAGB 2 cut(s) 461, 517
PstNI CAGNNNCTG 2 cut(s) 594, 721
PsuI RGATCY 1 cut(s) 545
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 354, 628
RsaNI GTAC 3 cut(s) 162, 353, 627
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 452
SalI GTCGAC 1 cut(s) 366
SapI GCTCTTC 2 cut(s) 4, 716
SaqAI TTAA 2 cut(s) 108, 257
SatI GCNGC 7 cut(s) 59, 269, 433, 449, 458, 673, 719
Sau3AI GATC 4 cut(s) 26, 128, 309, 545
Sau96I GGNCC 4 cut(s) 499, 652, 670, 724
SchI GAGTC 1 cut(s) 373
ScrFI CCNGG 5 cut(s) 382, 383, 421, 634, 677
SduI GDGCHC 3 cut(s) 231, 511, 711
SfaNI GCATC 1 cut(s) 604
Sfr274I CTCGAG 2 cut(s) 461, 517
Sfr303I CCGCGG 1 cut(s) 452
SgrBI CCGCGG 1 cut(s) 452
SinI GGWCC 3 cut(s) 499, 652, 724
SlaI CTCGAG 2 cut(s) 461, 517
SmaI CCCGGG 1 cut(s) 383
SmlI CTYRAG 2 cut(s) 461, 517
SmoI CTYRAG 2 cut(s) 461, 517
Sse9I AATT 1 cut(s) 110
SspMI CTAG 1 cut(s) 102
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 5 cut(s) 380, 381, 419, 632, 675
StyI CCWWGG 1 cut(s) 602
TaaI ACNGT 2 cut(s) 151, 372
TaiI ACGT 2 cut(s) 42, 703
TaqI TCGA 5 cut(s) 21, 131, 367, 462, 518
TaqII GACCGA 1 cut(s) 640
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 435, 451, 675, 721
TfiI GAWTC 2 cut(s) 175, 339
Tru1I TTAA 2 cut(s) 108, 257
Tru9I TTAA 2 cut(s) 108, 257
TseI GCWGC 2 cut(s) 58, 457
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 3 cut(s) 340, 403, 558
TspMI CCCGGG 1 cut(s) 381
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 721
VpaK11BI GGWCC 3 cut(s) 499, 652, 724
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 461, 517
XmaI CCCGGG 1 cut(s) 381
XmiI GTMKAC 1 cut(s) 367
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.