Plant protein of unknown function
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF247 | PF03140 | 27 - 406 | 5.6e-107 | Plant protein of unknown function |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 287 |
| Acc36I | ACCTGC | 2 cut(s) | 216, 698 |
| AciI | CCGC | 5 cut(s) | 385, 1023, 1138, 1162, 1196 |
| AcoI | YGGCCR | 1 cut(s) | 1175 |
| AcsI | RAATTY | 3 cut(s) | 522, 825, 987 |
| AfaI | GTAC | 4 cut(s) | 125, 255, 819, 1215 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 187, 1138 |
| AflII | CTTAAG | 1 cut(s) | 1151 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1236 |
| AjnI | CCWGG | 1 cut(s) | 1172 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 987, 1019 |
| AluBI | AGCT | 4 cut(s) | 43, 970, 1014, 1266 |
| AluI | AGCT | 4 cut(s) | 43, 970, 1014, 1266 |
| Alw21I | GWGCWC | 1 cut(s) | 1113 |
| Alw26I | GTCTC | 4 cut(s) | 91, 145, 899, 1226 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1025, 1074 |
| Ama87I | CYCGRG | 1 cut(s) | 92 |
| AoxI | GGCC | 1 cut(s) | 1175 |
| ApeKI | GCWGC | 5 cut(s) | 970, 1019, 1025, 1074, 1116 |
| ApoI | RAATTY | 3 cut(s) | 522, 825, 987 |
| AspLEI | GCGC | 1 cut(s) | 288 |
| AspS9I | GGNCC | 2 cut(s) | 149, 710 |
| AsuHPI | GGTGA | 2 cut(s) | 34, 149 |
| AvaI | CYCGRG | 1 cut(s) | 92 |
| AvaII | GGWCC | 2 cut(s) | 149, 710 |
| BalI | TGGCCA | 1 cut(s) | 1177 |
| BbsI | GAAGAC | 2 cut(s) | 956, 1232 |
| Bbv12I | GWGCWC | 1 cut(s) | 1113 |
| BbvI | GCAGC | 5 cut(s) | 957, 1012, 1031, 1061, 1128 |
| BccI | CCATC | 4 cut(s) | 399, 448, 917, 1043 |
| BciT130I | CCWGG | 1 cut(s) | 1174 |
| BciVI | GTATCC | 1 cut(s) | 75 |
| BcoDI | GTCTC | 4 cut(s) | 91, 145, 899, 1226 |
| BfaI | CTAG | 1 cut(s) | 1211 |
| BfmI | CTRYAG | 4 cut(s) | 702, 898, 1017, 1114 |
| BfrI | CTTAAG | 1 cut(s) | 1151 |
| BfuAI | ACCTGC | 2 cut(s) | 216, 698 |
| BfuI | GTATCC | 1 cut(s) | 75 |
| BisI | GCNGC | 7 cut(s) | 971, 1020, 1023, 1026, 1075, 1117, 1197 |
| BlpI | GCTNAGC | 1 cut(s) | 1262 |
| BlsI | GCNGC | 7 cut(s) | 972, 1021, 1024, 1027, 1076, 1118, 1198 |
| BmcAI | AGTACT | 1 cut(s) | 1215 |
| Bme1390I | CCNGG | 1 cut(s) | 1174 |
| Bme18I | GGWCC | 2 cut(s) | 149, 710 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1236 |
| BmeT110I | CYCGRG | 1 cut(s) | 92 |
| BmgT120I | GGNCC | 2 cut(s) | 149, 710 |
| BmiI | GGNNCC | 1 cut(s) | 1065 |
| BmrFI | CCNGG | 1 cut(s) | 1174 |
| BmsI | GCATC | 2 cut(s) | 539, 744 |
