MD15G1119800.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000131
Physical Location & Seq
Forward (+)
8628666 .. 8629967
1302 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1119800.v1.1.491

Sequence Viewer

Length: 1302 bp
ATGCAGATAACGATCTCAGGAGGTAAAATGGAAGGAGTCCATGAAGCTCCACATTACATAGAAAACCCCAAGGATCCATTACAAGAGGAGTTGGATAACTTGTCAACCCTGTCCCCTTCGCGGTGTATCTATAGAGTTCCTAATCGACTGCGGCGGGTAAATGAGAAAGCATATACACCTCAAGTAGTCTCTATAGGCCCACTTCACCATGGCAAGGAACATTTAAAAGCCATGGAAGAACACAAAAAAAGGTACCTGCGACATTTTCTAAGCCGAACCAGGGAAAGGGTAAGCTTCTCTGATTATATACAAATGATAAAGGACCAAGAGGGAAGGTTGCGAGGTTCTTATGCAGAACCCATTGAGTTTGGCAGTGAGCAATTCGTAAGAATTGTTTTAGTGGATGCCGCCTTCGTCATTGAGTTCTTATTGAGGTGCCGTGACTCACATTGTGAAGGTGATGATTACATATTTAACAACCCTATGATGAGATGGGATGTGCGTCCAGATTTGGGGTTGCTTGAAAACCAGCTGCCATTCTTCATTCTTCAGGTTCTTTTTAACACACTTTCTTCTTCTGCACATCCACGGCCTTCGTTACTCGAAATTTCCTACTACTTTTTTGTAAGCCAAGTTGTTAGAAAGGGAAAAGAAGAGGCTTTTTATGAAAAATATTATACTGAAGTAGAAGTACAACATTTTGTTGATCTGATAAGAATTCTATACCGACCGTTGAAATCAAAAACTAGAAGGGAGCTTAAAACGACAGCCGTACCCAATGCGGCAGAGCTACTCCAGGCTGGAGTCAAGTTTACGGTCGGAAAAGGCAGCAATATATTTGACATAAAATTCTCGGATGGTATCCTCGAAATTCCGACGTTAATAGTAGCCGATACCACAGATCTGGCAATCAGAAATCTCCTTGCTTTTGAACAATGCCATAAGAGAGGGGAGGATTGCCTAACTAGTTATGTTTTCCTCATGAAGCGTCTTGCGAAAACCCCAAAGGATGTGGAATTGCTTGTTGAGCATGGAATTATTGAAAATTGGCTAGGCAGTACCAAGAAGATATCTACTTTGCTTCATGACCTTGGCACTGGGATGATATTAGACCACTACTGTTATGCCCCTCTTTGTGAAAACCTCAACAGCTACTGCAGAACTCGCAGGCACAAATGGATGGCAAATTTGAGACAAAATTATTTTAACACGCCTTGGTCCATTATTTCTGTTGTTGCAGCTGTTATTCTCCTCTTACTCACTTTCATACAAACTGTGTGCACTGTTATATCTGTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

434

Amino Acids

50.05

Weight (kDa)

8.26

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 43 - 420 1e-117 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 264
Acc65I GGTACC 1 cut(s) 252
AccB1I GGYRCC 2 cut(s) 252, 435
AccII CGCG 1 cut(s) 121
AciI CCGC 5 cut(s) 121, 151, 154, 408, 782
AclWI GGATC 2 cut(s) 68, 81
AcsI RAATTY 5 cut(s) 606, 717, 848, 870, 1186
AcuI CTGAAG 2 cut(s) 533, 702
AdeI CACNNNGTG 1 cut(s) 452
AfaI GTAC 4 cut(s) 254, 693, 774, 1060
AfiI CCNNNNNNNGG 5 cut(s) 120, 214, 280, 285, 512
AgsI TTSAA 4 cut(s) 524, 736, 932, 1043
AhlI ACTAGT 1 cut(s) 965
AjnI CCWGG 2 cut(s) 278, 795
