MD15G1118600.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000131
Physical Location & Seq
Reverse (-)
8510588 .. 8517458
6871 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1118600.v1.1.491

Sequence Viewer

Length: 1416 bp
ATGGATATGGAACAAATAGTGATGCCAGCCAAAAGTGAGGCTGAACTTAAAAGTGAAGAAGATGGTGAAAAAGATGATATGATGAACTCACGCCGTAAAACGGAAGGGATCGATGAAGCTCCAAATGACATAGAAAACCCCTACGATCCATTACTCGAGGACTTGCGTAACTTGTTTACCCTGTCCCCCTACGATCCATTACAGGAGGAGTTGGACTTGCTTACCCTGTCCCCTTACCTGTGTATCTACAGAGTTCCTGAGCGACTACGGCAGGGAAATGAGAAAGCATATACACCTCAAGTAGTCTCTATAGGCCCACTTCACCATGGCGAGGAACACTTAAAAGGCATGGAGGAGCACAAAAAAAGGTACCTGCTAGATTTTCTAAGTCGAACCAGGGTAAGCTTCTACGATTGTATAAAAATGATAAAGATGCAAGAGGGAAAGTTGCGAGGTTGTTATGCAGAACCCATTGAGCTTGGCAGTGATGAATTTGTAAGAATTGTTTTACTGGATGCCGCCTTCGTCATTGAGTTCTTATTGAGATACTATTCCGTAAATTTTCTTGGCCAAGCTGATGACACCGTGACCAAGCCAATGATGATGTGGGATGTGCGTCCAGACTTCTTGTTGCTTGAAAATCAGCTGCCATTCTTCATTCTTCAGGTTCTTTTCAACACACTTTTTTCTTCTGCAGATCAGCAGCCTTCGTTACTTGAAATTTCCTACTTTTCGTTACAAAGGGAAATCGATAGTAAGCGAAAAGAAGAGATTTTTGGCGAAATATGTTCTTCTGGAGAAGAAGTACAACATTTTGTTGATCTGATAAGAATTCTATACCGACCGTTGAAATCAAAAACTGGAGGGGAGCTTAAAGGCACAGCAGTACCCAACGTGACAGAGCTAGTCCAGGCTGGAGTCGAGTTTAAGGTAGGAAAAGGCAGCAGCTTATTTGACATAAACTTCTCGTGTGGGACCCTCAAAATTCCAAAGTTAACAGTATGCGATACCACAGATCTGAAACTCAAAAATCTCCTTGCTTTTGAACTATGCCGTCACAGAGAAACAAATTACCTAACTAATTATGTCTTCCTCATGAAGCGTCTCGCGAAAACCCCAAAGGATGTGGAATTGCTTGTTGAGTATGGAATTATTGATAATTGGCTAGGTGATGCCAAGAAGATATCTACTTTGCTTCTTGACTTTGACACTGGGGTCGTGGGTAATGACTACTATTATGCTAGTCTTTGTAAGGACCTGAACGACTACTGCAGATCTCGCAGGCACAAATGGATGACAAATTTGAGACGAAATTATTTTAACACGCCTTGGAGGATTATTTCTATTGTTGCAGCTGTTATTCTCCTCATACTCACTTCCATACAAACTGTGTGCTCTATTATATCTATTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

472

Amino Acids

54.32

Weight (kDa)

5.19

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 82 - 458 4.5e-111 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1214
Acc36I ACCTGC 1 cut(s) 381
Acc65I GGTACC 1 cut(s) 369
AccB1I GGYRCC 1 cut(s) 369
AccII CGCG 1 cut(s) 1109
AciI CCGC 1 cut(s) 519
AclWI GGATC 3 cut(s) 116, 140, 188
AcoI YGGCCR 1 cut(s) 568
AcsI RAATTY 6 cut(s) 491, 559, 720, 831, 984, 1300
AcuI CTGAAG 1 cut(s) 647
AfaI GTAC 3 cut(s) 371, 807, 888
AfiI CCNNNNNNNGG 2 cut(s) 100, 331
AgsI TTSAA 5 cut(s) 638, 676, 719, 850, 1046
AjnI CCWGG 2 cut(s) 395, 909
AjuI GAANNNNNNNTTGG 2 cut(s) 759, 791