| BpiI | GAAGAC | 2 cut(s) | 956, 1232 |
| BpmI | CTGGAG | 1 cut(s) | 777 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1262 |
| BpuEI | CTTGAG | 2 cut(s) | 518, 627 |
| BsaI | GGTCTC | 1 cut(s) | 899 |
| BsaJI | CCNNGG | 2 cut(s) | 160, 183 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1048, 1078 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 187, 1138 |
| Bse1I | ACTGG | 1 cut(s) | 1132 |
| Bse3DI | GCAATG | 1 cut(s) | 876 |
| BseBI | CCWGG | 1 cut(s) | 1174 |
| BseDI | CCNNGG | 2 cut(s) | 160, 183 |
| BseGI | GGATG | 4 cut(s) | 355, 441, 459, 967 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 187, 1138 |
| BseMI | GCAATG | 1 cut(s) | 876 |
| BseMII | CTCAG | 3 cut(s) | 368, 537, 1231 |
| BseNI | ACTGG | 1 cut(s) | 1132 |
| BseRI | GAGGAG | 2 cut(s) | 53, 203 |
| BseXI | GCAGC | 5 cut(s) | 957, 1012, 1031, 1061, 1128 |
| BseYI | CCCAGC | 1 cut(s) | 731 |
| BsgI | GTGCAG | 1 cut(s) | 94 |
| Bsh1285I | CGRYCG | 1 cut(s) | 940 |
| BshFI | GGCC | 1 cut(s) | 1177 |
| BsiEI | CGRYCG | 1 cut(s) | 940 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1113 |
| BsiHKCI | CYCGRG | 1 cut(s) | 92 |
| BslFI | GGGAC | 1 cut(s) | 1099 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 187, 1138 |
| BsmAI | GTCTC | 4 cut(s) | 91, 145, 899, 1226 |
| BsmFI | GGGAC | 1 cut(s) | 1099 |
| BsnI | GGCC | 1 cut(s) | 1177 |
| Bso31I | GGTCTC | 1 cut(s) | 899 |
| BsoBI | CYCGRG | 1 cut(s) | 92 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1113 |
| Bsp1407I | TGTACA | 1 cut(s) | 253 |
| Bsp143I | GATC | 3 cut(s) | 412, 565, 627 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1262 |
| Bsp19I | CCATGG | 2 cut(s) | 160, 183 |
| BspACI | CCGC | 5 cut(s) | 385, 1023, 1138, 1162, 1196 |
| BspANI | GGCC | 1 cut(s) | 1177 |
| BspCNI | CTCAG | 3 cut(s) | 369, 538, 1230 |
| BspHI | TCATGA | 1 cut(s) | 912 |
| BspLI | GGNNCC | 1 cut(s) | 1065 |
| BspMAI | CTGCAG | 3 cut(s) | 902, 1021, 1118 |
| BspMI | ACCTGC | 2 cut(s) | 216, 698 |
| BspTI | CTTAAG | 1 cut(s) | 1151 |
| BspTNI | GGTCTC | 1 cut(s) | 899 |
| BsrDI | GCAATG | 1 cut(s) | 876 |
| BsrGI | TGTACA | 1 cut(s) | 253 |
| BsrI | ACTGG | 1 cut(s) | 1132 |
| BssECI | CCNNGG | 2 cut(s) | 160, 183 |
| BssMI | GATC | 3 cut(s) | 412, 565, 627 |
| BssT1I | CCWWGG | 2 cut(s) | 160, 183 |
| Bst2UI | CCWGG | 1 cut(s) | 1174 |
| Bst4CI | ACNGT | 5 cut(s) | 216, 696, 865, 941, 1060 |
| Bst6I | CTCTTC | 1 cut(s) | 399 |
