Rroxscaffold_40G00447710

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000040
OG0000098
Physical Location & Seq
Forward (+)
61706 .. 63959
2254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_40G00447710.1

Sequence Viewer

Length: 1137 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGGCTGTGCTTTGGGTCCAAAAAGAGGGGCGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGTCTTCTTTCCCCGCCGATTCTCGCCAAGCCCGTTCCCTTGGCCGTGTCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGCTCACCGACAGCCGACGGGTTCGGATCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGTCGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCGCCCGCCGGACCCTACCTCCGCCGAGCCGTTTCCGTGATCCGCACCGACGGCCGCTCCGCCCGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGCCTCGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAACGGCCGAACGGGGAGCCCGCAGCCGTTACCAGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCGTGCCGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGCCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTACTCGGCCTCTCGCCCGTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

378

Amino Acids

41.12

Weight (kDa)

11.49

Isoelectric Point (pI)

65.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 903
Acc36I ACCTGC 1 cut(s) 482
AccBSI CCGCTC 2 cut(s) 343, 669
AccI GTMKAC 2 cut(s) 269, 894
AccII CGCG 8 cut(s) 333, 352, 596, 709, 764, 871, 891, 1099
AccIII TCCGGA 1 cut(s) 557
AclI AACGTT 1 cut(s) 92
AclWI GGATC 5 cut(s) 23, 401, 441, 454, 646
AcoI YGGCCR 6 cut(s) 231, 323, 664, 747, 807, 932
AcyI GRCGYC 1 cut(s) 900
AfaI GTAC 3 cut(s) 257, 529, 1103
AfiI CCNNNNNNNGG 9 cut(s) 49, 74, 321, 325, 332, 620, 749, 785, 930
AflII CTTAAG 1 cut(s) 767
AgsI TTSAA 4 cut(s) 278, 567, 1052, 1075
AhdI GACNNNNNGTC 1 cut(s) 492
AjiI CACGTC 1 cut(s) 600
AluBI AGCT 3 cut(s) 183, 361, 370
AluI AGCT 3 cut(s) 183, 361, 370
Alw21I GWGCWC 2 cut(s) 610, 842
Alw26I GTCTC 3 cut(s) 502, 857, 907
AlwI GGATC 5 cut(s) 23, 401, 441, 454, 646
Ama87I CYCGRG 5 cut(s) 263, 283, 362, 435, 964
Aor13HI TCCGGA 1 cut(s) 557
AoxI GGCC 9 cut(s) 231, 323, 570, 664, 726, 747, 807, 932, 1118
ApeKI GCWGC 5 cut(s) 358, 367, 420, 697, 825
AspLEI GCGC 6 cut(s) 583, 711, 766, 774, 871, 1015
AspS9I GGNCC 8 cut(s) 40, 399, 552, 570, 623, 726, 955, 979
AsuC2I CCSGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
AsuHPI GGTGA 2 cut(s) 364, 492
AvaI CYCGRG 5 cut(s) 263, 283, 362, 435, 964
AvaII GGWCC 6 cut(s) 40, 399, 552, 623, 955, 979
BaeGI GKGCMC 2 cut(s) 61, 411
BamHI GGATCC 1 cut(s) 446
BanII GRGCYC 1 cut(s) 823
BbsI GAAGAC 1 cut(s) 185
Bbv12I GWGCWC 2 cut(s) 610, 842