AluBI AGCT 9 cut(s) 119, 405, 478, 575, 646, 871, 904, 948, 1355
AluI AGCT 9 cut(s) 119, 405, 478, 575, 646, 871, 904, 948, 1355
Alw21I GWGCWC 2 cut(s) 360, 1397
Alw26I GTCTC 3 cut(s) 310, 1109, 1300
AlwI GGATC 3 cut(s) 116, 140, 188
Ama87I CYCGRG 1 cut(s) 155
AoxI GGCC 2 cut(s) 313, 568
ApeKI GCWGC 5 cut(s) 646, 703, 942, 945, 1352
ApoI RAATTY 6 cut(s) 491, 559, 720, 831, 984, 1300
Asp718I GGTACC 1 cut(s) 369
AspS9I GGNCC 3 cut(s) 314, 975, 1255
AsuHPI GGTGA 3 cut(s) 77, 314, 1181
AvaI CYCGRG 1 cut(s) 155
AvaII GGWCC 2 cut(s) 975, 1255
BaeI ACNNNNGTAYC 4 cut(s) 226, 259, 870, 903
BalI TGGCCA 1 cut(s) 570
BanI GGYRCC 1 cut(s) 369
BauI CACGAG 1 cut(s) 967
BbsI GAAGAC 1 cut(s) 1081
Bbv12I GWGCWC 2 cut(s) 360, 1397
BbvI GCAGC 5 cut(s) 633, 715, 954, 957, 1364
BccI CCATC 1 cut(s) 56
BceAI ACGGC 3 cut(s) 78, 284, 1038
BciT130I CCWGG 2 cut(s) 397, 911
BcoDI GTCTC 3 cut(s) 310, 1109, 1300
BfaI CTAG 4 cut(s) 377, 905, 1166, 1242
BfmI CTRYAG 4 cut(s) 247, 309, 693, 1270
BfuAI ACCTGC 1 cut(s) 381
BglII AGATCT 2 cut(s) 1015, 1274
BisI GCNGC 6 cut(s) 519, 647, 704, 943, 946, 1353
BlsI GCNGC 6 cut(s) 520, 648, 705, 944, 947, 1354
Bme1390I CCNGG 2 cut(s) 397, 911
Bme18I GGWCC 2 cut(s) 975, 1255
BmeT110I CYCGRG 1 cut(s) 155
BmgT120I GGNCC 3 cut(s) 314, 975, 1255
BmiI GGNNCC 3 cut(s) 371, 976, 977
BmrFI CCNGG 2 cut(s) 397, 911
BmrI ACTGGG 1 cut(s) 1221
BmsI GCATC 4 cut(s) 12, 423, 505, 1162
BmuI ACTGGG 1 cut(s) 1221
BpiI GAAGAC 1 cut(s) 1081
BpmI CTGGAG 3 cut(s) 816, 882, 936
Bpu10I CCTNAGC 1 cut(s) 258
BpuEI CTTGAG 1 cut(s) 282
Bsa29I ATCGAT 2 cut(s) 111, 750
BsaJI CCNNGG 3 cut(s) 325, 396, 1328
BsaXI ACNNNNNCTCC 2 cut(s) 789, 819
Bsc4I CCNNNNNNNGG 2 cut(s) 100, 331
Bse1I ACTGG 3 cut(s) 516, 865, 1216
BseBI CCWGG 2 cut(s) 397, 911
BseCI ATCGAT 2 cut(s) 111, 750
BseDI CCNNGG 3 cut(s) 325, 396, 1328
BseGI GGATG 4 cut(s) 520, 616, 1129, 1299
BseLI CCNNNNNNNGG 2 cut(s) 100, 331
BseMII CTCAG 1 cut(s) 249
BseNI ACTGG 3 cut(s) 516, 865, 1216
BseRI GAGGAG 3 cut(s) 221, 368, 1355
BseXI GCAGC 5 cut(s) 633, 715, 954, 957, 1364
Bsh1236I CGCG 1 cut(s) 1109
Bsh1285I CGRYCG 1 cut(s) 845
BshFI GGCC 2 cut(s) 315, 570
BshNI GGYRCC 1 cut(s) 369
BshVI ATCGAT 2 cut(s) 111, 750
BsiEI CGRYCG 1 cut(s) 845
BsiHKAI GWGCWC 2 cut(s) 360, 1397
BsiHKCI CYCGRG 1 cut(s) 155
BslFI GGGAC 3 cut(s) 169, 214, 988
BslI CCNNNNNNNGG 2 cut(s) 100, 331
BsmAI GTCTC 3 cut(s) 310, 1109, 1300
