Rh6AG390700

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000131
Physical Location & Seq
Forward (+)
58877531 .. 58879519
1989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG390700.1

Sequence Viewer

Length: 1365 bp
ATGTGTGTTTGTCTTGCCAGGAAGGCGGGAACCATCACTGGTTCAATTAACGAAAGCAACAAATACAAAAGGAAAATGGATAGAGGCAATAATGATCACTTAGTGAGGTCGATGAGCCAGGTGTTGCATAGCTTAAGGTTTGAGCTATCATCGTCATGCTGTATTTACCGAGTTCCTAAGCGACTACGGCGTGCAAGTGAAAATGCTTACACACCTCAAGTGGTCTCTATAGGTCCACTTCACCATGGCAAGGAAGGCTTAAAACCCATGGAAGAGCTCAAAAATAGGTACCTAAAAGTTTTTCTACGTCGGACCAAGGTAACCTTAGAGGATTATGTAGCTCAAATAAAGGCAAAAGAAGTAGATCTGCGCTGCTGTTATGCAGAGACCATTGATTTAAATAGTGATGAATTTGTAAGAATCGTTCTAGTGGACGCCGCCTTCGTCATTGAAGTCTTATTGAGGTTCAGCTTCCGTGACTGTCAAGAAGCAAATGACCGCATATTTAGCAAACCATTTATGTTACAGGATGTCTGGCCTGACATGCGGATGCTTGAAAATCAGCTGCCGTTCTTTATTCTTGACCATCTTTTCGAACCACACAAGGCTACTCTCTCAAGGGGGCAGTCACTAATTGAACTTTCTCACCACTTCTTCAAAACTCTAATGCATATAGATGTATCAGATGAAACTCTGAAGTCAATAAAACCTCATGAAGTAGTACATTTTGTTGATTTTGTTAGAAAGTTATATCCACTACCACCATGGAAATCACAACATCGATGGAATCGCGAAATACCGGTCACCCCAACCATGACACAGCTATCCCGAGCAGGGATCAGGTTTAAGGACGGATCGAAAACAAATATGTTTGATGTGAAGTTCGAAAAAGGGTTTCTAGCAATGCCAAAACTCACAATAAGTGATCAAACAGAGGTTACAATAACAAATCTCATTGCCTTTGAACAAAGCCAATGCGAGGACCAGGAGAAGTACATAAATGATTATTTCTTCTTCTTAAACGGTCTTGTAAAAACCCCTCAGGATGTTAAATTGCTTGTTGATCGTGGAATTCTTGACAATAAGCTAGGTGACAACAAAAAAGGCTGTGCTCTGATTAAGAACCTCGTGGATGGAGTGGTGGACTACTCCAAGGACTACTTCTATTTCTTCACTCTTTGCGATGACCTGAACAAGTACTACAATATGGGTCGTCACCAATGGAAGGAATACTTGGTCACGCACTTTTTCAACTCTCCTTGGGCAACTAAAGAAATCATTGCTGCAGTTATTTTCCTCTATCTCACTCTCATACAGACTGTGTTCTCTATCATGTCTTACTGTCACGACCTCGGTAAGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

454

Amino Acids

53.1

Weight (kDa)

8.77

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 55 - 435 2.5e-109 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 288
AccB1I GGYRCC 1 cut(s) 288
AccII CGCG 1 cut(s) 792
AciI CCGC 4 cut(s) 26, 438, 499, 547
AclWI GGATC 2 cut(s) 845, 862
AcsI RAATTY 2 cut(s) 410, 1071
AcuI CTGAAG 1 cut(s) 716
AcyI GRCGYC 1 cut(s) 435
AdeI CACNNNGTG 1 cut(s) 103
AfaI GTAC 4 cut(s) 290, 723, 995, 1199
AfiI CCNNNNNNNGG 4 cut(s) 250, 834, 979, 1225
AflII CTTAAG 1 cut(s) 133
AgeI ACCGGT 1 cut(s) 799
AgsI TTSAA 7 cut(s) 45, 452, 557, 638, 658, 965, 1252
