FvH4_2g29310

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000131
Physical Location & Seq
Reverse (-)
22749120 .. 22752824
3705 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29310.t1

Sequence Viewer

Length: 1260 bp
ATGGAAATGGGAGGAAGTGATGTAGCTGCTTCTACTTGTGACATAGAAACTCCATCGCAAACCAGAACGGAGAAGTTGGGAAGCGTGTCTGCCCCGTCCCCTTTGCGTTGCATCTTGTCTCCCCCGTCCCGTTTCCGTTGCATCCACCAGGTTCCTGATCGATTCCGCTGTGAACGCGAAAAGGACTACACACCTCGTGTAATCTCTATAGGCCCATATCATCATGGAAACAAATCCTTGAAGCGCATGGAAGTTCACAAAAAGAGGTACCTAGATTGTTTCATGGAGCGAAGCCATTCAAAACAGAATGATTACATAGAAAAAATAAGAGGCCAAGAAGAAGAACTGCGGAAGTGTTACACAGAGACCATTGAGCTTACCAGGGATGAATTTGTCACAATGGTTTTAGTCGATGCCATCTTCCTTATCGAGTTCTTACTTAGGTACCCGCACGGTGACTCGGAAGATAAAAATGACTACATCTTTGAAATACCAATGATGCTCCCGGATGTCCAGACTGACTTGCTGATGCTTGAAAATCAGCTTCCACTCTTCATTCTGGAGGACCTTTTCAGCCTGTACAATCCTGAGTCAGATGGAGGTGCTAAGCGGCTTTCCATAGAGTTTCTTCTTTACCAGGCCGGTGGCAGTTTCGGGGTAAAGTTGGGTAAATATTCATCCGAAGTAGAAGGGCAACATTTTGTTGATCTCTTAAGAAACCTATTGGTGGCTCCCAGGGCCGGGCCGGGCCCGGTGGCTCCTCTATTAAAAGAAAAATTTAAGGGAGAAAAAAAATCTGCAATAGCACCTAGCATTGAAAAGCTGCACCTGGCAGGAGGCAAAATTCATGGTGAGACGTCAATCCCGAACTTGTTTGCCATAAGATTCGATGATAAATGGATTCTGAAGAGCAGGATTCCGAAGAACGGGATTCTGAAGATTCCAAAATTGAAGATAAATGATTCAACGGAGCTTATACTTCGAAATTTAATTGCCTTCGAACAATGCAGTATGTCTAATCCTATCATATGTCATTATGTTATCCTCATGGATATGTTGGTGGACAGTTCAAAAGATGTGGAGTTGCTTGTTAAGCACAAAATTATTGAAAATGATCTCTTAGGTGACGATCACGAGTTGTCTAGCATGATCAACCGCCTTTCTAAGCGGATTGTGCATGTGACCCGGACAACTTCTATTATGGTGCTCTTTGTGGAAAGATGGACAAGTTCTGCAATTCGAATTGGCCCAAATGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

420

Amino Acids

47.73

Weight (kDa)

6.69

Isoelectric Point (pI)

