Rroxscaffold_13G00448630

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000013
OG0000098
Physical Location & Seq
Forward (+)
4103 .. 4579
477 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_13G00448630.1

Sequence Viewer

Length: 369 bp
ATGGCACTCGGTCCTCCGGATTTCAAGGGCCGCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGCCGATTCCCTTTCGAAGTTCGCGCGAGACGCGCTATCAGACGGCTTACCCAGCTCTTAGGATCGACTAACCCATGTGCAAGTGCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTGGCCAAAGTTCTCATTTGAATATTTGCTACTACCAAGATCTGCACCGACGGCCGCTAGCCCGGGCTCACGCCCCAGGTTTTGCAGCGACGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

122

Amino Acids

13.4

Weight (kDa)

11.21

Isoelectric Point (pI)

57.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 78
AccII CGCG 6 cut(s) 33, 54, 132, 134, 141, 320
AccIII TCCGGA 1 cut(s) 16
AciI CCGC 6 cut(s) 31, 33, 61, 76, 279, 318
AclWI GGATC 1 cut(s) 178
AcoI YGGCCR 3 cut(s) 227, 276, 358
AcyI GRCGYC 1 cut(s) 315
AfiI CCNNNNNNNGG 5 cut(s) 78, 91, 107, 219, 360
AgsI TTSAA 2 cut(s) 25, 245
AjiI CACGTC 1 cut(s) 58
AjnI CCWGG 3 cut(s) 106, 299, 340
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
Alw21I GWGCWC 1 cut(s) 68
Alw26I GTCTC 1 cut(s) 130
AlwI GGATC 1 cut(s) 178
AlwNI CAGNNNCTG 1 cut(s) 78
Ama87I CYCGRG 1 cut(s) 286
Aor13HI TCCGGA 1 cut(s) 16
AoxI GGCC 7 cut(s) 28, 109, 221, 227, 276, 338, 358
ApeKI GCWGC 1 cut(s) 309
AspLEI GCGC 4 cut(s) 40, 134, 143, 322
AspS9I GGNCC 4 cut(s) 11, 28, 81, 338
AsuC2I CCSGG 3 cut(s) 287, 288, 362
AsuII TTCGAA 1 cut(s) 123
AsuNHI GCTAGC 1 cut(s) 281
AvaI CYCGRG 1 cut(s) 286
AvaII GGWCC 2 cut(s) 11, 81
BalI TGGCCA 1 cut(s) 229
BanII GRGCYC 1 cut(s) 293
Bbv12I GWGCWC 1 cut(s) 68
BbvI GCAGC 1 cut(s) 321
BceAI ACGGC 3 cut(s) 85, 167, 291
BciT130I CCWGG 3 cut(s) 108, 301, 342
BcnI CCSGG 3 cut(s) 287, 288, 362
BcoDI GTCTC 1 cut(s) 130
BfaI CTAG 1 cut(s) 282
BglI GCCNNNNNGGC 1 cut(s) 357
BglII AGATCT 1 cut(s) 263
BisI GCNGC 5 cut(s) 31, 76, 279, 310, 318
BlpI GCTNAGC 1 cut(s) 96
BlsI GCNGC 5 cut(s) 32, 77, 280, 311, 319
Bme1390I CCNGG 6 cut(s) 108, 287, 288, 301, 342, 362
Bme18I GGWCC 2 cut(s) 11, 81
BmeT110I CYCGRG 1 cut(s) 286
BmgBI CACGTC 1 cut(s) 58
BmgT120I GGNCC 4 cut(s) 11, 28, 81, 338
BmiI GGNNCC 3 cut(s) 83, 206, 339
