Rw6G034100

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000131
Physical Location & Seq
Forward (+)
58609523 .. 58612835
3313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G034100.1

Sequence Viewer

Length: 1386 bp
ATGGAAGATGAAAGCAGCTATCAAGTTCCACATGACATAGAAAACCCACACACTCCACTAGTGACTTCGATGAGAAGTATGCTGTATAACTTGTCTCCTTTATCTTCTTCTTGCTGTATCTGCAGAGTTCCTAAGCGCCTACGTCGTGTTAGTGAAATGGCCTACACACCTCAAGTAGTCTCTATAGGGCCCCTTCACCACGGCAAGGAAGGGTTAAAGCCCATGGAGGAGCACAAAAATAGGTACCTCCAAGATTTTCTAGTCCGAACCAATCTAAGCTTGGAGCATTACATTAACAAAATAAGGGGCAGAGAAGCAGAATTGCGTGGTTGTTACGCAGAAACCATTCAATTCGACAGTGATGAATTTGTAAGAATTGTCCTAGTGGATGCCGCTTTCATCATTGAGGTCTTATTGAGGTACCATTTCCATGAGTTGCAGGATGAGAATGATCGCATCTTCAAGAAACCAAGGATGTTTGAGGATGTATGGCCTGATATGCGGATGCTTGAAAATCAGCTTCCATTCTTTATCCTTCAGGATCTTTTCGACCCCGAAAGGATTCAAATACCTTCTGTGGAGAATCTCTCAATAATCAATCTTTCTTACACTTTCTTCAGAGCTCTAATGAATATAGAGGAACTGGAAGATACTTTGGAGACAATAATTTCTTCTGCTATAGAACATTTTGTTGATTTTGTCAGAAAATTGTATCCACCACCACCACTAAAGGTAGCAAGAGCTAGAGGCCAACCCAAATCTCCAACTGGAGCCAGCATGAGACAACTATCAACATTTGAAGTACCACAAGGTCGAGGCCAACCTGAAATTCCAACCACACCAAGCATGACAGAGCTATACAGGGCAGGAGTCAAGTTTAAAGTGGGATCAGGTAAAAATATGTTTGACATTCGATTCAAAGATGGGACCTTGCAAATTCCAAAAATAACAATAAGTGATCAATCAGAGGTGAATCTCACAAATCTCCTTGTGTTTGAACAAAGCCAATGCAAGGAGACGGAGAATTACATAAATGATTATGTTGGCATCTTAAACATTCTTGTCAACACCCCTGAGGATGTGTCATTGCTTGTTAAGAATGCAATCTTAGTGAACAAGTTAGGTGACAGCAAGAAAGGCTGTACTATGATTAAGAATATGGGTGACGGGGTCAATATTGCGGACTACAGCAAGTTCCATTTTGCTCCTCTTTGTGAAAAGCTGAACGAGCACTGCACAAAGTCGAGGCACAAATGGCTGGCACTGTTGAAGCAAAATTATTTCAACACACCTTGCAAAACTATTTCTGTCATCGCAGCTGCTTGTATAATCCTATTCACTCTCATACAGACGGTGTCCTCTATTATTTCTGTTCGTTCTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

461

Amino Acids

52.84

Weight (kDa)

