Rmu_sc0000539.1_g000085

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000539.1
OG0000131
Physical Location & Seq
Reverse (-)
370702 .. 372318
1617 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000539.1_g000085.1.cds

Sequence Viewer

Length: 1506 bp
atggtcagagaatgcgctgtcccagcaatccgtccttcgggagaaatccgtccttcggaagaaatccatcctttgggaggtcaatatgaagcaccggagaaggagccaagaagtctttatgagggtctaaaactgtggtgttgtagctcagtctcagctaaagatcaggtcgataatcatgtgtcaaattcagcagatgatgttcctagtgctgctgaaccaacatcgcctgatcggagtccgaggaatcaaacaacaatgcgtaaacaaaatgtgagtgatcccattgcaattataataatggataaagttacaaacaagcctacattttggcccgactgctgtatctataaagtccccgggagattgtgcaaaggttacgaagacttctacacacctcgggtggtctcagttggaccttatcactactgcaatggaggaagctcggaaggaatgcaagcctataaattcatatacctggaggcatttttcagtcggaacaacttgaacttggaccactgtcttggagttgtaagagagctagaaggaaaagccaggagttattatgtcgagccagtcaaactaaacagtgatgaatttgctctaatgttgctggtggatggaagttttcttttggagctaatgcttaggcattactttgtggaaattgttgataaatgtgatcggatatatcgcaagccgagagtgattcaggatgtttatcgcgacctcttgttgattgagaaccaaattcccttctttattctcgaggctttgtataaggaattggatatgaagacttggcgagcccagccatctcttgtgacgcttacaaatgtgttcttcaggtatttggtggaagttgacaagtttcctggtccagaaaaagtgaagcatttcgttgattttatccgatggtactacttgcccaagagtgacaggaacagtgaaaaagggattatctttgacgttccaagtgtgacagcaatggacgaggctggagttaagtttgagaaagtcacgaaatcgatcacattgcttgacatggaattcactaatggctctctgcgaattccgcacttcatagtaaatgattggagtgagactctcttcaggaatctcattgcgtttgagcaatgtcatgatcaccaagtaaagtacatctcacagtttatgtgccttatggggtgtatgatcaggactccaaaggatgcagatttactcatcgatcgcgaaattatatctaccacgctagggactagtgaagatatttcgaccatattcaacaagattagcaaaggtgtgaccttggatagttcattttattacttcactctccttaaaaatctgaataaatattgcaggagcccatggcacagttggaaagcaactctgaagagggactatttcaacactccatggaaactggtttctacaattgctgcatttgtattgcttgtcctcactgttatacaaacagtgtgctccatcatatccctatcgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

501

Amino Acids

57.74

Weight (kDa)

6.4

Isoelectric Point (pI)