BmrFI CCNGG 6 cut(s) 108, 287, 288, 301, 342, 362
BmtI GCTAGC 1 cut(s) 285
Bpu1102I GCTNAGC 1 cut(s) 96
Bpu14I TTCGAA 1 cut(s) 123
BpuMI CCSGG 3 cut(s) 287, 288, 362
BsaHI GRCGYC 1 cut(s) 315
BsaJI CCNNGG 4 cut(s) 31, 224, 286, 299
BsaWI WCCGGW 2 cut(s) 16, 42
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 5 cut(s) 78, 91, 107, 219, 360
BseAI TCCGGA 1 cut(s) 16
BseBI CCWGG 3 cut(s) 108, 301, 342
BseDI CCNNGG 4 cut(s) 31, 224, 286, 299
BseLI CCNNNNNNNGG 5 cut(s) 78, 91, 107, 219, 360
BseMII CTCAG 1 cut(s) 87
BseX3I CGGCCG 2 cut(s) 276, 358
BseXI GCAGC 1 cut(s) 321
BseYI CCCAGC 1 cut(s) 159
BsgI GTGCAG 1 cut(s) 252
Bsh1236I CGCG 6 cut(s) 33, 54, 132, 134, 141, 320
Bsh1285I CGRYCG 2 cut(s) 279, 361
BshFI GGCC 7 cut(s) 30, 111, 223, 229, 278, 340, 360
BsiEI CGRYCG 2 cut(s) 279, 361
BsiHKAI GWGCWC 1 cut(s) 68
BsiHKCI CYCGRG 1 cut(s) 286
BsiSI CCGG 5 cut(s) 17, 43, 92, 287, 361
BslI CCNNNNNNNGG 5 cut(s) 78, 91, 107, 219, 360
BsmAI GTCTC 1 cut(s) 130
BsmBI CGTCTC 1 cut(s) 130
BsnI GGCC 7 cut(s) 30, 111, 223, 229, 278, 340, 360
BsoBI CYCGRG 1 cut(s) 286
Bsp119I TTCGAA 1 cut(s) 123
Bsp1286I GDGCHC 2 cut(s) 68, 293
Bsp13I TCCGGA 1 cut(s) 16
Bsp143I GATC 2 cut(s) 170, 263
Bsp1720I GCTNAGC 1 cut(s) 96
BspACI CCGC 6 cut(s) 31, 33, 61, 76, 279, 318
BspANI GGCC 7 cut(s) 30, 111, 223, 229, 278, 340, 360
BspCNI CTCAG 1 cut(s) 88
BspEI TCCGGA 1 cut(s) 16
BspFNI CGCG 6 cut(s) 33, 54, 132, 134, 141, 320
BspLI GGNNCC 3 cut(s) 83, 206, 339
BspOI GCTAGC 1 cut(s) 285
BspPI GGATC 1 cut(s) 178
BspQI GCTCTTC 1 cut(s) 73
BspT104I TTCGAA 1 cut(s) 123
BssECI CCNNGG 4 cut(s) 31, 224, 286, 299
BssMI GATC 2 cut(s) 170, 263
BssNI GRCGYC 1 cut(s) 315
BssT1I CCWWGG 1 cut(s) 224
Bst2UI CCWGG 3 cut(s) 108, 301, 342
Bst6I CTCTTC 2 cut(s) 73, 222
BstACI GRCGYC 1 cut(s) 315
BstBI TTCGAA 1 cut(s) 123
BstC8I GCNNGC 1 cut(s) 283
BstDEI CTNAG 2 cut(s) 96, 166
BstDSI CCRYGG 1 cut(s) 31
BstFNI CGCG 6 cut(s) 33, 54, 132, 134, 141, 320
BstHHI GCGC 4 cut(s) 40, 134, 143, 322
BstKTI GATC 2 cut(s) 173, 266
BstMAI GTCTC 1 cut(s) 130
BstMBI GATC 2 cut(s) 170, 263
BstMCI CGRYCG 2 cut(s) 279, 361
BstMWI GCNNNNNNNGC 6 cut(s) 72, 138, 140, 160, 275, 357
BstNI CCWGG 3 cut(s) 108, 301, 342
BstSCI CCNGG 6 cut(s) 106, 285, 286, 299, 340, 360
