Prupe.1G478000_v2.0.a1

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000131
Physical Location & Seq
Reverse (-)
40029013 .. 40030917
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G478000.1

Sequence Viewer

Length: 1380 bp
ATGGAAGGAATCAATCAAGCTGCTGCAGTTGATACAGAGAACCCATACATTCCATTAGAAACTTCCATGAGACAGGAATTGGGTAGGTTATCTCCTATATCCTCTTCATGTTGTATTTACAGAGTTCCAGAGCGATTCAGACGTGTAAATGAAAACGCATACACACCTCAGGTAGTCTCTATAGGTCCACTCCACCATGGCAAGAAAGGGTTAGAAGCCATGGAAGAGCATAAAAAGAGGTACCTACAGGAATTTCTATGTCGGACCAAAGTAAGCTTGGAGGATTGCATAAAGAAAATTAGAGACCGAGAAGCAAGATTAAGAAGTTGTTATGCAGAAACCAATGGATTTAGCAGTGATGAATTTGTAAGAATCATTCTAGTAGATGCCGCATTCATCGTAGAGCTCTTGTTGAAACACAATGGCAGGACACCGATAAAAGAAAATGACGCCATATTTAAGAAACCAAAGATTATTCTGGATCTAGAGACTGACATGCAATTGCTTGAGAATCAACTACCAATCTTCATTCTCGAGGATCTTTTTTACCTACAACAAGGTACACTCCCTTCTGATTCTGACGACAGGCTTTCAACATTTGTAACTGATCTTTCTCTCAAATTCTTCACTTCGAGAATGACTCTGATGAGAGATGCAGATCAAGAGTCCATTTTAGACAGACTAAGTTCTACAAAAAAAGTAGAACATTTTTTGGATCTTATTTTAAGATCGTTATGCCAATCAGAAGTTGAATTAATACCATTAGGATGCCAATCAGAAGTTGAATTAATACCATTAGGTTATGTAACTACAACAACTCGCGTAAAAACTAGCGTAACACCTAGCCTAACACCTAGCGTGACAGAGCTATACCAGGCAGGAGTGGAGTTTAAGGTGGGATCAATGAAAAACTTATTTGACATACGATTCACTAATGGGATTTGCGAAATTCCAAAGATCCGAGTAGACGATGACACAGAGATCTCACTTAGAAATCTTCTTGCCTTTGAGCAGTGTCATTACATGCACAATCATATATGTGATTATATGACCATCATGGATGGTTTTGTGAACAACGCAATTGATGTGGATTTGCTTGTTGAGCGTGGAATTATTGAAAATATTCTAGGTGACAGGAAAGAGTTGTCTGCTCTATTTAACAACCTTGGCCTTGGGATTTGTTCTGACGAAAACTTCACATTTGCTAGTCTTTGTGAAGACCTGAACAGGTACTACAGTTCGAAAAGGCACAAAATGATGGCAAATTTGAGACACAATTATTTCAACACACCTTGGCGAACTCTCTCTGTCATTGCTGCTGTTGTTCTCCTCATACTCACTCTTATCCAAACTGTGTGTTCTATTATCTCTGTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

460

Amino Acids

52.4

Weight (kDa)

