Rroxscaffold_83G00450980

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000083
OG0000098
Physical Location & Seq
Forward (+)
13720 .. 15006
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_83G00450980.1

Sequence Viewer

Length: 777 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTATCCCCGTGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACGTATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCGTGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGGAATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

258

Amino Acids

29.43

Weight (kDa)

10.85

Isoelectric Point (pI)

64.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 123
AatII GACGTC 1 cut(s) 724
Acc36I ACCTGC 1 cut(s) 123
AccBSI CCGCTC 1 cut(s) 358
AccI GTMKAC 1 cut(s) 284
AccII CGCG 3 cut(s) 348, 367, 613
AccIII TCCGGA 1 cut(s) 573
AclI AACGTT 1 cut(s) 738
AclWI GGATC 4 cut(s) 34, 189, 457, 470
AcoI YGGCCR 2 cut(s) 338, 652
AcsI RAATTY 1 cut(s) 770
AcyI GRCGYC 1 cut(s) 721
AfaI GTAC 2 cut(s) 271, 545
AfiI CCNNNNNNNGG 9 cut(s) 217, 243, 336, 340, 347, 637, 650, 760, 766
AgsI TTSAA 2 cut(s) 293, 583
AjiI CACGTC 2 cut(s) 617, 757
AluBI AGCT 2 cut(s) 100, 376
AluI AGCT 2 cut(s) 100, 376
Alw21I GWGCWC 2 cut(s) 102, 627
Alw26I GTCTC 2 cut(s) 518, 728
AlwI GGATC 4 cut(s) 34, 189, 457, 470
Ama87I CYCGRG 4 cut(s) 298, 377, 451, 705
Aor13HI TCCGGA 1 cut(s) 573
AoxI GGCC 4 cut(s) 338, 586, 652, 709
ApeKI GCWGC 3 cut(s) 58, 373, 436
ApoI RAATTY 1 cut(s) 770
AspLEI GCGC 1 cut(s) 599
AspS9I GGNCC 7 cut(s) 208, 409, 415, 568, 586, 640, 710
AsuC2I CCSGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
AsuHPI GGTGA 2 cut(s) 379, 508
AvaI CYCGRG 4 cut(s) 298, 377, 451, 705
AvaII GGWCC 5 cut(s) 208, 409, 415, 568, 640
BaeGI GKGCMC 2 cut(s) 230, 427
BamHI GGATCC 1 cut(s) 462
BanII GRGCYC 1 cut(s) 102
BbsI GAAGAC 1 cut(s) 163
Bbv12I GWGCWC 2 cut(s) 102, 627
BbvI GCAGC 3 cut(s) 45, 385, 448
BceAI ACGGC 2 cut(s) 644, 728
BcnI CCSGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
BcoDI GTCTC 2 cut(s) 518, 728
BfuAI ACCTGC 1 cut(s) 123
BglI GCCNNNNNGGC 1 cut(s) 594
BisI GCNGC 9 cut(s) 59, 69, 140, 349, 365, 374, 437, 589, 635
BlsI GCNGC 9 cut(s) 60, 70, 141, 350, 366, 375, 438, 590, 636
Bme1390I CCNGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
Bme18I GGWCC 5 cut(s) 208, 409, 415, 568, 640
BmeT110I CYCGRG 4 cut(s) 298, 377, 451, 705
BmgBI CACGTC 2 cut(s) 617, 757
BmgT120I GGNCC 7 cut(s) 208, 409, 415, 568, 586, 640, 710
BmiI GGNNCC 7 cut(s) 209, 410, 416, 417, 464, 642, 712
BmrFI CCNGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
BmrI ACTGGG 1 cut(s) 319
BmsI GCATC 1 cut(s) 521
BmuI ACTGGG 1 cut(s) 319
BpiI GAAGAC 1 cut(s) 163
BpuMI CCSGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