AjnI CCWGG 3 cut(s) 17, 117, 984
AjuI GAANNNNNNNTTGG 4 cut(s) 1145, 1177, 1217, 1249
AluBI AGCT 8 cut(s) 132, 145, 277, 341, 471, 565, 823, 1087
AluI AGCT 8 cut(s) 132, 145, 277, 341, 471, 565, 823, 1087
Alw21I GWGCWC 2 cut(s) 279, 1114
Alw26I GTCTC 2 cut(s) 229, 380
AlwI GGATC 2 cut(s) 845, 862
Ama87I CYCGRG 1 cut(s) 828
AoxI GGCC 1 cut(s) 536
ApeKI GCWGC 3 cut(s) 372, 565, 1283
ApoI RAATTY 2 cut(s) 410, 1071
ArsI GACNNNNNNTTYG 6 cut(s) 425, 457, 575, 607, 786, 818
AsiGI ACCGGT 1 cut(s) 799
Asp718I GGTACC 1 cut(s) 288
AspLEI GCGC 1 cut(s) 372
AspS9I GGNCC 3 cut(s) 233, 312, 982
AsuHPI GGTGA 5 cut(s) 233, 638, 796, 1103, 1208
AsuII TTCGAA 2 cut(s) 594, 885
AvaI CYCGRG 1 cut(s) 828
AvaII GGWCC 3 cut(s) 233, 312, 982
AxyI CCTNAGG 1 cut(s) 1041
BanI GGYRCC 1 cut(s) 288
BanII GRGCYC 1 cut(s) 279
BauI CACGAG 1 cut(s) 1127
Bbv12I GWGCWC 2 cut(s) 279, 1114
BbvI GCAGC 3 cut(s) 359, 552, 1270
BccI CCATC 4 cut(s) 41, 594, 777, 1127
BceAI ACGGC 2 cut(s) 203, 553
BciT130I CCWGG 3 cut(s) 19, 119, 986
BclI TGATCA 2 cut(s) 94, 925
BcoDI GTCTC 2 cut(s) 229, 380
BfaI CTAG 3 cut(s) 428, 899, 1088
BfmI CTRYAG 2 cut(s) 228, 1284
BfrI CTTAAG 1 cut(s) 133
BglI GCCNNNNNGGC 1 cut(s) 23
BglII AGATCT 1 cut(s) 364
BisI GCNGC 4 cut(s) 373, 438, 566, 1284
BlsI GCNGC 4 cut(s) 374, 439, 567, 1285
BmcAI AGTACT 1 cut(s) 1199
Bme1390I CCNGG 3 cut(s) 19, 119, 986
Bme18I GGWCC 3 cut(s) 233, 312, 982
BmeT110I CYCGRG 1 cut(s) 828
BmgT120I GGNCC 3 cut(s) 233, 312, 982
BmiI GGNNCC 2 cut(s) 31, 290
BmrFI CCNGG 3 cut(s) 19, 119, 986
BmsI GCATC 1 cut(s) 540
Bpu10I CCTNAGC 1 cut(s) 177
Bpu14I TTCGAA 2 cut(s) 594, 885
BpuEI CTTGAG 2 cut(s) 201, 601
Bsa29I ATCGAT 1 cut(s) 781
BsaHI GRCGYC 1 cut(s) 435
BsaI GGTCTC 2 cut(s) 229, 380
BsaJI CCNNGG 7 cut(s) 244, 267, 315, 764, 1152, 1259, 1351
BsaWI WCCGGW 1 cut(s) 799
Bsc4I CCNNNNNNNGG 4 cut(s) 250, 834, 979, 1225
Bse118I RCCGGY 1 cut(s) 799
Bse1I ACTGG 1 cut(s) 43
Bse21I CCTNAGG 1 cut(s) 1041
Bse3DI GCAATG 3 cut(s) 909, 954, 1278
BseBI CCWGG 3 cut(s) 19, 119, 986
BseCI ATCGAT 1 cut(s) 781
BseDI CCNNGG 7 cut(s) 244, 267, 315, 764, 1152, 1259, 1351
BseGI GGATG 4 cut(s) 535, 555, 1051, 1138
BseLI CCNNNNNNNGG 4 cut(s) 250, 834, 979, 1225
BseMI GCAATG 3 cut(s) 909, 954, 1278
