Rh6AG391200

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000131
Physical Location & Seq
Reverse (-)
58953445 .. 58955946
2502 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG391200.1

Sequence Viewer

Length: 1284 bp
ATGCATACTAAAACTAATTTGGATATGGGAGAGCTACAGCCAAAAAATCTGAAACATAAGTTGGAAGAGGTGTCTCCACTCTCCCCCCAGTGTTGTATCTACAGGGTTCCAAAGAGACTACGTGATGTGAATGAGAAGGCATACACACCTCAGGTGGTCTCAATAGGCCCGCTTCACCATGGCGGAGAAGGCTTAGAAGCCATGGAAGATCACAAAATACGGTATGTGAAGGACTTTCTGGAACGGACCAAGGTAAGCATGGAGGAATGTTTGAATACCTTGAAAAAGTGGGAAACAAAAATCCGTGCTTGTTATGCAGTAAAAATTGAATACAATGAAACTGAGCTTGTGGAAATGGTTCTTGTAGATTCCATTTTCACCTTTGAGCTCCTGCTGAGGTTTTCTTACCCAACACTGCAAGAGGAAAAGGTTGACCGTTTATTCGGAAAACCATGGATGCTAAGGGACATAACATATGACATGTTATTGCTTGAAAATCAGATCCCATTCTTCATTCTTGAGTATCTTTATTCCTTAGCCCTTGCCAGTAATACCATTCCTCTGCAACATACTACGGTGCTTTCTATCTCTGAGCTTACCCACCGGTTCTTGCAGAATAGGGTATACATAAGGCCATTTGAAGAAATGAAGGAGAAAATCAAGCATGAAGGAACAAAACATTTTGTTGATTTTGTCCTCACATGTCATCGACCTTTAGAGCTTCCCAAGAAGAAGAGACTCAAGACTTTAACCATATCGAGTGCAACATTATTATACCAGTCCGGAGTTAAGTTTGAGAATGTCAATGACAAAAACATATTTGACATAAAATTTGAGAATGGGGTCCTGCAAATTCCACACTTGAGAATTCGCGGGTCAACAGAAATTTTCTTTCGGAATCTCATTGCCTACGAGCAGTGTGAGCTCCATGATCACTACTTCAACGATTATGTGTTCATCATTGACCGCCTGGTTGACAGTTCCAAGGATGTGGACTTGCTTGTTAAGAGTGGAATCCTTGAATCTAAGCTACCGGATAGTGAAGCAGCGGCAAGTTATATCAACTCCCTTGACTTGGGGCCTTTTCTGTTCAGTAGAAACTTCTATTTTACTGATCTCTGTGAGGATCTGAATGCATACTATAGAGTCCCCTGGCACAAGTGGAAGGCAAGCTTGAAACAGGACTATTTTAGTACTCCATGGGCTGTACTGTCTATTGTTGTAGCGGCTATTCTCGTTGTGCTTACTTTTATTCAAACAGTGTGCTCTATAATGTCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

427

Amino Acids

49.96

Weight (kDa)