5.45

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 240
AccB1I GGYRCC 1 cut(s) 240
AccI GTMKAC 1 cut(s) 966
AccII CGCG 1 cut(s) 822
AciI CCGC 1 cut(s) 390
AclWI GGATC 5 cut(s) 489, 546, 723, 907, 952
AcsI RAATTY 5 cut(s) 251, 362, 620, 948, 1264
AcyI GRCGYC 1 cut(s) 450
AfaI GTAC 3 cut(s) 242, 562, 1232
AflIII ACRYGT 1 cut(s) 142
AgsI TTSAA 6 cut(s) 415, 594, 752, 785, 1118, 1285
AjiI CACGTC 1 cut(s) 143
AjnI CCWGG 1 cut(s) 873
AluBI AGCT 4 cut(s) 20, 276, 406, 868
AluI AGCT 4 cut(s) 20, 276, 406, 868
Alw21I GWGCWC 1 cut(s) 408
Alw26I GTCTC 5 cut(s) 64, 181, 297, 482, 1264
AlwI GGATC 5 cut(s) 489, 546, 723, 907, 952
Ama87I CYCGRG 1 cut(s) 533
AoxI GGCC 1 cut(s) 1168
ApeKI GCWGC 3 cut(s) 20, 23, 1316
ApoI RAATTY 5 cut(s) 251, 362, 620, 948, 1264
AseI ATTAAT 2 cut(s) 755, 788
Asp700I GAANNNNTTC 1 cut(s) 1122
Asp718I GGTACC 1 cut(s) 240
AspS9I GGNCC 2 cut(s) 185, 264
AsuHPI GGTGA 1 cut(s) 1142
AsuII TTCGAA 1 cut(s) 1241
AvaI CYCGRG 1 cut(s) 533
AvaII GGWCC 2 cut(s) 185, 264
AxyI CCTNAGG 1 cut(s) 168
BaeI ACNNNNGTAYC 2 cut(s) 1222, 1255
BanI GGYRCC 1 cut(s) 240
BanII GRGCYC 1 cut(s) 408
BarI GAAGNNNNNNTAC 2 cut(s) 553, 585
BbsI GAAGAC 1 cut(s) 1224
Bbv12I GWGCWC 1 cut(s) 408
BbvI GCAGC 3 cut(s) 7, 10, 1303
BccI CCATC 3 cut(s) 1055, 1061, 1252
BciT130I CCWGG 1 cut(s) 875
BcoDI GTCTC 5 cut(s) 64, 181, 297, 482, 1264
BfaI CTAG 7 cut(s) 380, 485, 831, 843, 855, 1127, 1206
BfmI CTRYAG 4 cut(s) 24, 180, 245, 1234
BglII AGATCT 1 cut(s) 981
BisI GCNGC 4 cut(s) 21, 24, 390, 1317
BlsI GCNGC 4 cut(s) 22, 25, 391, 1318
Bme1390I CCNGG 1 cut(s) 875
Bme18I GGWCC 2 cut(s) 185, 264
BmeT110I CYCGRG 1 cut(s) 533
BmgBI CACGTC 1 cut(s) 143
BmgT120I GGNCC 2 cut(s) 185, 264
BmiI GGNNCC 1 cut(s) 242
BmrFI CCNGG 1 cut(s) 875
BmsI GCATC 3 cut(s) 376, 643, 758
BpiI GAAGAC 1 cut(s) 1224
BplI GAGNNNNNCTC 2 cut(s) 625, 657
Bpu14I TTCGAA 1 cut(s) 1241
BpuEI CTTGAG 1 cut(s) 527
BsaBI GATNNNNATC 2 cut(s) 657, 772
BsaHI GRCGYC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 297
BsaJI CCNNGG 5 cut(s) 196, 219, 1165, 1171, 1292
Bse21I CCTNAGG 1 cut(s) 168
Bse3DI GCAATG 1 cut(s) 1311
Bse8I GATNNNNATC 2 cut(s) 657, 772
BseBI CCWGG 1 cut(s) 875
BseDI CCNNGG 5 cut(s) 196, 219, 1165, 1171, 1292
BseGI GGATG 2 cut(s) 773, 1066
BseJI GATNNNNATC 2 cut(s) 657, 772
BseMI GCAATG 1 cut(s) 1311
BseMII CTCAG 1 cut(s) 182
BseRI GAGGAG 1 cut(s) 1319
BseXI GCAGC 3 cut(s) 7, 10, 1303
Bsh1236I CGCG 1 cut(s) 822
BshFI GGCC 1 cut(s) 1170
BshNI GGYRCC 1 cut(s) 240
BsiHKAI GWGCWC 1 cut(s) 408
BsiHKCI CYCGRG 1 cut(s) 533