BseMII CTCAG 1 cut(s) 1055
BseNI ACTGG 1 cut(s) 43
BseXI GCAGC 3 cut(s) 359, 552, 1270
Bsh1236I CGCG 1 cut(s) 792
BshFI GGCC 1 cut(s) 538
BshNI GGYRCC 1 cut(s) 288
BshTI ACCGGT 1 cut(s) 799
BshVI ATCGAT 1 cut(s) 781
BsiHKAI GWGCWC 2 cut(s) 279, 1114
BsiHKCI CYCGRG 1 cut(s) 828
BsiSI CCGG 1 cut(s) 800
BslI CCNNNNNNNGG 4 cut(s) 250, 834, 979, 1225
BsmAI GTCTC 2 cut(s) 229, 380
BsnI GGCC 1 cut(s) 538
Bso31I GGTCTC 2 cut(s) 229, 380
BsoBI CYCGRG 1 cut(s) 828
Bsp119I TTCGAA 2 cut(s) 594, 885
Bsp1286I GDGCHC 2 cut(s) 279, 1114
Bsp143I GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
Bsp19I CCATGG 3 cut(s) 244, 267, 764
Bsp68I TCGCGA 1 cut(s) 792
BspACI CCGC 4 cut(s) 26, 438, 499, 547
BspANI GGCC 1 cut(s) 538
BspCNI CTCAG 1 cut(s) 1054
BspDI ATCGAT 1 cut(s) 781
BspFNI CGCG 1 cut(s) 792
BspHI TCATGA 1 cut(s) 712
BspLI GGNNCC 2 cut(s) 31, 290
BspMAI CTGCAG 1 cut(s) 1288
BspPI GGATC 2 cut(s) 845, 862
BspQI GCTCTTC 1 cut(s) 267
BspT104I TTCGAA 2 cut(s) 594, 885
BspT107I GGYRCC 1 cut(s) 288
BspTI CTTAAG 1 cut(s) 133
BspTNI GGTCTC 2 cut(s) 229, 380
BsrDI GCAATG 3 cut(s) 909, 954, 1278
BsrFI RCCGGY 1 cut(s) 799
BsrI ACTGG 1 cut(s) 43
BssAI RCCGGY 1 cut(s) 799
BssECI CCNNGG 7 cut(s) 244, 267, 315, 764, 1152, 1259, 1351
BssMI GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
BssNI GRCGYC 1 cut(s) 435
BssSI CACGAG 1 cut(s) 1127
BssT1I CCWWGG 6 cut(s) 244, 267, 315, 764, 1152, 1259
Bst2BI CACGAG 1 cut(s) 1127
Bst2UI CCWGG 3 cut(s) 19, 119, 986
Bst4CI ACNGT 4 cut(s) 482, 1025, 1321, 1343
Bst6I CTCTTC 1 cut(s) 267
BstACI GRCGYC 1 cut(s) 435
BstAFI CTTAAG 1 cut(s) 133
BstBI TTCGAA 2 cut(s) 594, 885
BstC8I GCNNGC 1 cut(s) 192
BstDEI CTNAG 4 cut(s) 100, 177, 325, 1041
BstDSI CCRYGG 3 cut(s) 244, 267, 764
BstEII GGTNACC 2 cut(s) 319, 802
BstF5I GGATG 4 cut(s) 535, 555, 1051, 1138
BstFNI CGCG 1 cut(s) 792
BstHHI GCGC 1 cut(s) 372
BstKTI GATC 6 cut(s) 97, 367, 840, 857, 928, 1066
BstMAI GTCTC 2 cut(s) 229, 380
BstMBI GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
BstMWI GCNNNNNNNGC 5 cut(s) 23, 187, 255, 507, 544
BstNI CCWGG 3 cut(s) 19, 119, 986
BstNSI RCATGY 1 cut(s) 547
BstPI GGTNACC 2 cut(s) 319, 802
BstSCI CCNGG 3 cut(s) 17, 117, 984
BstSFI CTRYAG 2 cut(s) 228, 1284
BstUI CGCG 1 cut(s) 792