BsmBI CGTCTC 2 cut(s) 1109, 1300
BsmFI GGGAC 3 cut(s) 169, 214, 988
BsnI GGCC 2 cut(s) 315, 570
BsoBI CYCGRG 1 cut(s) 155
Bsp1286I GDGCHC 2 cut(s) 360, 1397
Bsp143I GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
Bsp19I CCATGG 1 cut(s) 325
Bsp68I TCGCGA 1 cut(s) 1109
BspACI CCGC 1 cut(s) 519
BspANI GGCC 2 cut(s) 315, 570
BspCNI CTCAG 1 cut(s) 250
BspDI ATCGAT 2 cut(s) 111, 750
BspFNI CGCG 1 cut(s) 1109
BspHI TCATGA 1 cut(s) 1095
BspLI GGNNCC 3 cut(s) 371, 976, 977
BspMAI CTGCAG 2 cut(s) 697, 1274
BspMI ACCTGC 1 cut(s) 381
BspPI GGATC 3 cut(s) 116, 140, 188
BspT107I GGYRCC 1 cut(s) 369
BsrI ACTGG 3 cut(s) 516, 865, 1216
BssECI CCNNGG 3 cut(s) 325, 396, 1328
BssMI GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
BssSI CACGAG 1 cut(s) 967
BssT1I CCWWGG 2 cut(s) 325, 1328
Bst2BI CACGAG 1 cut(s) 967
Bst2UI CCWGG 2 cut(s) 397, 911
Bst4CI ACNGT 4 cut(s) 586, 846, 1000, 1390
Bst6I CTCTTC 1 cut(s) 762
BstC8I GCNNGC 2 cut(s) 27, 1283
BstDEI CTNAG 2 cut(s) 258, 386
BstDSI CCRYGG 1 cut(s) 325
BstF5I GGATG 4 cut(s) 520, 616, 1129, 1299
BstFNI CGCG 1 cut(s) 1109
BstKTI GATC 7 cut(s) 111, 148, 196, 700, 823, 1018, 1277
BstMAI GTCTC 3 cut(s) 310, 1109, 1300
BstMBI GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
BstMCI CGRYCG 1 cut(s) 845
BstMWI GCNNNNNNNGC 2 cut(s) 268, 1278
BstNI CCWGG 2 cut(s) 397, 911
BstSCI CCNGG 2 cut(s) 395, 909
BstSFI CTRYAG 4 cut(s) 247, 309, 693, 1270
BstUI CGCG 1 cut(s) 1109
BstV1I GCAGC 5 cut(s) 633, 715, 954, 957, 1364
BstV2I GAAGAC 1 cut(s) 1081
BstX2I RGATCY 2 cut(s) 1015, 1274
BstYI RGATCY 2 cut(s) 1015, 1274
Bsu15I ATCGAT 2 cut(s) 111, 750
BsuRI GGCC 2 cut(s) 315, 570
BsuTUI ATCGAT 2 cut(s) 111, 750
BtgI CCRYGG 1 cut(s) 325
BtsCI GGATG 4 cut(s) 520, 616, 1129, 1299
BtsI GCAGTG 1 cut(s) 490
BtsIMutI CAGTG 2 cut(s) 490, 1209
BtuMI TCGCGA 1 cut(s) 1109
BveI ACCTGC 1 cut(s) 381
Cac8I GCNNGC 2 cut(s) 27, 1283
CciI TCATGA 1 cut(s) 1095
Cfr13I GGNCC 3 cut(s) 314, 975, 1255
ClaI ATCGAT 2 cut(s) 111, 750
CseI GACGC 2 cut(s) 605, 1091
Csp6I GTAC 3 cut(s) 370, 806, 887
CspCI CAANNNNNGTGG 2 cut(s) 1107, 1142
CviAII CATG 3 cut(s) 326, 349, 1096
CviQI GTAC 3 cut(s) 370, 806, 887
DdeI CTNAG 2 cut(s) 258, 386
DpnI GATC 7 cut(s) 110, 147, 195, 699, 822, 1017, 1276
DpnII GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
DrdI GACNNNNNNGTC 1 cut(s) 1214
DseDI GACNNNNNNGTC 1 cut(s) 1214