BsmAI GTCTC 5 cut(s) 64, 181, 297, 482, 1264
BsmI GAATGC 1 cut(s) 392
BsnI GGCC 1 cut(s) 1170
Bso31I GGTCTC 1 cut(s) 297
BsoBI CYCGRG 1 cut(s) 533
Bsp119I TTCGAA 1 cut(s) 1241
Bsp1286I GDGCHC 1 cut(s) 408
Bsp143I GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
Bsp19I CCATGG 2 cut(s) 196, 219
BspACI CCGC 1 cut(s) 390
BspANI GGCC 1 cut(s) 1170
BspCNI CTCAG 1 cut(s) 181
BspFNI CGCG 1 cut(s) 822
BspLI GGNNCC 1 cut(s) 242
BspMAI CTGCAG 1 cut(s) 28
BspPI GGATC 5 cut(s) 489, 546, 723, 907, 952
BspQI GCTCTTC 1 cut(s) 219
BspT104I TTCGAA 1 cut(s) 1241
BspT107I GGYRCC 1 cut(s) 240
BspTNI GGTCTC 1 cut(s) 297
BsrDI GCAATG 1 cut(s) 1311
BssECI CCNNGG 5 cut(s) 196, 219, 1165, 1171, 1292
BssMI GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
BssNI GRCGYC 1 cut(s) 450
BssT1I CCWWGG 5 cut(s) 196, 219, 1165, 1171, 1292
Bst2UI CCWGG 1 cut(s) 875
Bst4CI ACNGT 2 cut(s) 1238, 1354
Bst6I CTCTTC 2 cut(s) 109, 219
BstACI GRCGYC 1 cut(s) 450
BstBI TTCGAA 1 cut(s) 1241
BstDEI CTNAG 3 cut(s) 168, 683, 989
BstDSI CCRYGG 2 cut(s) 196, 219
BstF5I GGATG 2 cut(s) 773, 1066
BstFNI CGCG 1 cut(s) 822
BstKTI GATC 9 cut(s) 484, 541, 610, 661, 718, 731, 902, 960, 984
BstMAI GTCTC 5 cut(s) 64, 181, 297, 482, 1264
BstMBI GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
BstMWI GCNNNNNNNGC 1 cut(s) 1102
BstNI CCWGG 1 cut(s) 875
BstNSI RCATGY 2 cut(s) 499, 1027
BstSCI CCNGG 1 cut(s) 873
BstSFI CTRYAG 4 cut(s) 24, 180, 245, 1234
BstUI CGCG 1 cut(s) 822
BstV1I GCAGC 3 cut(s) 7, 10, 1303
BstV2I GAAGAC 1 cut(s) 1224
BstX2I RGATCY 5 cut(s) 481, 538, 715, 957, 981
BstYI RGATCY 5 cut(s) 481, 538, 715, 957, 981
Bsu36I CCTNAGG 1 cut(s) 168
BsuRI GGCC 1 cut(s) 1170
BtgI CCRYGG 2 cut(s) 196, 219
BtrI CACGTC 1 cut(s) 143
BtsCI GGATG 2 cut(s) 773, 1066
BtsI GCAGTG 2 cut(s) 361, 1019
BtsIMutI CAGTG 2 cut(s) 361, 1019
Cfr13I GGNCC 2 cut(s) 185, 264
CseI GACGC 1 cut(s) 458
Csp6I GTAC 3 cut(s) 241, 561, 1231
CspCI CAANNNNNGTGG 2 cut(s) 1068, 1103
CviAII CATG 7 cut(s) 67, 108, 197, 220, 496, 1024, 1057
CviJI RGCY 8 cut(s) 20, 218, 276, 406, 589, 846, 868, 1170
CviKI_1 RGCY 8 cut(s) 20, 218, 276, 406, 589, 846, 868, 1170
CviQI GTAC 3 cut(s) 241, 561, 1231
DdeI CTNAG 3 cut(s) 168, 683, 989
DpnI GATC 9 cut(s) 483, 540, 609, 660, 717, 730, 901, 959, 983
DpnII GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
Eam1104I CTCTTC 2 cut(s) 109, 219
EarI CTCTTC 2 cut(s) 109, 219
Ecl136II GAGCTC 1 cut(s) 406
Eco130I CCWWGG 5 cut(s) 196, 219, 1165, 1171, 1292
Eco24I GRGCYC 1 cut(s) 408