34.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 296
AccB7I CCANNNNNTGG 1 cut(s) 73
AccII CGCG 2 cut(s) 726, 1233
AciI CCGC 1 cut(s) 1076
AclWI GGATC 1 cut(s) 275
AcsI RAATTY 6 cut(s) 187, 467, 596, 750, 1049, 1071
AcuI CTGAAG 3 cut(s) 829, 1096, 1415
AfaI GTAC 2 cut(s) 920, 1160
AfiI CCNNNNNNNGG 5 cut(s) 37, 55, 73, 77, 1254
AgsI TTSAA 3 cut(s) 508, 1285, 1411
AhlI ACTAGT 1 cut(s) 1259
AjnI CCWGG 3 cut(s) 477, 554, 874
AluBI AGCT 5 cut(s) 147, 158, 444, 541, 640
AluI AGCT 5 cut(s) 147, 158, 444, 541, 640
Alw21I GWGCWC 1 cut(s) 1487
Alw26I GTCTC 3 cut(s) 157, 412, 1097
AlwI GGATC 1 cut(s) 275
Ama87I CYCGRG 3 cut(s) 359, 399, 767
AoxI GGCC 1 cut(s) 332
ApeKI GCWGC 2 cut(s) 212, 1442
ApoI RAATTY 6 cut(s) 187, 467, 596, 750, 1049, 1071
Asp700I GAANNNNTTC 1 cut(s) 896
AspLEI GCGC 1 cut(s) 17
AspS9I GGNCC 4 cut(s) 333, 416, 514, 878
AsuC2I CCSGG 2 cut(s) 360, 361
AsuHPI GGTGA 1 cut(s) 1139
AvaI CYCGRG 3 cut(s) 359, 399, 767
AvaII GGWCC 3 cut(s) 416, 514, 878
BaeI ACNNNNGTAYC 2 cut(s) 328, 361
BanII GRGCYC 2 cut(s) 811, 1370
BbsI GAAGAC 2 cut(s) 390, 803
Bbv12I GWGCWC 1 cut(s) 1487
BbvI GCAGC 2 cut(s) 199, 1429
BccI CCATC 5 cut(s) 75, 614, 823, 909, 1496
BcgI CGANNNNNNTGC 2 cut(s) 1018, 1052
BciT130I CCWGG 3 cut(s) 479, 556, 876
BclI TGATCA 2 cut(s) 1144, 1194
BcnI CCSGG 2 cut(s) 360, 361
BcoDI GTCTC 3 cut(s) 157, 412, 1097
BcuI ACTAGT 1 cut(s) 1259
BfaI CTAG 4 cut(s) 207, 542, 1253, 1260
BisI GCNGC 2 cut(s) 213, 1443
BlsI GCNGC 2 cut(s) 214, 1444
Bme1390I CCNGG 5 cut(s) 360, 361, 479, 556, 876
Bme18I GGWCC 3 cut(s) 416, 514, 878
BmeT110I CYCGRG 3 cut(s) 359, 399, 767
BmgT120I GGNCC 4 cut(s) 333, 416, 514, 878
BmiI GGNNCC 2 cut(s) 105, 1367
BmrFI CCNGG 5 cut(s) 360, 361, 479, 556, 876
BmsI GCATC 1 cut(s) 1201
BoxI GACNNNNGTC 1 cut(s) 519
BpiI GAAGAC 2 cut(s) 390, 803
BplI GAGNNNNNCTC 2 cut(s) 1090, 1122
BpmI CTGGAG 2 cut(s) 500, 1020
Bpu10I CCTNAGC 1 cut(s) 647
BpuMI CCSGG 2 cut(s) 360, 361
Bsa29I ATCGAT 2 cut(s) 1028, 1227
BsaBI GATNNNNATC 1 cut(s) 720
BsaI GGTCTC 1 cut(s) 412
BsaJI CCNNGG 7 cut(s) 242, 358, 359, 398, 1308, 1370, 1418
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 55, 73, 77, 1254
Bse1I ACTGG 2 cut(s) 575, 1431
Bse3DI GCAATG 6 cut(s) 285, 439, 993, 1034, 1122, 1142
Bse8I GATNNNNATC 1 cut(s) 720
BseBI CCWGG 3 cut(s) 479, 556, 876
BseCI ATCGAT 2 cut(s) 1028, 1227
BseDI CCNNGG 7 cut(s) 242, 358, 359, 398, 1308, 1370, 1418
BseGI GGATG 4 cut(s) 67, 625, 721, 1216
BseJI GATNNNNATC 1 cut(s) 720
BseLI CCNNNNNNNGG 5 cut(s) 37, 55, 73, 77, 1254
BseMI GCAATG 6 cut(s) 285, 439, 993, 1034, 1122, 1142
BseMII CTCAG 3 cut(s) 162, 168, 423
BseNI ACTGG 2 cut(s) 575, 1431
BseXI GCAGC 2 cut(s) 199, 1429
BseYI CCCAGC 2 cut(s) 22, 810
