MD08G1146300.v1.1

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000131
Physical Location & Seq
Reverse (-)
14623020 .. 14626411
3392 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1146300.v1.1.491

Sequence Viewer

Length: 1317 bp
ATGGAAGGAAGCAACGAAGCTCCACATGACATCGAAAACCCATACATTCCGTTAGCAAAATCAATGAATCGGGAGTTGGATGTTTTGGCTCCCTTGTCGTCTTCGTGTTGTATCTACAGAGTTCCTGAACGACTGCGGCGTGTAAGTGAAAAGGCCTACACACCTCAAGTAGTCTCTATAGGTCCTCTTCACCATGGAAAGGAAGGCCTACAAGCCATGGAAGAGCACAAAAAGAGGTACCTACGAGATTTTATACGCAGAACCAGGGTCAGCTTGGAGCACTATATAAAGAAAATAAAGGACCAAGAGGGCAAGATACGCAGTTGTTACGCAGAAACTATCGAGTTTAGCAGTGACGACTTTGTAAGAATTGTTCTAGTGGATGCAGCATTCATTATTGAGGTCTTGTTGAGGCACCGTTTCCATGAATTGCAGGACGAGAATGATCGTATATTTAACAAACCATGGATGCTGCAGGACGTATGGCCTGACATACGGCTGCTTGAAAATCAGTTGCCATTCTTCGTTCTTGAGGATCTTTTTGACCCAGATAAAATCGATGTACCTTCTGATAGTAACTGTACTGAGAGGCTTTCGATAATCAAACTTTCTCACGTATTCTTCAAAGATCTTGAAGGAGCGGATGGAAATTTGGATAAAATGTGTGCTTATAAAGCAGAACATTTTGTCGATTTTTGTAGAAAATTATATCTACCGCTACCACTAGAACGGCAGGCTAAAGGGAAACTCAAAACTCTAAACACGCCAAGCATCACAGAGTTACACCGGGCAGGAGTCAAGTTTAGAGTGGGATCAGCCAAAAACTTACTCGACATACAATTCAATGATGGGATTCTAGAAATTCCAAAATTGACAATTAGTGATGAAACAGAACTTACAGTCAGAAACCTCCTTGCCTTTGAACAATGCCACTGTATGGAGAATTACATGAATGACTATGTTGTCATCATGGATCGTTTCGTGAACACTGCAAAGGATGTGGAGTTGCTTGTTAAGCACGGAATTGTTGAAAATAGGCTTGGTGACAGCAGTGGAGGTTCTACTCTGATTAACAACCTTGCCGATGGGGTCATAGTGGACTCGAACGACTTCTATTTTGCTACTCTTTGTGAAGACCTGAACAAGTACTGCAAAACTTCATGGCACAAATGGAAGGCAAATTTAAGACAAAATTATTGCAACACGCCTTGGGCAACTCTATCTATTGCTGCAGCTGTTTTGCTCCTCGTACTCACTCTCATACAGACAATGTGCTCTGTTGGCTCAGTTTGGCAATCTAAGAAGCCTCATAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

439

Amino Acids

50.44

Weight (kDa)

6.19

Isoelectric Point (pI)