AluBI AGCT 7 cut(s) 47, 294, 532, 757, 790, 1152, 1241
AluI AGCT 7 cut(s) 47, 294, 532, 757, 790, 1152, 1241
Alw21I GWGCWC 1 cut(s) 1283
Alw26I GTCTC 2 cut(s) 193, 1186
Alw44I GTGCAC 1 cut(s) 1279
AlwI GGATC 2 cut(s) 68, 81
AlwNI CAGNNNCTG 1 cut(s) 1155
AoxI GGCC 2 cut(s) 196, 590
ApaLI GTGCAC 1 cut(s) 1279
ApeKI GCWGC 3 cut(s) 532, 828, 1238
ApoI RAATTY 5 cut(s) 606, 717, 848, 870, 1186
Asp718I GGTACC 1 cut(s) 252
AspS9I GGNCC 3 cut(s) 197, 322, 1218
AsuHPI GGTGA 2 cut(s) 197, 470
AvaII GGWCC 2 cut(s) 322, 1218
BaeGI GKGCMC 1 cut(s) 1283
BaeI ACNNNNGTAYC 2 cut(s) 756, 789
BamHI GGATCC 1 cut(s) 73
BanI GGYRCC 2 cut(s) 252, 435
BarI GAAGNNNNNNTAC 2 cut(s) 675, 707
Bbv12I GWGCWC 1 cut(s) 1283
BbvI GCAGC 3 cut(s) 519, 840, 1250
BccI CCATC 3 cut(s) 486, 851, 1174
BceAI ACGGC 3 cut(s) 423, 605, 755
BciT130I CCWGG 2 cut(s) 280, 797
BciVI GTATCC 1 cut(s) 872
BcoDI GTCTC 2 cut(s) 193, 1186
BcuI ACTAGT 1 cut(s) 965
BfaI CTAG 3 cut(s) 747, 966, 1052
BfmI CTRYAG 3 cut(s) 130, 192, 1156
BfuAI ACCTGC 1 cut(s) 264
BfuI GTATCC 1 cut(s) 872
BglII AGATCT 1 cut(s) 901
BisI GCNGC 6 cut(s) 152, 408, 533, 783, 829, 1239
BlsI GCNGC 6 cut(s) 153, 409, 534, 784, 830, 1240
Bme1390I CCNGG 2 cut(s) 280, 797
Bme18I GGWCC 2 cut(s) 322, 1218
BmgT120I GGNCC 3 cut(s) 197, 322, 1218
BmiI GGNNCC 3 cut(s) 75, 254, 437
BmrFI CCNGG 2 cut(s) 280, 797
BmrI ACTGGG 1 cut(s) 1107
BmsI GCATC 1 cut(s) 394
BmuI ACTGGG 1 cut(s) 1107
BpmI CTGGAG 2 cut(s) 779, 822
BpuEI CTTGAG 1 cut(s) 165
BsaBI GATNNNNATC 1 cut(s) 11
BsaJI CCNNGG 7 cut(s) 69, 208, 231, 279, 587, 1090, 1214
Bsc4I CCNNNNNNNGG 5 cut(s) 120, 214, 280, 285, 512
Bse1I ACTGG 1 cut(s) 1102
Bse8I GATNNNNATC 1 cut(s) 11
BseBI CCWGG 2 cut(s) 280, 797
BseDI CCNNGG 7 cut(s) 69, 208, 231, 279, 587, 1090, 1214
BseGI GGATG 7 cut(s) 409, 502, 583, 862, 1015, 1107, 1185
BseJI GATNNNNATC 1 cut(s) 11
BseLI CCNNNNNNNGG 5 cut(s) 120, 214, 280, 285, 512
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 1 cut(s) 1102
BseRI GAGGAG 2 cut(s) 101, 1241
BseSI GKGCMC 1 cut(s) 1283
BseXI GCAGC 3 cut(s) 519, 840, 1250
BsgI GTGCAG 1 cut(s) 564
Bsh1236I CGCG 1 cut(s) 121
Bsh1285I CGRYCG 2 cut(s) 731, 819
BshFI GGCC 2 cut(s) 198, 592
BshNI GGYRCC 2 cut(s) 252, 435