Eco31I GGTCTC 1 cut(s) 297
Eco47I GGWCC 2 cut(s) 185, 264
Eco53kI GAGCTC 1 cut(s) 406
Eco81I CCTNAGG 1 cut(s) 168
Eco88I CYCGRG 1 cut(s) 533
EcoICRI GAGCTC 1 cut(s) 406
EcoRII CCWGG 1 cut(s) 873
EcoT14I CCWWGG 5 cut(s) 196, 219, 1165, 1171, 1292
EcoT38I GRGCYC 1 cut(s) 408
ErhI CCWWGG 5 cut(s) 196, 219, 1165, 1171, 1292
FaeI CATG 7 cut(s) 70, 111, 200, 223, 499, 1027, 1060
FatI CATG 7 cut(s) 66, 107, 196, 219, 495, 1023, 1056
FblI GTMKAC 1 cut(s) 966
Fnu4HI GCNGC 4 cut(s) 21, 24, 390, 1317
FokI GGATG 2 cut(s) 780, 1073
FriOI GRGCYC 1 cut(s) 408
Fsp4HI GCNGC 4 cut(s) 21, 24, 390, 1317
FspBI CTAG 7 cut(s) 380, 485, 831, 843, 855, 1127, 1206
GluI GCNGC 4 cut(s) 21, 24, 390, 1317
HaeIII GGCC 1 cut(s) 1170
HgaI GACGC 1 cut(s) 458
Hin1I GRCGYC 1 cut(s) 450
Hin1II CATG 7 cut(s) 70, 111, 200, 223, 499, 1027, 1060
HindIII AAGCTT 1 cut(s) 274
HinfI GANTC 8 cut(s) 9, 135, 372, 511, 575, 640, 665, 927
HphI GGTGA 1 cut(s) 1142
Hpy166II GTNNAC 4 cut(s) 188, 563, 967, 1072
Hpy188I TCNGA 9 cut(s) 140, 264, 574, 580, 645, 745, 778, 962, 1186
Hpy188III TCNNGA 6 cut(s) 128, 479, 485, 533, 633, 662
Hpy8I GTNNAC 4 cut(s) 188, 563, 967, 1072
HpyAV CCTTC 1 cut(s) 579
HpyCH4III ACNGT 2 cut(s) 1238, 1354
HpyCH4IV ACGT 1 cut(s) 142
HpyCH4V TGCA 6 cut(s) 26, 288, 335, 499, 656, 1027
HpyF10VI GCNNNNNNNGC 1 cut(s) 1102
HpyF3I CTNAG 3 cut(s) 168, 683, 989
HpySE526I ACGT 1 cut(s) 142
Hsp92I GRCGYC 1 cut(s) 450
Hsp92II CATG 7 cut(s) 70, 111, 200, 223, 499, 1027, 1060
KpnI GGTACC 1 cut(s) 244
Kzo9I GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
LguI GCTCTTC 1 cut(s) 219
Lsp1109I GCAGC 3 cut(s) 7, 10, 1303
LweI GCATC 3 cut(s) 376, 643, 758
MaeI CTAG 7 cut(s) 380, 485, 831, 843, 855, 1127, 1206
MaeII ACGT 1 cut(s) 142
MaeIII GTNAC 5 cut(s) 601, 805, 835, 859, 1130
MalI GATC 9 cut(s) 483, 540, 609, 660, 717, 730, 901, 959, 983
MboI GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
MboII GAAGA 6 cut(s) 96, 236, 517, 616, 989, 1229
MfeI CAATTG 2 cut(s) 500, 1080
MflI RGATCY 5 cut(s) 481, 538, 715, 957, 981
MhlI GDGCHC 1 cut(s) 408
MlyI GAGTC 2 cut(s) 634, 674
MmeI TCCRAC 1 cut(s) 242
MnlI CCTC 6 cut(s) 112, 177, 231, 274, 529, 1340
MroXI GAANNNNTTC 1 cut(s) 1122
MseI TTAA 7 cut(s) 320, 459, 725, 755, 788, 891, 1158
MslI CAYNNNNRTG 2 cut(s) 766, 1038
MspR9I CCNGG 1 cut(s) 875
MunI CAATTG 2 cut(s) 500, 1080
Mva1269I GAATGC 1 cut(s) 392
MvaI CCWGG 1 cut(s) 875
MvnI CGCG 1 cut(s) 822
MwoI GCNNNNNNNGC 1 cut(s) 1102
NcoI CCATGG 2 cut(s) 196, 219
NdeII GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