37.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 38 - 418 2.7e-122 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 672
AasI GACNNNNNNGTC 1 cut(s) 962
Acc65I GGTACC 1 cut(s) 237
AccB1I GGYRCC 2 cut(s) 237, 414
AccB7I CCANNNNNTGG 1 cut(s) 937
AccBSI CCGCTC 1 cut(s) 641
AciI CCGC 3 cut(s) 136, 641, 716
AclWI GGATC 3 cut(s) 543, 820, 981
AcsI RAATTY 3 cut(s) 649, 861, 1180
AfaI GTAC 5 cut(s) 239, 564, 583, 1148, 1251
AfiI CCNNNNNNNGG 2 cut(s) 199, 937
AgsI TTSAA 6 cut(s) 506, 625, 635, 844, 923, 1031
AjnI CCWGG 1 cut(s) 263
AjuI GAANNNNNNNTTGG 4 cut(s) 59, 91, 1023, 1055
AluBI AGCT 3 cut(s) 20, 273, 1235
AluI AGCT 3 cut(s) 20, 273, 1235
Alw21I GWGCWC 3 cut(s) 228, 282, 1277
Alw26I GTCTC 1 cut(s) 178
AlwI GGATC 3 cut(s) 543, 820, 981
AoxI GGCC 3 cut(s) 153, 205, 485
ApeKI GCWGC 5 cut(s) 386, 472, 499, 1229, 1232
ApoI RAATTY 3 cut(s) 649, 861, 1180
ArsI GACNNNNNNTTYG 2 cut(s) 1100, 1132
Asp700I GAANNNNTTC 1 cut(s) 1109
Asp718I GGTACC 1 cut(s) 237
AspS9I GGNCC 2 cut(s) 182, 301
AsuC2I CCSGG 1 cut(s) 788
AsuHPI GGTGA 2 cut(s) 182, 1055
AvaII GGWCC 2 cut(s) 182, 301
BanI GGYRCC 2 cut(s) 237, 414
BbsI GAAGAC 2 cut(s) 93, 1140
Bbv12I GWGCWC 3 cut(s) 228, 282, 1277
BbvI GCAGC 5 cut(s) 398, 459, 486, 1216, 1244
BccI CCATC 3 cut(s) 638, 842, 1079
BceAI ACGGC 2 cut(s) 512, 746
BciT130I CCWGG 1 cut(s) 265
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 1 cut(s) 178
BfaI CTAG 3 cut(s) 377, 725, 857
BfmI CTRYAG 4 cut(s) 115, 177, 473, 1230
BglII AGATCT 1 cut(s) 628
BisI GCNGC 6 cut(s) 137, 387, 473, 500, 1230, 1233
BlsI GCNGC 6 cut(s) 138, 388, 474, 501, 1231, 1234
BmcAI AGTACT 1 cut(s) 1148
Bme1390I CCNGG 2 cut(s) 265, 788
Bme18I GGWCC 2 cut(s) 182, 301
BmgT120I GGNCC 2 cut(s) 182, 301
BmiI GGNNCC 3 cut(s) 90, 239, 416
BmrFI CCNGG 2 cut(s) 265, 788
BmsI GCATC 3 cut(s) 373, 459, 780
BpiI GAAGAC 2 cut(s) 93, 1140
BpuEI CTTGAG 2 cut(s) 150, 551
BpuMI CCSGG 1 cut(s) 788
Bsa29I ATCGAT 1 cut(s) 558
BsaAI YACGTR 1 cut(s) 616
BsaJI CCNNGG 5 cut(s) 193, 216, 264, 464, 1208
Bsc4I CCNNNNNNNGG 2 cut(s) 199, 937
BseBI CCWGG 1 cut(s) 265
BseCI ATCGAT 1 cut(s) 558
BseDI CCNNGG 5 cut(s) 193, 216, 264, 464, 1208
BseGI GGATG 5 cut(s) 85, 388, 474, 649, 1003
BseLI CCNNNNNNNGG 2 cut(s) 199, 937
BseMII CTCAG 2 cut(s) 576, 1299
BseRI GAGGAG 1 cut(s) 1235
BseXI GCAGC 5 cut(s) 398, 459, 486, 1216, 1244
BshFI GGCC 3 cut(s) 155, 207, 487
