FvH4_2g29490

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000131
Physical Location & Seq
Forward (+)
22849046 .. 22852786
3741 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29490.t1

Sequence Viewer

Length: 1290 bp
ATGGTAGGAGGCAATCATGATGAGTTAGTAAGGTCAATGAGCCAGGTGTTGTATAGCTTAAGGTTTGAGCTATCATCTTCATGCTGCATTTACAGAGTTCCTAAGCGATTAAGGCGTGTAAGTGAAAATGCCTACACACCTCAGGTAGTCTCTATAGGCCCCCTTCACCATGGTAAGGAAAGCCTAAAGCCCATGGAAGAGCTCAAAAATAGGTACCTCAAAGTTTTTCTAAGTCGGACCCAGTTAACTGTGGAGGCTTTAATAGCAGTAATAAGGGAGAAAGAAGTAGCTCTGCGCAGCTGTTATGCAGAGACAATTGAGTTTACTAGTGATGAATTTGTGAGAATCATTCTAGTAGATGCCGTCTTCATCATTGAGGTCTTATTAAGGTTCCAAGACCATAATTGTCGAGAAGATAATGACCGCATATTTAGCAAACCATATATGTTACAGGATGTCTGGCCTGACATGCGGATGCTTGAAAATCAGCTGCCCTTCTTTATTCTTGACCATCTTTTCGAACCACACAAGGATACTCTCTCTGGGGGGAAGTCAATAATAGATCTCTCTCACCATTTCTTCAAAACTCTAATGCATATAGAGGTAGCAGAAGAAACTTTGAGGACAATAGATCCTCATGAAGTAGTACATTTTGTTGATTTCGTAAGAAAATTATATCCACTACCACCATGGAGATCAGAAAATCGACGGCCACCTGAAACCCTGGCCACACCAAGCATGACACAGCTATCCCGCGCAGGGGTCAAGTTTGAGGTGGGATCCAACACAAATATGTTTCAAGTTAAGTTCAAACATGGGACACTAGAAATGCCGAAACTCACGATAAGTGATCAGACAGAGGTAACAATCACAAATCTCCTGGCCTTTGAACAAAGCCAATGCAAGGACGAAGAGAAGTACATAAATGACTATTTCGTCTTCCTGAACTGTCTTGTAAACACCCATCAGGATGTTGCCTTGCTTGTCAAGTCTGGTATTCTTGACAATAAGCTAGGTGACAACAAAAAAGGGTTTACTCTGATCAAGAACCTTGTCGATGGAGTCGTGGACAACAAGGACTATTTCTACTTCATCAATCTTTGTGATGACCTGAACAAGTACTACACTATGGGGCGGCACCAATTGAAAGAATACCTGGTCACACATTTTTTATACTCACCCTGGGCAACTAAAGAAATCATTGCTGCTGTTATTTTCCTCTTCCTCACTCTCATACAGACTATGTTCTCTATTATGTCTTATTCTCACGACCTGAAGAGTAAAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

430

Amino Acids

50.02

Weight (kDa)

