Rroxscaffold_7G00216170

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000131
Physical Location & Seq
Reverse (-)
66856105 .. 66858010
1906 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00216170.1

Sequence Viewer

Length: 1479 bp
ATGAAGTACCCGTCCGGCAGCCAGCACAGGGACAATGCGGTGATGCTGGCGCTACCCATGGCTGCCACCGGACAGGAATGTTTGGAGGTGTTGTTGCTCTCCAATGGCGCTAGGGCTAAGAGAGAAAGAATACGGGCTGTGCGACTCATATGTGCTAAAACTAATTTGGATATGGGAGAGCCACAGCCAAAAAATCTGAAACAAAAGTTGGAAGAAGTGTCTCCACTTTCTCGTCAGTGTTGTATCTACAGGGTTCCAAAGAGACTACGTAACCAGAATGAGAAGGCATACACACCTCAAGTGGTCTCAATAGGCCCGCTTCACCATGGAAAAGACCTAGAAGCCATGGAAGATCACAAAATACGGTATGTGAAGGACTTTCTAGAACGGACCAAGGTAAGCATGGAGGAATGTTTCAATGCCTTGAAGAAGTGGGAGACAAAAATCCGTGCTTGTTATGCAGTAAAAATTGAATACGAAGAAACTGAGCTTGTGGAAATGGTTCTTGTAGATTCCATTTTCACCTTTGAGCTCCTGCTGAGGTCTGCTTACCCAGCACTGCAAGAGGAAAAGGTTGACCGTGTATTCGGAAAACCATGGATGCAAAGGGACATAACATATGACTTGTTATTGCTTGAAAATCAGATCCCATTCTTCATTCTTGAGTATCTTTATTCCTTAGCCCTTGCCCGTAATACTATTCCTCTGGAAGCTAATGGGGTGCTTTCTCTCTTGGAGCTTACCCACCGATTTTGGGAGAAGAGCGTAAACATAAGGCCATATGATCAAGAAATGAAGAAGAAACTCGAGCATAAACAGCAAATCGAGCATAAACAGCAAATCGAGCATAAACAGCAAATACAACATTTTGTTGATTTTGTCCTCACATGTCATCGACCTTTACCTCATGAGCTTCCCAATGAGAAGAAACTCACGACTTTAACCATACCAAATGCAACAGAATTATACCAGTCCGGAGTCAAGTTTGTGAGTAGTGTCGATGCCAAAAACATATTTGACATAAAATTTGAGAATGGGGTCCTGAAAATTCCACACTTGAGAATCCGCGGGTCAACAGAAATTTTCTTTCGGAATCTCATTGCCTACGAGCAGTGTGAGTTGCAAGATCACTACTTCCATGATTATGTGTTCATCATTGACGGCCTGGTTGACAGTTCTAAGGATGTGGACTTGCTTGTTGAGGCTGGAATCCTTGACTCTAAACTACCGGATAGTGAAGCAACAAGAAGTTTTATCAGTTCCCTTGACTCAGGGCCTATTCTGTTCAGTAAAAAATCATATGTTACTGATCTCTGTGACGCTCTGAATGCATACTATAGAGTCCCCCAGCACAAGTGGAAGGCAAGCTTGAAACAGGACTACTTTAGTACTCCATGGGCTGGACTGTCTATTGTTGTAGCAGCTATTCTCGTTGTGCTCACTTTTATTCAAACTGTGTGCTCTGTAATGTCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

492

Amino Acids

56.89

Weight (kDa)

6.95

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 82 - 480 3.3e-109 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1400
AccII CGCG 1 cut(s) 1068
AccIII TCCGGA 1 cut(s) 974
AciI CCGC 4 cut(s) 38, 317, 1066, 1068
AclWI GGATC 1 cut(s) 640
AcsI RAATTY 3 cut(s) 1025, 1047, 1080
AfaI GTAC 2 cut(s) 8, 1390
AfiI CCNNNNNNNGG 3 cut(s) 28, 754, 1400
AflIII ACRYGT 1 cut(s) 887