EaeI YGGCCR 1 cut(s) 568
Eam1104I CTCTTC 1 cut(s) 762
EarI CTCTTC 1 cut(s) 762
Eco130I CCWWGG 2 cut(s) 325, 1328
Eco32I GATATC 1 cut(s) 1185
Eco47I GGWCC 2 cut(s) 975, 1255
Eco57I CTGAAG 1 cut(s) 647
Eco88I CYCGRG 1 cut(s) 155
EcoO109I RGGNCCY 2 cut(s) 975, 1255
EcoRI GAATTC 1 cut(s) 831
EcoRII CCWGG 2 cut(s) 395, 909
EcoRV GATATC 1 cut(s) 1185
EcoT14I CCWWGG 2 cut(s) 325, 1328
ErhI CCWWGG 2 cut(s) 325, 1328
Esp3I CGTCTC 2 cut(s) 1109, 1300
FaeI CATG 3 cut(s) 329, 352, 1099
FaqI GGGAC 3 cut(s) 169, 214, 988
FatI CATG 3 cut(s) 325, 348, 1095
Fnu4HI GCNGC 6 cut(s) 519, 647, 704, 943, 946, 1353
FokI GGATG 4 cut(s) 527, 623, 1136, 1306
Fsp4HI GCNGC 6 cut(s) 519, 647, 704, 943, 946, 1353
FspBI CTAG 4 cut(s) 377, 905, 1166, 1242
GluI GCNGC 6 cut(s) 519, 647, 704, 943, 946, 1353
GsuI CTGGAG 3 cut(s) 816, 882, 936
HaeIII GGCC 2 cut(s) 315, 570
HgaI GACGC 2 cut(s) 605, 1091
Hin1II CATG 3 cut(s) 329, 352, 1099
HincII GTYRAC 1 cut(s) 996
HindII GTYRAC 1 cut(s) 996
HindIII AAGCTT 1 cut(s) 403
HinfI GANTC 1 cut(s) 918
HpaI GTTAAC 1 cut(s) 996
HphI GGTGA 3 cut(s) 77, 314, 1181
Hpy166II GTNNAC 2 cut(s) 177, 996
Hpy188I TCNGA 2 cut(s) 825, 1020
Hpy188III TCNNGA 6 cut(s) 257, 620, 795, 1096, 1108, 1199
Hpy8I GTNNAC 2 cut(s) 177, 996
HpyAV CCTTC 3 cut(s) 98, 532, 717
HpyCH4III ACNGT 4 cut(s) 586, 846, 1000, 1390
HpyCH4IV ACGT 1 cut(s) 894
HpyCH4V TGCA 5 cut(s) 436, 464, 695, 1272, 1352
HpyF10VI GCNNNNNNNGC 2 cut(s) 268, 1278
HpyF3I CTNAG 2 cut(s) 258, 386
HpySE526I ACGT 1 cut(s) 894
Hsp92II CATG 3 cut(s) 329, 352, 1099
KflI GGGWCCC 1 cut(s) 975
KpnI GGTACC 1 cut(s) 373
KspAI GTTAAC 1 cut(s) 996
Kzo9I GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
LmnI GCTCC 3 cut(s) 124, 355, 868
Lsp1109I GCAGC 5 cut(s) 633, 715, 954, 957, 1364
LweI GCATC 4 cut(s) 12, 423, 505, 1162
MaeI CTAG 4 cut(s) 377, 905, 1166, 1242
MaeII ACGT 1 cut(s) 894
MaeIII GTNAC 6 cut(s) 167, 586, 711, 735, 895, 1055
MalI GATC 7 cut(s) 110, 147, 195, 699, 822, 1017, 1276
MboI GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
MflI RGATCY 2 cut(s) 1015, 1274
MhlI GDGCHC 2 cut(s) 360, 1397
MlsI TGGCCA 1 cut(s) 570
MluNI TGGCCA 1 cut(s) 570
MlyI GAGTC 1 cut(s) 927
MmeI TCCRAC 1 cut(s) 192
Mox20I TGGCCA 1 cut(s) 570
MscI TGGCCA 1 cut(s) 570
MseI TTAA 7 cut(s) 48, 341, 873, 927, 995, 1320, 1414
Msp20I TGGCCA 1 cut(s) 570
MspA1I CMGCKG 2 cut(s) 646, 1355