| BstAFI | CTTAAG | 1 cut(s) | 1151 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1025 |
| BstAUI | TGTACA | 1 cut(s) | 253 |
| BstDEI | CTNAG | 7 cut(s) | 101, 132, 377, 546, 1182, 1217, 1262 |
| BstDSI | CCRYGG | 2 cut(s) | 160, 183 |
| BstF5I | GGATG | 4 cut(s) | 355, 441, 459, 967 |
| BstHHI | GCGC | 1 cut(s) | 288 |
| BstKTI | GATC | 3 cut(s) | 415, 568, 630 |
| BstMAI | GTCTC | 4 cut(s) | 91, 145, 899, 1226 |
| BstMBI | GATC | 3 cut(s) | 412, 565, 627 |
| BstMCI | CGRYCG | 1 cut(s) | 940 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 275, 1025, 1135 |
| BstNI | CCWGG | 1 cut(s) | 1174 |
| BstSCI | CCNGG | 1 cut(s) | 1172 |
| BstSFI | CTRYAG | 4 cut(s) | 702, 898, 1017, 1114 |
| BstV1I | GCAGC | 5 cut(s) | 957, 1012, 1031, 1061, 1128 |
| BstV2I | GAAGAC | 2 cut(s) | 956, 1232 |
| BsuI | GTATCC | 1 cut(s) | 75 |
| BsuRI | GGCC | 1 cut(s) | 1177 |
| BtgI | CCRYGG | 2 cut(s) | 160, 183 |
| BtsCI | GGATG | 4 cut(s) | 355, 441, 459, 967 |
| BtsI | GCAGTG | 1 cut(s) | 1111 |
| BtsIMutI | CAGTG | 5 cut(s) | 36, 513, 686, 1111, 1139 |
| BveI | ACCTGC | 2 cut(s) | 216, 698 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1025, 1074 |
| CciI | TCATGA | 1 cut(s) | 912 |
| CfoI | GCGC | 1 cut(s) | 288 |
| Cfr13I | GGNCC | 2 cut(s) | 149, 710 |
| Csp6I | GTAC | 4 cut(s) | 124, 254, 818, 1214 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 945, 980 |
| CviAII | CATG | 4 cut(s) | 161, 184, 432, 913 |
| CviQI | GTAC | 4 cut(s) | 124, 254, 818, 1214 |
| DdeI | CTNAG | 7 cut(s) | 101, 132, 377, 546, 1182, 1217, 1262 |
| DpnI | GATC | 3 cut(s) | 414, 567, 629 |
| DpnII | GATC | 3 cut(s) | 412, 565, 627 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1236 |
| EaeI | YGGCCR | 1 cut(s) | 1175 |
| Eam1104I | CTCTTC | 1 cut(s) | 399 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1236 |
| EarI | CTCTTC | 1 cut(s) | 399 |
| Eco130I | CCWWGG | 2 cut(s) | 160, 183 |
| Eco31I | GGTCTC | 1 cut(s) | 899 |
| Eco47I | GGWCC | 2 cut(s) | 149, 710 |
| Eco88I | CYCGRG | 1 cut(s) | 92 |
| EcoRII | CCWGG | 1 cut(s) | 1172 |
| EcoT14I | CCWWGG | 2 cut(s) | 160, 183 |
| ErhI | CCWWGG | 2 cut(s) | 160, 183 |
| FaeI | CATG | 4 cut(s) | 164, 187, 435, 916 |
| FaqI | GGGAC | 1 cut(s) | 1099 |
| FatI | CATG | 4 cut(s) | 160, 183, 431, 912 |
| FauI | CCCGC | 1 cut(s) | 1131 |
| Fnu4HI | GCNGC | 7 cut(s) | 971, 1020, 1023, 1026, 1075, 1117, 1197 |
| FokI | GGATG | 4 cut(s) | 362, 448, 466, 974 |
| Fsp4HI | GCNGC | 7 cut(s) | 971, 1020, 1023, 1026, 1075, 1117, 1197 |