BsiEI CGRYCG 2 cut(s) 731, 819
BsiHKAI GWGCWC 1 cut(s) 1283
BslFI GGGAC 1 cut(s) 97
BslI CCNNNNNNNGG 5 cut(s) 120, 214, 280, 285, 512
BsmAI GTCTC 2 cut(s) 193, 1186
BsmFI GGGAC 1 cut(s) 97
BsnI GGCC 2 cut(s) 198, 592
Bsp1286I GDGCHC 1 cut(s) 1283
Bsp143I GATC 4 cut(s) 12, 73, 706, 901
Bsp19I CCATGG 2 cut(s) 208, 231
BspACI CCGC 5 cut(s) 121, 151, 154, 408, 782
BspANI GGCC 2 cut(s) 198, 592
BspCNI CTCAG 1 cut(s) 29
BspFNI CGCG 1 cut(s) 121
BspHI TCATGA 2 cut(s) 981, 1084
BspLI GGNNCC 3 cut(s) 75, 254, 437
BspMAI CTGCAG 1 cut(s) 1160
BspMI ACCTGC 1 cut(s) 264
BspPI GGATC 2 cut(s) 68, 81
BspT107I GGYRCC 2 cut(s) 252, 435
BsrI ACTGG 1 cut(s) 1102
BssECI CCNNGG 7 cut(s) 69, 208, 231, 279, 587, 1090, 1214
BssMI GATC 4 cut(s) 12, 73, 706, 901
BssT1I CCWWGG 5 cut(s) 69, 208, 231, 1090, 1214
Bst2UI CCWGG 2 cut(s) 280, 797
Bst4CI ACNGT 5 cut(s) 732, 817, 1121, 1276, 1285
Bst6I CTCTTC 1 cut(s) 648
BstC8I GCNNGC 1 cut(s) 1169
BstDEI CTNAG 2 cut(s) 16, 269
BstDSI CCRYGG 3 cut(s) 208, 231, 587
BstF5I GGATG 7 cut(s) 409, 502, 583, 862, 1015, 1107, 1185
BstFNI CGCG 1 cut(s) 121
BstKTI GATC 4 cut(s) 15, 76, 709, 904
BstMAI GTCTC 2 cut(s) 193, 1186
BstMBI GATC 4 cut(s) 12, 73, 706, 901
BstMCI CGRYCG 2 cut(s) 731, 819
BstMWI GCNNNNNNNGC 2 cut(s) 1027, 1164
BstNI CCWGG 2 cut(s) 280, 797
BstSCI CCNGG 2 cut(s) 278, 795
BstSFI CTRYAG 3 cut(s) 130, 192, 1156
BstSLI GKGCMC 1 cut(s) 1283
BstUI CGCG 1 cut(s) 121
BstV1I GCAGC 3 cut(s) 519, 840, 1250
BstX2I RGATCY 2 cut(s) 73, 901
BstXI CCANNNNNNTGG 1 cut(s) 904
BstYI RGATCY 2 cut(s) 73, 901
BsuI GTATCC 1 cut(s) 872
BsuRI GGCC 2 cut(s) 198, 592
BtgI CCRYGG 3 cut(s) 208, 231, 587
BtsCI GGATG 7 cut(s) 409, 502, 583, 862, 1015, 1107, 1185
BtsI GCAGTG 1 cut(s) 379
BtsIMutI CAGTG 3 cut(s) 379, 1095, 1281
BveI ACCTGC 1 cut(s) 264
Cac8I GCNNGC 1 cut(s) 1169
CaiI CAGNNNCTG 1 cut(s) 1155
CciI TCATGA 2 cut(s) 981, 1084
Cfr13I GGNCC 3 cut(s) 197, 322, 1218
CseI GACGC 2 cut(s) 491, 977
Csp6I GTAC 4 cut(s) 253, 692, 773, 1059
CspCI CAANNNNNGTGG 2 cut(s) 993, 1028
CviAII CATG 6 cut(s) 41, 209, 232, 982, 1031, 1085
CviQI GTAC 4 cut(s) 253, 692, 773, 1059
DdeI CTNAG 2 cut(s) 16, 269
DpnI GATC 4 cut(s) 14, 75, 708, 903
DpnII GATC 4 cut(s) 12, 73, 706, 901