AgsI TTSAA 6 cut(s) 418, 427, 473, 638, 1372, 1451
AjnI CCWGG 1 cut(s) 1164
AjuI GAANNNNNNNTTGG 2 cut(s) 191, 223
AluBI AGCT 7 cut(s) 490, 532, 713, 739, 913, 1368, 1424
AluI AGCT 7 cut(s) 490, 532, 713, 739, 913, 1368, 1424
Alw21I GWGCWC 3 cut(s) 534, 1440, 1463
Alw26I GTCTC 4 cut(s) 225, 256, 310, 431
AlwI GGATC 1 cut(s) 640
Ama87I CYCGRG 1 cut(s) 806
Aor13HI TCCGGA 1 cut(s) 974
AoxI GGCC 4 cut(s) 313, 776, 1162, 1274
ApeKI GCWGC 3 cut(s) 18, 62, 1421
ApoI RAATTY 3 cut(s) 1025, 1047, 1080
ArsI GACNNNNNNTTYG 4 cut(s) 569, 601, 1010, 1042
Asp700I GAANNNNTTC 1 cut(s) 501
AspLEI GCGC 2 cut(s) 52, 110
AspS9I GGNCC 4 cut(s) 314, 390, 1039, 1274
AsuHPI GGTGA 3 cut(s) 52, 314, 514
AvaI CYCGRG 1 cut(s) 806
AvaII GGWCC 2 cut(s) 390, 1039
BanII GRGCYC 1 cut(s) 534
Bbv12I GWGCWC 3 cut(s) 534, 1440, 1463
BbvCI CCTCAGC 1 cut(s) 539
BbvI GCAGC 3 cut(s) 30, 49, 1433
BceAI ACGGC 1 cut(s) 1177
BciT130I CCWGG 1 cut(s) 1166
BclI TGATCA 1 cut(s) 784
BcoDI GTCTC 4 cut(s) 225, 256, 310, 431
BfaI CTAG 3 cut(s) 111, 338, 383
BfmI CTRYAG 2 cut(s) 247, 1336
BfoI RGCGCY 2 cut(s) 53, 111
BisI GCNGC 3 cut(s) 19, 63, 1422
BlsI GCNGC 3 cut(s) 20, 64, 1423
BmcAI AGTACT 1 cut(s) 1390
Bme1390I CCNGG 1 cut(s) 1166
Bme18I GGWCC 2 cut(s) 390, 1039
BmeT110I CYCGRG 1 cut(s) 806
BmgT120I GGNCC 4 cut(s) 314, 390, 1039, 1274
BmiI GGNNCC 2 cut(s) 255, 1040
BmrFI CCNGG 1 cut(s) 1166
BmsI GCATC 3 cut(s) 33, 591, 991
Bpu10I CCTNAGC 2 cut(s) 539, 679
BpuEI CTTGAG 3 cut(s) 282, 683, 1078
BsaAI YACGTR 1 cut(s) 269
BsaI GGTCTC 1 cut(s) 310
BsaJI CCNNGG 7 cut(s) 57, 325, 345, 393, 596, 1066, 1394
BsaWI WCCGGW 3 cut(s) 68, 974, 1228
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 3 cut(s) 28, 754, 1400
Bse1I ACTGG 1 cut(s) 970
Bse3DI GCAATG 1 cut(s) 1098
BseAI TCCGGA 1 cut(s) 974
BseBI CCWGG 1 cut(s) 1166
BseDI CCNNGG 7 cut(s) 57, 325, 345, 393, 596, 1066, 1394
BseGI GGATG 2 cut(s) 606, 1189
BseLI CCNNNNNNNGG 3 cut(s) 28, 754, 1400
BseMI GCAATG 1 cut(s) 1098
BseMII CTCAG 3 cut(s) 477, 530, 1284
BseNI ACTGG 1 cut(s) 970
BseXI GCAGC 3 cut(s) 30, 49, 1433
BseYI CCCAGC 2 cut(s) 553, 1347
Bsh1236I CGCG 1 cut(s) 1068
BshFI GGCC 4 cut(s) 315, 778, 1164, 1276
BsiHKAI GWGCWC 3 cut(s) 534, 1440, 1463
BsiHKCI CYCGRG 1 cut(s) 806
BsiSI CCGG 4 cut(s) 15, 69, 975, 1229
