Rmu_sc0035583.1_g000001

Plant protein of unknown function

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035583.1
Physical Location & Seq
Forward (+)
2021 .. 2437
417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0035583.1_g000001.1.cds

Sequence Viewer

Length: 417 bp
atggaagaagaaagctggaatcaagctccgtatgacatagaaaacccctatatcccactagcaacttccataacaaaagacttggatagcttgtctccgttgtcctctgaatgttgtatatacagagttcccaagcggctacgctatgtaagtgaaaatgcctacacccctaaggtggtctttatcggcccacttcaccatggcaaggaaggcttgaatggaatggaagagcaaaagaagaggtacctacaggattttcaagttcggacacaagtgagtttggaggactatatcaagagaataaaggagaaggaagcaagactacgcagtcgttatgcagaaccgatcaagttgagcagtgatgaatttgtaacagttattctgtggacaccacgttcgtcattgagatcttgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

138

Amino Acids

16.14

Weight (kDa)

7.68

Isoelectric Point (pI)

64.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 327
Acc65I GGTACC 1 cut(s) 243
AccB1I GGYRCC 1 cut(s) 243
AciI CCGC 1 cut(s) 136
AcsI RAATTY 1 cut(s) 365
AfaI GTAC 1 cut(s) 245
AfiI CCNNNNNNNGG 2 cut(s) 175, 205
AgsI TTSAA 2 cut(s) 217, 260
AloI GAACNNNNNNTCC 2 cut(s) 379, 411
AluBI AGCT 3 cut(s) 15, 26, 90
AluI AGCT 3 cut(s) 15, 26, 90
Alw26I GTCTC 1 cut(s) 99
AoxI GGCC 1 cut(s) 187
ApoI RAATTY 1 cut(s) 365
ArsI GACNNNNNNTTYG 2 cut(s) 379, 411
Asp718I GGTACC 1 cut(s) 243
AspS9I GGNCC 1 cut(s) 188
AsuHPI GGTGA 1 cut(s) 188
AxyI CCTNAGG 1 cut(s) 171
BanI GGYRCC 1 cut(s) 243
BarI GAAGNNNNNNTAC 2 cut(s) 306, 338
BcoDI GTCTC 1 cut(s) 99
BfaI CTAG 1 cut(s) 59
BfmI CTRYAG 1 cut(s) 248
BglII AGATCT 1 cut(s) 407
BisI GCNGC 1 cut(s) 137
BlsI GCNGC 1 cut(s) 138
BmgT120I GGNCC 1 cut(s) 188
BmiI GGNNCC 1 cut(s) 245
BsaJI CCNNGG 1 cut(s) 199
Bsc4I CCNNNNNNNGG 2 cut(s) 175, 205
Bse21I CCTNAGG 1 cut(s) 171
BseDI CCNNGG 1 cut(s) 199
BseLI CCNNNNNNNGG 2 cut(s) 175, 205
BshFI GGCC 1 cut(s) 189
BshNI GGYRCC 1 cut(s) 243
BslI CCNNNNNNNGG 2 cut(s) 175, 205
BsmAI GTCTC 1 cut(s) 99
BsnI GGCC 1 cut(s) 189
Bsp143I GATC 2 cut(s) 345, 407
Bsp19I CCATGG 1 cut(s) 199
BspACI CCGC 1 cut(s) 136
BspANI GGCC 1 cut(s) 189
BspLI GGNNCC 1 cut(s) 245
BspQI GCTCTTC 1 cut(s) 222
BspT107I GGYRCC 1 cut(s) 243
BssECI CCNNGG 1 cut(s) 199
BssMI GATC 2 cut(s) 345, 407
BssT1I CCWWGG 1 cut(s) 199
Bst4CI ACNGT 1 cut(s) 376
Bst6I CTCTTC 2 cut(s) 222, 233
BstDEI CTNAG 1 cut(s) 171
BstDSI CCRYGG 1 cut(s) 199
BstKTI GATC 2 cut(s) 348, 410
BstMAI GTCTC 1 cut(s) 99
BstMBI GATC 2 cut(s) 345, 407
BstMWI GCNNNNNNNGC 1 cut(s) 210
BstSFI CTRYAG 1 cut(s) 248
BstX2I RGATCY 1 cut(s) 407
BstYI RGATCY 1 cut(s) 407
Bsu36I CCTNAGG 1 cut(s) 171
BsuRI GGCC 1 cut(s) 189