| FspBI | CTAG | 1 cut(s) | 1211 |
| FspI | TGCGCA | 1 cut(s) | 287 |
| GlaI | GCGC | 1 cut(s) | 287 |
| GluI | GCNGC | 7 cut(s) | 971, 1020, 1023, 1026, 1075, 1117, 1197 |
| GsaI | CCCAGC | 1 cut(s) | 735 |
| GsuI | CTGGAG | 1 cut(s) | 777 |
| HaeIII | GGCC | 1 cut(s) | 1177 |
| HhaI | GCGC | 1 cut(s) | 288 |
| Hin1II | CATG | 4 cut(s) | 164, 187, 435, 916 |
| Hin6I | GCGC | 1 cut(s) | 286 |
| HinP1I | GCGC | 1 cut(s) | 286 |
| HincII | GTYRAC | 1 cut(s) | 699 |
| HindII | GTYRAC | 1 cut(s) | 699 |
| HinfI | GANTC | 1 cut(s) | 381 |
| HphI | GGTGA | 2 cut(s) | 34, 149 |
| Hpy166II | GTNNAC | 5 cut(s) | 126, 152, 238, 256, 699 |
| Hpy188I | TCNGA | 4 cut(s) | 228, 403, 547, 714 |
| Hpy188III | TCNNGA | 4 cut(s) | 92, 497, 913, 992 |
| Hpy8I | GTNNAC | 5 cut(s) | 126, 152, 238, 256, 699 |
| Hpy99I | CGWCG | 1 cut(s) | 228 |
| HpyAV | CCTTC | 2 cut(s) | 367, 608 |
| HpyCH4III | ACNGT | 5 cut(s) | 216, 696, 865, 941, 1060 |
| HpyCH4IV | ACGT | 2 cut(s) | 223, 634 |
| HpyCH4V | TGCA | 7 cut(s) | 75, 211, 299, 598, 900, 1019, 1116 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 275, 1025, 1135 |
| HpyF3I | CTNAG | 7 cut(s) | 101, 132, 377, 546, 1182, 1217, 1262 |
| HpySE526I | ACGT | 2 cut(s) | 223, 634 |
| Hsp92II | CATG | 4 cut(s) | 164, 187, 435, 916 |
| HspAI | GCGC | 1 cut(s) | 286 |
| Kzo9I | GATC | 3 cut(s) | 412, 565, 627 |
| LmnI | GCTCC | 4 cut(s) | 40, 190, 967, 1069 |
| Lsp1109I | GCAGC | 5 cut(s) | 957, 1012, 1031, 1061, 1128 |
| LweI | GCATC | 2 cut(s) | 539, 744 |
| MaeI | CTAG | 1 cut(s) | 1211 |
| MaeII | ACGT | 2 cut(s) | 223, 634 |
| MaeIII | GTNAC | 3 cut(s) | 320, 744, 785 |
| MalI | GATC | 3 cut(s) | 414, 567, 629 |
| MboI | GATC | 3 cut(s) | 412, 565, 627 |
| MboII | GAAGA | 9 cut(s) | 18, 416, 455, 481, 574, 630, 674, 961, 1232 |
| MfeI | CAATTG | 2 cut(s) | 17, 306 |
| MhlI | GDGCHC | 1 cut(s) | 1113 |
| MlsI | TGGCCA | 1 cut(s) | 1177 |
| MluNI | TGGCCA | 1 cut(s) | 1177 |
| MmeI | TCCRAC | 1 cut(s) | 206 |
| MnlI | CCTC | 8 cut(s) | 31, 78, 181, 238, 361, 493, 543, 1064 |
| Mox20I | TGGCCA | 1 cut(s) | 1177 |
| MscI | TGGCCA | 1 cut(s) | 1177 |
| MseI | TTAA | 3 cut(s) | 768, 1035, 1152 |
| Msp20I | TGGCCA | 1 cut(s) | 1177 |
| MspA1I | CMGCKG | 1 cut(s) | 1025 |
| MspCI | CTTAAG | 1 cut(s) | 1151 |
| MspR9I | CCNGG | 1 cut(s) | 1174 |
| MunI | CAATTG | 2 cut(s) | 17, 306 |
| MvaI | CCWGG | 1 cut(s) | 1174 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 275, 1025, 1135 |