44.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 48 - 395 1.7e-92 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 860
Acc65I GGTACC 2 cut(s) 267, 444
AccB1I GGYRCC 2 cut(s) 267, 444
AccII CGCG 1 cut(s) 177
AciI CCGC 6 cut(s) 166, 349, 449, 610, 1156, 1168
AcsI RAATTY 4 cut(s) 389, 776, 843, 985
AcuI CTGAAG 2 cut(s) 926, 956
AcyI GRCGYC 1 cut(s) 857
AdeI CACNNNGTG 1 cut(s) 197
AfaI GTAC 3 cut(s) 269, 446, 581
AfiI CCNNNNNNNGG 4 cut(s) 727, 740, 741, 926
AflII CTTAAG 1 cut(s) 712
AgsI TTSAA 9 cut(s) 241, 300, 488, 536, 818, 952, 966, 1071, 1109
AjnI CCWGG 5 cut(s) 147, 380, 636, 734, 828
AluBI AGCT 5 cut(s) 26, 376, 544, 823, 973
AluI AGCT 5 cut(s) 26, 376, 544, 823, 973
Alw21I GWGCWC 1 cut(s) 1209
Alw26I GTCTC 3 cut(s) 123, 359, 848
AoxI GGCC 7 cut(s) 211, 331, 639, 738, 743, 748, 1246
ApaI GGGCCC 1 cut(s) 752
ApeKI GCWGC 2 cut(s) 26, 823
ApoI RAATTY 4 cut(s) 389, 776, 843, 985
ArsI GACNNNNNNTTYG 2 cut(s) 467, 499
Asp700I GAANNNNTTC 1 cut(s) 295
Asp718I GGTACC 2 cut(s) 267, 444
AspLEI GCGC 1 cut(s) 246
AspS9I GGNCC 7 cut(s) 212, 565, 738, 743, 748, 749, 1247
AsuC2I CCSGG 5 cut(s) 506, 742, 747, 752, 1186
AsuHPI GGTGA 3 cut(s) 467, 863, 1136
AsuII TTCGAA 3 cut(s) 982, 999, 1240
AvaII GGWCC 1 cut(s) 565
BaeGI GKGCMC 1 cut(s) 752
BaeI ACNNNNGTAYC 2 cut(s) 428, 461
BanI GGYRCC 2 cut(s) 267, 444
BanII GRGCYC 1 cut(s) 752
BauI CACGAG 2 cut(s) 195, 1133
Bbv12I GWGCWC 1 cut(s) 1209
BbvI GCAGC 2 cut(s) 13, 810
BccI CCATC 4 cut(s) 61, 425, 590, 1215
BciT130I CCWGG 5 cut(s) 149, 382, 638, 736, 830
BclI TGATCA 1 cut(s) 1149
BcnI CCSGG 5 cut(s) 506, 742, 747, 752, 1186
BcoDI GTCTC 3 cut(s) 123, 359, 848
BfaI CTAG 3 cut(s) 272, 810, 1143
BfmI CTRYAG 1 cut(s) 207
BfrI CTTAAG 1 cut(s) 712
BisI GCNGC 3 cut(s) 27, 611, 824
BlpI GCTNAGC 1 cut(s) 606
BlsI GCNGC 3 cut(s) 28, 612, 825
Bme18I GGWCC 1 cut(s) 565
BmgT120I GGNCC 7 cut(s) 212, 565, 738, 743, 748, 749, 1247
BmiI GGNNCC 6 cut(s) 153, 269, 446, 732, 750, 759
BmsI GCATC 5 cut(s) 120, 150, 403, 489, 519
BpmI CTGGAG 1 cut(s) 581
Bpu1102I GCTNAGC 1 cut(s) 606
Bpu14I TTCGAA 3 cut(s) 982, 999, 1240
BpuMI CCSGG 5 cut(s) 506, 742, 747, 752, 1186
Bsa29I ATCGAT 1 cut(s) 160
BsaHI GRCGYC 1 cut(s) 857
BsaI GGTCTC 1 cut(s) 359
BsaJI CCNNGG 3 cut(s) 381, 734, 735
Bsc4I CCNNNNNNNGG 4 cut(s) 727, 740, 741, 926
Bse118I RCCGGY 1 cut(s) 641
BseBI CCWGG 5 cut(s) 149, 382, 638, 736, 830
BseCI ATCGAT 1 cut(s) 160
BseDI CCNNGG 3 cut(s) 381, 734, 735
BseGI GGATG 4 cut(s) 141, 391, 514, 677
BseLI CCNNNNNNNGG 4 cut(s) 727, 740, 741, 926
BseMII CTCAG 1 cut(s) 579
BseRI GAGGAG 1 cut(s) 750
BseSI GKGCMC 1 cut(s) 752
BseXI GCAGC 2 cut(s) 13, 810
BsgI GTGCAG 1 cut(s) 809
Bsh1236I CGCG 1 cut(s) 177