6.48

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 40 - 445 8e-107 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 243, 420
AccB1I GGYRCC 2 cut(s) 243, 420
AciI CCGC 3 cut(s) 393, 502, 1181
AclWI GGATC 2 cut(s) 549, 895
AcsI RAATTY 3 cut(s) 365, 828, 936
AcuI CTGAAG 2 cut(s) 521, 601
AfaI GTAC 4 cut(s) 245, 422, 804, 1144
AfiI CCNNNNNNNGG 2 cut(s) 205, 1012
AgsI TTSAA 9 cut(s) 350, 463, 512, 566, 800, 919, 998, 1270, 1285
AhlI ACTAGT 1 cut(s) 58
AjuI GAANNNNNNNTTGG 2 cut(s) 813, 845
AluBI AGCT 8 cut(s) 18, 279, 520, 623, 743, 856, 1222, 1319
AluI AGCT 8 cut(s) 18, 279, 520, 623, 743, 856, 1222, 1319
Alw21I GWGCWC 3 cut(s) 234, 625, 1233
Alw26I GTCTC 5 cut(s) 99, 184, 653, 775, 1010
AlwI GGATC 2 cut(s) 549, 895
AoxI GGCC 5 cut(s) 159, 188, 491, 748, 817
ApaI GGGCCC 1 cut(s) 192
ApeKI GCWGC 3 cut(s) 15, 1316, 1319
ApoI RAATTY 3 cut(s) 365, 828, 936
Asp700I GAANNNNTTC 2 cut(s) 345, 561
Asp718I GGTACC 2 cut(s) 243, 420
AspLEI GCGC 1 cut(s) 138
AspS9I GGNCC 3 cut(s) 188, 189, 927
AsuHPI GGTGA 4 cut(s) 188, 982, 1136, 1175
AvaII GGWCC 1 cut(s) 927
AxyI CCTNAGG 1 cut(s) 1074
BaeGI GKGCMC 1 cut(s) 192
BanI GGYRCC 2 cut(s) 243, 420
BanII GRGCYC 2 cut(s) 192, 625
Bbv12I GWGCWC 3 cut(s) 234, 625, 1233
BbvI GCAGC 3 cut(s) 27, 1306, 1328
BccI CCATC 1 cut(s) 917
BceAI ACGGC 1 cut(s) 217
BciVI GTATCC 1 cut(s) 723
BclI TGATCA 1 cut(s) 958
BcoDI GTCTC 5 cut(s) 99, 184, 653, 775, 1010
BcuI ACTAGT 1 cut(s) 58
BfaI CTAG 4 cut(s) 59, 260, 383, 744
BfmI CTRYAG 4 cut(s) 121, 183, 678, 1186
BfoI RGCGCY 1 cut(s) 139
BfuI GTATCC 1 cut(s) 723
BisI GCNGC 4 cut(s) 16, 393, 1317, 1320
BlsI GCNGC 4 cut(s) 17, 394, 1318, 1321
Bme18I GGWCC 1 cut(s) 927
BmgT120I GGNCC 3 cut(s) 188, 189, 927
BmiI GGNNCC 6 cut(s) 190, 191, 245, 422, 772, 928
BmsI GCATC 4 cut(s) 379, 465, 495, 1056
BplI GAGNNNNNCTC 2 cut(s) 572, 604
BpmI CTGGAG 1 cut(s) 789
Bpu10I CCTNAGC 1 cut(s) 132
BpuEI CTTGAG 1 cut(s) 156
BsaJI CCNNGG 3 cut(s) 199, 222, 470
Bsc4I CCNNNNNNNGG 2 cut(s) 205, 1012
Bse1I ACTGG 2 cut(s) 648, 772
Bse21I CCTNAGG 1 cut(s) 1074
Bse3DI GCAATG 1 cut(s) 1085
BseDI CCNNGG 3 cut(s) 199, 222, 470
BseGI GGATG 6 cut(s) 394, 448, 480, 490, 510, 1084
BseLI CCNNNNNNNGG 2 cut(s) 205, 1012
BseMI GCAATG 1 cut(s) 1085
BseMII CTCAG 1 cut(s) 1065
BseNI ACTGG 2 cut(s) 648, 772
BseRI GAGGAG 2 cut(s) 242, 1197
BseSI GKGCMC 1 cut(s) 192