MspR9I CCNGG 2 cut(s) 397, 911
MvaI CCWGG 2 cut(s) 397, 911
MvnI CGCG 1 cut(s) 1109
MwoI GCNNNNNNNGC 2 cut(s) 268, 1278
NcoI CCATGG 1 cut(s) 325
NdeII GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
NlaIII CATG 3 cut(s) 329, 352, 1099
NlaIV GGNNCC 3 cut(s) 371, 976, 977
NmuCI GTSAC 3 cut(s) 586, 895, 1055
NruI TCGCGA 1 cut(s) 1109
PaeR7I CTCGAG 1 cut(s) 155
PagI TCATGA 1 cut(s) 1095
PkrI GCNGC 6 cut(s) 520, 648, 705, 944, 947, 1354
PleI GAGTC 1 cut(s) 926
PpsI GAGTC 1 cut(s) 926
PpuMI RGGWCCY 2 cut(s) 975, 1255
Psp5II RGGWCCY 2 cut(s) 975, 1255
Psp6I CCWGG 2 cut(s) 395, 909
PspGI CCWGG 2 cut(s) 395, 909
PspN4I GGNNCC 3 cut(s) 371, 976, 977
PspPI GGNCC 3 cut(s) 314, 975, 1255
PspPPI RGGWCCY 2 cut(s) 975, 1255
PspXI VCTCGAGB 1 cut(s) 155
PstI CTGCAG 2 cut(s) 697, 1274
PsuI RGATCY 2 cut(s) 1015, 1274
PvuII CAGCTG 2 cut(s) 646, 1355
RruI TCGCGA 1 cut(s) 1109
RsaI GTAC 3 cut(s) 371, 807, 888
RsaNI GTAC 3 cut(s) 370, 806, 887
SaqAI TTAA 7 cut(s) 48, 341, 873, 927, 995, 1320, 1414
SatI GCNGC 6 cut(s) 519, 647, 704, 943, 946, 1353
Sau3AI GATC 7 cut(s) 108, 145, 193, 697, 820, 1015, 1274
Sau96I GGNCC 3 cut(s) 314, 975, 1255
SchI GAGTC 1 cut(s) 927
ScrFI CCNGG 2 cut(s) 397, 911
SduI GDGCHC 2 cut(s) 360, 1397
SfaNI GCATC 4 cut(s) 12, 423, 505, 1162
SfcI CTRYAG 4 cut(s) 247, 309, 693, 1270
Sfr274I CTCGAG 1 cut(s) 155
SinI GGWCC 2 cut(s) 975, 1255
SlaI CTCGAG 1 cut(s) 155
SmlI CTYRAG 2 cut(s) 155, 297
SmoI CTYRAG 2 cut(s) 155, 297
SsiI CCGC 1 cut(s) 519
SspMI CTAG 4 cut(s) 377, 905, 1166, 1242
StyD4I CCNGG 2 cut(s) 395, 909
StyI CCWWGG 2 cut(s) 325, 1328
TaaI ACNGT 4 cut(s) 586, 846, 1000, 1390
TaiI ACGT 1 cut(s) 897
TaqI TCGA 5 cut(s) 111, 156, 391, 750, 921
TatI WGTACW 1 cut(s) 805
TauI GCSGC 1 cut(s) 521
Tru1I TTAA 7 cut(s) 48, 341, 873, 927, 995, 1320, 1414
Tru9I TTAA 7 cut(s) 48, 341, 873, 927, 995, 1320, 1414
TscAI CASTG 2 cut(s) 490, 1216
TseFI GTSAC 3 cut(s) 586, 895, 1055
TseI GCWGC 5 cut(s) 646, 703, 942, 945, 1352
Tsp45I GTSAC 3 cut(s) 586, 895, 1055
TspDTI ATGAA 5 cut(s) 98, 129, 504, 646, 1112
TspGWI ACGGA 2 cut(s) 116, 544
TspRI CASTG 2 cut(s) 490, 1216
VpaK11BI GGWCC 2 cut(s) 975, 1255
XapI RAATTY 6 cut(s) 491, 559, 720, 831, 984, 1300
XcmI CCANNNNNNNNNTGG 1 cut(s) 603
XhoI CTCGAG 1 cut(s) 155
XspI CTAG 4 cut(s) 377, 905, 1166, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.