BshNI GGYRCC 2 cut(s) 237, 414
BshVI ATCGAT 1 cut(s) 558
BsiHKAI GWGCWC 3 cut(s) 228, 282, 1277
BsiSI CCGG 1 cut(s) 787
BslI CCNNNNNNNGG 2 cut(s) 199, 937
BsmAI GTCTC 1 cut(s) 178
BsmI GAATGC 1 cut(s) 389
BsnI GGCC 3 cut(s) 155, 207, 487
Bsp1286I GDGCHC 3 cut(s) 228, 282, 1277
Bsp143I GATC 5 cut(s) 445, 535, 628, 812, 973
Bsp19I CCATGG 3 cut(s) 193, 216, 464
BspACI CCGC 3 cut(s) 136, 641, 716
BspANI GGCC 3 cut(s) 155, 207, 487
BspCNI CTCAG 2 cut(s) 577, 1298
BspDI ATCGAT 1 cut(s) 558
BspLI GGNNCC 3 cut(s) 90, 239, 416
BspMAI CTGCAG 2 cut(s) 477, 1234
BspPI GGATC 3 cut(s) 543, 820, 981
BspQI GCTCTTC 1 cut(s) 216
BspT107I GGYRCC 2 cut(s) 237, 414
BsrBI CCGCTC 1 cut(s) 641
BssECI CCNNGG 5 cut(s) 193, 216, 264, 464, 1208
BssMI GATC 5 cut(s) 445, 535, 628, 812, 973
BssT1I CCWWGG 4 cut(s) 193, 216, 464, 1208
Bst2UI CCWGG 1 cut(s) 265
Bst4CI ACNGT 4 cut(s) 419, 581, 901, 935
Bst6I CTCTTC 2 cut(s) 192, 216
BstBAI YACGTR 1 cut(s) 616
BstC8I GCNNGC 1 cut(s) 735
BstDEI CTNAG 3 cut(s) 585, 1285, 1299
BstDSI CCRYGG 3 cut(s) 193, 216, 464
BstF5I GGATG 5 cut(s) 85, 388, 474, 649, 1003
BstKTI GATC 5 cut(s) 448, 538, 631, 815, 976
BstMAI GTCTC 1 cut(s) 178
BstMBI GATC 5 cut(s) 445, 535, 628, 812, 973
BstMWI GCNNNNNNNGC 4 cut(s) 318, 674, 1015, 1281
BstNI CCWGG 1 cut(s) 265
BstSCI CCNGG 2 cut(s) 263, 786
BstSFI CTRYAG 4 cut(s) 115, 177, 473, 1230
BstV1I GCAGC 5 cut(s) 398, 459, 486, 1216, 1244
BstV2I GAAGAC 2 cut(s) 93, 1140
BstX2I RGATCY 2 cut(s) 535, 628
BstYI RGATCY 2 cut(s) 535, 628
Bsu15I ATCGAT 1 cut(s) 558
BsuRI GGCC 3 cut(s) 155, 207, 487
BsuTUI ATCGAT 1 cut(s) 558
BtgI CCRYGG 3 cut(s) 193, 216, 464
BtsCI GGATG 5 cut(s) 85, 388, 474, 649, 1003
BtsI GCAGTG 3 cut(s) 358, 987, 1057
BtsIMutI CAGTG 4 cut(s) 358, 931, 987, 1057
Cac8I GCNNGC 1 cut(s) 735
Cfr13I GGNCC 2 cut(s) 182, 301
ClaI ATCGAT 1 cut(s) 558
Csp6I GTAC 5 cut(s) 238, 563, 582, 1147, 1250
CspCI CAANNNNNGTGG 2 cut(s) 981, 1016
CviAII CATG 8 cut(s) 26, 194, 217, 425, 465, 949, 970, 1161
CviQI GTAC 5 cut(s) 238, 563, 582, 1147, 1250
DdeI CTNAG 3 cut(s) 585, 1285, 1299
DpnI GATC 5 cut(s) 447, 537, 630, 814, 975
DpnII GATC 5 cut(s) 445, 535, 628, 812, 973
DrdI GACNNNNNNGTC 1 cut(s) 962
DseDI GACNNNNNNGTC 1 cut(s) 962
Eam1104I CTCTTC 2 cut(s) 192, 216
EarI CTCTTC 2 cut(s) 192, 216
Eco130I CCWWGG 4 cut(s) 193, 216, 464, 1208
Eco147I AGGCCT 2 cut(s) 155, 207