BstV1I GCAGC 3 cut(s) 359, 552, 1270
BstX2I RGATCY 1 cut(s) 364
BstYI RGATCY 1 cut(s) 364
Bsu15I ATCGAT 1 cut(s) 781
Bsu36I CCTNAGG 1 cut(s) 1041
BsuRI GGCC 1 cut(s) 538
BsuTUI ATCGAT 1 cut(s) 781
BtgI CCRYGG 3 cut(s) 244, 267, 764
BtgZI GCGATG 1 cut(s) 1197
BtsCI GGATG 4 cut(s) 535, 555, 1051, 1138
BtsIMutI CAGTG 1 cut(s) 36
BtuMI TCGCGA 1 cut(s) 792
Cac8I GCNNGC 1 cut(s) 192
CciI TCATGA 1 cut(s) 712
CfoI GCGC 1 cut(s) 372
Cfr10I RCCGGY 1 cut(s) 799
Cfr13I GGNCC 3 cut(s) 233, 312, 982
ClaI ATCGAT 1 cut(s) 781
CseI GACGC 1 cut(s) 443
Csp6I GTAC 4 cut(s) 289, 722, 994, 1198
CspAI ACCGGT 1 cut(s) 799
CviAII CATG 8 cut(s) 156, 245, 268, 544, 713, 765, 814, 1333
CviQI GTAC 4 cut(s) 289, 722, 994, 1198
DdeI CTNAG 4 cut(s) 100, 177, 325, 1041
DpnI GATC 6 cut(s) 96, 366, 839, 856, 927, 1065
DpnII GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
DraI TTTAAA 1 cut(s) 399
DraIII CACNNNGTG 1 cut(s) 103
Eam1104I CTCTTC 1 cut(s) 267
EarI CTCTTC 1 cut(s) 267
Ecl136II GAGCTC 1 cut(s) 277
Eco130I CCWWGG 6 cut(s) 244, 267, 315, 764, 1152, 1259
Eco24I GRGCYC 1 cut(s) 279
Eco31I GGTCTC 2 cut(s) 229, 380
Eco47I GGWCC 3 cut(s) 233, 312, 982
Eco53kI GAGCTC 1 cut(s) 277
Eco57I CTGAAG 1 cut(s) 716
Eco81I CCTNAGG 1 cut(s) 1041
Eco88I CYCGRG 1 cut(s) 828
Eco91I GGTNACC 2 cut(s) 319, 802
EcoICRI GAGCTC 1 cut(s) 277
EcoO65I GGTNACC 2 cut(s) 319, 802
EcoRI GAATTC 1 cut(s) 1071
EcoRII CCWGG 3 cut(s) 17, 117, 984
EcoT14I CCWWGG 6 cut(s) 244, 267, 315, 764, 1152, 1259
EcoT22I ATGCAT 1 cut(s) 672
EcoT38I GRGCYC 1 cut(s) 279
ErhI CCWWGG 6 cut(s) 244, 267, 315, 764, 1152, 1259
FaeI CATG 8 cut(s) 159, 248, 271, 547, 716, 768, 817, 1336
FalI AAGNNNNNCTT 8 cut(s) 242, 274, 308, 340, 1145, 1177, 1217, 1249
FatI CATG 8 cut(s) 155, 244, 267, 543, 712, 764, 813, 1332
FauI CCCGC 1 cut(s) 19
FbaI TGATCA 2 cut(s) 94, 925
Fnu4HI GCNGC 4 cut(s) 373, 438, 566, 1284
FokI GGATG 4 cut(s) 542, 562, 1058, 1145
FriOI GRGCYC 1 cut(s) 279
Fsp4HI GCNGC 4 cut(s) 373, 438, 566, 1284
FspBI CTAG 3 cut(s) 428, 899, 1088
GlaI GCGC 1 cut(s) 371
GluI GCNGC 4 cut(s) 373, 438, 566, 1284
HaeIII GGCC 1 cut(s) 538
HapII CCGG 1 cut(s) 800
HgaI GACGC 1 cut(s) 443
HhaI GCGC 1 cut(s) 372
Hin1I GRCGYC 1 cut(s) 435
Hin1II CATG 8 cut(s) 159, 248, 271, 547, 716, 768, 817, 1336