BslFI GGGAC 3 cut(s) 44, 623, 1328
BslI CCNNNNNNNGG 3 cut(s) 28, 754, 1400
BsmAI GTCTC 4 cut(s) 225, 256, 310, 431
BsmFI GGGAC 3 cut(s) 44, 623, 1328
BsmI GAATGC 1 cut(s) 1333
BsnI GGCC 4 cut(s) 315, 778, 1164, 1276
Bso31I GGTCTC 1 cut(s) 310
BsoBI CYCGRG 1 cut(s) 806
Bsp1286I GDGCHC 3 cut(s) 534, 1440, 1463
Bsp13I TCCGGA 1 cut(s) 974
Bsp143I GATC 5 cut(s) 352, 645, 784, 1126, 1309
Bsp19I CCATGG 5 cut(s) 57, 325, 345, 596, 1394
BspACI CCGC 4 cut(s) 38, 317, 1066, 1068
BspANI GGCC 4 cut(s) 315, 778, 1164, 1276
BspCNI CTCAG 3 cut(s) 478, 531, 1283
BspEI TCCGGA 1 cut(s) 974
BspFNI CGCG 1 cut(s) 1068
BspHI TCATGA 1 cut(s) 907
BspLI GGNNCC 2 cut(s) 255, 1040
BspPI GGATC 1 cut(s) 640
BspQI GCTCTTC 1 cut(s) 755
BspTNI GGTCTC 1 cut(s) 310
BsrDI GCAATG 1 cut(s) 1098
BsrI ACTGG 1 cut(s) 970
BssECI CCNNGG 7 cut(s) 57, 325, 345, 393, 596, 1066, 1394
BssMI GATC 5 cut(s) 352, 645, 784, 1126, 1309
BssT1I CCWWGG 6 cut(s) 57, 325, 345, 393, 596, 1394
Bst2UI CCWGG 1 cut(s) 1166
Bst4CI ACNGT 5 cut(s) 366, 581, 1175, 1407, 1456
Bst6I CTCTTC 1 cut(s) 755
BstBAI YACGTR 1 cut(s) 269
BstC8I GCNNGC 4 cut(s) 23, 48, 317, 1366
BstDEI CTNAG 6 cut(s) 117, 486, 539, 679, 1179, 1270
BstDSI CCRYGG 6 cut(s) 57, 325, 345, 596, 1066, 1394
BstF5I GGATG 2 cut(s) 606, 1189
BstFNI CGCG 1 cut(s) 1068
BstH2I RGCGCY 2 cut(s) 53, 111
BstHHI GCGC 2 cut(s) 52, 110
BstKTI GATC 5 cut(s) 355, 648, 787, 1129, 1312
BstMAI GTCTC 4 cut(s) 225, 256, 310, 431
BstMBI GATC 5 cut(s) 352, 645, 784, 1126, 1309
BstMWI GCNNNNNNNGC 8 cut(s) 458, 554, 817, 826, 835, 844, 853, 1328
BstNI CCWGG 1 cut(s) 1166
BstNSI RCATGY 1 cut(s) 891
BstSCI CCNGG 1 cut(s) 1164
BstSFI CTRYAG 2 cut(s) 247, 1336
BstSNI TACGTA 1 cut(s) 269
BstUI CGCG 1 cut(s) 1068
BstV1I GCAGC 3 cut(s) 30, 49, 1433
BstX2I RGATCY 1 cut(s) 645
BstYI RGATCY 1 cut(s) 645
BsuRI GGCC 4 cut(s) 315, 778, 1164, 1276
BtgI CCRYGG 6 cut(s) 57, 325, 345, 596, 1066, 1394
BtsCI GGATG 2 cut(s) 606, 1189
BtsI GCAGTG 2 cut(s) 557, 1118
BtsIMutI CAGTG 3 cut(s) 242, 557, 1118
Cac8I GCNNGC 4 cut(s) 23, 48, 317, 1366
CciI TCATGA 1 cut(s) 907
CfoI GCGC 2 cut(s) 52, 110
Cfr13I GGNCC 4 cut(s) 314, 390, 1039, 1274
Cfr42I CCGCGG 1 cut(s) 1069
CseI GACGC 1 cut(s) 1328
Csp6I GTAC 2 cut(s) 7, 1389