Eco47I GGWCC 2 cut(s) 182, 301
EcoO109I RGGNCCY 1 cut(s) 182
EcoRII CCWGG 1 cut(s) 263
EcoT14I CCWWGG 4 cut(s) 193, 216, 464, 1208
ErhI CCWWGG 4 cut(s) 193, 216, 464, 1208
FaeI CATG 8 cut(s) 29, 197, 220, 428, 468, 952, 973, 1164
FatI CATG 8 cut(s) 25, 193, 216, 424, 464, 948, 969, 1160
Fnu4HI GCNGC 6 cut(s) 137, 387, 473, 500, 1230, 1233
FokI GGATG 5 cut(s) 92, 395, 481, 656, 1010
Fsp4HI GCNGC 6 cut(s) 137, 387, 473, 500, 1230, 1233
FspBI CTAG 3 cut(s) 377, 725, 857
GluI GCNGC 6 cut(s) 137, 387, 473, 500, 1230, 1233
HaeIII GGCC 3 cut(s) 155, 207, 487
HapII CCGG 1 cut(s) 787
Hin1II CATG 8 cut(s) 29, 197, 220, 428, 468, 952, 973, 1164
HinfI GANTC 4 cut(s) 67, 795, 853, 1100
HpaII CCGG 1 cut(s) 787
HphI GGTGA 2 cut(s) 182, 1055
Hpy166II GTNNAC 2 cut(s) 985, 1099
Hpy188I TCNGA 3 cut(s) 571, 905, 1068
Hpy188III TCNNGA 6 cut(s) 71, 125, 530, 632, 857, 982
Hpy8I GTNNAC 2 cut(s) 985, 1099
HpyAV CCTTC 4 cut(s) 197, 576, 629, 1168
HpyCH4III ACNGT 4 cut(s) 419, 581, 901, 935
HpyCH4IV ACGT 2 cut(s) 480, 615
HpyCH4V TGCA 7 cut(s) 386, 433, 475, 992, 1152, 1200, 1232
HpyF10VI GCNNNNNNNGC 4 cut(s) 318, 674, 1015, 1281
HpyF3I CTNAG 3 cut(s) 585, 1285, 1299
HpySE526I ACGT 2 cut(s) 480, 615
Hsp92II CATG 8 cut(s) 29, 197, 220, 428, 468, 952, 973, 1164
KpnI GGTACC 1 cut(s) 241
Kzo9I GATC 5 cut(s) 445, 535, 628, 812, 973
LguI GCTCTTC 1 cut(s) 216
LmnI GCTCC 5 cut(s) 25, 94, 277, 638, 1248
Lsp1109I GCAGC 5 cut(s) 398, 459, 486, 1216, 1244
LweI GCATC 3 cut(s) 373, 459, 780
MaeI CTAG 3 cut(s) 377, 725, 857
MaeII ACGT 2 cut(s) 480, 615
MaeIII GTNAC 5 cut(s) 326, 353, 575, 780, 1043
MalI GATC 5 cut(s) 447, 537, 630, 814, 975
MbiI CCGCTC 1 cut(s) 641
MboI GATC 5 cut(s) 445, 535, 628, 812, 973
MboII GAAGA 6 cut(s) 93, 179, 233, 514, 613, 1145
MflI RGATCY 2 cut(s) 535, 628
MhlI GDGCHC 3 cut(s) 228, 282, 1277
MlyI GAGTC 2 cut(s) 804, 1094
MmeI TCCRAC 1 cut(s) 57
MroXI GAANNNNTTC 1 cut(s) 1109
MseI TTAA 4 cut(s) 456, 1014, 1071, 1184
MspA1I CMGCKG 1 cut(s) 1235
MspI CCGG 1 cut(s) 787
MspR9I CCNGG 2 cut(s) 265, 788
Mva1269I GAATGC 1 cut(s) 389
MvaI CCWGG 1 cut(s) 265
MwoI GCNNNNNNNGC 4 cut(s) 318, 674, 1015, 1281
NciI CCSGG 1 cut(s) 788
NcoI CCATGG 3 cut(s) 193, 216, 464
NdeII GATC 5 cut(s) 445, 535, 628, 812, 973
NlaIII CATG 8 cut(s) 29, 197, 220, 428, 468, 952, 973, 1164
NlaIV GGNNCC 3 cut(s) 90, 239, 416