BshFI GGCC 7 cut(s) 213, 333, 641, 740, 745, 750, 1248
BshNI GGYRCC 2 cut(s) 267, 444
BshVI ATCGAT 1 cut(s) 160
BsiHKAI GWGCWC 1 cut(s) 1209
BsiSI CCGG 6 cut(s) 506, 642, 741, 746, 752, 1186
BslFI GGGAC 2 cut(s) 82, 112
BslI CCNNNNNNNGG 4 cut(s) 727, 740, 741, 926
BsmAI GTCTC 3 cut(s) 123, 359, 848
BsmBI CGTCTC 1 cut(s) 848
BsmFI GGGAC 2 cut(s) 82, 112
BsnI GGCC 7 cut(s) 213, 333, 641, 740, 745, 750, 1248
Bso31I GGTCTC 1 cut(s) 359
Bsp119I TTCGAA 3 cut(s) 982, 999, 1240
Bsp120I GGGCCC 1 cut(s) 748
Bsp1286I GDGCHC 2 cut(s) 752, 1209
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 5 cut(s) 157, 706, 1114, 1129, 1149
Bsp1720I GCTNAGC 1 cut(s) 606
BspACI CCGC 6 cut(s) 166, 349, 449, 610, 1156, 1168
BspANI GGCC 7 cut(s) 213, 333, 641, 740, 745, 750, 1248
BspCNI CTCAG 1 cut(s) 580
BspDI ATCGAT 1 cut(s) 160
BspFNI CGCG 1 cut(s) 177
BspLI GGNNCC 6 cut(s) 153, 269, 446, 732, 750, 759
BspQI GCTCTTC 1 cut(s) 902
BspT104I TTCGAA 3 cut(s) 982, 999, 1240
BspT107I GGYRCC 2 cut(s) 267, 444
BspTI CTTAAG 1 cut(s) 712
BspTNI GGTCTC 1 cut(s) 359
BsrFI RCCGGY 1 cut(s) 641
BsrGI TGTACA 1 cut(s) 579
BssAI RCCGGY 1 cut(s) 641
BssECI CCNNGG 3 cut(s) 381, 734, 735
BssMI GATC 5 cut(s) 157, 706, 1114, 1129, 1149
BssNI GRCGYC 1 cut(s) 857
BssSI CACGAG 2 cut(s) 195, 1133
Bst2BI CACGAG 2 cut(s) 195, 1133
Bst2UI CCWGG 5 cut(s) 149, 382, 638, 736, 830
Bst4CI ACNGT 2 cut(s) 455, 1067
Bst6I CTCTTC 2 cut(s) 557, 902
BstACI GRCGYC 1 cut(s) 857
BstAFI CTTAAG 1 cut(s) 712
BstAUI TGTACA 1 cut(s) 579
BstBI TTCGAA 3 cut(s) 982, 999, 1240
BstDEI CTNAG 5 cut(s) 440, 588, 606, 1120, 1164
BstF5I GGATG 4 cut(s) 141, 391, 514, 677
BstFNI CGCG 1 cut(s) 177
BstHHI GCGC 1 cut(s) 246
BstKTI GATC 5 cut(s) 160, 709, 1117, 1132, 1152
BstMAI GTCTC 3 cut(s) 123, 359, 848
BstMBI GATC 5 cut(s) 157, 706, 1114, 1129, 1149
BstMWI GCNNNNNNNGC 4 cut(s) 174, 737, 1093, 1174
BstNI CCWGG 5 cut(s) 149, 382, 638, 736, 830
BstNSI RCATGY 1 cut(s) 1181
BstSFI CTRYAG 1 cut(s) 207
BstSLI GKGCMC 1 cut(s) 752
BstUI CGCG 1 cut(s) 177
BstV1I GCAGC 2 cut(s) 13, 810
BstXI CCANNNNNNTGG 1 cut(s) 644
Bsu15I ATCGAT 1 cut(s) 160
BsuRI GGCC 7 cut(s) 213, 333, 641, 740, 745, 750, 1248
BsuTUI ATCGAT 1 cut(s) 160
BtgZI GCGATG 1 cut(s) 39
BtsCI GGATG 4 cut(s) 141, 391, 514, 677
CfoI GCGC 1 cut(s) 246
Cfr10I RCCGGY 1 cut(s) 641
Cfr13I GGNCC 7 cut(s) 212, 565, 738, 743, 748, 749, 1247
ClaI ATCGAT 1 cut(s) 160
CsiI ACCWGGT 1 cut(s) 147
Csp6I GTAC 3 cut(s) 268, 445, 580
CspCI CAANNNNNGTGG 2 cut(s) 1059, 1094
CviAII CATG 7 cut(s) 224, 247, 283, 848, 1048, 1147, 1178
CviQI GTAC 3 cut(s) 268, 445, 580
DdeI CTNAG 5 cut(s) 440, 588, 606, 1120, 1164
DpnI GATC 5 cut(s) 159, 708, 1116, 1131, 1151
DpnII GATC 5 cut(s) 157, 706, 1114, 1129, 1149