6.41

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 33 - 415 3.7e-112 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 624
AccII CGCG 1 cut(s) 873
AccIII TCCGGA 1 cut(s) 782
AciI CCGC 6 cut(s) 170, 183, 873, 967, 1049, 1226
AclWI GGATC 2 cut(s) 496, 1134
AcsI RAATTY 4 cut(s) 830, 852, 867, 885
AfaI GTAC 2 cut(s) 1195, 1209
AfiI CCNNNNNNNGG 1 cut(s) 1075
AflIII ACRYGT 2 cut(s) 480, 701
AgeI ACCGGT 1 cut(s) 603
AgsI TTSAA 9 cut(s) 274, 283, 329, 494, 641, 943, 1022, 1177, 1256
AjnI CCWGG 2 cut(s) 969, 1151
AjuI GAANNNNNNNTTGG 2 cut(s) 44, 76
AluBI AGCT 8 cut(s) 34, 346, 388, 595, 721, 925, 1030, 1173
AluI AGCT 8 cut(s) 34, 346, 388, 595, 721, 925, 1030, 1173
Alw21I GWGCWC 3 cut(s) 390, 927, 1268
Alw26I GTCTC 4 cut(s) 78, 109, 163, 730
AlwI GGATC 2 cut(s) 496, 1134
Aor13HI TCCGGA 1 cut(s) 782
AoxI GGCC 3 cut(s) 166, 632, 1079
ApeKI GCWGC 1 cut(s) 1046
ApoI RAATTY 4 cut(s) 830, 852, 867, 885
ArsI GACNNNNNNTTYG 4 cut(s) 425, 457, 815, 847
AsiGI ACCGGT 1 cut(s) 603
Asp700I GAANNNNTTC 1 cut(s) 357
AspS9I GGNCC 4 cut(s) 167, 246, 844, 1079
AsuHPI GGTGA 2 cut(s) 167, 370
AvaII GGWCC 2 cut(s) 246, 844
AxyI CCTNAGG 1 cut(s) 150
BanII GRGCYC 2 cut(s) 390, 927
Bbv12I GWGCWC 3 cut(s) 390, 927, 1268
BbvCI CCTCAGC 1 cut(s) 395
BbvI GCAGC 1 cut(s) 1058
BciT130I CCWGG 2 cut(s) 971, 1153
BclI TGATCA 1 cut(s) 931
BcoDI GTCTC 4 cut(s) 78, 109, 163, 730
BfmI CTRYAG 3 cut(s) 35, 100, 1141
BisI GCNGC 3 cut(s) 1047, 1050, 1227
BlsI GCNGC 3 cut(s) 1048, 1051, 1228
BmcAI AGTACT 1 cut(s) 1195
Bme1390I CCNGG 2 cut(s) 971, 1153
Bme18I GGWCC 2 cut(s) 246, 844
BmgT120I GGNCC 4 cut(s) 167, 246, 844, 1079
BmiI GGNNCC 3 cut(s) 108, 845, 1080
BmrFI CCNGG 2 cut(s) 971, 1153
BmrI ACTGGG 1 cut(s) 82
BmsI GCATC 1 cut(s) 447
BmuI ACTGGG 1 cut(s) 82
Bpu10I CCTNAGC 3 cut(s) 395, 461, 535
BpuEI CTTGAG 3 cut(s) 539, 725, 883
BsaAI YACGTR 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 163
BsaJI CCNNGG 7 cut(s) 178, 201, 249, 452, 984, 1151, 1199
BsaWI WCCGGW 3 cut(s) 603, 782, 1033
Bsc4I CCNNNNNNNGG 1 cut(s) 1075
Bse118I RCCGGY 1 cut(s) 603
Bse1I ACTGG 3 cut(s) 88, 546, 778
Bse21I CCTNAGG 1 cut(s) 150
Bse3DI GCAATG 1 cut(s) 903
BseAI TCCGGA 1 cut(s) 782
BseBI CCWGG 2 cut(s) 971, 1153
BseDI CCNNGG 7 cut(s) 178, 201, 249, 452, 984, 1151, 1199
BseGI GGATG 2 cut(s) 462, 994
BseLI CCNNNNNNNGG 1 cut(s) 1075
BseMI GCAATG 1 cut(s) 903
BseMII CTCAG 4 cut(s) 164, 333, 386, 582
BseNI ACTGG 3 cut(s) 88, 546, 778
BseXI GCAGC 1 cut(s) 1058
Bsh1236I CGCG 1 cut(s) 873
BshFI GGCC 3 cut(s) 168, 634, 1081
BshTI ACCGGT 1 cut(s) 603
BsiHKAI GWGCWC 3 cut(s) 390, 927, 1268
BsiSI CCGG 3 cut(s) 604, 783, 1034