CspCI CAANNNNNGTGG 2 cut(s) 734, 769
CviAII CATG 9 cut(s) 58, 326, 346, 403, 597, 888, 908, 1139, 1395
CviQI GTAC 2 cut(s) 7, 1389
DdeI CTNAG 6 cut(s) 117, 486, 539, 679, 1179, 1270
DpnI GATC 5 cut(s) 354, 647, 786, 1128, 1311
DpnII GATC 5 cut(s) 352, 645, 784, 1126, 1309
Eam1104I CTCTTC 1 cut(s) 755
EarI CTCTTC 1 cut(s) 755
Ecl136II GAGCTC 1 cut(s) 532
Eco105I TACGTA 1 cut(s) 269
Eco130I CCWWGG 6 cut(s) 57, 325, 345, 393, 596, 1394
Eco24I GRGCYC 1 cut(s) 534
Eco31I GGTCTC 1 cut(s) 310
Eco47I GGWCC 2 cut(s) 390, 1039
Eco53kI GAGCTC 1 cut(s) 532
Eco88I CYCGRG 1 cut(s) 806
EcoICRI GAGCTC 1 cut(s) 532
EcoO109I RGGNCCY 2 cut(s) 1039, 1274
EcoRII CCWGG 1 cut(s) 1164
EcoT14I CCWWGG 6 cut(s) 57, 325, 345, 393, 596, 1394
EcoT22I ATGCAT 1 cut(s) 1333
EcoT38I GRGCYC 1 cut(s) 534
ErhI CCWWGG 6 cut(s) 57, 325, 345, 393, 596, 1394
FaeI CATG 9 cut(s) 61, 329, 349, 406, 600, 891, 911, 1142, 1398
FalI AAGNNNNNCTT 2 cut(s) 1352, 1384
FaqI GGGAC 3 cut(s) 44, 623, 1328
FatI CATG 9 cut(s) 57, 325, 345, 402, 596, 887, 907, 1138, 1394
FauI CCCGC 2 cut(s) 324, 1061
FauNDI CATATG 4 cut(s) 149, 619, 781, 1300
FbaI TGATCA 1 cut(s) 784
Fnu4HI GCNGC 3 cut(s) 19, 63, 1422
FokI GGATG 2 cut(s) 613, 1196
FriOI GRGCYC 1 cut(s) 534
Fsp4HI GCNGC 3 cut(s) 19, 63, 1422
FspBI CTAG 3 cut(s) 111, 338, 383
GlaI GCGC 2 cut(s) 51, 109
GluI GCNGC 3 cut(s) 19, 63, 1422
GsaI CCCAGC 2 cut(s) 557, 1351
HaeII RGCGCY 2 cut(s) 53, 111
HaeIII GGCC 4 cut(s) 315, 778, 1164, 1276
HapII CCGG 4 cut(s) 15, 69, 975, 1229
HgaI GACGC 1 cut(s) 1328
HhaI GCGC 2 cut(s) 52, 110
Hin1II CATG 9 cut(s) 61, 329, 349, 406, 600, 891, 911, 1142, 1398
Hin6I GCGC 2 cut(s) 50, 108
HinP1I GCGC 2 cut(s) 50, 108
HincII GTYRAC 3 cut(s) 577, 1074, 1171
HindII GTYRAC 3 cut(s) 577, 1074, 1171
HindIII AAGCTT 1 cut(s) 1366
HinfI GANTC 9 cut(s) 144, 512, 978, 1062, 1093, 1209, 1217, 1268, 1341
HpaII CCGG 4 cut(s) 15, 69, 975, 1229
HphI GGTGA 3 cut(s) 52, 314, 514
Hpy166II GTNNAC 5 cut(s) 577, 769, 1074, 1171, 1189
Hpy188I TCNGA 5 cut(s) 198, 590, 645, 1092, 1326
Hpy188III TCNNGA 8 cut(s) 383, 662, 707, 788, 908, 934, 975, 1042
Hpy8I GTNNAC 5 cut(s) 577, 769, 1074, 1171, 1189
HpyAV CCTTC 3 cut(s) 277, 367, 1354
HpyCH4III ACNGT 5 cut(s) 366, 581, 1175, 1407, 1456