Bsh1236I CGCG 2 cut(s) 726, 1233
Bsh1285I CGRYCG 1 cut(s) 1231
BshFI GGCC 1 cut(s) 334
BshVI ATCGAT 2 cut(s) 1028, 1227
BsiEI CGRYCG 1 cut(s) 1231
BsiHKAI GWGCWC 1 cut(s) 1487
BsiHKCI CYCGRG 3 cut(s) 359, 399, 767
BsiSI CCGG 2 cut(s) 95, 360
BslFI GGGAC 4 cut(s) 5, 341, 1270, 1415
BslI CCNNNNNNNGG 5 cut(s) 37, 55, 73, 77, 1254
BsmAI GTCTC 3 cut(s) 157, 412, 1097
BsmFI GGGAC 4 cut(s) 5, 341, 1270, 1415
BsmI GAATGC 2 cut(s) 17, 459
BsnI GGCC 1 cut(s) 334
Bso31I GGTCTC 1 cut(s) 412
BsoBI CYCGRG 3 cut(s) 359, 399, 767
Bsp1286I GDGCHC 3 cut(s) 811, 1370, 1487
Bsp143I GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
Bsp19I CCATGG 2 cut(s) 1370, 1418
Bsp68I TCGCGA 2 cut(s) 726, 1233
BspACI CCGC 1 cut(s) 1076
BspANI GGCC 1 cut(s) 334
BspCNI CTCAG 3 cut(s) 161, 167, 422
BspDI ATCGAT 2 cut(s) 1028, 1227
BspFNI CGCG 2 cut(s) 726, 1233
BspHI TCATGA 1 cut(s) 1141
BspLI GGNNCC 2 cut(s) 105, 1367
BspPI GGATC 1 cut(s) 275
BspTNI GGTCTC 1 cut(s) 412
BsrDI GCAATG 6 cut(s) 285, 439, 993, 1034, 1122, 1142
BsrI ACTGG 2 cut(s) 575, 1431
BssECI CCNNGG 7 cut(s) 242, 358, 359, 398, 1308, 1370, 1418
BssMI GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
BssT1I CCWWGG 3 cut(s) 1308, 1370, 1418
Bst2UI CCWGG 3 cut(s) 479, 556, 876
Bst4CI ACNGT 8 cut(s) 135, 521, 590, 947, 1170, 1379, 1468, 1480
Bst6I CTCTTC 2 cut(s) 1115, 1391
BstC8I GCNNGC 3 cut(s) 459, 698, 807
BstDEI CTNAG 4 cut(s) 148, 154, 409, 647
BstDSI CCRYGG 2 cut(s) 1370, 1418
BstENI CCTNNNNNAGG 1 cut(s) 75
BstF5I GGATG 4 cut(s) 67, 625, 721, 1216
BstFNI CGCG 2 cut(s) 726, 1233
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 8 cut(s) 166, 235, 283, 685, 1032, 1147, 1197, 1231
BstMAI GTCTC 3 cut(s) 157, 412, 1097
BstMBI GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
BstMCI CGRYCG 1 cut(s) 1231
BstMWI GCNNNNNNNGC 3 cut(s) 23, 811, 1075
BstNI CCWGG 3 cut(s) 479, 556, 876
BstPAI GACNNNNGTC 1 cut(s) 519
BstSCI CCNGG 5 cut(s) 358, 359, 477, 554, 874
BstUI CGCG 2 cut(s) 726, 1233
BstV1I GCAGC 2 cut(s) 199, 1429
BstV2I GAAGAC 2 cut(s) 390, 803
BstXI CCANNNNNNTGG 1 cut(s) 524
Bsu15I ATCGAT 2 cut(s) 1028, 1227
BsuRI GGCC 1 cut(s) 334
BsuTUI ATCGAT 2 cut(s) 1028, 1227
BtgI CCRYGG 2 cut(s) 1370, 1418
BtgZI GCGATG 1 cut(s) 210
BtsCI GGATG 4 cut(s) 67, 625, 721, 1216
BtsIMutI CAGTG 5 cut(s) 517, 595, 952, 1464, 1485
BtuMI TCGCGA 2 cut(s) 726, 1233
Cac8I GCNNGC 3 cut(s) 459, 698, 807
CciI TCATGA 1 cut(s) 1141
CfoI GCGC 1 cut(s) 17
Cfr13I GGNCC 4 cut(s) 333, 416, 514, 878
Cfr9I CCCGGG 1 cut(s) 359
ClaI ATCGAT 2 cut(s) 1028, 1227
CseI GACGC 1 cut(s) 835
Csp6I GTAC 2 cut(s) 919, 1159
CviAII CATG 5 cut(s) 179, 1045, 1142, 1371, 1419
CviQI GTAC 2 cut(s) 919, 1159
DdeI CTNAG 4 cut(s) 148, 154, 409, 647