BslFI GGGAC 2 cut(s) 479, 1133
BslI CCNNNNNNNGG 1 cut(s) 1075
BsmAI GTCTC 4 cut(s) 78, 109, 163, 730
BsmFI GGGAC 2 cut(s) 479, 1133
BsmI GAATGC 1 cut(s) 1138
BsnI GGCC 3 cut(s) 168, 634, 1081
Bso31I GGTCTC 1 cut(s) 163
Bsp1286I GDGCHC 3 cut(s) 390, 927, 1268
Bsp13I TCCGGA 1 cut(s) 782
Bsp143I GATC 5 cut(s) 208, 501, 931, 1114, 1126
Bsp19I CCATGG 4 cut(s) 178, 201, 452, 1199
BspACI CCGC 6 cut(s) 170, 183, 873, 967, 1049, 1226
BspANI GGCC 3 cut(s) 168, 634, 1081
BspCNI CTCAG 4 cut(s) 163, 334, 387, 583
BspEI TCCGGA 1 cut(s) 782
BspFNI CGCG 1 cut(s) 873
BspLI GGNNCC 3 cut(s) 108, 845, 1080
BspPI GGATC 2 cut(s) 496, 1134
BspTNI GGTCTC 1 cut(s) 163
BsrDI GCAATG 1 cut(s) 903
BsrFI RCCGGY 1 cut(s) 603
BsrI ACTGG 3 cut(s) 88, 546, 778
BssAI RCCGGY 1 cut(s) 603
BssECI CCNNGG 7 cut(s) 178, 201, 249, 452, 984, 1151, 1199
BssMI GATC 5 cut(s) 208, 501, 931, 1114, 1126
BssNAI GTATAC 1 cut(s) 625
BssT1I CCWWGG 6 cut(s) 178, 201, 249, 452, 984, 1199
Bst1107I GTATAC 1 cut(s) 625
Bst2UI CCWGG 2 cut(s) 971, 1153
Bst4CI ACNGT 6 cut(s) 222, 437, 577, 980, 1212, 1261
Bst6I CTCTTC 2 cut(s) 60, 728
BstBAI YACGTR 1 cut(s) 122
BstC8I GCNNGC 2 cut(s) 170, 1171
BstDEI CTNAG 8 cut(s) 150, 193, 342, 395, 461, 535, 591, 1026
BstDSI CCRYGG 4 cut(s) 178, 201, 452, 1199
BstF5I GGATG 2 cut(s) 462, 994
BstFNI CGCG 1 cut(s) 873
BstKTI GATC 5 cut(s) 211, 504, 934, 1117, 1129
BstMAI GTCTC 4 cut(s) 78, 109, 163, 730
BstMBI GATC 5 cut(s) 208, 501, 931, 1114, 1126
BstMWI GCNNNNNNNGC 3 cut(s) 189, 314, 922
BstNI CCWGG 2 cut(s) 971, 1153
BstNSI RCATGY 2 cut(s) 484, 705
BstSCI CCNGG 2 cut(s) 969, 1151
BstSFI CTRYAG 3 cut(s) 35, 100, 1141
BstUI CGCG 1 cut(s) 873
BstV1I GCAGC 1 cut(s) 1058
BstX2I RGATCY 2 cut(s) 501, 1126
BstXI CCANNNNNNTGG 1 cut(s) 991
BstYI RGATCY 2 cut(s) 501, 1126
BstZ17I GTATAC 1 cut(s) 625
Bsu36I CCTNAGG 1 cut(s) 150
BsuRI GGCC 3 cut(s) 168, 634, 1081
BtgI CCRYGG 4 cut(s) 178, 201, 452, 1199
BtsCI GGATG 2 cut(s) 462, 994
BtsI GCAGTG 2 cut(s) 413, 923
BtsIMutI CAGTG 4 cut(s) 95, 413, 923, 1266
Cac8I GCNNGC 2 cut(s) 170, 1171
Cfr10I RCCGGY 1 cut(s) 603
Cfr13I GGNCC 4 cut(s) 167, 246, 844, 1079
Csp6I GTAC 2 cut(s) 1194, 1208
CspAI ACCGGT 1 cut(s) 603
CviAII CATG 9 cut(s) 179, 202, 259, 453, 481, 665, 702, 929, 1200
CviQI GTAC 2 cut(s) 1194, 1208
DdeI CTNAG 8 cut(s) 150, 193, 342, 395, 461, 535, 591, 1026
DpnI GATC 5 cut(s) 210, 503, 933, 1116, 1128
DpnII GATC 5 cut(s) 208, 501, 931, 1114, 1126
Eam1104I CTCTTC 2 cut(s) 60, 728
EarI CTCTTC 2 cut(s) 60, 728
EciI GGCGGA 1 cut(s) 198
Ecl136II GAGCTC 2 cut(s) 388, 925
Eco130I CCWWGG 6 cut(s) 178, 201, 249, 452, 984, 1199