BseXI GCAGC 3 cut(s) 27, 1306, 1328
BsgI GTGCAG 1 cut(s) 1219
BshFI GGCC 5 cut(s) 161, 190, 493, 750, 819
BshNI GGYRCC 2 cut(s) 243, 420
BsiHKAI GWGCWC 3 cut(s) 234, 625, 1233
BslFI GGGAC 1 cut(s) 940
BslI CCNNNNNNNGG 2 cut(s) 205, 1012
BsmAI GTCTC 5 cut(s) 99, 184, 653, 775, 1010
BsmBI CGTCTC 1 cut(s) 1010
BsmFI GGGAC 1 cut(s) 940
BsmI GAATGC 1 cut(s) 1105
BsnI GGCC 5 cut(s) 161, 190, 493, 750, 819
Bsp120I GGGCCC 1 cut(s) 188
Bsp1286I GDGCHC 4 cut(s) 192, 234, 625, 1233
Bsp143I GATC 4 cut(s) 451, 541, 887, 958
Bsp19I CCATGG 1 cut(s) 222
BspACI CCGC 3 cut(s) 393, 502, 1181
BspANI GGCC 5 cut(s) 161, 190, 493, 750, 819
BspCNI CTCAG 1 cut(s) 1066
BspLI GGNNCC 6 cut(s) 190, 191, 245, 422, 772, 928
BspMAI CTGCAG 1 cut(s) 125
BspPI GGATC 2 cut(s) 549, 895
BspT107I GGYRCC 2 cut(s) 243, 420
BsrDI GCAATG 1 cut(s) 1085
BsrI ACTGG 2 cut(s) 648, 772
BssECI CCNNGG 3 cut(s) 199, 222, 470
BssMI GATC 4 cut(s) 451, 541, 887, 958
BssT1I CCWWGG 2 cut(s) 222, 470
Bst4CI ACNGT 3 cut(s) 359, 1266, 1354
BstC8I GCNNGC 2 cut(s) 775, 1260
BstDEI CTNAG 4 cut(s) 132, 275, 1074, 1108
BstDSI CCRYGG 2 cut(s) 199, 222
BstF5I GGATG 6 cut(s) 394, 448, 480, 490, 510, 1084
BstH2I RGCGCY 1 cut(s) 139
BstHHI GCGC 1 cut(s) 138
BstKTI GATC 4 cut(s) 454, 544, 890, 961
BstMAI GTCTC 5 cut(s) 99, 184, 653, 775, 1010
BstMBI GATC 4 cut(s) 451, 541, 887, 958
BstMWI GCNNNNNNNGC 5 cut(s) 120, 499, 1137, 1228, 1255
BstSFI CTRYAG 4 cut(s) 121, 183, 678, 1186
BstSLI GKGCMC 1 cut(s) 192
BstV1I GCAGC 3 cut(s) 27, 1306, 1328
BstX2I RGATCY 1 cut(s) 541
BstYI RGATCY 1 cut(s) 541
Bsu36I CCTNAGG 1 cut(s) 1074
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 5 cut(s) 161, 190, 493, 750, 819
BtgI CCRYGG 2 cut(s) 199, 222
BtgZI GCGATG 1 cut(s) 1297
BtsCI GGATG 6 cut(s) 394, 448, 480, 490, 510, 1084
BtsI GCAGTG 1 cut(s) 1231
BtsIMutI CAGTG 3 cut(s) 364, 1231, 1262
Cac8I GCNNGC 2 cut(s) 775, 1260
CfoI GCGC 1 cut(s) 138
Cfr13I GGNCC 3 cut(s) 188, 189, 927
Csp6I GTAC 4 cut(s) 244, 421, 803, 1143
CviAII CATG 5 cut(s) 32, 223, 431, 778, 847
CviQI GTAC 4 cut(s) 244, 421, 803, 1143
DdeI CTNAG 4 cut(s) 132, 275, 1074, 1108
DpnI GATC 4 cut(s) 453, 543, 889, 960
DpnII GATC 4 cut(s) 451, 541, 887, 958
DraI TTTAAA 1 cut(s) 880
Ecl136II GAGCTC 1 cut(s) 623
Eco130I CCWWGG 2 cut(s) 222, 470
Eco24I GRGCYC 2 cut(s) 192, 625
Eco47I GGWCC 1 cut(s) 927
Eco53kI GAGCTC 1 cut(s) 623