DpnI GATC 8 cut(s) 165, 234, 282, 684, 1031, 1146, 1196, 1230
DpnII GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
Eam1104I CTCTTC 2 cut(s) 1115, 1391
EarI CTCTTC 2 cut(s) 1115, 1391
Eco130I CCWWGG 3 cut(s) 1308, 1370, 1418
Eco24I GRGCYC 2 cut(s) 811, 1370
Eco31I GGTCTC 1 cut(s) 412
Eco47I GGWCC 3 cut(s) 416, 514, 878
Eco57I CTGAAG 3 cut(s) 829, 1096, 1415
Eco88I CYCGRG 3 cut(s) 359, 399, 767
EcoNI CCTNNNNNAGG 1 cut(s) 75
EcoRI GAATTC 2 cut(s) 1049, 1071
EcoRII CCWGG 3 cut(s) 477, 554, 874
EcoT14I CCWWGG 3 cut(s) 1308, 1370, 1418
EcoT38I GRGCYC 2 cut(s) 811, 1370
ErhI CCWWGG 3 cut(s) 1308, 1370, 1418
FaeI CATG 5 cut(s) 182, 1048, 1145, 1374, 1422
FaqI GGGAC 4 cut(s) 5, 341, 1270, 1415
FatI CATG 5 cut(s) 178, 1044, 1141, 1370, 1418
FbaI TGATCA 2 cut(s) 1144, 1194
Fnu4HI GCNGC 2 cut(s) 213, 1443
FokI GGATG 4 cut(s) 54, 632, 728, 1223
FriOI GRGCYC 2 cut(s) 811, 1370
Fsp4HI GCNGC 2 cut(s) 213, 1443
FspBI CTAG 4 cut(s) 207, 542, 1253, 1260
GlaI GCGC 1 cut(s) 16
GluI GCNGC 2 cut(s) 213, 1443
GsaI CCCAGC 2 cut(s) 26, 814
GsuI CTGGAG 2 cut(s) 500, 1020
HaeIII GGCC 1 cut(s) 334
HapII CCGG 2 cut(s) 95, 360
HgaI GACGC 1 cut(s) 835
HhaI GCGC 1 cut(s) 17
Hin1II CATG 5 cut(s) 182, 1048, 1145, 1374, 1422
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HincII GTYRAC 1 cut(s) 865
HindII GTYRAC 1 cut(s) 865
HinfI GANTC 6 cut(s) 238, 247, 709, 1105, 1117, 1201
HpaII CCGG 2 cut(s) 95, 360
HphI GGTGA 1 cut(s) 1139
Hpy166II GTNNAC 2 cut(s) 266, 865
Hpy8I GTNNAC 2 cut(s) 266, 865
HpyAV CCTTC 6 cut(s) 45, 63, 94, 443, 539, 766
HpyCH4III ACNGT 8 cut(s) 135, 521, 590, 947, 1170, 1379, 1468, 1480
HpyCH4IV ACGT 1 cut(s) 969
HpyCH4V TGCA 7 cut(s) 290, 372, 432, 457, 1214, 1362, 1445
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 811, 1075
HpyF3I CTNAG 4 cut(s) 148, 154, 409, 647
HpySE526I ACGT 1 cut(s) 969
Hsp92II CATG 5 cut(s) 182, 1048, 1145, 1374, 1422
HspAI GCGC 1 cut(s) 15
Ksp22I TGATCA 2 cut(s) 1144, 1194
Kzo9I GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
LmnI GCTCC 4 cut(s) 103, 637, 1365, 1490
Lsp1109I GCAGC 2 cut(s) 199, 1429
LweI GCATC 1 cut(s) 1201
MaeI CTAG 4 cut(s) 207, 542, 1253, 1260
MaeII ACGT 1 cut(s) 969
MaeIII GTNAC 7 cut(s) 310, 377, 823, 935, 979, 1018, 1303
MalI GATC 8 cut(s) 165, 234, 282, 684, 1031, 1146, 1196, 1230
MboI GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
MboII GAAGA 7 cut(s) 71, 395, 808, 835, 1102, 1277, 1408
MfeI CAATTG 1 cut(s) 1437
MhlI GDGCHC 3 cut(s) 811, 1370, 1487
MlyI GAGTC 3 cut(s) 247, 1099, 1195
MmeI TCCRAC 3 cut(s) 394, 476, 1361
MroXI GAANNNNTTC 1 cut(s) 896
MseI TTAA 2 cut(s) 1005, 1341
MspI CCGG 2 cut(s) 95, 360
MspR9I CCNGG 5 cut(s) 360, 361, 479, 556, 876
MunI CAATTG 1 cut(s) 1437
Mva1269I GAATGC 2 cut(s) 17, 459