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HinfI GANTC 2 cut(s) 420, 787
HpaII CCGG 1 cut(s) 800
HphI GGTGA 5 cut(s) 233, 638, 796, 1103, 1208
Hpy166II GTNNAC 3 cut(s) 236, 433, 1144
Hpy188I TCNGA 4 cut(s) 312, 685, 696, 1116
Hpy188III TCNNGA 8 cut(s) 485, 581, 713, 791, 828, 1043, 1076, 1346
Hpy8I GTNNAC 3 cut(s) 236, 433, 1144
Hpy99I CGWCG 1 cut(s) 312
HpyAV CCTTC 4 cut(s) 16, 248, 451, 1219
HpyCH4III ACNGT 4 cut(s) 482, 1025, 1321, 1343
HpyCH4IV ACGT 1 cut(s) 307
HpyCH4V TGCA 5 cut(s) 127, 194, 383, 670, 1286
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 187, 255, 507, 544
HpyF3I CTNAG 4 cut(s) 100, 177, 325, 1041
HpySE526I ACGT 1 cut(s) 307
Hsp92I GRCGYC 1 cut(s) 435
Hsp92II CATG 8 cut(s) 159, 248, 271, 547, 716, 768, 817, 1336
HspAI GCGC 1 cut(s) 370
KpnI GGTACC 1 cut(s) 292
Ksp22I TGATCA 2 cut(s) 94, 925
Kzo9I GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
LguI GCTCTTC 1 cut(s) 267
Lsp1109I GCAGC 3 cut(s) 359, 552, 1270
LweI GCATC 1 cut(s) 540
MaeI CTAG 3 cut(s) 428, 899, 1088
MaeII ACGT 1 cut(s) 307
MalI GATC 6 cut(s) 96, 366, 839, 856, 927, 1065
MboI GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
MboII GAAGA 5 cut(s) 284, 646, 1003, 1006, 1162
MflI RGATCY 1 cut(s) 364
MhlI GDGCHC 2 cut(s) 279, 1114
MluCI AATT 5 cut(s) 45, 410, 633, 1052, 1071
MmeI TCCRAC 1 cut(s) 290
Mph1103I ATGCAT 1 cut(s) 672
MseI TTAA 8 cut(s) 48, 134, 260, 398, 846, 1019, 1050, 1119
MslI CAYNNNNRTG 3 cut(s) 154, 548, 675
MspA1I CMGCKG 1 cut(s) 565
MspCI CTTAAG 1 cut(s) 133
MspI CCGG 1 cut(s) 800
MspR9I CCNGG 3 cut(s) 19, 119, 986
MvaI CCWGG 3 cut(s) 19, 119, 986
MvnI CGCG 1 cut(s) 792
MwoI GCNNNNNNNGC 5 cut(s) 23, 187, 255, 507, 544
NcoI CCATGG 3 cut(s) 244, 267, 764
NdeII GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
NlaIII CATG 8 cut(s) 159, 248, 271, 547, 716, 768, 817, 1336
NlaIV GGNNCC 2 cut(s) 31, 290
NmuCI GTSAC 7 cut(s) 476, 627, 802, 1091, 1214, 1237, 1343
NruI TCGCGA 1 cut(s) 792
NsiI ATGCAT 1 cut(s) 672
NspI RCATGY 1 cut(s) 547
NspV TTCGAA 2 cut(s) 594, 885
PagI TCATGA 1 cut(s) 712
PciSI GCTCTTC 1 cut(s) 267
PcsI WCGNNNNNNNCGW 1 cut(s) 441
PfeI GAWTC 2 cut(s) 420, 787
PinAI ACCGGT 1 cut(s) 799
PkrI GCNGC 4 cut(s) 374, 439, 567, 1285