DraIII CACNNNGTG 1 cut(s) 197
Eam1104I CTCTTC 2 cut(s) 557, 902
EarI CTCTTC 2 cut(s) 557, 902
Eco24I GRGCYC 1 cut(s) 752
Eco31I GGTCTC 1 cut(s) 359
Eco47I GGWCC 1 cut(s) 565
Eco57I CTGAAG 2 cut(s) 926, 956
EcoO109I RGGNCCY 1 cut(s) 565
EcoRII CCWGG 5 cut(s) 147, 380, 636, 734, 828
EcoT38I GRGCYC 1 cut(s) 752
Esp3I CGTCTC 1 cut(s) 848
FaeI CATG 7 cut(s) 227, 250, 286, 851, 1051, 1150, 1181
FaqI GGGAC 2 cut(s) 82, 112
FatI CATG 7 cut(s) 223, 246, 282, 847, 1047, 1146, 1177
FauI CCCGC 1 cut(s) 456
FauNDI CATATG 1 cut(s) 1028
FbaI TGATCA 1 cut(s) 1149
Fnu4HI GCNGC 3 cut(s) 27, 611, 824
FokI GGATG 4 cut(s) 128, 398, 521, 664
FriOI GRGCYC 1 cut(s) 752
Fsp4HI GCNGC 3 cut(s) 27, 611, 824
FspBI CTAG 3 cut(s) 272, 810, 1143
GlaI GCGC 1 cut(s) 245
GluI GCNGC 3 cut(s) 27, 611, 824
GsuI CTGGAG 1 cut(s) 581
HaeIII GGCC 7 cut(s) 213, 333, 641, 740, 745, 750, 1248
HapII CCGG 6 cut(s) 506, 642, 741, 746, 752, 1186
HhaI GCGC 1 cut(s) 246
Hin1I GRCGYC 1 cut(s) 857
Hin1II CATG 7 cut(s) 227, 250, 286, 851, 1051, 1150, 1181
Hin6I GCGC 1 cut(s) 244
HinP1I GCGC 1 cut(s) 244
HinfI GANTC 9 cut(s) 162, 458, 590, 885, 901, 916, 931, 940, 962
HpaII CCGG 6 cut(s) 506, 642, 741, 746, 752, 1186
HphI GGTGA 3 cut(s) 467, 863, 1136
Hpy166II GTNNAC 3 cut(s) 173, 256, 1063
Hpy188I TCNGA 6 cut(s) 463, 595, 682, 906, 921, 936
Hpy188III TCNNGA 6 cut(s) 155, 514, 560, 587, 865, 1133
Hpy8I GTNNAC 3 cut(s) 173, 256, 1063
HpyAV CCTTC 2 cut(s) 683, 1006
HpyCH4III ACNGT 2 cut(s) 455, 1067
HpyCH4IV ACGT 1 cut(s) 857
HpyCH4V TGCA 7 cut(s) 111, 141, 800, 826, 1008, 1177, 1235
HpyF10VI GCNNNNNNNGC 4 cut(s) 174, 737, 1093, 1174
HpyF3I CTNAG 5 cut(s) 440, 588, 606, 1120, 1164
HpySE526I ACGT 1 cut(s) 857
Hsp92I GRCGYC 1 cut(s) 857
Hsp92II CATG 7 cut(s) 227, 250, 286, 851, 1051, 1150, 1181
HspAI GCGC 1 cut(s) 244
KpnI GGTACC 2 cut(s) 271, 448
Ksp22I TGATCA 1 cut(s) 1149
Kzo9I GATC 5 cut(s) 157, 706, 1114, 1129, 1149
LguI GCTCTTC 1 cut(s) 902
LmnI GCTCC 5 cut(s) 286, 507, 736, 763, 970
Lsp1109I GCAGC 2 cut(s) 13, 810
LweI GCATC 5 cut(s) 120, 150, 403, 489, 519
MabI ACCWGGT 1 cut(s) 147
MaeI CTAG 3 cut(s) 272, 810, 1143
MaeII ACGT 1 cut(s) 857
MaeIII GTNAC 6 cut(s) 38, 356, 394, 455, 1124, 1180
MalI GATC 5 cut(s) 159, 708, 1116, 1131, 1151
MboI GATC 5 cut(s) 157, 706, 1114, 1129, 1149
MhlI GDGCHC 2 cut(s) 752, 1209
MluCI AATT 9 cut(s) 389, 776, 843, 947, 985, 990, 1101, 1236, 1242
MlyI GAGTC 2 cut(s) 452, 599
MnlI CCTC 9 cut(s) 5, 204, 258, 323, 556, 593, 771, 830, 1055
MroXI GAANNNNTTC 1 cut(s) 295
MseI TTAA 5 cut(s) 713, 767, 780, 989, 1092
MslI CAYNNNNRTG 1 cut(s) 1052
MspA1I CMGCKG 1 cut(s) 168
MspCI CTTAAG 1 cut(s) 712
MspI CCGG 6 cut(s) 506, 642, 741, 746, 752, 1186