HpyCH4IV ACGT 1 cut(s) 268
HpyCH4V TGCA 6 cut(s) 461, 562, 604, 956, 1123, 1331
HpyF10VI GCNNNNNNNGC 8 cut(s) 458, 554, 817, 826, 835, 844, 853, 1328
HpyF3I CTNAG 6 cut(s) 117, 486, 539, 679, 1179, 1270
HpySE526I ACGT 1 cut(s) 268
Hsp92II CATG 9 cut(s) 61, 329, 349, 406, 600, 891, 911, 1142, 1398
HspAI GCGC 2 cut(s) 50, 108
Kpn2I TCCGGA 1 cut(s) 974
Ksp22I TGATCA 1 cut(s) 784
KspI CCGCGG 1 cut(s) 1069
Kzo9I GATC 5 cut(s) 352, 645, 784, 1126, 1309
LguI GCTCTTC 1 cut(s) 755
LmnI GCTCC 2 cut(s) 537, 736
Lsp1109I GCAGC 3 cut(s) 30, 49, 1433
LweI GCATC 3 cut(s) 33, 591, 991
MaeI CTAG 3 cut(s) 111, 338, 383
MaeII ACGT 1 cut(s) 268
MaeIII GTNAC 3 cut(s) 269, 1303, 1316
MalI GATC 5 cut(s) 354, 647, 786, 1128, 1311
MboI GATC 5 cut(s) 352, 645, 784, 1126, 1309
MboII GAAGA 9 cut(s) 224, 362, 439, 491, 646, 772, 808, 811, 937
MflI RGATCY 1 cut(s) 645
MhlI GDGCHC 3 cut(s) 534, 1440, 1463
MluCI AATT 6 cut(s) 163, 468, 962, 1025, 1047, 1080
MlyI GAGTC 5 cut(s) 138, 987, 1211, 1262, 1350
MmeI TCCRAC 1 cut(s) 189
MnlI CCTC 9 cut(s) 79, 306, 400, 534, 559, 714, 893, 915, 1195
Mph1103I ATGCAT 1 cut(s) 1333
MroI TCCGGA 1 cut(s) 974
MroXI GAANNNNTTC 1 cut(s) 501
MseI TTAA 1 cut(s) 941
MslI CAYNNNNRTG 1 cut(s) 1143
MspA1I CMGCKG 1 cut(s) 1068
MspI CCGG 4 cut(s) 15, 69, 975, 1229
MspR9I CCNGG 1 cut(s) 1166
Mva1269I GAATGC 1 cut(s) 1333
MvaI CCWGG 1 cut(s) 1166
MvnI CGCG 1 cut(s) 1068
MwoI GCNNNNNNNGC 8 cut(s) 458, 554, 817, 826, 835, 844, 853, 1328
NcoI CCATGG 5 cut(s) 57, 325, 345, 596, 1394
NdeI CATATG 4 cut(s) 149, 619, 781, 1300
NdeII GATC 5 cut(s) 352, 645, 784, 1126, 1309
NlaIII CATG 9 cut(s) 61, 329, 349, 406, 600, 891, 911, 1142, 1398
NlaIV GGNNCC 2 cut(s) 255, 1040
NmuCI GTSAC 1 cut(s) 1316
NsiI ATGCAT 1 cut(s) 1333
NspI RCATGY 1 cut(s) 891
PaeR7I CTCGAG 1 cut(s) 806
PagI TCATGA 1 cut(s) 907
PciI ACATGT 1 cut(s) 887
PciSI GCTCTTC 1 cut(s) 755
PcsI WCGNNNNNNNCGW 1 cut(s) 139
PctI GAATGC 1 cut(s) 1333
PdmI GAANNNNTTC 1 cut(s) 501
PfeI GAWTC 4 cut(s) 512, 1062, 1093, 1209
PflMI CCANNNNNTGG 1 cut(s) 1400
PkrI GCNGC 3 cut(s) 20, 64, 1423
PleI GAGTC 5 cut(s) 138, 986, 1211, 1262, 1349
PpsI GAGTC 5 cut(s) 138, 986, 1211, 1262, 1349
Ppu21I YACGTR 1 cut(s) 269
PpuMI RGGWCCY 1 cut(s) 1039
