FvH4_3g29960

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000131
Physical Location & Seq
Forward (+)
23095927 .. 23097130
1204 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g29960.t1

Sequence Viewer

Length: 855 bp
ATGTGCTCCCAGCTGGGAGTGTACATGCAGAGCCATGCATCTACACAGTTCCTGAGCGACTACGGCGTACGTGTAAATGAAAACGCTTACACACCTCAGGCGGTTTCTATAGGTCCGATTCATCGCTGCATGGAAGGCTTGCTAGTCACGGCAGAGGAGAAAGACAACTACCTACGAGAGCTTACTCCATTTGGGACTGAAGATATAGTAAGGGGCCAAGAAGCAAGACTGCGCAATTGTTACGCGTACAACACTGATCTGATCAACACTGATGACTTCGTGACAATTATCCTGAACGATGCCAGATTCATTATTGGGGTCTTACTGAGGTATCGTTTCCCTACATTGCAAGATGACAATGATTTCATGTTGACCGAACCCCGTTTGTCACAGTTGCGACGTGACATGGCGTTGCTTGAAAACCAAATTCTGAGCATTCCAAAAATTATCATAAGTGATCAAACTGAGGTCACTATCCGGAATGTTCTTGCATTTGAGCAATGCCACCACACTCTGGCCGAGAATTACATGACTGATTATTTTGTGTTCCTGGATCGCTTCCTGAGCACCGAAGAAGATGTGCGGTTGCTTGTTAAGAAAAGGATTGTCGAAATTAGGATCGCTGCGGACGCCGCAGGTACCGTCGAGGGCTCAGCAAAGGATCTGATCGAGAATCTTACTAATGGGTTTACTTTAGACCCAAATAGCTTCTGTTTTGCTGAACTTTGCCTATACGTAGACGAGTACTGCAGATCACCCAAGATACTTCAGAAGACGGTAACTGTCATTGGTTTACTTCTAAGCGTTACTGCAAACATATTACAGGGTGTTTATTGCGCAAAAGACAATTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

285

Amino Acids

32.31

Weight (kDa)

4.78

Isoelectric Point (pI)