BstUI CGCG 6 cut(s) 33, 54, 132, 134, 141, 320
BstV1I GCAGC 1 cut(s) 321
BstX2I RGATCY 1 cut(s) 263
BstYI RGATCY 1 cut(s) 263
BstZI CGGCCG 2 cut(s) 276, 358
BsuRI GGCC 7 cut(s) 30, 111, 223, 229, 278, 340, 360
BtgI CCRYGG 1 cut(s) 31
BtrI CACGTC 1 cut(s) 58
Cac8I GCNNGC 1 cut(s) 283
CaiI CAGNNNCTG 1 cut(s) 78
CfoI GCGC 4 cut(s) 40, 134, 143, 322
Cfr13I GGNCC 4 cut(s) 11, 28, 81, 338
Cfr42I CCGCGG 1 cut(s) 34
Cfr9I CCCGGG 1 cut(s) 286
CseI GACGC 2 cut(s) 147, 323
CviAII CATG 2 cut(s) 183, 201
DdeI CTNAG 2 cut(s) 96, 166
DpnI GATC 2 cut(s) 172, 265
DpnII GATC 2 cut(s) 170, 263
EaeI YGGCCR 3 cut(s) 227, 276, 358
EagI CGGCCG 2 cut(s) 276, 358
Eam1104I CTCTTC 2 cut(s) 73, 222
EarI CTCTTC 2 cut(s) 73, 222
EclXI CGGCCG 2 cut(s) 276, 358
Eco130I CCWWGG 1 cut(s) 224
Eco24I GRGCYC 1 cut(s) 293
Eco47I GGWCC 2 cut(s) 11, 81
Eco52I CGGCCG 2 cut(s) 276, 358
Eco88I CYCGRG 1 cut(s) 286
EcoO109I RGGNCCY 1 cut(s) 338
EcoRII CCWGG 3 cut(s) 106, 299, 340
EcoT14I CCWWGG 1 cut(s) 224
EcoT38I GRGCYC 1 cut(s) 293
ErhI CCWWGG 1 cut(s) 224
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 2 cut(s) 186, 204
FaiI YATR 3 cut(s) 184, 202, 367
FatI CATG 2 cut(s) 182, 200
FauI CCCGC 1 cut(s) 26
Fnu4HI GCNGC 5 cut(s) 31, 76, 279, 310, 318
FriOI GRGCYC 1 cut(s) 293
Fsp4HI GCNGC 5 cut(s) 31, 76, 279, 310, 318
FspBI CTAG 1 cut(s) 282
GlaI GCGC 4 cut(s) 39, 133, 142, 321
GluI GCNGC 5 cut(s) 31, 76, 279, 310, 318
GsaI CCCAGC 1 cut(s) 163
HaeIII GGCC 7 cut(s) 30, 111, 223, 229, 278, 340, 360
HapII CCGG 5 cut(s) 17, 43, 92, 287, 361
HgaI GACGC 2 cut(s) 147, 323
HhaI GCGC 4 cut(s) 40, 134, 143, 322
Hin1I GRCGYC 1 cut(s) 315
Hin1II CATG 2 cut(s) 186, 204
Hin6I GCGC 4 cut(s) 38, 132, 141, 320
HinP1I GCGC 4 cut(s) 38, 132, 141, 320
HinfI GANTC 1 cut(s) 114
HpaII CCGG 5 cut(s) 17, 43, 92, 287, 361
Hpy166II GTNNAC 1 cut(s) 198
Hpy188I TCNGA 1 cut(s) 149
Hpy188III TCNNGA 1 cut(s) 17
Hpy8I GTNNAC 1 cut(s) 198
Hpy99I CGWCG 4 cut(s) 59, 277, 317, 359
HpyCH4IV ACGT 1 cut(s) 57
HpyCH4V TGCA 3 cut(s) 188, 269, 309
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 138, 140, 160, 275, 357
HpyF3I CTNAG 2 cut(s) 96, 166
HpySE526I ACGT 1 cut(s) 57
Hsp92I GRCGYC 1 cut(s) 315
Hsp92II CATG 2 cut(s) 186, 204
HspAI GCGC 4 cut(s) 38, 132, 141, 320