BbvI GCAGC 5 cut(s) 370, 379, 432, 709, 837
BccI CCATC 2 cut(s) 783, 1035
BceAI ACGGC 7 cut(s) 218, 626, 679, 762, 813, 822, 882
BcnI CCSGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
BcoDI GTCTC 3 cut(s) 502, 857, 907
BfaI CTAG 2 cut(s) 173, 791
BfoI RGCGCY 1 cut(s) 775
BfrI CTTAAG 1 cut(s) 767
BfuAI ACCTGC 1 cut(s) 482
BglI GCCNNNNNGGC 3 cut(s) 578, 746, 866
Bme1390I CCNGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
Bme18I GGWCC 6 cut(s) 40, 399, 552, 623, 955, 979
BmeRI GACNNNNNGTC 1 cut(s) 492
BmeT110I CYCGRG 5 cut(s) 263, 283, 362, 435, 964
BmgBI CACGTC 1 cut(s) 600
BmgT120I GGNCC 8 cut(s) 40, 399, 552, 570, 623, 726, 955, 979
BmiI GGNNCC 7 cut(s) 41, 129, 400, 401, 448, 625, 820
BmrFI CCNGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
BmrI ACTGGG 1 cut(s) 304
BmsI GCATC 3 cut(s) 505, 837, 1024
BmuI ACTGGG 1 cut(s) 304
BoxI GACNNNNGTC 1 cut(s) 175
BpiI GAAGAC 1 cut(s) 185
BplI GAGNNNNNCTC 2 cut(s) 167, 199
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
BsaHI GRCGYC 1 cut(s) 900
BsaI GGTCTC 1 cut(s) 502
BsaWI WCCGGW 1 cut(s) 557
BsaXI ACNNNNNCTCC 6 cut(s) 615, 645, 653, 683, 887, 917
Bsc4I CCNNNNNNNGG 9 cut(s) 49, 74, 321, 325, 332, 620, 749, 785, 930
Bse118I RCCGGY 4 cut(s) 25, 325, 533, 749
Bse1I ACTGG 1 cut(s) 310
BseAI TCCGGA 1 cut(s) 557
BseGI GGATG 3 cut(s) 775, 1000, 1027
BseLI CCNNNNNNNGG 9 cut(s) 49, 74, 321, 325, 332, 620, 749, 785, 930
BseNI ACTGG 1 cut(s) 310
BseSI GKGCMC 2 cut(s) 61, 411
BseX3I CGGCCG 4 cut(s) 323, 664, 747, 807
BseXI GCAGC 5 cut(s) 370, 379, 432, 709, 837
BseYI CCCAGC 1 cut(s) 410
Bsh1236I CGCG 8 cut(s) 333, 352, 596, 709, 764, 871, 891, 1099
Bsh1285I CGRYCG 8 cut(s) 273, 326, 534, 667, 704, 750, 810, 1008
BshFI GGCC 9 cut(s) 233, 325, 572, 666, 728, 749, 809, 934, 1120
BsiEI CGRYCG 8 cut(s) 273, 326, 534, 667, 704, 750, 810, 1008
BsiHKAI GWGCWC 2 cut(s) 610, 842
BsiHKCI CYCGRG 5 cut(s) 263, 283, 362, 435, 964
BslFI GGGAC 2 cut(s) 302, 412
BslI CCNNNNNNNGG 9 cut(s) 49, 74, 321, 325, 332, 620, 749, 785, 930
BsmAI GTCTC 3 cut(s) 502, 857, 907
BsmBI CGTCTC 2 cut(s) 857, 907
BsmFI GGGAC 2 cut(s) 302, 412
BsnI GGCC 9 cut(s) 233, 325, 572, 666, 728, 749, 809, 934, 1120
Bso31I GGTCTC 1 cut(s) 502
BsoBI CYCGRG 5 cut(s) 263, 283, 362, 435, 964
Bsp1286I GDGCHC 5 cut(s) 61, 411, 610, 823, 842
Bsp13I TCCGGA 1 cut(s) 557
Bsp143I GATC 5 cut(s) 15, 393, 446, 651, 886
BspANI GGCC 9 cut(s) 233, 325, 572, 666, 728, 749, 809, 934, 1120
BspEI TCCGGA 1 cut(s) 557
BspFNI CGCG 8 cut(s) 333, 352, 596, 709, 764, 871, 891, 1099
BspLI GGNNCC 7 cut(s) 41, 129, 400, 401, 448, 625, 820