DraI TTTAAA 1 cut(s) 225
DraIII CACNNNGTG 1 cut(s) 452
Eam1104I CTCTTC 1 cut(s) 648
EarI CTCTTC 1 cut(s) 648
Eco130I CCWWGG 5 cut(s) 69, 208, 231, 1090, 1214
Eco32I GATATC 1 cut(s) 1071
Eco47I GGWCC 2 cut(s) 322, 1218
Eco57I CTGAAG 2 cut(s) 533, 702
EcoRI GAATTC 1 cut(s) 717
EcoRII CCWGG 2 cut(s) 278, 795
EcoRV GATATC 1 cut(s) 1071
EcoT14I CCWWGG 5 cut(s) 69, 208, 231, 1090, 1214
ErhI CCWWGG 5 cut(s) 69, 208, 231, 1090, 1214
FaeI CATG 6 cut(s) 44, 212, 235, 985, 1034, 1088
FaqI GGGAC 1 cut(s) 97
FatI CATG 6 cut(s) 40, 208, 231, 981, 1030, 1084
FauI CCCGC 1 cut(s) 147
Fnu4HI GCNGC 6 cut(s) 152, 408, 533, 783, 829, 1239
FokI GGATG 7 cut(s) 416, 509, 570, 869, 1022, 1114, 1192
Fsp4HI GCNGC 6 cut(s) 152, 408, 533, 783, 829, 1239
FspBI CTAG 3 cut(s) 747, 966, 1052
GluI GCNGC 6 cut(s) 152, 408, 533, 783, 829, 1239
GsuI CTGGAG 2 cut(s) 779, 822
HaeIII GGCC 2 cut(s) 198, 592
HgaI GACGC 2 cut(s) 491, 977
Hin1II CATG 6 cut(s) 44, 212, 235, 985, 1034, 1088
HincII GTYRAC 1 cut(s) 105
HindII GTYRAC 1 cut(s) 105
HindIII AAGCTT 1 cut(s) 292
HinfI GANTC 3 cut(s) 36, 443, 804
HphI GGTGA 2 cut(s) 197, 470
Hpy166II GTNNAC 3 cut(s) 105, 813, 1281
Hpy188I TCNGA 6 cut(s) 301, 711, 821, 856, 876, 914
Hpy188III TCNNGA 4 cut(s) 18, 506, 982, 1085
Hpy8I GTNNAC 3 cut(s) 105, 813, 1281
Hpy99I CGWCG 1 cut(s) 880
HpyAV CCTTC 7 cut(s) 26, 126, 327, 421, 449, 603, 744
HpyCH4III ACNGT 5 cut(s) 732, 817, 1121, 1276, 1285
HpyCH4IV ACGT 1 cut(s) 878
HpyCH4V TGCA 6 cut(s) 4, 353, 581, 1158, 1238, 1281
HpyF10VI GCNNNNNNNGC 2 cut(s) 1027, 1164
HpyF3I CTNAG 2 cut(s) 16, 269
HpySE526I ACGT 1 cut(s) 878
Hsp92II CATG 6 cut(s) 44, 212, 235, 985, 1034, 1088
KpnI GGTACC 1 cut(s) 256
Kzo9I GATC 4 cut(s) 12, 73, 706, 901
LmnI GCTCC 2 cut(s) 52, 754
Lsp1109I GCAGC 3 cut(s) 519, 840, 1250
LweI GCATC 1 cut(s) 394
MaeI CTAG 3 cut(s) 747, 966, 1052
MaeII ACGT 1 cut(s) 878
MaeIII GTNAC 2 cut(s) 440, 597
MalI GATC 4 cut(s) 14, 75, 708, 903
MboI GATC 4 cut(s) 12, 73, 706, 901
MboII GAAGA 7 cut(s) 248, 532, 539, 564, 567, 665, 1078
MflI RGATCY 2 cut(s) 73, 901
MhlI GDGCHC 1 cut(s) 1283
MlyI GAGTC 3 cut(s) 45, 437, 813
MmeI TCCRAC 3 cut(s) 72, 799, 899
MseI TTAA 7 cut(s) 224, 474, 561, 759, 881, 1206, 1300