BtgI CCRYGG 1 cut(s) 199
BtsI GCAGTG 1 cut(s) 364
BtsIMutI CAGTG 1 cut(s) 364
Cfr13I GGNCC 1 cut(s) 188
Csp6I GTAC 1 cut(s) 244
CviAII CATG 1 cut(s) 200
CviJI RGCY 6 cut(s) 15, 26, 90, 139, 189, 213
CviKI_1 RGCY 6 cut(s) 15, 26, 90, 139, 189, 213
CviQI GTAC 1 cut(s) 244
DdeI CTNAG 1 cut(s) 171
DpnI GATC 2 cut(s) 347, 409
DpnII GATC 2 cut(s) 345, 407
DrdI GACNNNNNNGTC 1 cut(s) 327
DseDI GACNNNNNNGTC 1 cut(s) 327
Eam1104I CTCTTC 2 cut(s) 222, 233
EarI CTCTTC 2 cut(s) 222, 233
Eco130I CCWWGG 1 cut(s) 199
Eco81I CCTNAGG 1 cut(s) 171
EcoT14I CCWWGG 1 cut(s) 199
ErhI CCWWGG 1 cut(s) 199
FaeI CATG 1 cut(s) 203
FalI AAGNNNNNCTT 4 cut(s) 164, 196, 197, 229
FatI CATG 1 cut(s) 199
Fnu4HI GCNGC 1 cut(s) 137
Fsp4HI GCNGC 1 cut(s) 137
FspBI CTAG 1 cut(s) 59
GluI GCNGC 1 cut(s) 137
HaeIII GGCC 1 cut(s) 189
Hin1II CATG 1 cut(s) 203
HinfI GANTC 1 cut(s) 19
HphI GGTGA 1 cut(s) 188
Hpy166II GTNNAC 1 cut(s) 387
Hpy188I TCNGA 2 cut(s) 109, 267
Hpy188III TCNNGA 1 cut(s) 295
Hpy8I GTNNAC 1 cut(s) 387
HpyAV CCTTC 2 cut(s) 203, 304
HpyCH4III ACNGT 1 cut(s) 376
HpyCH4IV ACGT 1 cut(s) 394
HpyCH4V TGCA 1 cut(s) 338
HpyF10VI GCNNNNNNNGC 1 cut(s) 210
HpyF3I CTNAG 1 cut(s) 171
HpySE526I ACGT 1 cut(s) 394
Hsp92II CATG 1 cut(s) 203
KpnI GGTACC 1 cut(s) 247
Kzo9I GATC 2 cut(s) 345, 407
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 1 cut(s) 31
LpnPI CCDG 1 cut(s) 236
MaeI CTAG 1 cut(s) 59
MaeII ACGT 1 cut(s) 394
MaeIII GTNAC 1 cut(s) 370
MalI GATC 2 cut(s) 347, 409
MboI GATC 2 cut(s) 345, 407
MboII GAAGA 4 cut(s) 17, 20, 239, 250
MflI RGATCY 1 cut(s) 407
MluCI AATT 1 cut(s) 365
MnlI CCTC 3 cut(s) 115, 234, 277
MwoI GCNNNNNNNGC 1 cut(s) 210
NcoI CCATGG 1 cut(s) 199
NdeII GATC 2 cut(s) 345, 407
NlaIII CATG 1 cut(s) 203
NlaIV GGNNCC 1 cut(s) 245
PciSI GCTCTTC 1 cut(s) 222
PfeI GAWTC 1 cut(s) 19
PkrI GCNGC 1 cut(s) 138
PspN4I GGNNCC 1 cut(s) 245
PspPI GGNCC 1 cut(s) 188
PsuI RGATCY 1 cut(s) 407
RsaI GTAC 1 cut(s) 245
RsaNI GTAC 1 cut(s) 244
SapI GCTCTTC 1 cut(s) 222
SatI GCNGC 1 cut(s) 137
Sau3AI GATC 2 cut(s) 345, 407
Sau96I GGNCC 1 cut(s) 188
SetI ASST 7 cut(s) 17, 28, 92, 177, 245, 249, 397
SfcI CTRYAG 1 cut(s) 248
Sse9I AATT 1 cut(s) 365
SsiI CCGC 1 cut(s) 136
SspMI CTAG 1 cut(s) 59
StyI CCWWGG 1 cut(s) 199
TaaI ACNGT 1 cut(s) 376
TaiI ACGT 1 cut(s) 397
TasI AATT 1 cut(s) 365
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 1 cut(s) 19
TscAI CASTG 1 cut(s) 364
TspDTI ATGAA 1 cut(s) 378
TspGWI ACGGA 2 cut(s) 18, 87
TspRI CASTG 1 cut(s) 364
XapI RAATTY 1 cut(s) 365
XspI CTAG 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.