Eco57I CTGAAG 2 cut(s) 521, 601
Eco81I CCTNAGG 1 cut(s) 1074
EcoICRI GAGCTC 1 cut(s) 623
EcoO109I RGGNCCY 3 cut(s) 188, 189, 927
EcoT14I CCWWGG 2 cut(s) 222, 470
EcoT38I GRGCYC 2 cut(s) 192, 625
ErhI CCWWGG 2 cut(s) 222, 470
Esp3I CGTCTC 1 cut(s) 1010
FaeI CATG 5 cut(s) 35, 226, 434, 781, 850
FaqI GGGAC 1 cut(s) 940
FatI CATG 5 cut(s) 31, 222, 430, 777, 846
FbaI TGATCA 1 cut(s) 958
Fnu4HI GCNGC 4 cut(s) 16, 393, 1317, 1320
FokI GGATG 6 cut(s) 401, 455, 487, 497, 517, 1091
FriOI GRGCYC 2 cut(s) 192, 625
Fsp4HI GCNGC 4 cut(s) 16, 393, 1317, 1320
FspBI CTAG 4 cut(s) 59, 260, 383, 744
GlaI GCGC 1 cut(s) 137
GluI GCNGC 4 cut(s) 16, 393, 1317, 1320
GsuI CTGGAG 1 cut(s) 789
HaeII RGCGCY 1 cut(s) 139
HaeIII GGCC 5 cut(s) 161, 190, 493, 750, 819
HhaI GCGC 1 cut(s) 138
Hin1II CATG 5 cut(s) 35, 226, 434, 781, 850
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HincII GTYRAC 1 cut(s) 1066
HindII GTYRAC 1 cut(s) 1066
HindIII AAGCTT 1 cut(s) 277
HinfI GANTC 5 cut(s) 562, 583, 870, 915, 973
HphI GGTGA 4 cut(s) 188, 982, 1136, 1175
Hpy166II GTNNAC 2 cut(s) 1066, 1114
Hpy188I TCNGA 4 cut(s) 266, 620, 704, 967
Hpy188III TCNNGA 2 cut(s) 463, 539
Hpy8I GTNNAC 2 cut(s) 1066, 1114
Hpy99I CGWCG 1 cut(s) 147
HpyAV CCTTC 4 cut(s) 203, 203, 545, 582
HpyCH4III ACNGT 3 cut(s) 359, 1266, 1354
HpyCH4IV ACGT 1 cut(s) 142
HpyCH4V TGCA 7 cut(s) 123, 439, 934, 1011, 1103, 1236, 1296
HpyF10VI GCNNNNNNNGC 5 cut(s) 120, 499, 1137, 1228, 1255
HpyF3I CTNAG 4 cut(s) 132, 275, 1074, 1108
HpySE526I ACGT 1 cut(s) 142
Hsp92II CATG 5 cut(s) 35, 226, 434, 781, 850
HspAI GCGC 1 cut(s) 136
KpnI GGTACC 2 cut(s) 247, 424
Ksp22I TGATCA 1 cut(s) 958
Kzo9I GATC 4 cut(s) 451, 541, 887, 958
LmnI GCTCC 4 cut(s) 229, 283, 770, 1210
Lsp1109I GCAGC 3 cut(s) 27, 1306, 1328
LweI GCATC 4 cut(s) 379, 465, 495, 1056
MaeI CTAG 4 cut(s) 59, 260, 383, 744
MaeII ACGT 1 cut(s) 142
MaeIII GTNAC 4 cut(s) 61, 332, 1124, 1163
MalI GATC 4 cut(s) 453, 543, 889, 960
MboI GATC 4 cut(s) 451, 541, 887, 958
MboII GAAGA 7 cut(s) 17, 96, 99, 451, 607, 659, 663
MflI RGATCY 1 cut(s) 541
MhlI GDGCHC 4 cut(s) 192, 234, 625, 1233
MlyI GAGTC 1 cut(s) 879
MmeI TCCRAC 2 cut(s) 788, 857
MroXI GAANNNNTTC 2 cut(s) 345, 561
MseI TTAA 6 cut(s) 215, 294, 879, 1052, 1095, 1152
MslI CAYNNNNRTG 1 cut(s) 429
MspA1I CMGCKG 1 cut(s) 1319
Mva1269I GAATGC 1 cut(s) 1105