BspMI ACCTGC 1 cut(s) 482
BspPI GGATC 5 cut(s) 23, 401, 441, 454, 646
BspQI GCTCTTC 1 cut(s) 615
BspTI CTTAAG 1 cut(s) 767
BspTNI GGTCTC 1 cut(s) 502
BsrBI CCGCTC 2 cut(s) 343, 669
BsrFI RCCGGY 4 cut(s) 25, 325, 533, 749
BsrI ACTGG 1 cut(s) 310
BssAI RCCGGY 4 cut(s) 25, 325, 533, 749
BssMI GATC 5 cut(s) 15, 393, 446, 651, 886
BssNI GRCGYC 1 cut(s) 900
BssT1I CCWWGG 2 cut(s) 228, 503
Bst4CI ACNGT 3 cut(s) 274, 955, 994
Bst6I CTCTTC 1 cut(s) 615
BstACI GRCGYC 1 cut(s) 900
BstAFI CTTAAG 1 cut(s) 767
BstDSI CCRYGG 2 cut(s) 350, 906
BstF5I GGATG 3 cut(s) 775, 1000, 1027
BstFNI CGCG 8 cut(s) 333, 352, 596, 709, 764, 871, 891, 1099
BstH2I RGCGCY 1 cut(s) 775
BstHHI GCGC 6 cut(s) 583, 711, 766, 774, 871, 1015
BstKTI GATC 5 cut(s) 18, 396, 449, 654, 889
BstMAI GTCTC 3 cut(s) 502, 857, 907
BstMBI GATC 5 cut(s) 15, 393, 446, 651, 886
BstMCI CGRYCG 8 cut(s) 273, 326, 534, 667, 704, 750, 810, 1008
BstPAI GACNNNNGTC 1 cut(s) 175
BstSCI CCNGG 7 cut(s) 11, 282, 283, 320, 575, 674, 923
BstSLI GKGCMC 2 cut(s) 61, 411
BstUI CGCG 8 cut(s) 333, 352, 596, 709, 764, 871, 891, 1099
BstV1I GCAGC 5 cut(s) 370, 379, 432, 709, 837
BstV2I GAAGAC 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 446
BstYI RGATCY 1 cut(s) 446
BstZI CGGCCG 4 cut(s) 323, 664, 747, 807
BsuRI GGCC 9 cut(s) 233, 325, 572, 666, 728, 749, 809, 934, 1120
BtgI CCRYGG 2 cut(s) 350, 906
BtgZI GCGATG 1 cut(s) 1001
BtrI CACGTC 1 cut(s) 600
BtsCI GGATG 3 cut(s) 775, 1000, 1027
BveI ACCTGC 1 cut(s) 482
CfoI GCGC 6 cut(s) 583, 711, 766, 774, 871, 1015
Cfr10I RCCGGY 4 cut(s) 25, 325, 533, 749
Cfr13I GGNCC 8 cut(s) 40, 399, 552, 570, 623, 726, 955, 979
Cfr42I CCGCGG 1 cut(s) 353
Cfr9I CCCGGG 1 cut(s) 283
CpoI CGGWCCG 1 cut(s) 979
CseI GACGC 1 cut(s) 880
Csp6I GTAC 3 cut(s) 256, 528, 1102
CspI CGGWCCG 1 cut(s) 979
CviAII CATG 1 cut(s) 884
CviQI GTAC 3 cut(s) 256, 528, 1102
DpnI GATC 5 cut(s) 17, 395, 448, 653, 888
DpnII GATC 5 cut(s) 15, 393, 446, 651, 886
DriI GACNNNNNGTC 1 cut(s) 492
EaeI YGGCCR 6 cut(s) 231, 323, 664, 747, 807, 932
EagI CGGCCG 4 cut(s) 323, 664, 747, 807
Eam1104I CTCTTC 1 cut(s) 615
Eam1105I GACNNNNNGTC 1 cut(s) 492
EarI CTCTTC 1 cut(s) 615
EciI GGCGGA 4 cut(s) 603, 623, 661, 992
EclXI CGGCCG 4 cut(s) 323, 664, 747, 807
Eco130I CCWWGG 2 cut(s) 228, 503
Eco24I GRGCYC 1 cut(s) 823
Eco31I GGTCTC 1 cut(s) 502
Eco47I GGWCC 6 cut(s) 40, 399, 552, 623, 955, 979
Eco52I CGGCCG 4 cut(s) 323, 664, 747, 807
Eco88I CYCGRG 5 cut(s) 263, 283, 362, 435, 964
EcoO109I RGGNCCY 1 cut(s) 399
EcoT14I CCWWGG 2 cut(s) 228, 503
EcoT38I GRGCYC 1 cut(s) 823
ErhI CCWWGG 2 cut(s) 228, 503