6.36

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 30 - 409 1.9e-107 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 935
Acc16I TGCGCA 1 cut(s) 296
Acc65I GGTACC 1 cut(s) 213
AccB1I GGYRCC 2 cut(s) 213, 1137
AccII CGCG 1 cut(s) 756
AciI CCGC 4 cut(s) 424, 472, 754, 1135
AclWI GGATC 3 cut(s) 626, 774, 787
AcoI YGGCCR 2 cut(s) 710, 726
AcsI RAATTY 1 cut(s) 335
AfaI GTAC 4 cut(s) 215, 648, 920, 1121
AfiI CCNNNNNNNGG 4 cut(s) 175, 759, 760, 904
AflII CTTAAG 1 cut(s) 58
AgsI TTSAA 6 cut(s) 482, 583, 800, 811, 890, 1147
AhlI ACTAGT 1 cut(s) 326
AjnI CCWGG 5 cut(s) 42, 723, 879, 1155, 1181
AluBI AGCT 8 cut(s) 57, 70, 202, 290, 300, 490, 748, 1012
AluI AGCT 8 cut(s) 57, 70, 202, 290, 300, 490, 748, 1012
Alw21I GWGCWC 1 cut(s) 204
Alw26I GTCTC 2 cut(s) 154, 305
AlwI GGATC 3 cut(s) 626, 774, 787
AoxI GGCC 5 cut(s) 157, 461, 710, 726, 882
ApeKI GCWGC 4 cut(s) 84, 297, 490, 1205
ApoI RAATTY 1 cut(s) 335
ArsI GACNNNNNNTTYG 2 cut(s) 500, 532
Asp718I GGTACC 1 cut(s) 213
AspLEI GCGC 2 cut(s) 297, 758
AspS9I GGNCC 2 cut(s) 158, 237
AsuHPI GGTGA 4 cut(s) 158, 563, 1028, 1170
AsuII TTCGAA 1 cut(s) 519
AvaII GGWCC 1 cut(s) 237
AxyI CCTNAGG 1 cut(s) 141
BalI TGGCCA 1 cut(s) 728
BamHI GGATCC 1 cut(s) 779
BanI GGYRCC 2 cut(s) 213, 1137
BanII GRGCYC 1 cut(s) 204
BbsI GAAGAC 2 cut(s) 358, 931
Bbv12I GWGCWC 1 cut(s) 204
BbvI GCAGC 4 cut(s) 71, 309, 477, 1192
BccI CCATC 3 cut(s) 519, 972, 1052
BceAI ACGGC 2 cut(s) 347, 725
BciT130I CCWGG 5 cut(s) 44, 725, 881, 1157, 1183
BciVI GTATCC 1 cut(s) 526
BclI TGATCA 2 cut(s) 850, 1041
BcoDI GTCTC 2 cut(s) 154, 305
BcuI ACTAGT 1 cut(s) 326
BfaI CTAG 4 cut(s) 327, 353, 824, 1013
BfmI CTRYAG 1 cut(s) 153
BfrI CTTAAG 1 cut(s) 58
BfuI GTATCC 1 cut(s) 526
BglII AGATCT 1 cut(s) 562
BisI GCNGC 5 cut(s) 85, 298, 491, 1136, 1206
BlsI GCNGC 5 cut(s) 86, 299, 492, 1137, 1207
BmcAI AGTACT 1 cut(s) 1121
Bme1390I CCNGG 5 cut(s) 44, 725, 881, 1157, 1183
Bme18I GGWCC 1 cut(s) 237
BmgT120I GGNCC 2 cut(s) 158, 237
BmiI GGNNCC 6 cut(s) 160, 215, 239, 392, 781, 1139
BmrFI CCNGG 5 cut(s) 44, 725, 881, 1157, 1183
BmrI ACTGGG 1 cut(s) 235
BmsI GCATC 2 cut(s) 349, 465
BmuI ACTGGG 1 cut(s) 235
BpiI GAAGAC 2 cut(s) 358, 931
Bpu10I CCTNAGC 1 cut(s) 102
Bpu14I TTCGAA 1 cut(s) 519
BsaJI CCNNGG 6 cut(s) 169, 192, 689, 723, 1181, 1182
Bsc4I CCNNNNNNNGG 4 cut(s) 175, 759, 760, 904
Bse1I ACTGG 1 cut(s) 241
Bse21I CCTNAGG 1 cut(s) 141
Bse3DI GCAATG 1 cut(s) 1200
BseBI CCWGG 5 cut(s) 44, 725, 881, 1157, 1183
BseDI CCNNGG 6 cut(s) 169, 192, 689, 723, 1181, 1182
BseGI GGATG 3 cut(s) 460, 480, 976
BseLI CCNNNNNNNGG 4 cut(s) 175, 759, 760, 904
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 1 cut(s) 155
BseNI ACTGG 1 cut(s) 241