BsaHI GRCGYC 1 cut(s) 721
BsaI GGTCTC 1 cut(s) 518
BsaJI CCNNGG 8 cut(s) 298, 335, 365, 452, 519, 592, 666, 706
BsaWI WCCGGW 2 cut(s) 573, 601
BsaXI ACNNNNNCTCC 2 cut(s) 632, 662
Bsc4I CCNNNNNNNGG 9 cut(s) 217, 243, 336, 340, 347, 637, 650, 760, 766
Bse118I RCCGGY 2 cut(s) 340, 549
Bse1I ACTGG 2 cut(s) 273, 325
BseAI TCCGGA 1 cut(s) 573
BseDI CCNNGG 8 cut(s) 298, 335, 365, 452, 519, 592, 666, 706
BseLI CCNNNNNNNGG 9 cut(s) 217, 243, 336, 340, 347, 637, 650, 760, 766
BseNI ACTGG 2 cut(s) 273, 325
BseSI GKGCMC 2 cut(s) 230, 427
BseX3I CGGCCG 2 cut(s) 338, 652
BseXI GCAGC 3 cut(s) 45, 385, 448
BseYI CCCAGC 2 cut(s) 144, 426
Bsh1236I CGCG 3 cut(s) 348, 367, 613
Bsh1285I CGRYCG 4 cut(s) 288, 341, 550, 655
BshFI GGCC 4 cut(s) 340, 588, 654, 711
BsiEI CGRYCG 4 cut(s) 288, 341, 550, 655
BsiHKAI GWGCWC 2 cut(s) 102, 627
BsiHKCI CYCGRG 4 cut(s) 298, 377, 451, 705
BslFI GGGAC 4 cut(s) 317, 422, 428, 743
BslI CCNNNNNNNGG 9 cut(s) 217, 243, 336, 340, 347, 637, 650, 760, 766
BsmAI GTCTC 2 cut(s) 518, 728
BsmBI CGTCTC 1 cut(s) 728
BsmFI GGGAC 4 cut(s) 317, 422, 428, 743
BsnI GGCC 4 cut(s) 340, 588, 654, 711
Bso31I GGTCTC 1 cut(s) 518
BsoBI CYCGRG 4 cut(s) 298, 377, 451, 705
Bsp1286I GDGCHC 4 cut(s) 102, 230, 427, 627
Bsp13I TCCGGA 1 cut(s) 573
Bsp143I GATC 3 cut(s) 26, 181, 462
BspANI GGCC 4 cut(s) 340, 588, 654, 711
BspEI TCCGGA 1 cut(s) 573
BspFNI CGCG 3 cut(s) 348, 367, 613
BspLI GGNNCC 7 cut(s) 209, 410, 416, 417, 464, 642, 712
BspMI ACCTGC 1 cut(s) 123
BspPI GGATC 4 cut(s) 34, 189, 457, 470
BspQI GCTCTTC 2 cut(s) 4, 632
BspTNI GGTCTC 1 cut(s) 518
BsrBI CCGCTC 1 cut(s) 358
BsrFI RCCGGY 2 cut(s) 340, 549
BsrI ACTGG 2 cut(s) 273, 325
BssAI RCCGGY 2 cut(s) 340, 549
BssECI CCNNGG 8 cut(s) 298, 335, 365, 452, 519, 592, 666, 706
BssMI GATC 3 cut(s) 26, 181, 462
BssNI GRCGYC 1 cut(s) 721
BssT1I CCWWGG 1 cut(s) 519
Bst4CI ACNGT 1 cut(s) 289
Bst6I CTCTTC 3 cut(s) 4, 632, 706
BstACI GRCGYC 1 cut(s) 721
BstC8I GCNNGC 5 cut(s) 189, 342, 346, 509, 677
BstDEI CTNAG 1 cut(s) 106
BstDSI CCRYGG 2 cut(s) 365, 666
BstFNI CGCG 3 cut(s) 348, 367, 613
BstHHI GCGC 1 cut(s) 599
BstKTI GATC 3 cut(s) 29, 184, 465
BstMAI GTCTC 2 cut(s) 518, 728
BstMBI GATC 3 cut(s) 26, 181, 462
BstMCI CGRYCG 4 cut(s) 288, 341, 550, 655
BstSCI CCNGG 7 cut(s) 177, 297, 298, 335, 411, 591, 759
BstSLI GKGCMC 2 cut(s) 230, 427
BstUI CGCG 3 cut(s) 348, 367, 613
BstV1I GCAGC 3 cut(s) 45, 385, 448
BstV2I GAAGAC 1 cut(s) 163
BstX2I RGATCY 1 cut(s) 462
BstYI RGATCY 1 cut(s) 462
BstZI CGGCCG 2 cut(s) 338, 652
BsuRI GGCC 4 cut(s) 340, 588, 654, 711
BtgI CCRYGG 2 cut(s) 365, 666
BtrI CACGTC 2 cut(s) 617, 757
BtsI GCAGTG 2 cut(s) 204, 230
BtsIMutI CAGTG 2 cut(s) 204, 230
BveI ACCTGC 1 cut(s) 123
Cac8I GCNNGC 5 cut(s) 189, 342, 346, 509, 677
CfoI GCGC 1 cut(s) 599