MwoI GCNNNNNNNGC 5 cut(s) 120, 499, 1137, 1228, 1255
NcoI CCATGG 1 cut(s) 222
NdeII GATC 4 cut(s) 451, 541, 887, 958
NlaIII CATG 5 cut(s) 35, 226, 434, 781, 850
NlaIV GGNNCC 6 cut(s) 190, 191, 245, 422, 772, 928
NmuCI GTSAC 3 cut(s) 61, 1124, 1163
PctI GAATGC 1 cut(s) 1105
PdmI GAANNNNTTC 2 cut(s) 345, 561
PfeI GAWTC 4 cut(s) 562, 583, 915, 973
PflFI GACNNNGTC 2 cut(s) 1169, 1354
PkrI GCNGC 4 cut(s) 17, 394, 1318, 1321
PleI GAGTC 1 cut(s) 878
PpsI GAGTC 1 cut(s) 878
PpuMI RGGWCCY 1 cut(s) 927
Psp124BI GAGCTC 1 cut(s) 625
Psp5II RGGWCCY 1 cut(s) 927
PspN4I GGNNCC 6 cut(s) 190, 191, 245, 422, 772, 928
PspOMI GGGCCC 1 cut(s) 188
PspPI GGNCC 3 cut(s) 188, 189, 927
PspPPI RGGWCCY 1 cut(s) 927
PstI CTGCAG 1 cut(s) 125
PsuI RGATCY 1 cut(s) 541
PsyI GACNNNGTC 2 cut(s) 1169, 1354
PvuII CAGCTG 1 cut(s) 1319
RsaI GTAC 4 cut(s) 245, 422, 804, 1144
RsaNI GTAC 4 cut(s) 244, 421, 803, 1143
RseI CAYNNNNRTG 1 cut(s) 429
SacI GAGCTC 1 cut(s) 625
SaqAI TTAA 6 cut(s) 215, 294, 879, 1052, 1095, 1152
SatI GCNGC 4 cut(s) 16, 393, 1317, 1320
Sau3AI GATC 4 cut(s) 451, 541, 887, 958
Sau96I GGNCC 3 cut(s) 188, 189, 927
SchI GAGTC 1 cut(s) 879
SduI GDGCHC 4 cut(s) 192, 234, 625, 1233
SfaNI GCATC 4 cut(s) 379, 465, 495, 1056
SfcI CTRYAG 4 cut(s) 121, 183, 678, 1186
SinI GGWCC 1 cut(s) 927
SmiMI CAYNNNNRTG 1 cut(s) 429
SmlI CTYRAG 1 cut(s) 171
SmoI CTYRAG 1 cut(s) 171
SpeI ACTAGT 1 cut(s) 58
SsiI CCGC 3 cut(s) 393, 502, 1181
SspI AATATT 1 cut(s) 1177
SspMI CTAG 4 cut(s) 59, 260, 383, 744
SstI GAGCTC 1 cut(s) 625
StyI CCWWGG 2 cut(s) 222, 470
TaaI ACNGT 3 cut(s) 359, 1266, 1354
TaiI ACGT 1 cut(s) 145
TaqI TCGA 6 cut(s) 68, 354, 549, 814, 913, 1244
TatI WGTACW 1 cut(s) 1142
TauI GCSGC 1 cut(s) 395
TfiI GAWTC 4 cut(s) 562, 583, 915, 973
Tru1I TTAA 6 cut(s) 215, 294, 879, 1052, 1095, 1152
Tru9I TTAA 6 cut(s) 215, 294, 879, 1052, 1095, 1152
TscAI CASTG 3 cut(s) 364, 1238, 1269
TseFI GTSAC 3 cut(s) 61, 1124, 1163
TseI GCWGC 3 cut(s) 15, 1316, 1319
Tsp45I GTSAC 3 cut(s) 61, 1124, 1163
TspDTI ATGAA 4 cut(s) 24, 378, 388, 644
TspGWI ACGGA 1 cut(s) 1034
TspRI CASTG 3 cut(s) 364, 1238, 1269
Tth111I GACNNNGTC 2 cut(s) 1169, 1354
VpaK11BI GGWCC 1 cut(s) 927
XapI RAATTY 3 cut(s) 365, 828, 936
XcmI CCANNNNNNNNNTGG 1 cut(s) 277
XmnI GAANNNNTTC 2 cut(s) 345, 561
XspI CTAG 4 cut(s) 59, 260, 383, 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.