40.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 24 - 143 7.4e-22 Plant protein of unknown function
DUF247 PF03140 144 - 253 3.4e-22 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 233, 838
Acc36I ACCTGC 1 cut(s) 626
Acc65I GGTACC 1 cut(s) 638
AccB1I GGYRCC 1 cut(s) 638
AccB7I CCANNNNNTGG 1 cut(s) 514
AccI GTMKAC 1 cut(s) 738
AccII CGCG 1 cut(s) 245
AccIII TCCGGA 1 cut(s) 477
AciI CCGC 4 cut(s) 101, 583, 626, 633
AclWI GGATC 3 cut(s) 561, 626, 669
AcoI YGGCCR 1 cut(s) 516
AcsI RAATTY 1 cut(s) 426
AcuI CTGAAG 2 cut(s) 219, 752
AcyI GRCGYC 1 cut(s) 630
AfaI GTAC 5 cut(s) 23, 69, 248, 640, 746
AfiI CCNNNNNNNGG 1 cut(s) 514
AflIII ACRYGT 2 cut(s) 70, 243
AgsI TTSAA 1 cut(s) 419
AjiI CACGTC 1 cut(s) 401
AjnI CCWGG 1 cut(s) 549
AluBI AGCT 3 cut(s) 13, 181, 708
AluI AGCT 3 cut(s) 13, 181, 708
Alw21I GWGCWC 2 cut(s) 8, 569
AlwI GGATC 3 cut(s) 561, 626, 669
AlwNI CAGNNNCTG 1 cut(s) 52
Aor13HI TCCGGA 1 cut(s) 477
AoxI GGCC 2 cut(s) 214, 516
ApeKI GCWGC 2 cut(s) 126, 623
ApoI RAATTY 1 cut(s) 426
Asp718I GGTACC 1 cut(s) 638
AspLEI GCGC 2 cut(s) 234, 839
AspS9I GGNCC 2 cut(s) 113, 214
AsuHPI GGTGA 1 cut(s) 747
AvaII GGWCC 1 cut(s) 113
AxyI CCTNAGG 1 cut(s) 96
BaeI ACNNNNGTAYC 2 cut(s) 314, 347
BanI GGYRCC 1 cut(s) 638
BanII GRGCYC 1 cut(s) 653
BbsI GAAGAC 1 cut(s) 779
Bbv12I GWGCWC 2 cut(s) 8, 569
BbvI GCAGC 2 cut(s) 113, 610
BceAI ACGGC 2 cut(s) 79, 165
BciT130I CCWGG 1 cut(s) 551
BclI TGATCA 2 cut(s) 261, 457
BfaI CTAG 2 cut(s) 143, 853
BfmI CTRYAG 2 cut(s) 108, 748
BfuAI ACCTGC 1 cut(s) 626
BisI GCNGC 3 cut(s) 127, 624, 633
BlpI GCTNAGC 1 cut(s) 652
BlsI GCNGC 3 cut(s) 128, 625, 634
BmcAI AGTACT 1 cut(s) 746
Bme1390I CCNGG 1 cut(s) 551
Bme18I GGWCC 1 cut(s) 113
BmgBI CACGTC 1 cut(s) 401
BmgT120I GGNCC 2 cut(s) 113, 214
BmiI GGNNCC 2 cut(s) 215, 640
BmrFI CCNGG 1 cut(s) 551
BmsI GCATC 2 cut(s) 47, 289
BpiI GAAGAC 1 cut(s) 779
Bpu10I CCTNAGC 2 cut(s) 53, 563
Bpu1102I GCTNAGC 1 cut(s) 652
BsaAI YACGTR 2 cut(s) 71, 736
BsaHI GRCGYC 1 cut(s) 630
BsaWI WCCGGW 1 cut(s) 477
Bsc4I CCNNNNNNNGG 1 cut(s) 514
Bse21I CCTNAGG 1 cut(s) 96
Bse3DI GCAATG 2 cut(s) 344, 506
BseAI TCCGGA 1 cut(s) 477
BseBI CCWGG 1 cut(s) 551
BseLI CCNNNNNNNGG 1 cut(s) 514
BseMI GCAATG 2 cut(s) 344, 506
BseMII CTCAG 7 cut(s) 44, 110, 317, 422, 456, 554, 666
BseRI GAGGAG 1 cut(s) 170
BseXI GCAGC 2 cut(s) 113, 610
BseYI CCCAGC 2 cut(s) 9, 13
Bsh1236I CGCG 1 cut(s) 245
BshFI GGCC 2 cut(s) 216, 518