Cfr10I RCCGGY 2 cut(s) 340, 549
Cfr13I GGNCC 7 cut(s) 208, 409, 415, 568, 586, 640, 710
Cfr42I CCGCGG 1 cut(s) 368
Cfr9I CCCGGG 1 cut(s) 298
Csp6I GTAC 2 cut(s) 270, 544
CviQI GTAC 2 cut(s) 270, 544
DdeI CTNAG 1 cut(s) 106
DpnI GATC 3 cut(s) 28, 183, 464
DpnII GATC 3 cut(s) 26, 181, 462
EaeI YGGCCR 2 cut(s) 338, 652
EagI CGGCCG 2 cut(s) 338, 652
Eam1104I CTCTTC 3 cut(s) 4, 632, 706
EarI CTCTTC 3 cut(s) 4, 632, 706
EciI GGCGGA 1 cut(s) 164
Ecl136II GAGCTC 1 cut(s) 100
EclXI CGGCCG 2 cut(s) 338, 652
Eco130I CCWWGG 1 cut(s) 519
Eco24I GRGCYC 1 cut(s) 102
Eco31I GGTCTC 1 cut(s) 518
Eco47I GGWCC 5 cut(s) 208, 409, 415, 568, 640
Eco52I CGGCCG 2 cut(s) 338, 652
Eco53kI GAGCTC 1 cut(s) 100
Eco88I CYCGRG 4 cut(s) 298, 377, 451, 705
EcoICRI GAGCTC 1 cut(s) 100
EcoO109I RGGNCCY 2 cut(s) 415, 710
EcoT14I CCWWGG 1 cut(s) 519
EcoT38I GRGCYC 1 cut(s) 102
ErhI CCWWGG 1 cut(s) 519
Esp3I CGTCTC 1 cut(s) 728
FaiI YATR 3 cut(s) 47, 135, 540
FalI AAGNNNNNCTT 2 cut(s) 186, 218
FaqI GGGAC 4 cut(s) 317, 422, 428, 743
FauI CCCGC 4 cut(s) 196, 238, 363, 722
FblI GTMKAC 1 cut(s) 284
Fnu4HI GCNGC 9 cut(s) 59, 69, 140, 349, 365, 374, 437, 589, 635
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 9 cut(s) 59, 69, 140, 349, 365, 374, 437, 589, 635
GlaI GCGC 1 cut(s) 598
GluI GCNGC 9 cut(s) 59, 69, 140, 349, 365, 374, 437, 589, 635
GsaI CCCAGC 2 cut(s) 148, 430
HaeIII GGCC 4 cut(s) 340, 588, 654, 711
HhaI GCGC 1 cut(s) 599
Hin1I GRCGYC 1 cut(s) 721
Hin6I GCGC 1 cut(s) 597
HinP1I GCGC 1 cut(s) 597
HincII GTYRAC 2 cut(s) 285, 748
HindII GTYRAC 2 cut(s) 285, 748
HinfI GANTC 4 cut(s) 239, 256, 281, 729
HphI GGTGA 2 cut(s) 379, 508
Hpy166II GTNNAC 4 cut(s) 285, 387, 516, 748
Hpy188I TCNGA 4 cut(s) 238, 255, 280, 728
Hpy188III TCNNGA 5 cut(s) 407, 451, 574, 705, 767
Hpy8I GTNNAC 4 cut(s) 285, 387, 516, 748
Hpy99I CGWCG 4 cut(s) 44, 402, 618, 723
HpyAV CCTTC 2 cut(s) 17, 307
HpyCH4III ACNGT 1 cut(s) 289
HpyCH4IV ACGT 6 cut(s) 39, 131, 616, 721, 738, 756
HpyF3I CTNAG 1 cut(s) 106
HpySE526I ACGT 6 cut(s) 39, 131, 616, 721, 738, 756
Hsp92I GRCGYC 1 cut(s) 721
HspAI GCGC 1 cut(s) 597
KflI GGGWCCC 1 cut(s) 415
Kpn2I TCCGGA 1 cut(s) 573
KroI GCCGGC 1 cut(s) 340
KroNI GCCGGC 1 cut(s) 342
KspI CCGCGG 1 cut(s) 368
Kzo9I GATC 3 cut(s) 26, 181, 462
LguI GCTCTTC 2 cut(s) 4, 632
LmnI GCTCC 1 cut(s) 316
Lsp1109I GCAGC 3 cut(s) 45, 385, 448
LweI GCATC 1 cut(s) 521
MaeII ACGT 6 cut(s) 39, 131, 616, 721, 738, 756
MaeIII GTNAC 1 cut(s) 456
MalI GATC 3 cut(s) 28, 183, 464
MbiI CCGCTC 1 cut(s) 358
MboI GATC 3 cut(s) 26, 181, 462
MboII GAAGA 4 cut(s) 21, 163, 619, 693
MflI RGATCY 1 cut(s) 462
MhlI GDGCHC 4 cut(s) 102, 230, 427, 627
MluCI AATT 1 cut(s) 770
MlyI GAGTC 2 cut(s) 290, 723
MmeI TCCRAC 1 cut(s) 751
MnlI CCTC 7 cut(s) 211, 244, 442, 447, 581, 658, 701