MslI CAYNNNNRTG 1 cut(s) 1100
MspA1I CMGCKG 2 cut(s) 532, 1241
MspR9I CCNGG 2 cut(s) 280, 797
MvaI CCWGG 2 cut(s) 280, 797
MvnI CGCG 1 cut(s) 121
MwoI GCNNNNNNNGC 2 cut(s) 1027, 1164
NcoI CCATGG 2 cut(s) 208, 231
NdeII GATC 4 cut(s) 12, 73, 706, 901
NlaIII CATG 6 cut(s) 44, 212, 235, 985, 1034, 1088
NlaIV GGNNCC 3 cut(s) 75, 254, 437
NmuCI GTSAC 1 cut(s) 440
PagI TCATGA 2 cut(s) 981, 1084
PkrI GCNGC 6 cut(s) 153, 409, 534, 784, 830, 1240
PleI GAGTC 3 cut(s) 44, 437, 812
PpsI GAGTC 3 cut(s) 44, 437, 812
Psp6I CCWGG 2 cut(s) 278, 795
PspGI CCWGG 2 cut(s) 278, 795
PspN4I GGNNCC 3 cut(s) 75, 254, 437
PspPI GGNCC 3 cut(s) 197, 322, 1218
PstI CTGCAG 1 cut(s) 1160
PstNI CAGNNNCTG 1 cut(s) 1155
PsuI RGATCY 2 cut(s) 73, 901
PvuII CAGCTG 2 cut(s) 532, 1241
RsaI GTAC 4 cut(s) 254, 693, 774, 1060
RsaNI GTAC 4 cut(s) 253, 692, 773, 1059
RseI CAYNNNNRTG 1 cut(s) 1100
SaqAI TTAA 7 cut(s) 224, 474, 561, 759, 881, 1206, 1300
SatI GCNGC 6 cut(s) 152, 408, 533, 783, 829, 1239
Sau3AI GATC 4 cut(s) 12, 73, 706, 901
Sau96I GGNCC 3 cut(s) 197, 322, 1218
SchI GAGTC 3 cut(s) 45, 437, 813
ScrFI CCNGG 2 cut(s) 280, 797
SduI GDGCHC 1 cut(s) 1283
SfaNI GCATC 1 cut(s) 394
SfcI CTRYAG 3 cut(s) 130, 192, 1156
SinI GGWCC 2 cut(s) 322, 1218
SmiMI CAYNNNNRTG 1 cut(s) 1100
SmlI CTYRAG 1 cut(s) 180
SmoI CTYRAG 1 cut(s) 180
SpeI ACTAGT 1 cut(s) 965
SsiI CCGC 5 cut(s) 121, 151, 154, 408, 782
SspI AATATT 1 cut(s) 674
SspMI CTAG 3 cut(s) 747, 966, 1052
StyD4I CCNGG 2 cut(s) 278, 795
StyI CCWWGG 5 cut(s) 69, 208, 231, 1090, 1214
TaaI ACNGT 5 cut(s) 732, 817, 1121, 1276, 1285
TaiI ACGT 1 cut(s) 881
TaqI TCGA 3 cut(s) 145, 603, 867
TatI WGTACW 1 cut(s) 691
TauI GCSGC 3 cut(s) 154, 410, 785
Tru1I TTAA 7 cut(s) 224, 474, 561, 759, 881, 1206, 1300
Tru9I TTAA 7 cut(s) 224, 474, 561, 759, 881, 1206, 1300
TscAI CASTG 3 cut(s) 379, 1102, 1288
TseFI GTSAC 1 cut(s) 440
TseI GCWGC 3 cut(s) 532, 828, 1238
Tsp45I GTSAC 1 cut(s) 440
TspDTI ATGAA 6 cut(s) 57, 532, 681, 998, 1073, 1255
TspRI CASTG 3 cut(s) 379, 1102, 1288
VneI GTGCAC 1 cut(s) 1279
VpaK11BI GGWCC 2 cut(s) 322, 1218
XapI RAATTY 5 cut(s) 606, 717, 848, 870, 1186
XspI CTAG 3 cut(s) 747, 966, 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.