PscI ACATGT 1 cut(s) 887
Psp124BI GAGCTC 1 cut(s) 534
Psp5II RGGWCCY 1 cut(s) 1039
Psp6I CCWGG 1 cut(s) 1164
PspFI CCCAGC 2 cut(s) 553, 1347
PspGI CCWGG 1 cut(s) 1164
PspN4I GGNNCC 2 cut(s) 255, 1040
PspPI GGNCC 4 cut(s) 314, 390, 1039, 1274
PspPPI RGGWCCY 1 cut(s) 1039
PspXI VCTCGAGB 1 cut(s) 806
PsuI RGATCY 1 cut(s) 645
RsaI GTAC 2 cut(s) 8, 1390
RsaNI GTAC 2 cut(s) 7, 1389
RseI CAYNNNNRTG 1 cut(s) 1143
SacI GAGCTC 1 cut(s) 534
SacII CCGCGG 1 cut(s) 1069
SapI GCTCTTC 1 cut(s) 755
SaqAI TTAA 1 cut(s) 941
SatI GCNGC 3 cut(s) 19, 63, 1422
Sau3AI GATC 5 cut(s) 352, 645, 784, 1126, 1309
Sau96I GGNCC 4 cut(s) 314, 390, 1039, 1274
ScaI AGTACT 1 cut(s) 1390
SchI GAGTC 5 cut(s) 138, 987, 1211, 1262, 1350
ScrFI CCNGG 1 cut(s) 1166
SduI GDGCHC 3 cut(s) 534, 1440, 1463
SfaNI GCATC 3 cut(s) 33, 591, 991
SfcI CTRYAG 2 cut(s) 247, 1336
Sfr274I CTCGAG 1 cut(s) 806
Sfr303I CCGCGG 1 cut(s) 1069
SgrBI CCGCGG 1 cut(s) 1069
SinI GGWCC 2 cut(s) 390, 1039
SlaI CTCGAG 1 cut(s) 806
SmiMI CAYNNNNRTG 1 cut(s) 1143
SmlI CTYRAG 4 cut(s) 297, 662, 806, 1057
SmoI CTYRAG 4 cut(s) 297, 662, 806, 1057
SnaBI TACGTA 1 cut(s) 269
Sse9I AATT 6 cut(s) 163, 468, 962, 1025, 1047, 1080
SsiI CCGC 4 cut(s) 38, 317, 1066, 1068
SspMI CTAG 3 cut(s) 111, 338, 383
SstI GAGCTC 1 cut(s) 534
StyD4I CCNGG 1 cut(s) 1164
StyI CCWWGG 6 cut(s) 57, 325, 345, 393, 596, 1394
TaaI ACNGT 5 cut(s) 366, 581, 1175, 1407, 1456
TaiI ACGT 1 cut(s) 271
TaqI TCGA 5 cut(s) 807, 825, 843, 895, 999
TasI AATT 6 cut(s) 163, 468, 962, 1025, 1047, 1080
TatI WGTACW 1 cut(s) 1388
TfiI GAWTC 4 cut(s) 512, 1062, 1093, 1209
Tru1I TTAA 1 cut(s) 941
Tru9I TTAA 1 cut(s) 941
TscAI CASTG 3 cut(s) 242, 564, 1118
TseFI GTSAC 1 cut(s) 1316
TseI GCWGC 3 cut(s) 18, 62, 1421
Tsp45I GTSAC 1 cut(s) 1316
TspDTI ATGAA 4 cut(s) 17, 646, 809, 1141
TspGWI ACGGA 2 cut(s) 403, 437
TspRI CASTG 3 cut(s) 242, 564, 1118
Van91I CCANNNNNTGG 1 cut(s) 1400
VpaK11BI GGWCC 2 cut(s) 390, 1039
XapI RAATTY 3 cut(s) 1025, 1047, 1080
XbaI TCTAGA 1 cut(s) 382
XceI RCATGY 1 cut(s) 891
XcmI CCANNNNNNNNNTGG 1 cut(s) 400
XhoI CTCGAG 1 cut(s) 806
XmnI GAANNNNTTC 1 cut(s) 501
XspI CTAG 3 cut(s) 111, 338, 383
ZrmI AGTACT 1 cut(s) 1390
Zsp2I ATGCAT 1 cut(s) 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.