MvaI CCWGG 5 cut(s) 149, 382, 638, 736, 830
MvnI CGCG 1 cut(s) 177
MwoI GCNNNNNNNGC 4 cut(s) 174, 737, 1093, 1174
NciI CCSGG 5 cut(s) 506, 742, 747, 752, 1186
NdeI CATATG 1 cut(s) 1028
NdeII GATC 5 cut(s) 157, 706, 1114, 1129, 1149
NlaIII CATG 7 cut(s) 227, 250, 286, 851, 1051, 1150, 1181
NlaIV GGNNCC 6 cut(s) 153, 269, 446, 732, 750, 759
NmuCI GTSAC 5 cut(s) 38, 394, 455, 1124, 1180
NspI RCATGY 1 cut(s) 1181
NspV TTCGAA 3 cut(s) 982, 999, 1240
PasI CCCWGGG 1 cut(s) 735
PciSI GCTCTTC 1 cut(s) 902
PcsI WCGNNNNNNNCGW 1 cut(s) 863
PdmI GAANNNNTTC 1 cut(s) 295
PfeI GAWTC 7 cut(s) 162, 885, 901, 916, 931, 940, 962
PfoI TCCNGGA 1 cut(s) 504
PkrI GCNGC 3 cut(s) 28, 612, 825
PleI GAGTC 2 cut(s) 452, 598
PpsI GAGTC 2 cut(s) 452, 598
PpuMI RGGWCCY 1 cut(s) 565
Psp5II RGGWCCY 1 cut(s) 565
Psp6I CCWGG 5 cut(s) 147, 380, 636, 734, 828
PspGI CCWGG 5 cut(s) 147, 380, 636, 734, 828
PspN4I GGNNCC 6 cut(s) 153, 269, 446, 732, 750, 759
PspOMI GGGCCC 1 cut(s) 748
PspPI GGNCC 7 cut(s) 212, 565, 738, 743, 748, 749, 1247
PspPPI RGGWCCY 1 cut(s) 565
RsaI GTAC 3 cut(s) 269, 446, 581
RsaNI GTAC 3 cut(s) 268, 445, 580
RseI CAYNNNNRTG 1 cut(s) 1052
SapI GCTCTTC 1 cut(s) 902
SaqAI TTAA 5 cut(s) 713, 767, 780, 989, 1092
SatI GCNGC 3 cut(s) 27, 611, 824
Sau3AI GATC 5 cut(s) 157, 706, 1114, 1129, 1149
Sau96I GGNCC 7 cut(s) 212, 565, 738, 743, 748, 749, 1247
SchI GAGTC 2 cut(s) 452, 599
SduI GDGCHC 2 cut(s) 752, 1209
SexAI ACCWGGT 1 cut(s) 147
SfaNI GCATC 5 cut(s) 120, 150, 403, 489, 519
SfcI CTRYAG 1 cut(s) 207
SfuI TTCGAA 3 cut(s) 982, 999, 1240
SinI GGWCC 1 cut(s) 565
SmiMI CAYNNNNRTG 1 cut(s) 1052
SmlI CTYRAG 1 cut(s) 712
SmoI CTYRAG 1 cut(s) 712
Sse9I AATT 9 cut(s) 389, 776, 843, 947, 985, 990, 1101, 1236, 1242
SsiI CCGC 6 cut(s) 166, 349, 449, 610, 1156, 1168
SspI AATATT 1 cut(s) 674
SspMI CTAG 3 cut(s) 272, 810, 1143
TaaI ACNGT 2 cut(s) 455, 1067
TaiI ACGT 1 cut(s) 860
TaqI TCGA 7 cut(s) 160, 411, 429, 888, 982, 999, 1240
TasI AATT 9 cut(s) 389, 776, 843, 947, 985, 990, 1101, 1236, 1242
TatI WGTACW 1 cut(s) 579
TauI GCSGC 1 cut(s) 613
TfiI GAWTC 7 cut(s) 162, 885, 901, 916, 931, 940, 962
Tru1I TTAA 5 cut(s) 713, 767, 780, 989, 1092
Tru9I TTAA 5 cut(s) 713, 767, 780, 989, 1092
TseFI GTSAC 5 cut(s) 38, 394, 455, 1124, 1180
TseI GCWGC 2 cut(s) 26, 823
Tsp45I GTSAC 5 cut(s) 38, 394, 455, 1124, 1180
TspDTI ATGAA 5 cut(s) 271, 402, 544, 666, 836
TspGWI ACGGA 3 cut(s) 83, 125, 983
Vha464I CTTAAG 1 cut(s) 712
VpaK11BI GGWCC 1 cut(s) 565
XapI RAATTY 4 cut(s) 389, 776, 843, 985
XceI RCATGY 1 cut(s) 1181
XmnI GAANNNNTTC 1 cut(s) 295
XspI CTAG 3 cut(s) 272, 810, 1143
ZraI GACGTC 1 cut(s) 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.