BseXI GCAGC 4 cut(s) 71, 309, 477, 1192
Bsh1236I CGCG 1 cut(s) 756
BshFI GGCC 5 cut(s) 159, 463, 712, 728, 884
BshNI GGYRCC 2 cut(s) 213, 1137
BsiHKAI GWGCWC 1 cut(s) 204
BslFI GGGAC 1 cut(s) 832
BslI CCNNNNNNNGG 4 cut(s) 175, 759, 760, 904
BsmAI GTCTC 2 cut(s) 154, 305
BsmFI GGGAC 1 cut(s) 832
BsnI GGCC 5 cut(s) 159, 463, 712, 728, 884
Bsp119I TTCGAA 1 cut(s) 519
Bsp1286I GDGCHC 1 cut(s) 204
Bsp143I GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
Bsp19I CCATGG 3 cut(s) 169, 192, 689
BspACI CCGC 4 cut(s) 424, 472, 754, 1135
BspANI GGCC 5 cut(s) 159, 463, 712, 728, 884
BspCNI CTCAG 1 cut(s) 154
BspFNI CGCG 1 cut(s) 756
BspHI TCATGA 2 cut(s) 16, 637
BspLI GGNNCC 6 cut(s) 160, 215, 239, 392, 781, 1139
BspPI GGATC 3 cut(s) 626, 774, 787
BspQI GCTCTTC 1 cut(s) 192
BspT104I TTCGAA 1 cut(s) 519
BspT107I GGYRCC 2 cut(s) 213, 1137
BspTI CTTAAG 1 cut(s) 58
BsrDI GCAATG 1 cut(s) 1200
BsrI ACTGG 1 cut(s) 241
BssECI CCNNGG 6 cut(s) 169, 192, 689, 723, 1181, 1182
BssMI GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
BssT1I CCWWGG 3 cut(s) 169, 192, 689
Bst2UI CCWGG 5 cut(s) 44, 725, 881, 1157, 1183
Bst4CI ACNGT 2 cut(s) 250, 950
Bst6I CTCTTC 4 cut(s) 192, 906, 1226, 1271
BstAFI CTTAAG 1 cut(s) 58
BstBI TTCGAA 1 cut(s) 519
BstDEI CTNAG 3 cut(s) 102, 141, 230
BstDSI CCRYGG 3 cut(s) 169, 192, 689
BstF5I GGATG 3 cut(s) 460, 480, 976
BstFNI CGCG 1 cut(s) 756
BstHHI GCGC 2 cut(s) 297, 758
BstKTI GATC 6 cut(s) 565, 634, 698, 782, 853, 1044
BstMAI GTCTC 2 cut(s) 154, 305
BstMBI GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
BstMWI GCNNNNNNNGC 4 cut(s) 112, 263, 432, 469
BstNI CCWGG 5 cut(s) 44, 725, 881, 1157, 1183
BstNSI RCATGY 1 cut(s) 472
BstSCI CCNGG 5 cut(s) 42, 723, 879, 1155, 1181
BstSFI CTRYAG 1 cut(s) 153
BstUI CGCG 1 cut(s) 756
BstV1I GCAGC 4 cut(s) 71, 309, 477, 1192
BstV2I GAAGAC 2 cut(s) 358, 931
BstX2I RGATCY 3 cut(s) 562, 631, 779
BstYI RGATCY 3 cut(s) 562, 631, 779
Bsu36I CCTNAGG 1 cut(s) 141
BsuI GTATCC 1 cut(s) 526
BsuRI GGCC 5 cut(s) 159, 463, 712, 728, 884
BtgI CCRYGG 3 cut(s) 169, 192, 689
BtsCI GGATG 3 cut(s) 460, 480, 976
CciI TCATGA 2 cut(s) 16, 637
CfoI GCGC 2 cut(s) 297, 758
Cfr13I GGNCC 2 cut(s) 158, 237
CsiI ACCWGGT 1 cut(s) 1155
Csp6I GTAC 4 cut(s) 214, 647, 919, 1120
CviAII CATG 9 cut(s) 17, 81, 170, 193, 469, 638, 690, 739, 815
CviQI GTAC 4 cut(s) 214, 647, 919, 1120
DdeI CTNAG 3 cut(s) 102, 141, 230
DpnI GATC 6 cut(s) 564, 633, 697, 781, 852, 1043
DpnII GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
DrdI GACNNNNNNGTC 1 cut(s) 935
DseDI GACNNNNNNGTC 1 cut(s) 935
EaeI YGGCCR 2 cut(s) 710, 726
Eam1104I CTCTTC 4 cut(s) 192, 906, 1226, 1271
EarI CTCTTC 4 cut(s) 192, 906, 1226, 1271
Ecl136II GAGCTC 1 cut(s) 202