Eco24I GRGCYC 2 cut(s) 390, 927
Eco31I GGTCTC 1 cut(s) 163
Eco47I GGWCC 2 cut(s) 246, 844
Eco53kI GAGCTC 2 cut(s) 388, 925
Eco81I CCTNAGG 1 cut(s) 150
EcoICRI GAGCTC 2 cut(s) 388, 925
EcoO109I RGGNCCY 2 cut(s) 844, 1079
EcoRI GAATTC 1 cut(s) 867
EcoRII CCWGG 2 cut(s) 969, 1151
EcoT14I CCWWGG 6 cut(s) 178, 201, 249, 452, 984, 1199
EcoT22I ATGCAT 2 cut(s) 6, 1138
EcoT38I GRGCYC 2 cut(s) 390, 927
ErhI CCWWGG 6 cut(s) 178, 201, 249, 452, 984, 1199
FaeI CATG 9 cut(s) 182, 205, 262, 456, 484, 668, 705, 932, 1203
FalI AAGNNNNNCTT 2 cut(s) 1157, 1189
FaqI GGGAC 2 cut(s) 479, 1133
FatI CATG 9 cut(s) 178, 201, 258, 452, 480, 664, 701, 928, 1199
FauI CCCGC 2 cut(s) 177, 866
FauNDI CATATG 1 cut(s) 475
FbaI TGATCA 1 cut(s) 931
FblI GTMKAC 1 cut(s) 624
Fnu4HI GCNGC 3 cut(s) 1047, 1050, 1227
FokI GGATG 2 cut(s) 469, 1001
FriOI GRGCYC 2 cut(s) 390, 927
Fsp4HI GCNGC 3 cut(s) 1047, 1050, 1227
GluI GCNGC 3 cut(s) 1047, 1050, 1227
HaeIII GGCC 3 cut(s) 168, 634, 1081
HapII CCGG 3 cut(s) 604, 783, 1034
Hin1II CATG 9 cut(s) 182, 205, 262, 456, 484, 668, 705, 932, 1203
HincII GTYRAC 3 cut(s) 433, 879, 976
HindII GTYRAC 3 cut(s) 433, 879, 976
HindIII AAGCTT 1 cut(s) 1171
HinfI GANTC 6 cut(s) 368, 738, 898, 1014, 1022, 1146
HpaII CCGG 3 cut(s) 604, 783, 1034
HphI GGTGA 2 cut(s) 167, 370
Hpy166II GTNNAC 5 cut(s) 433, 625, 879, 976, 994
Hpy188I TCNGA 6 cut(s) 51, 446, 501, 592, 897, 1131
Hpy188III TCNNGA 4 cut(s) 239, 518, 742, 783
Hpy8I GTNNAC 5 cut(s) 433, 625, 879, 976, 994
HpyAV CCTTC 6 cut(s) 130, 182, 223, 643, 662, 1159
HpyCH4III ACNGT 6 cut(s) 222, 437, 577, 980, 1212, 1261
HpyCH4IV ACGT 1 cut(s) 121
HpyCH4V TGCA 8 cut(s) 4, 317, 418, 565, 613, 764, 850, 1136
HpyF10VI GCNNNNNNNGC 3 cut(s) 189, 314, 922
HpyF3I CTNAG 8 cut(s) 150, 193, 342, 395, 461, 535, 591, 1026
HpySE526I ACGT 1 cut(s) 121
Hsp92II CATG 9 cut(s) 182, 205, 262, 456, 484, 668, 705, 932, 1203
Kpn2I TCCGGA 1 cut(s) 782
Ksp22I TGATCA 1 cut(s) 931
Kzo9I GATC 5 cut(s) 208, 501, 931, 1114, 1126
LmnI GCTCC 2 cut(s) 393, 930
Lsp1109I GCAGC 1 cut(s) 1058
LweI GCATC 1 cut(s) 447
MaeII ACGT 1 cut(s) 121
MalI GATC 5 cut(s) 210, 503, 933, 1116, 1128
MboI GATC 5 cut(s) 208, 501, 931, 1114, 1126
MboII GAAGA 6 cut(s) 77, 218, 502, 653, 742, 745
MflI RGATCY 2 cut(s) 501, 1126
MhlI GDGCHC 3 cut(s) 390, 927, 1268
MluCI AATT 6 cut(s) 16, 324, 830, 852, 867, 885
MlyI GAGTC 2 cut(s) 732, 1155
MmeI TCCRAC 1 cut(s) 42
MnlI CCTC 8 cut(s) 61, 159, 256, 390, 415, 570, 707, 1117
Mph1103I ATGCAT 2 cut(s) 6, 1138
MroI TCCGGA 1 cut(s) 782
MroXI GAANNNNTTC 1 cut(s) 357
MseI TTAA 3 cut(s) 749, 789, 1005
MspA1I CMGCKG 1 cut(s) 1049