Esp3I CGTCTC 2 cut(s) 857, 907
FaeI CATG 1 cut(s) 887
FaiI YATR 5 cut(s) 138, 524, 755, 885, 914
FaqI GGGAC 2 cut(s) 302, 412
FatI CATG 1 cut(s) 883
FauI CCCGC 6 cut(s) 30, 69, 210, 348, 625, 830
FblI GTMKAC 2 cut(s) 269, 894
FokI GGATG 3 cut(s) 762, 987, 1014
FriOI GRGCYC 1 cut(s) 823
FspBI CTAG 2 cut(s) 173, 791
GlaI GCGC 6 cut(s) 582, 710, 765, 773, 870, 1014
GsaI CCCAGC 1 cut(s) 414
HaeII RGCGCY 1 cut(s) 775
HaeIII GGCC 9 cut(s) 233, 325, 572, 666, 728, 749, 809, 934, 1120
HgaI GACGC 1 cut(s) 880
HhaI GCGC 6 cut(s) 583, 711, 766, 774, 871, 1015
Hin1I GRCGYC 1 cut(s) 900
Hin1II CATG 1 cut(s) 887
Hin6I GCGC 6 cut(s) 581, 709, 764, 772, 869, 1013
HinP1I GCGC 6 cut(s) 581, 709, 764, 772, 869, 1013
HincII GTYRAC 2 cut(s) 270, 895
HindII GTYRAC 2 cut(s) 270, 895
HinfI GANTC 8 cut(s) 70, 176, 208, 242, 266, 797, 967, 1064
HphI GGTGA 2 cut(s) 364, 492
Hpy166II GTNNAC 4 cut(s) 270, 500, 895, 958
Hpy188I TCNGA 5 cut(s) 69, 170, 241, 393, 1005
Hpy188III TCNNGA 4 cut(s) 397, 435, 558, 1041
Hpy8I GTNNAC 4 cut(s) 270, 500, 895, 958
Hpy99I CGWCG 7 cut(s) 387, 601, 665, 748, 896, 899, 902
HpyAV CCTTC 2 cut(s) 118, 292
HpyCH4III ACNGT 3 cut(s) 274, 955, 994
HpyCH4IV ACGT 3 cut(s) 92, 599, 900
HpyCH4V TGCA 1 cut(s) 697
HpySE526I ACGT 3 cut(s) 92, 599, 900
Hsp92I GRCGYC 1 cut(s) 900
Hsp92II CATG 1 cut(s) 887
HspAI GCGC 6 cut(s) 581, 709, 764, 772, 869, 1013
KflI GGGWCCC 1 cut(s) 399
Kpn2I TCCGGA 1 cut(s) 557
KroI GCCGGC 2 cut(s) 25, 325
KroNI GCCGGC 2 cut(s) 27, 327
KspI CCGCGG 1 cut(s) 353
Kzo9I GATC 5 cut(s) 15, 393, 446, 651, 886
LguI GCTCTTC 1 cut(s) 615
LmnI GCTCC 4 cut(s) 133, 301, 674, 818
Lsp1109I GCAGC 5 cut(s) 370, 379, 432, 709, 837
LweI GCATC 3 cut(s) 505, 837, 1024
MaeI CTAG 2 cut(s) 173, 791
MaeII ACGT 3 cut(s) 92, 599, 900
MaeIII GTNAC 5 cut(s) 440, 758, 830, 949, 988
MalI GATC 5 cut(s) 17, 395, 448, 653, 888
MbiI CCGCTC 2 cut(s) 343, 669
MboI GATC 5 cut(s) 15, 393, 446, 651, 886
MboII GAAGA 2 cut(s) 185, 602
MflI RGATCY 1 cut(s) 446
MhlI GDGCHC 5 cut(s) 61, 411, 610, 823, 842
MluCI AATT 1 cut(s) 1046
MlyI GAGTC 4 cut(s) 185, 275, 976, 1058
MmeI TCCRAC 3 cut(s) 148, 219, 1028
MroI TCCGGA 1 cut(s) 557
MroNI GCCGGC 2 cut(s) 25, 325
MseI TTAA 2 cut(s) 95, 768
MslI CAYNNNNRTG 1 cut(s) 845
MspA1I CMGCKG 1 cut(s) 352
MspCI CTTAAG 1 cut(s) 767
MspR9I CCNGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
MvnI CGCG 8 cut(s) 333, 352, 596, 709, 764, 871, 891, 1099
NaeI GCCGGC 2 cut(s) 27, 327
NciI CCSGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
NdeII GATC 5 cut(s) 15, 393, 446, 651, 886