Eco130I CCWWGG 3 cut(s) 169, 192, 689
Eco24I GRGCYC 1 cut(s) 204
Eco47I GGWCC 1 cut(s) 237
Eco53kI GAGCTC 1 cut(s) 202
Eco81I CCTNAGG 1 cut(s) 141
EcoICRI GAGCTC 1 cut(s) 202
EcoO109I RGGNCCY 1 cut(s) 158
EcoRII CCWGG 5 cut(s) 42, 723, 879, 1155, 1181
EcoT14I CCWWGG 3 cut(s) 169, 192, 689
EcoT22I ATGCAT 1 cut(s) 597
EcoT38I GRGCYC 1 cut(s) 204
ErhI CCWWGG 3 cut(s) 169, 192, 689
FaeI CATG 9 cut(s) 20, 84, 173, 196, 472, 641, 693, 742, 818
FaqI GGGAC 1 cut(s) 832
FatI CATG 9 cut(s) 16, 80, 169, 192, 468, 637, 689, 738, 814
FauI CCCGC 1 cut(s) 761
FbaI TGATCA 2 cut(s) 850, 1041
Fnu4HI GCNGC 5 cut(s) 85, 298, 491, 1136, 1206
FokI GGATG 3 cut(s) 467, 487, 983
FriOI GRGCYC 1 cut(s) 204
Fsp4HI GCNGC 5 cut(s) 85, 298, 491, 1136, 1206
FspBI CTAG 4 cut(s) 327, 353, 824, 1013
FspI TGCGCA 1 cut(s) 296
GlaI GCGC 2 cut(s) 296, 757
GluI GCNGC 5 cut(s) 85, 298, 491, 1136, 1206
HaeIII GGCC 5 cut(s) 159, 463, 712, 728, 884
HhaI GCGC 2 cut(s) 297, 758
Hin1II CATG 9 cut(s) 20, 84, 173, 196, 472, 641, 693, 742, 818
Hin6I GCGC 2 cut(s) 295, 756
HinP1I GCGC 2 cut(s) 295, 756
HincII GTYRAC 1 cut(s) 246
HindII GTYRAC 1 cut(s) 246
HinfI GANTC 2 cut(s) 345, 1062
HpaI GTTAAC 1 cut(s) 246
HphI GGTGA 4 cut(s) 158, 563, 1028, 1170
Hpy166II GTNNAC 5 cut(s) 246, 324, 958, 1035, 1069
Hpy188I TCNGA 4 cut(s) 237, 700, 855, 1041
Hpy8I GTNNAC 5 cut(s) 246, 324, 958, 1035, 1069
Hpy99I CGWCG 1 cut(s) 711
HpyAV CCTTC 2 cut(s) 173, 505
HpyCH4III ACNGT 2 cut(s) 250, 950
HpyCH4V TGCA 4 cut(s) 87, 308, 595, 903
HpyF10VI GCNNNNNNNGC 4 cut(s) 112, 263, 432, 469
HpyF3I CTNAG 3 cut(s) 102, 141, 230
Hsp92II CATG 9 cut(s) 20, 84, 173, 196, 472, 641, 693, 742, 818
HspAI GCGC 2 cut(s) 295, 756
KpnI GGTACC 1 cut(s) 217
Ksp22I TGATCA 2 cut(s) 850, 1041
KspAI GTTAAC 1 cut(s) 246
Kzo9I GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
LguI GCTCTTC 1 cut(s) 192
Lsp1109I GCAGC 4 cut(s) 71, 309, 477, 1192
LweI GCATC 2 cut(s) 349, 465
MabI ACCWGGT 1 cut(s) 1155
MaeI CTAG 4 cut(s) 327, 353, 824, 1013
MaeIII GTNAC 4 cut(s) 447, 862, 1016, 1159
MalI GATC 6 cut(s) 564, 633, 697, 781, 852, 1043
MboI GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
MfeI CAATTG 2 cut(s) 315, 1142
MflI RGATCY 3 cut(s) 562, 631, 779
MhlI GDGCHC 1 cut(s) 204
MlsI TGGCCA 1 cut(s) 728
MluCI AATT 6 cut(s) 315, 335, 403, 671, 1142, 1285
MluNI TGGCCA 1 cut(s) 728
MlyI GAGTC 1 cut(s) 1071
MmeI TCCRAC 2 cut(s) 215, 807
Mox20I TGGCCA 1 cut(s) 728
Mph1103I ATGCAT 1 cut(s) 597
MscI TGGCCA 1 cut(s) 728
MseI TTAA 6 cut(s) 59, 110, 245, 260, 386, 804
MslI CAYNNNNRTG 4 cut(s) 79, 473, 791, 969
Msp20I TGGCCA 1 cut(s) 728
MspA1I CMGCKG 2 cut(s) 300, 490
MspCI CTTAAG 1 cut(s) 58
MspR9I CCNGG 5 cut(s) 44, 725, 881, 1157, 1183
MunI CAATTG 2 cut(s) 315, 1142