Kpn2I TCCGGA 1 cut(s) 16
KspI CCGCGG 1 cut(s) 34
Kzo9I GATC 2 cut(s) 170, 263
LguI GCTCTTC 1 cut(s) 73
Lsp1109I GCAGC 1 cut(s) 321
MaeI CTAG 1 cut(s) 282
MaeII ACGT 1 cut(s) 57
MalI GATC 2 cut(s) 172, 265
MboI GATC 2 cut(s) 170, 263
MboII GAAGA 2 cut(s) 60, 209
MflI RGATCY 1 cut(s) 263
MhlI GDGCHC 2 cut(s) 68, 293
MlsI TGGCCA 1 cut(s) 229
MluNI TGGCCA 1 cut(s) 229
MnlI CCTC 4 cut(s) 24, 99, 225, 334
Mox20I TGGCCA 1 cut(s) 229
MroI TCCGGA 1 cut(s) 16
MscI TGGCCA 1 cut(s) 229
Msp20I TGGCCA 1 cut(s) 229
MspA1I CMGCKG 2 cut(s) 33, 78
MspI CCGG 5 cut(s) 17, 43, 92, 287, 361
MspR9I CCNGG 6 cut(s) 108, 287, 288, 301, 342, 362
MvaI CCWGG 3 cut(s) 108, 301, 342
MvnI CGCG 6 cut(s) 33, 54, 132, 134, 141, 320
MwoI GCNNNNNNNGC 6 cut(s) 72, 138, 140, 160, 275, 357
NciI CCSGG 3 cut(s) 287, 288, 362
NdeII GATC 2 cut(s) 170, 263
NheI GCTAGC 1 cut(s) 281
NlaIII CATG 2 cut(s) 186, 204
NlaIV GGNNCC 3 cut(s) 83, 206, 339
NspV TTCGAA 1 cut(s) 123
PciSI GCTCTTC 1 cut(s) 73
PfeI GAWTC 1 cut(s) 114
PflMI CCANNNNNTGG 1 cut(s) 78
PkrI GCNGC 5 cut(s) 32, 77, 280, 311, 319
Psp6I CCWGG 3 cut(s) 106, 299, 340
PspFI CCCAGC 1 cut(s) 159
PspGI CCWGG 3 cut(s) 106, 299, 340
PspN4I GGNNCC 3 cut(s) 83, 206, 339
PspPI GGNCC 4 cut(s) 11, 28, 81, 338
PstNI CAGNNNCTG 1 cut(s) 78
PsuI RGATCY 1 cut(s) 263
SacII CCGCGG 1 cut(s) 34
SapI GCTCTTC 1 cut(s) 73
SatI GCNGC 5 cut(s) 31, 76, 279, 310, 318
Sau3AI GATC 2 cut(s) 170, 263
Sau96I GGNCC 4 cut(s) 11, 28, 81, 338
ScrFI CCNGG 6 cut(s) 108, 287, 288, 301, 342, 362
SduI GDGCHC 2 cut(s) 68, 293
SetI ASST 5 cut(s) 60, 91, 165, 210, 305
Sfr303I CCGCGG 1 cut(s) 34
SfuI TTCGAA 1 cut(s) 123
SgrBI CCGCGG 1 cut(s) 34
SinI GGWCC 2 cut(s) 11, 81
SmaI CCCGGG 1 cut(s) 288
SrfI GCCCGGGC 1 cut(s) 288
SsiI CCGC 6 cut(s) 31, 33, 61, 76, 279, 318
SspI AATATT 1 cut(s) 248
SspMI CTAG 1 cut(s) 282
StyD4I CCNGG 6 cut(s) 106, 285, 286, 299, 340, 360
StyI CCWWGG 1 cut(s) 224
TaiI ACGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 123, 173
TauI GCSGC 4 cut(s) 33, 78, 281, 320
TfiI GAWTC 1 cut(s) 114
TseI GCWGC 1 cut(s) 309
TspMI CCCGGG 1 cut(s) 286
Van91I CCANNNNNTGG 1 cut(s) 78
VpaK11BI GGWCC 2 cut(s) 11, 81
XmaI CCCGGG 1 cut(s) 286
XspI CTAG 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.