NlaIII CATG 7 cut(s) 70, 111, 200, 223, 499, 1027, 1060
NlaIV GGNNCC 1 cut(s) 242
NmuCI GTSAC 2 cut(s) 859, 1130
NspI RCATGY 2 cut(s) 499, 1027
NspV TTCGAA 1 cut(s) 1241
PaeR7I CTCGAG 1 cut(s) 533
PciSI GCTCTTC 1 cut(s) 219
PctI GAATGC 1 cut(s) 392
PdmI GAANNNNTTC 1 cut(s) 1122
PfeI GAWTC 6 cut(s) 9, 135, 372, 511, 575, 927
PkrI GCNGC 4 cut(s) 22, 25, 391, 1318
PleI GAGTC 2 cut(s) 634, 673
PpsI GAGTC 2 cut(s) 634, 673
PshBI ATTAAT 2 cut(s) 755, 788
Psp124BI GAGCTC 1 cut(s) 408
Psp6I CCWGG 1 cut(s) 873
PspGI CCWGG 1 cut(s) 873
PspN4I GGNNCC 1 cut(s) 242
PspPI GGNCC 2 cut(s) 185, 264
PsrI GAACNNNNNNTAC 2 cut(s) 1217, 1249
PstI CTGCAG 1 cut(s) 28
PsuI RGATCY 5 cut(s) 481, 538, 715, 957, 981
RsaI GTAC 3 cut(s) 242, 562, 1232
RsaNI GTAC 3 cut(s) 241, 561, 1231
RseI CAYNNNNRTG 2 cut(s) 766, 1038
SacI GAGCTC 1 cut(s) 408
SapI GCTCTTC 1 cut(s) 219
SaqAI TTAA 7 cut(s) 320, 459, 725, 755, 788, 891, 1158
SatI GCNGC 4 cut(s) 21, 24, 390, 1317
Sau3AI GATC 9 cut(s) 481, 538, 607, 658, 715, 728, 899, 957, 981
Sau96I GGNCC 2 cut(s) 185, 264
SchI GAGTC 2 cut(s) 634, 674
ScrFI CCNGG 1 cut(s) 875
SduI GDGCHC 1 cut(s) 408
SfaNI GCATC 3 cut(s) 376, 643, 758
SfcI CTRYAG 4 cut(s) 24, 180, 245, 1234
Sfr274I CTCGAG 1 cut(s) 533
SfuI TTCGAA 1 cut(s) 1241
SinI GGWCC 2 cut(s) 185, 264
SlaI CTCGAG 1 cut(s) 533
SmiMI CAYNNNNRTG 2 cut(s) 766, 1038
SmlI CTYRAG 2 cut(s) 506, 533
SmoI CTYRAG 2 cut(s) 506, 533
SsiI CCGC 1 cut(s) 390
SspI AATATT 1 cut(s) 1123
SspMI CTAG 7 cut(s) 380, 485, 831, 843, 855, 1127, 1206
SstI GAGCTC 1 cut(s) 408
StyD4I CCNGG 1 cut(s) 873
StyI CCWWGG 5 cut(s) 196, 219, 1165, 1171, 1292
TaaI ACNGT 2 cut(s) 1238, 1354
TaiI ACGT 1 cut(s) 145
TaqI TCGA 3 cut(s) 534, 632, 1241
TaqII GACCGA 1 cut(s) 321
TauI GCSGC 1 cut(s) 392
TfiI GAWTC 6 cut(s) 9, 135, 372, 511, 575, 927
Tru1I TTAA 7 cut(s) 320, 459, 725, 755, 788, 891, 1158
Tru9I TTAA 7 cut(s) 320, 459, 725, 755, 788, 891, 1158
TscAI CASTG 2 cut(s) 361, 1019
TseFI GTSAC 2 cut(s) 859, 1130
TseI GCWGC 3 cut(s) 20, 23, 1316
Tsp45I GTSAC 2 cut(s) 859, 1130
TspDTI ATGAA 6 cut(s) 96, 165, 375, 385, 517, 920
TspRI CASTG 2 cut(s) 361, 1019
VpaK11BI GGWCC 2 cut(s) 185, 264
VspI ATTAAT 2 cut(s) 755, 788
XapI RAATTY 5 cut(s) 251, 362, 620, 948, 1264
XbaI TCTAGA 1 cut(s) 484
XceI RCATGY 2 cut(s) 499, 1027
XcmI CCANNNNNNNNNTGG 1 cut(s) 274
XhoI CTCGAG 1 cut(s) 533
XmiI GTMKAC 1 cut(s) 966
XmnI GAANNNNTTC 1 cut(s) 1122
XspI CTAG 7 cut(s) 380, 485, 831, 843, 855, 1127, 1206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.