MvaI CCWGG 5 cut(s) 44, 725, 881, 1157, 1183
MvnI CGCG 1 cut(s) 756
MwoI GCNNNNNNNGC 4 cut(s) 112, 263, 432, 469
NcoI CCATGG 3 cut(s) 169, 192, 689
NdeII GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
NlaIII CATG 9 cut(s) 20, 84, 173, 196, 472, 641, 693, 742, 818
NlaIV GGNNCC 6 cut(s) 160, 215, 239, 392, 781, 1139
NmuCI GTSAC 2 cut(s) 1016, 1159
NsbI TGCGCA 1 cut(s) 296
NsiI ATGCAT 1 cut(s) 597
NspI RCATGY 1 cut(s) 472
NspV TTCGAA 1 cut(s) 519
PagI TCATGA 2 cut(s) 16, 637
PasI CCCWGGG 1 cut(s) 1182
PciSI GCTCTTC 1 cut(s) 192
PcsI WCGNNNNNNNCGW 1 cut(s) 1062
PfeI GAWTC 1 cut(s) 345
PkrI GCNGC 5 cut(s) 86, 299, 492, 1137, 1207
PleI GAGTC 1 cut(s) 1070
PpsI GAGTC 1 cut(s) 1070
Psp124BI GAGCTC 1 cut(s) 204
Psp6I CCWGG 5 cut(s) 42, 723, 879, 1155, 1181
PspGI CCWGG 5 cut(s) 42, 723, 879, 1155, 1181
PspN4I GGNNCC 6 cut(s) 160, 215, 239, 392, 781, 1139
PspPI GGNCC 2 cut(s) 158, 237
PsrI GAACNNNNNNTAC 2 cut(s) 1106, 1138
PsuI RGATCY 3 cut(s) 562, 631, 779
PvuII CAGCTG 2 cut(s) 300, 490
RsaI GTAC 4 cut(s) 215, 648, 920, 1121
RsaNI GTAC 4 cut(s) 214, 647, 919, 1120
RseI CAYNNNNRTG 4 cut(s) 79, 473, 791, 969
SacI GAGCTC 1 cut(s) 204
SapI GCTCTTC 1 cut(s) 192
SaqAI TTAA 6 cut(s) 59, 110, 245, 260, 386, 804
SatI GCNGC 5 cut(s) 85, 298, 491, 1136, 1206
Sau3AI GATC 6 cut(s) 562, 631, 695, 779, 850, 1041
Sau96I GGNCC 2 cut(s) 158, 237
ScaI AGTACT 1 cut(s) 1121
SchI GAGTC 1 cut(s) 1071
ScrFI CCNGG 5 cut(s) 44, 725, 881, 1157, 1183
SduI GDGCHC 1 cut(s) 204
SexAI ACCWGGT 1 cut(s) 1155
SfaNI GCATC 2 cut(s) 349, 465
SfcI CTRYAG 1 cut(s) 153
SfuI TTCGAA 1 cut(s) 519
SinI GGWCC 1 cut(s) 237
SmiMI CAYNNNNRTG 4 cut(s) 79, 473, 791, 969
SmlI CTYRAG 1 cut(s) 58
SmoI CTYRAG 1 cut(s) 58
SpeI ACTAGT 1 cut(s) 326
Sse9I AATT 6 cut(s) 315, 335, 403, 671, 1142, 1285
SsiI CCGC 4 cut(s) 424, 472, 754, 1135
SspMI CTAG 4 cut(s) 327, 353, 824, 1013
SstI GAGCTC 1 cut(s) 204
StyD4I CCNGG 5 cut(s) 42, 723, 879, 1155, 1181
StyI CCWWGG 3 cut(s) 169, 192, 689
TaaI ACNGT 2 cut(s) 250, 950
TaqI TCGA 4 cut(s) 409, 519, 706, 1056
TasI AATT 6 cut(s) 315, 335, 403, 671, 1142, 1285
TatI WGTACW 3 cut(s) 646, 918, 1119
TauI GCSGC 1 cut(s) 1138
TfiI GAWTC 1 cut(s) 345
Tru1I TTAA 6 cut(s) 59, 110, 245, 260, 386, 804
Tru9I TTAA 6 cut(s) 59, 110, 245, 260, 386, 804
TseFI GTSAC 2 cut(s) 1016, 1159
TseI GCWGC 4 cut(s) 84, 297, 490, 1205
Tsp45I GTSAC 2 cut(s) 1016, 1159
TspDTI ATGAA 5 cut(s) 69, 348, 358, 654, 1081
Vha464I CTTAAG 1 cut(s) 58
VpaK11BI GGWCC 1 cut(s) 237
XapI RAATTY 1 cut(s) 335
XceI RCATGY 1 cut(s) 472
XcmI CCANNNNNNNNNTGG 1 cut(s) 687
XspI CTAG 4 cut(s) 327, 353, 824, 1013
ZrmI AGTACT 1 cut(s) 1121
Zsp2I ATGCAT 1 cut(s) 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.