NgoMIV GCCGGC 2 cut(s) 25, 325
NlaIII CATG 1 cut(s) 887
NlaIV GGNNCC 7 cut(s) 41, 129, 400, 401, 448, 625, 820
NmeAIII GCCGAG 4 cut(s) 662, 710, 886, 1096
NmuCI GTSAC 2 cut(s) 758, 988
PaeR7I CTCGAG 1 cut(s) 362
PciSI GCTCTTC 1 cut(s) 615
PcsI WCGNNNNNNNCGW 3 cut(s) 219, 402, 848
PdiI GCCGGC 2 cut(s) 27, 327
PfeI GAWTC 4 cut(s) 70, 208, 242, 797
PflFI GACNNNGTC 1 cut(s) 899
PleI GAGTC 4 cut(s) 184, 274, 975, 1058
PpsI GAGTC 4 cut(s) 184, 274, 975, 1058
PpuMI RGGWCCY 1 cut(s) 399
PshAI GACNNNNGTC 1 cut(s) 175
Psp1406I AACGTT 1 cut(s) 92
Psp5II RGGWCCY 1 cut(s) 399
PspFI CCCAGC 1 cut(s) 410
PspN4I GGNNCC 7 cut(s) 41, 129, 400, 401, 448, 625, 820
PspPI GGNCC 8 cut(s) 40, 399, 552, 570, 623, 726, 955, 979
PspPPI RGGWCCY 1 cut(s) 399
PspXI VCTCGAGB 1 cut(s) 362
PsuI RGATCY 1 cut(s) 446
PsyI GACNNNGTC 1 cut(s) 899
RsaI GTAC 3 cut(s) 257, 529, 1103
RsaNI GTAC 3 cut(s) 256, 528, 1102
RseI CAYNNNNRTG 1 cut(s) 845
Rsr2I CGGWCCG 1 cut(s) 979
RsrII CGGWCCG 1 cut(s) 979
SacII CCGCGG 1 cut(s) 353
SalI GTCGAC 2 cut(s) 268, 893
SapI GCTCTTC 1 cut(s) 615
SaqAI TTAA 2 cut(s) 95, 768
Sau3AI GATC 5 cut(s) 15, 393, 446, 651, 886
Sau96I GGNCC 8 cut(s) 40, 399, 552, 570, 623, 726, 955, 979
SchI GAGTC 4 cut(s) 185, 275, 976, 1058
ScrFI CCNGG 7 cut(s) 13, 284, 285, 322, 577, 676, 925
SduI GDGCHC 5 cut(s) 61, 411, 610, 823, 842
SfaNI GCATC 3 cut(s) 505, 837, 1024
Sfr274I CTCGAG 1 cut(s) 362
Sfr303I CCGCGG 1 cut(s) 353
SgrBI CCGCGG 1 cut(s) 353
SgrDI CGTCGACG 1 cut(s) 893
SinI GGWCC 6 cut(s) 40, 399, 552, 623, 955, 979
SlaI CTCGAG 1 cut(s) 362
SmaI CCCGGG 1 cut(s) 285
SmiMI CAYNNNNRTG 1 cut(s) 845
SmlI CTYRAG 3 cut(s) 149, 362, 767
SmoI CTYRAG 3 cut(s) 149, 362, 767
Sse9I AATT 1 cut(s) 1046
SspMI CTAG 2 cut(s) 173, 791
StyD4I CCNGG 7 cut(s) 11, 282, 283, 320, 575, 674, 923
StyI CCWWGG 2 cut(s) 228, 503
TaaI ACNGT 3 cut(s) 274, 955, 994
TaiI ACGT 3 cut(s) 95, 602, 903
TaqI TCGA 4 cut(s) 269, 363, 894, 970
TaqII GACCGA 2 cut(s) 540, 1022
TasI AATT 1 cut(s) 1046
TfiI GAWTC 4 cut(s) 70, 208, 242, 797
Tru1I TTAA 2 cut(s) 95, 768
Tru9I TTAA 2 cut(s) 95, 768
TseFI GTSAC 2 cut(s) 758, 988
TseI GCWGC 5 cut(s) 358, 367, 420, 697, 825
Tsp45I GTSAC 2 cut(s) 758, 988
TspDTI ATGAA 1 cut(s) 1075
TspGWI ACGGA 6 cut(s) 90, 243, 304, 459, 637, 937
TspMI CCCGGG 1 cut(s) 283
Tth111I GACNNNGTC 1 cut(s) 899
Vha464I CTTAAG 1 cut(s) 767
VpaK11BI GGWCC 6 cut(s) 40, 399, 552, 623, 955, 979
XhoI CTCGAG 1 cut(s) 362
XmaI CCCGGG 1 cut(s) 283
XmiI GTMKAC 2 cut(s) 269, 894
XspI CTAG 2 cut(s) 173, 791
ZraI GACGTC 1 cut(s) 901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.