BshNI GGYRCC 1 cut(s) 638
BsiHKAI GWGCWC 2 cut(s) 8, 569
BsiSI CCGG 1 cut(s) 478
BsiWI CGTACG 1 cut(s) 67
BslFI GGGAC 1 cut(s) 208
BslI CCNNNNNNNGG 1 cut(s) 514
BsmFI GGGAC 1 cut(s) 208
BsmI GAATGC 1 cut(s) 435
BsnI GGCC 2 cut(s) 216, 518
Bsp1286I GDGCHC 3 cut(s) 8, 569, 653
Bsp13I TCCGGA 1 cut(s) 477
Bsp1407I TGTACA 1 cut(s) 21
Bsp143I GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
Bsp1720I GCTNAGC 1 cut(s) 652
BspACI CCGC 4 cut(s) 101, 583, 626, 633
BspANI GGCC 2 cut(s) 216, 518
BspCNI CTCAG 7 cut(s) 45, 109, 318, 423, 457, 555, 665
BspEI TCCGGA 1 cut(s) 477
BspFNI CGCG 1 cut(s) 245
BspLI GGNNCC 2 cut(s) 215, 640
BspMAI CTGCAG 1 cut(s) 752
BspMI ACCTGC 1 cut(s) 626
BspPI GGATC 3 cut(s) 561, 626, 669
BspT107I GGYRCC 1 cut(s) 638
BsrDI GCAATG 2 cut(s) 344, 506
BsrGI TGTACA 1 cut(s) 21
BssMI GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
BssNI GRCGYC 1 cut(s) 630
Bst2UI CCWGG 1 cut(s) 551
Bst4CI ACNGT 5 cut(s) 48, 393, 643, 778, 784
BstACI GRCGYC 1 cut(s) 630
BstAUI TGTACA 1 cut(s) 21
BstBAI YACGTR 2 cut(s) 71, 736
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 8 cut(s) 53, 96, 326, 431, 465, 563, 652, 800
BstFNI CGCG 1 cut(s) 245
BstHHI GCGC 2 cut(s) 234, 839
BstKTI GATC 8 cut(s) 259, 264, 460, 556, 621, 664, 669, 755
BstMBI GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
BstMWI GCNNNNNNNGC 5 cut(s) 63, 135, 564, 629, 632
BstNI CCWGG 1 cut(s) 551
BstNSI RCATGY 1 cut(s) 28
BstSCI CCNGG 1 cut(s) 549
BstSFI CTRYAG 2 cut(s) 108, 748
BstSNI TACGTA 1 cut(s) 736
BstUI CGCG 1 cut(s) 245
BstV1I GCAGC 2 cut(s) 113, 610
BstV2I GAAGAC 1 cut(s) 779
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
Bsu36I CCTNAGG 1 cut(s) 96
BsuRI GGCC 2 cut(s) 216, 518
BtgZI GCGATG 1 cut(s) 107
BtrI CACGTC 1 cut(s) 401
BtsIMutI CAGTG 2 cut(s) 252, 267
BveI ACCTGC 1 cut(s) 626
Cac8I GCNNGC 1 cut(s) 140
CaiI CAGNNNCTG 1 cut(s) 52
CfoI GCGC 2 cut(s) 234, 839
Cfr13I GGNCC 2 cut(s) 113, 214
CseI GACGC 1 cut(s) 638
Csp6I GTAC 5 cut(s) 22, 68, 247, 639, 745
CviAII CATG 6 cut(s) 25, 35, 130, 367, 406, 529
CviJI RGCY 8 cut(s) 13, 33, 138, 181, 216, 518, 651, 708
CviKI_1 RGCY 8 cut(s) 13, 33, 138, 181, 216, 518, 651, 708
CviQI GTAC 5 cut(s) 22, 68, 247, 639, 745
DdeI CTNAG 8 cut(s) 53, 96, 326, 431, 465, 563, 652, 800
DpnI GATC 8 cut(s) 258, 263, 459, 555, 620, 663, 668, 754
DpnII GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
EaeI YGGCCR 1 cut(s) 516
Eco105I TACGTA 1 cut(s) 736