MvaI CCWGG 3 cut(s) 479, 556, 876
MvnI CGCG 2 cut(s) 726, 1233
MwoI GCNNNNNNNGC 3 cut(s) 23, 811, 1075
NciI CCSGG 2 cut(s) 360, 361
NcoI CCATGG 2 cut(s) 1370, 1418
NdeII GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
NlaIII CATG 5 cut(s) 182, 1048, 1145, 1374, 1422
NlaIV GGNNCC 2 cut(s) 105, 1367
NmeAIII GCCGAG 1 cut(s) 726
NmuCI GTSAC 5 cut(s) 823, 935, 979, 1018, 1303
NruI TCGCGA 2 cut(s) 726, 1233
PaeR7I CTCGAG 1 cut(s) 767
PagI TCATGA 1 cut(s) 1141
PctI GAATGC 2 cut(s) 17, 459
PdmI GAANNNNTTC 1 cut(s) 896
PfeI GAWTC 3 cut(s) 247, 709, 1117
PflMI CCANNNNNTGG 1 cut(s) 73
PkrI GCNGC 2 cut(s) 214, 1444
Ple19I CGATCG 1 cut(s) 1231
PleI GAGTC 3 cut(s) 246, 1099, 1195
PpsI GAGTC 3 cut(s) 246, 1099, 1195
PshAI GACNNNNGTC 1 cut(s) 519
PsiI TTATAA 1 cut(s) 296
Psp6I CCWGG 3 cut(s) 477, 554, 874
PspFI CCCAGC 2 cut(s) 22, 810
PspGI CCWGG 3 cut(s) 477, 554, 874
PspN4I GGNNCC 2 cut(s) 105, 1367
PspPI GGNCC 4 cut(s) 333, 416, 514, 878
PvuI CGATCG 1 cut(s) 1231
RruI TCGCGA 2 cut(s) 726, 1233
RsaI GTAC 2 cut(s) 920, 1160
RsaNI GTAC 2 cut(s) 919, 1159
SaqAI TTAA 2 cut(s) 1005, 1341
SatI GCNGC 2 cut(s) 213, 1443
Sau3AI GATC 8 cut(s) 163, 232, 280, 682, 1029, 1144, 1194, 1228
Sau96I GGNCC 4 cut(s) 333, 416, 514, 878
SchI GAGTC 3 cut(s) 247, 1099, 1195
ScrFI CCNGG 5 cut(s) 360, 361, 479, 556, 876
SduI GDGCHC 3 cut(s) 811, 1370, 1487
SfaNI GCATC 1 cut(s) 1201
Sfr274I CTCGAG 1 cut(s) 767
SinI GGWCC 3 cut(s) 416, 514, 878
SlaI CTCGAG 1 cut(s) 767
SmaI CCCGGG 1 cut(s) 361
SmlI CTYRAG 1 cut(s) 767
SmoI CTYRAG 1 cut(s) 767
SpeI ACTAGT 1 cut(s) 1259
SsiI CCGC 1 cut(s) 1076
SspI AATATT 1 cut(s) 1358
SspMI CTAG 4 cut(s) 207, 542, 1253, 1260
StyD4I CCNGG 5 cut(s) 358, 359, 477, 554, 874
StyI CCWWGG 3 cut(s) 1308, 1370, 1418
TaaI ACNGT 8 cut(s) 135, 521, 590, 947, 1170, 1379, 1468, 1480
TaiI ACGT 1 cut(s) 972
TaqI TCGA 6 cut(s) 171, 570, 768, 1028, 1227, 1274
TatI WGTACW 1 cut(s) 1158
TfiI GAWTC 3 cut(s) 247, 709, 1117
Tru1I TTAA 2 cut(s) 1005, 1341
Tru9I TTAA 2 cut(s) 1005, 1341
TscAI CASTG 5 cut(s) 524, 595, 952, 1471, 1485
TseFI GTSAC 5 cut(s) 823, 935, 979, 1018, 1303
TseI GCWGC 2 cut(s) 212, 1442
Tsp45I GTSAC 5 cut(s) 823, 935, 979, 1018, 1303
TspDTI ATGAA 6 cut(s) 102, 460, 609, 809, 1072, 1308
TspGWI ACGGA 2 cut(s) 20, 38
TspMI CCCGGG 1 cut(s) 359
TspRI CASTG 5 cut(s) 524, 595, 952, 1471, 1485
Van91I CCANNNNNTGG 1 cut(s) 73
VpaK11BI GGWCC 3 cut(s) 416, 514, 878
XagI CCTNNNNNAGG 1 cut(s) 75
XapI RAATTY 6 cut(s) 187, 467, 596, 750, 1049, 1071
XcmI CCANNNNNNNNNTGG 1 cut(s) 1377
XhoI CTCGAG 1 cut(s) 767
XmaI CCCGGG 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 896
XspI CTAG 4 cut(s) 207, 542, 1253, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.