MroI TCCGGA 1 cut(s) 573
MroNI GCCGGC 1 cut(s) 340
MseI TTAA 3 cut(s) 128, 683, 775
MspA1I CMGCKG 1 cut(s) 367
MspR9I CCNGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
MvnI CGCG 3 cut(s) 348, 367, 613
NaeI GCCGGC 1 cut(s) 342
NciI CCSGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
NdeII GATC 3 cut(s) 26, 181, 462
NgoMIV GCCGGC 1 cut(s) 340
NlaIV GGNNCC 7 cut(s) 209, 410, 416, 417, 464, 642, 712
NmeAIII GCCGAG 1 cut(s) 680
PaeR7I CTCGAG 1 cut(s) 377
PaqCI CACCTGC 1 cut(s) 123
PciSI GCTCTTC 2 cut(s) 4, 632
PdiI GCCGGC 1 cut(s) 342
PfeI GAWTC 2 cut(s) 239, 256
PflFI GACNNNGTC 1 cut(s) 167
PkrI GCNGC 9 cut(s) 60, 70, 141, 350, 366, 375, 438, 590, 636
PleI GAGTC 2 cut(s) 289, 723
PpsI GAGTC 2 cut(s) 289, 723
PpuMI RGGWCCY 1 cut(s) 415
Psp124BI GAGCTC 1 cut(s) 102
Psp1406I AACGTT 1 cut(s) 738
Psp5II RGGWCCY 1 cut(s) 415
PspFI CCCAGC 2 cut(s) 144, 426
PspN4I GGNNCC 7 cut(s) 209, 410, 416, 417, 464, 642, 712
PspPI GGNCC 7 cut(s) 208, 409, 415, 568, 586, 640, 710
PspPPI RGGWCCY 1 cut(s) 415
PspXI VCTCGAGB 1 cut(s) 377
PsuI RGATCY 1 cut(s) 462
PsyI GACNNNGTC 1 cut(s) 167
RsaI GTAC 2 cut(s) 271, 545
RsaNI GTAC 2 cut(s) 270, 544
SacI GAGCTC 1 cut(s) 102
SacII CCGCGG 1 cut(s) 368
SalI GTCGAC 1 cut(s) 283
SapI GCTCTTC 2 cut(s) 4, 632
SaqAI TTAA 3 cut(s) 128, 683, 775
SatI GCNGC 9 cut(s) 59, 69, 140, 349, 365, 374, 437, 589, 635
Sau3AI GATC 3 cut(s) 26, 181, 462
Sau96I GGNCC 7 cut(s) 208, 409, 415, 568, 586, 640, 710
SchI GAGTC 2 cut(s) 290, 723
ScrFI CCNGG 7 cut(s) 179, 299, 300, 337, 413, 593, 761
SduI GDGCHC 4 cut(s) 102, 230, 427, 627
SfaNI GCATC 1 cut(s) 521
Sfr274I CTCGAG 1 cut(s) 377
Sfr303I CCGCGG 1 cut(s) 368
SgrBI CCGCGG 1 cut(s) 368
SinI GGWCC 5 cut(s) 208, 409, 415, 568, 640
SlaI CTCGAG 1 cut(s) 377
SmaI CCCGGG 1 cut(s) 300
SmlI CTYRAG 1 cut(s) 377
SmoI CTYRAG 1 cut(s) 377
Sse9I AATT 1 cut(s) 770
SstI GAGCTC 1 cut(s) 102
StyD4I CCNGG 7 cut(s) 177, 297, 298, 335, 411, 591, 759
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 1 cut(s) 289
TaiI ACGT 6 cut(s) 42, 134, 619, 724, 741, 759
TaqI TCGA 3 cut(s) 21, 284, 378
TaqII GACCGA 1 cut(s) 556
TasI AATT 1 cut(s) 770
TauI GCSGC 6 cut(s) 71, 142, 351, 367, 591, 637
TfiI GAWTC 2 cut(s) 239, 256
Tru1I TTAA 3 cut(s) 128, 683, 775
Tru9I TTAA 3 cut(s) 128, 683, 775
TscAI CASTG 2 cut(s) 204, 230
TseI GCWGC 3 cut(s) 58, 373, 436
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 5 cut(s) 257, 259, 319, 475, 655
TspMI CCCGGG 1 cut(s) 298
TspRI CASTG 2 cut(s) 204, 230
Tth111I GACNNNGTC 1 cut(s) 167
VpaK11BI GGWCC 5 cut(s) 208, 409, 415, 568, 640
XapI RAATTY 1 cut(s) 770
XhoI CTCGAG 1 cut(s) 377
XmaI CCCGGG 1 cut(s) 298
XmiI GTMKAC 1 cut(s) 284
ZraI GACGTC 1 cut(s) 722
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.