Eco24I GRGCYC 1 cut(s) 653
Eco47I GGWCC 1 cut(s) 113
Eco57I CTGAAG 2 cut(s) 219, 752
Eco81I CCTNAGG 1 cut(s) 96
EcoRII CCWGG 1 cut(s) 549
EcoT22I ATGCAT 1 cut(s) 40
EcoT38I GRGCYC 1 cut(s) 653
FaeI CATG 6 cut(s) 28, 38, 133, 370, 409, 532
FaqI GGGAC 1 cut(s) 208
FatI CATG 6 cut(s) 24, 34, 129, 366, 405, 528
FbaI TGATCA 2 cut(s) 261, 457
FblI GTMKAC 1 cut(s) 738
Fnu4HI GCNGC 3 cut(s) 127, 624, 633
FriOI GRGCYC 1 cut(s) 653
Fsp4HI GCNGC 3 cut(s) 127, 624, 633
FspBI CTAG 2 cut(s) 143, 853
FspI TGCGCA 2 cut(s) 233, 838
GlaI GCGC 2 cut(s) 233, 838
GluI GCNGC 3 cut(s) 127, 624, 633
GsaI CCCAGC 2 cut(s) 13, 17
HaeIII GGCC 2 cut(s) 216, 518
HapII CCGG 1 cut(s) 478
HgaI GACGC 1 cut(s) 638
HhaI GCGC 2 cut(s) 234, 839
Hin1I GRCGYC 1 cut(s) 630
Hin1II CATG 6 cut(s) 28, 38, 133, 370, 409, 532
Hin6I GCGC 2 cut(s) 232, 837
HinP1I GCGC 2 cut(s) 232, 837
HincII GTYRAC 1 cut(s) 372
HindII GTYRAC 1 cut(s) 372
HinfI GANTC 3 cut(s) 118, 306, 673
HpaII CCGG 1 cut(s) 478
HphI GGTGA 1 cut(s) 747
Hpy166II GTNNAC 5 cut(s) 22, 372, 690, 739, 794
Hpy188I TCNGA 5 cut(s) 117, 261, 432, 666, 771
Hpy188III TCNNGA 6 cut(s) 52, 280, 292, 478, 562, 670
Hpy8I GTNNAC 5 cut(s) 22, 372, 690, 739, 794
Hpy99I CGWCG 2 cut(s) 402, 647
HpyAV CCTTC 1 cut(s) 128
HpyCH4III ACNGT 5 cut(s) 48, 393, 643, 778, 784
HpyCH4IV ACGT 3 cut(s) 70, 400, 735
HpyCH4V TGCA 7 cut(s) 28, 38, 129, 349, 491, 750, 812
HpyF10VI GCNNNNNNNGC 5 cut(s) 63, 135, 564, 629, 632
HpyF3I CTNAG 8 cut(s) 53, 96, 326, 431, 465, 563, 652, 800
HpySE526I ACGT 3 cut(s) 70, 400, 735
Hsp92I GRCGYC 1 cut(s) 630
Hsp92II CATG 6 cut(s) 28, 38, 133, 370, 409, 532
HspAI GCGC 2 cut(s) 232, 837
Kpn2I TCCGGA 1 cut(s) 477
KpnI GGTACC 1 cut(s) 642
Ksp22I TGATCA 2 cut(s) 261, 457
Kzo9I GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
LmnI GCTCC 1 cut(s) 11
Lsp1109I GCAGC 2 cut(s) 113, 610
LweI GCATC 2 cut(s) 47, 289
MaeI CTAG 2 cut(s) 143, 853
MaeII ACGT 3 cut(s) 70, 400, 735
MaeIII GTNAC 8 cut(s) 145, 239, 280, 387, 401, 469, 778, 805
MalI GATC 8 cut(s) 258, 263, 459, 555, 620, 663, 668, 754
MboI GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
MboII GAAGA 4 cut(s) 212, 584, 587, 784
MfeI CAATTG 2 cut(s) 235, 847
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 3 cut(s) 8, 569, 653
MluCI AATT 7 cut(s) 235, 285, 426, 444, 523, 612, 847
MluI ACGCGT 1 cut(s) 243
MnlI CCTC 5 cut(s) 105, 148, 321, 460, 640
Mph1103I ATGCAT 1 cut(s) 40