MspI CCGG 3 cut(s) 604, 783, 1034
MspR9I CCNGG 2 cut(s) 971, 1153
Mva1269I GAATGC 1 cut(s) 1138
MvaI CCWGG 2 cut(s) 971, 1153
MvnI CGCG 1 cut(s) 873
MwoI GCNNNNNNNGC 3 cut(s) 189, 314, 922
NcoI CCATGG 4 cut(s) 178, 201, 452, 1199
NdeI CATATG 1 cut(s) 475
NdeII GATC 5 cut(s) 208, 501, 931, 1114, 1126
NlaIII CATG 9 cut(s) 182, 205, 262, 456, 484, 668, 705, 932, 1203
NlaIV GGNNCC 3 cut(s) 108, 845, 1080
NsiI ATGCAT 2 cut(s) 6, 1138
NspI RCATGY 2 cut(s) 484, 705
PciI ACATGT 2 cut(s) 480, 701
PctI GAATGC 1 cut(s) 1138
PdmI GAANNNNTTC 1 cut(s) 357
PfeI GAWTC 4 cut(s) 368, 898, 1014, 1022
PinAI ACCGGT 1 cut(s) 603
PkrI GCNGC 3 cut(s) 1048, 1051, 1228
PleI GAGTC 2 cut(s) 732, 1154
PpsI GAGTC 2 cut(s) 732, 1154
Ppu21I YACGTR 1 cut(s) 122
PpuMI RGGWCCY 1 cut(s) 844
PscI ACATGT 2 cut(s) 480, 701
Psp124BI GAGCTC 2 cut(s) 390, 927
Psp5II RGGWCCY 1 cut(s) 844
Psp6I CCWGG 2 cut(s) 969, 1151
PspGI CCWGG 2 cut(s) 969, 1151
PspN4I GGNNCC 3 cut(s) 108, 845, 1080
PspPI GGNCC 4 cut(s) 167, 246, 844, 1079
PspPPI RGGWCCY 1 cut(s) 844
PsuI RGATCY 2 cut(s) 501, 1126
RsaI GTAC 2 cut(s) 1195, 1209
RsaNI GTAC 2 cut(s) 1194, 1208
SacI GAGCTC 2 cut(s) 390, 927
SaqAI TTAA 3 cut(s) 749, 789, 1005
SatI GCNGC 3 cut(s) 1047, 1050, 1227
Sau3AI GATC 5 cut(s) 208, 501, 931, 1114, 1126
Sau96I GGNCC 4 cut(s) 167, 246, 844, 1079
ScaI AGTACT 1 cut(s) 1195
SchI GAGTC 2 cut(s) 732, 1155
ScrFI CCNGG 2 cut(s) 971, 1153
SduI GDGCHC 3 cut(s) 390, 927, 1268
SfaNI GCATC 1 cut(s) 447
SfcI CTRYAG 3 cut(s) 35, 100, 1141
SinI GGWCC 2 cut(s) 246, 844
SmlI CTYRAG 3 cut(s) 518, 740, 862
SmoI CTYRAG 3 cut(s) 518, 740, 862
Sse9I AATT 6 cut(s) 16, 324, 830, 852, 867, 885
SsiI CCGC 6 cut(s) 170, 183, 873, 967, 1049, 1226
SstI GAGCTC 2 cut(s) 390, 927
StyD4I CCNGG 2 cut(s) 969, 1151
StyI CCWWGG 6 cut(s) 178, 201, 249, 452, 984, 1199
TaaI ACNGT 6 cut(s) 222, 437, 577, 980, 1212, 1261
TaiI ACGT 1 cut(s) 124
TaqI TCGA 2 cut(s) 709, 758
TasI AATT 6 cut(s) 16, 324, 830, 852, 867, 885
TatI WGTACW 2 cut(s) 1193, 1207
TauI GCSGC 2 cut(s) 1052, 1229
TfiI GAWTC 4 cut(s) 368, 898, 1014, 1022
Tru1I TTAA 3 cut(s) 749, 789, 1005
Tru9I TTAA 3 cut(s) 749, 789, 1005
TscAI CASTG 4 cut(s) 95, 420, 923, 1266
TseI GCWGC 1 cut(s) 1046
TspDTI ATGAA 5 cut(s) 351, 502, 662, 681, 946
TspGWI ACGGA 2 cut(s) 259, 293
TspRI CASTG 4 cut(s) 95, 420, 923, 1266
VpaK11BI GGWCC 2 cut(s) 246, 844
XapI RAATTY 4 cut(s) 830, 852, 867, 885
XceI RCATGY 2 cut(s) 484, 705
XcmI CCANNNNNNNNNTGG 1 cut(s) 256
XmiI GTMKAC 1 cut(s) 624
XmnI GAANNNNTTC 1 cut(s) 357
ZrmI AGTACT 1 cut(s) 1195
Zsp2I ATGCAT 2 cut(s) 6, 1138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.