Psp124BI GAGCTC 1 cut(s) 279
Psp6I CCWGG 3 cut(s) 17, 117, 984
PspEI GGTNACC 2 cut(s) 319, 802
PspGI CCWGG 3 cut(s) 17, 117, 984
PspN4I GGNNCC 2 cut(s) 31, 290
PspPI GGNCC 3 cut(s) 233, 312, 982
PsrI GAACNNNNNNTAC 4 cut(s) 408, 440, 1184, 1216
PstI CTGCAG 1 cut(s) 1288
PsuI RGATCY 1 cut(s) 364
PvuII CAGCTG 1 cut(s) 565
RruI TCGCGA 1 cut(s) 792
RsaI GTAC 4 cut(s) 290, 723, 995, 1199
RsaNI GTAC 4 cut(s) 289, 722, 994, 1198
RseI CAYNNNNRTG 3 cut(s) 154, 548, 675
SacI GAGCTC 1 cut(s) 279
SapI GCTCTTC 1 cut(s) 267
SaqAI TTAA 8 cut(s) 48, 134, 260, 398, 846, 1019, 1050, 1119
SatI GCNGC 4 cut(s) 373, 438, 566, 1284
Sau3AI GATC 6 cut(s) 94, 364, 837, 854, 925, 1063
Sau96I GGNCC 3 cut(s) 233, 312, 982
ScaI AGTACT 1 cut(s) 1199
ScrFI CCNGG 3 cut(s) 19, 119, 986
SduI GDGCHC 2 cut(s) 279, 1114
SfaNI GCATC 1 cut(s) 540
SfcI CTRYAG 2 cut(s) 228, 1284
SfuI TTCGAA 2 cut(s) 594, 885
SinI GGWCC 3 cut(s) 233, 312, 982
SmiI ATTTAAAT 1 cut(s) 399
SmiMI CAYNNNNRTG 3 cut(s) 154, 548, 675
SmlI CTYRAG 3 cut(s) 133, 216, 616
SmoI CTYRAG 3 cut(s) 133, 216, 616
Sse9I AATT 5 cut(s) 45, 410, 633, 1052, 1071
SsiI CCGC 4 cut(s) 26, 438, 499, 547
SspMI CTAG 3 cut(s) 428, 899, 1088
SstI GAGCTC 1 cut(s) 279
StyD4I CCNGG 3 cut(s) 17, 117, 984
StyI CCWWGG 6 cut(s) 244, 267, 315, 764, 1152, 1259
SwaI ATTTAAAT 1 cut(s) 399
TaaI ACNGT 4 cut(s) 482, 1025, 1321, 1343
TaiI ACGT 1 cut(s) 310
TaqI TCGA 5 cut(s) 110, 594, 781, 857, 885
TasI AATT 5 cut(s) 45, 410, 633, 1052, 1071
TatI WGTACW 3 cut(s) 721, 993, 1197
TauI GCSGC 1 cut(s) 440
TfiI GAWTC 2 cut(s) 420, 787
Tru1I TTAA 8 cut(s) 48, 134, 260, 398, 846, 1019, 1050, 1119
Tru9I TTAA 8 cut(s) 48, 134, 260, 398, 846, 1019, 1050, 1119
TscAI CASTG 1 cut(s) 43
TseFI GTSAC 7 cut(s) 476, 627, 802, 1091, 1214, 1237, 1343
TseI GCWGC 3 cut(s) 372, 565, 1283
Tsp45I GTSAC 7 cut(s) 476, 627, 802, 1091, 1214, 1237, 1343
TspDTI ATGAA 3 cut(s) 423, 702, 729
TspGWI ACGGA 2 cut(s) 464, 867
TspRI CASTG 1 cut(s) 43
Vha464I CTTAAG 1 cut(s) 133
VpaK11BI GGWCC 3 cut(s) 233, 312, 982
XapI RAATTY 2 cut(s) 410, 1071
XceI RCATGY 1 cut(s) 547
XcmI CCANNNNNNNNNTGG 1 cut(s) 762
XspI CTAG 3 cut(s) 428, 899, 1088
ZrmI AGTACT 1 cut(s) 1199
Zsp2I ATGCAT 1 cut(s) 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.