NmuCI GTSAC 2 cut(s) 353, 1043
PceI AGGCCT 2 cut(s) 155, 207
PciSI GCTCTTC 1 cut(s) 216
PcsI WCGNNNNNNNCGW 1 cut(s) 136
PctI GAATGC 1 cut(s) 389
PdmI GAANNNNTTC 1 cut(s) 1109
PfeI GAWTC 2 cut(s) 67, 853
PflMI CCANNNNNTGG 1 cut(s) 937
PkrI GCNGC 6 cut(s) 138, 388, 474, 501, 1231, 1234
PleI GAGTC 2 cut(s) 803, 1094
PpsI GAGTC 2 cut(s) 803, 1094
Ppu21I YACGTR 1 cut(s) 616
PpuMI RGGWCCY 1 cut(s) 182
PsiI TTATAA 1 cut(s) 672
Psp5II RGGWCCY 1 cut(s) 182
Psp6I CCWGG 1 cut(s) 263
PspGI CCWGG 1 cut(s) 263
PspN4I GGNNCC 3 cut(s) 90, 239, 416
PspPI GGNCC 2 cut(s) 182, 301
PspPPI RGGWCCY 1 cut(s) 182
PsrI GAACNNNNNNTAC 2 cut(s) 357, 389
PstI CTGCAG 2 cut(s) 477, 1234
PsuI RGATCY 2 cut(s) 535, 628
PvuII CAGCTG 1 cut(s) 1235
RsaI GTAC 5 cut(s) 239, 564, 583, 1148, 1251
RsaNI GTAC 5 cut(s) 238, 563, 582, 1147, 1250
SapI GCTCTTC 1 cut(s) 216
SaqAI TTAA 4 cut(s) 456, 1014, 1071, 1184
SatI GCNGC 6 cut(s) 137, 387, 473, 500, 1230, 1233
Sau3AI GATC 5 cut(s) 445, 535, 628, 812, 973
Sau96I GGNCC 2 cut(s) 182, 301
ScaI AGTACT 1 cut(s) 1148
SchI GAGTC 2 cut(s) 804, 1094
ScrFI CCNGG 2 cut(s) 265, 788
SduI GDGCHC 3 cut(s) 228, 282, 1277
SfaNI GCATC 3 cut(s) 373, 459, 780
SfcI CTRYAG 4 cut(s) 115, 177, 473, 1230
SinI GGWCC 2 cut(s) 182, 301
SmlI CTYRAG 2 cut(s) 165, 530
SmoI CTYRAG 2 cut(s) 165, 530
SseBI AGGCCT 2 cut(s) 155, 207
SsiI CCGC 3 cut(s) 136, 641, 716
SspMI CTAG 3 cut(s) 377, 725, 857
StuI AGGCCT 2 cut(s) 155, 207
StyD4I CCNGG 2 cut(s) 263, 786
StyI CCWWGG 4 cut(s) 193, 216, 464, 1208
TaaI ACNGT 4 cut(s) 419, 581, 901, 935
TaiI ACGT 2 cut(s) 483, 618
TaqI TCGA 7 cut(s) 33, 342, 558, 596, 690, 831, 1103
TatI WGTACW 2 cut(s) 581, 1146
TauI GCSGC 1 cut(s) 139
TfiI GAWTC 2 cut(s) 67, 853
Tru1I TTAA 4 cut(s) 456, 1014, 1071, 1184
Tru9I TTAA 4 cut(s) 456, 1014, 1071, 1184
TscAI CASTG 4 cut(s) 358, 938, 994, 1057
TseFI GTSAC 2 cut(s) 353, 1043
TseI GCWGC 5 cut(s) 386, 472, 499, 1229, 1232
Tsp45I GTSAC 2 cut(s) 353, 1043
TspDTI ATGAA 6 cut(s) 80, 382, 441, 900, 965, 1149
TspGWI ACGGA 2 cut(s) 39, 1035
TspRI CASTG 4 cut(s) 358, 938, 994, 1057
Van91I CCANNNNNTGG 1 cut(s) 937
VpaK11BI GGWCC 2 cut(s) 182, 301
XapI RAATTY 3 cut(s) 649, 861, 1180
XbaI TCTAGA 1 cut(s) 856
XcmI CCANNNNNNNNNTGG 1 cut(s) 271
XmnI GAANNNNTTC 1 cut(s) 1109
XspI CTAG 3 cut(s) 377, 725, 857
ZrmI AGTACT 1 cut(s) 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.