| NcoI | CCATGG | 2 cut(s) | 160, 183 |
| NdeII | GATC | 3 cut(s) | 412, 565, 627 |
| NlaIII | CATG | 4 cut(s) | 164, 187, 435, 916 |
| NlaIV | GGNNCC | 1 cut(s) | 1065 |
| NmuCI | GTSAC | 1 cut(s) | 320 |
| NsbI | TGCGCA | 1 cut(s) | 287 |
| PagI | TCATGA | 1 cut(s) | 912 |
| PfeI | GAWTC | 1 cut(s) | 381 |
| PkrI | GCNGC | 7 cut(s) | 972, 1021, 1024, 1027, 1076, 1118, 1198 |
| Psp6I | CCWGG | 1 cut(s) | 1172 |
| PspFI | CCCAGC | 1 cut(s) | 731 |
| PspGI | CCWGG | 1 cut(s) | 1172 |
| PspN4I | GGNNCC | 1 cut(s) | 1065 |
| PspPI | GGNCC | 2 cut(s) | 149, 710 |
| PstI | CTGCAG | 3 cut(s) | 902, 1021, 1118 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1025, 1074 |
| RsaI | GTAC | 4 cut(s) | 125, 255, 819, 1215 |
| RsaNI | GTAC | 4 cut(s) | 124, 254, 818, 1214 |
| SaqAI | TTAA | 3 cut(s) | 768, 1035, 1152 |
| SatI | GCNGC | 7 cut(s) | 971, 1020, 1023, 1026, 1075, 1117, 1197 |
| Sau3AI | GATC | 3 cut(s) | 412, 565, 627 |
| Sau96I | GGNCC | 2 cut(s) | 149, 710 |
| ScaI | AGTACT | 1 cut(s) | 1215 |
| ScrFI | CCNGG | 1 cut(s) | 1174 |
| SduI | GDGCHC | 1 cut(s) | 1113 |
| SfaNI | GCATC | 2 cut(s) | 539, 744 |
| SfcI | CTRYAG | 4 cut(s) | 702, 898, 1017, 1114 |
| SinI | GGWCC | 2 cut(s) | 149, 710 |
| SmlI | CTYRAG | 3 cut(s) | 497, 642, 1151 |
| SmoI | CTYRAG | 3 cut(s) | 497, 642, 1151 |
| SsiI | CCGC | 5 cut(s) | 385, 1023, 1138, 1162, 1196 |
| SspMI | CTAG | 1 cut(s) | 1211 |
| StyD4I | CCNGG | 1 cut(s) | 1172 |
| StyI | CCWWGG | 2 cut(s) | 160, 183 |
| TaaI | ACNGT | 5 cut(s) | 216, 696, 865, 941, 1060 |
| TaiI | ACGT | 2 cut(s) | 226, 637 |
| TaqI | TCGA | 4 cut(s) | 510, 779, 822, 936 |
| TatI | WGTACW | 2 cut(s) | 253, 1213 |
| TauI | GCSGC | 2 cut(s) | 1025, 1199 |
| TfiI | GAWTC | 1 cut(s) | 381 |
| Tru1I | TTAA | 3 cut(s) | 768, 1035, 1152 |
| Tru9I | TTAA | 3 cut(s) | 768, 1035, 1152 |
| TscAI | CASTG | 5 cut(s) | 36, 520, 693, 1118, 1139 |
| TseFI | GTSAC | 1 cut(s) | 320 |
| TseI | GCWGC | 5 cut(s) | 970, 1019, 1025, 1074, 1116 |
| Tsp45I | GTSAC | 1 cut(s) | 320 |
| TspDTI | ATGAA | 6 cut(s) | 349, 481, 796, 864, 919, 999 |
| TspRI | CASTG | 5 cut(s) | 36, 520, 693, 1118, 1139 |
| Vha464I | CTTAAG | 1 cut(s) | 1151 |
| VpaK11BI | GGWCC | 2 cut(s) | 149, 710 |
| XapI | RAATTY | 3 cut(s) | 522, 825, 987 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1131 |
| XspI | CTAG | 1 cut(s) | 1211 |
| ZrmI | AGTACT | 1 cut(s) | 1215 |