MroI TCCGGA 1 cut(s) 477
MseI TTAA 1 cut(s) 594
MspA1I CMGCKG 1 cut(s) 13
MspI CCGG 1 cut(s) 478
MspR9I CCNGG 1 cut(s) 551
MunI CAATTG 2 cut(s) 235, 847
Mva1269I GAATGC 1 cut(s) 435
MvaI CCWGG 1 cut(s) 551
MvnI CGCG 1 cut(s) 245
MwoI GCNNNNNNNGC 5 cut(s) 63, 135, 564, 629, 632
NdeII GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
NlaIII CATG 6 cut(s) 28, 38, 133, 370, 409, 532
NlaIV GGNNCC 2 cut(s) 215, 640
NmeAIII GCCGAG 1 cut(s) 544
NmuCI GTSAC 5 cut(s) 145, 280, 387, 401, 469
NsbI TGCGCA 2 cut(s) 233, 838
NsiI ATGCAT 1 cut(s) 40
NspI RCATGY 1 cut(s) 28
PctI GAATGC 1 cut(s) 435
PfeI GAWTC 3 cut(s) 118, 306, 673
Pfl23II CGTACG 1 cut(s) 67
PflMI CCANNNNNTGG 1 cut(s) 514
PfoI TCCNGGA 1 cut(s) 549
PkrI GCNGC 3 cut(s) 128, 625, 634
Ppu21I YACGTR 2 cut(s) 71, 736
Psp6I CCWGG 1 cut(s) 549
PspFI CCCAGC 2 cut(s) 9, 13
PspGI CCWGG 1 cut(s) 549
PspLI CGTACG 1 cut(s) 67
PspN4I GGNNCC 2 cut(s) 215, 640
PspPI GGNCC 2 cut(s) 113, 214
PstI CTGCAG 1 cut(s) 752
PstNI CAGNNNCTG 1 cut(s) 52
PsuI RGATCY 1 cut(s) 661
PvuII CAGCTG 1 cut(s) 13
RsaI GTAC 5 cut(s) 23, 69, 248, 640, 746
RsaNI GTAC 5 cut(s) 22, 68, 247, 639, 745
SaqAI TTAA 1 cut(s) 594
SatI GCNGC 3 cut(s) 127, 624, 633
Sau3AI GATC 8 cut(s) 256, 261, 457, 553, 618, 661, 666, 752
Sau96I GGNCC 2 cut(s) 113, 214
ScaI AGTACT 1 cut(s) 746
ScrFI CCNGG 1 cut(s) 551
SduI GDGCHC 3 cut(s) 8, 569, 653
SfaNI GCATC 2 cut(s) 47, 289
SfcI CTRYAG 2 cut(s) 108, 748
SinI GGWCC 1 cut(s) 113
SnaBI TACGTA 1 cut(s) 736
Sse9I AATT 7 cut(s) 235, 285, 426, 444, 523, 612, 847
SsiI CCGC 4 cut(s) 101, 583, 626, 633
SspMI CTAG 2 cut(s) 143, 853
StyD4I CCNGG 1 cut(s) 549
TaaI ACNGT 5 cut(s) 48, 393, 643, 778, 784
TaiI ACGT 3 cut(s) 73, 403, 738
TaqI TCGA 3 cut(s) 609, 645, 669
TaqII GACCGA 1 cut(s) 389
TasI AATT 7 cut(s) 235, 285, 426, 444, 523, 612, 847
TatI WGTACW 2 cut(s) 21, 744
TauI GCSGC 1 cut(s) 635
TfiI GAWTC 3 cut(s) 118, 306, 673
Tru1I TTAA 1 cut(s) 594
Tru9I TTAA 1 cut(s) 594
TscAI CASTG 2 cut(s) 259, 274
TseFI GTSAC 5 cut(s) 145, 280, 387, 401, 469
TseI GCWGC 2 cut(s) 126, 623
Tsp45I GTSAC 5 cut(s) 145, 280, 387, 401, 469
TspDTI ATGAA 4 cut(s) 93, 110, 298, 355
TspRI CASTG 2 cut(s) 259, 274
Van91I CCANNNNNTGG 1 cut(s) 514
VpaK11BI GGWCC 1 cut(s) 113
XapI RAATTY 1 cut(s) 426
XceI RCATGY 1 cut(s) 28
XmiI GTMKAC 1 cut(s) 738
XspI CTAG 2 cut(s) 143, 853
ZrmI AGTACT 1 cut(s) 746
Zsp2I ATGCAT 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.