MD15G1122400.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000131
Physical Location & Seq
Reverse (-)
8779308 .. 8780594
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1122400.v1.1.491

Sequence Viewer

Length: 1287 bp
ATGGAAGGAAGCAACGAAGCTACACATGACTTCGAAAATCCTCGCATTCAGTTAACAACTTCAATGAGTCAGGAGTTGGATGGTTTGACTCCCTTGTCCGCTTCGTGTTGCATCTACAAAGTTCCCGAACAACTACGGTGTGTAAATGAAAAGGCCTACACACCTCAAGTAGTCTCTATAGGTCCGATTCACCATGGCAAGAAAGGCTTAGAAGACATGGAAGAACACAAGAAGAGGTACCTGCAGTATTTTTTATATCGGACTGGGGTCAGCTTGGAAGATTATGTAACGAAAATAAAGGGCAAGGAAGAGAAATTGCGCAGTTGCTATGCTCACACCATTGAGTTGTGCAGTGATGAATTTGTAAGAATCATTCTTGTGGATGCCGCGTTCATCATTGAGCTCTTATTGAGGTACGGGGGGTATATCGTTCACGATAGCAATGACCGCATCTTTAACAAACCATGGTTGATAAATATTATATGTCCTGACATGCTTTTGCTTGAAAATCAGCTGCCATTTTTCATTCTTGAGGATCTCTTTGCCACTGCAGAGGTGCCGGCGACGGTGCCTTCAGTATTTGATCTCTCATACACTTACTGCAAGGTATCAACGAGTTTATATGTGAAAAGAGACGGTTTGGGATCTTCTTCTAGTTTTAAAGTAGAGCATTTTGTTGATTTGGTTAGAACCTTAAATCTACCAACGGATCAGGAAGAGAATGAAAATCGAGGGTCAGTCGAATCTCTAGCTGTACCCAGTATGACGAAACTACACCAGGCTGGCGTCAAGTTTAAGGCGAGATCAAGCAAGAATCTATTTGATATGTGTTTTCAAGAAGGGATTTTGGAAATTCCAAATCTAAATATATCCGATAGCACGGAGCTTGTACTCCGAAACCTTGTTGCCTTTGAGCAATGCCATTGCACTCCAAATACCCGCTACTTTAATGATTATATCTTCCTCATGGATTATTTGGTGAACACCCCAAATGATGTGGAATTGCTTGTCAAGAATGGAATTGTTGAAAATATGCTTGGTGACAACAATGAGGTGTCTACTCTGATCAACAGCCTTGGCAAAGGTGTTTTGGTGTTCAGAGACGAATTCTATTATGCTACTCTTATGAAGGACCTCAACAAGTACTACGAAAAGCCGTGGAACAAATGGAAGGCAGATCTGAAACATAAATATTTCAACACACCTTGGAAAATTATTTCAGTCATTGCTGCTACTTTTATCATCATACTCACTCTCATACAAACGGTGTCGTCTATTGCTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

429

Amino Acids

48.98

Weight (kDa)

5.41

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 38 - 417 4.1e-126 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 94
Acc16I TGCGCA 1 cut(s) 320
Acc36I ACCTGC 1 cut(s) 249
Acc65I GGTACC 1 cut(s) 237
AccB1I GGYRCC 3 cut(s) 237, 556, 568
AccI GTMKAC 1 cut(s) 1058
AccII CGCG 1 cut(s) 389
AciI CCGC 4 cut(s) 99, 387, 448, 940
AclWI GGATC 3 cut(s) 543, 652, 717
AcsI RAATTY 3 cut(s) 359, 852, 1106
AcuI CTGAAG 1 cut(s) 558
AcyI GRCGYC 1 cut(s) 786
AfaI GTAC 5 cut(s) 239, 416, 756, 891, 1145
AgsI TTSAA 5 cut(s) 63, 506, 836, 1028, 1198
AjnI CCWGG 1 cut(s) 777
AjuI GAANNNNNNNTTGG 2 cut(s) 1020, 1052
AloI GAACNNNNNNTCC 2 cut(s) 374, 406
AluBI AGCT 7 cut(s) 20, 273, 403, 514, 752, 886, 1284
AluI AGCT 7 cut(s) 20, 273, 403, 514, 752, 886, 1284
Alw21I GWGCWC 1 cut(s) 405
Alw26I GTCTC 3 cut(s) 178, 627, 1095
AlwI GGATC 3 cut(s) 543, 652, 717
AoxI GGCC 1 cut(s) 153
ApeKI GCWGC 2 cut(s) 514, 1229
ApoI RAATTY 3 cut(s) 359, 852, 1106
Asp718I GGTACC 1 cut(s) 237
AspLEI GCGC 1 cut(s) 321
AspS9I GGNCC 2 cut(s) 182, 1132
AsuHPI GGTGA 3 cut(s) 182, 991, 1052
AsuII TTCGAA 1 cut(s) 33
AsuNHI GCTAGC 1 cut(s) 1280
AvaII GGWCC 2 cut(s) 182, 1132
BanI GGYRCC 3 cut(s) 237, 556, 568
BanII GRGCYC 1 cut(s) 405
BbsI GAAGAC 1 cut(s) 219
Bbv12I GWGCWC 1 cut(s) 405
BbvI GCAGC 2 cut(s) 501, 1216
BccI CCATC 1 cut(s) 74
BceAI ACGGC 1 cut(s) 1141
BciT130I CCWGG 1 cut(s) 779
BclI TGATCA 1 cut(s) 1065
BcoDI GTCTC 3 cut(s) 178, 627, 1095
BfaI CTAG 3 cut(s) 654, 749, 1281
BfmI CTRYAG 3 cut(s) 177, 242, 549
BfuAI ACCTGC 1 cut(s) 249
BglII AGATCT 1 cut(s) 1177
BisI GCNGC 3 cut(s) 387, 515, 1230
BlsI GCNGC 3 cut(s) 388, 516, 1231
BmcAI AGTACT 1 cut(s) 1145
Bme1390I CCNGG 1 cut(s) 779
Bme18I GGWCC 2 cut(s) 182, 1132
BmgT120I GGNCC 2 cut(s) 182, 1132
BmiI GGNNCC 3 cut(s) 239, 558, 570
BmrFI CCNGG 1 cut(s) 779
BmrI ACTGGG 2 cut(s) 273, 753
BmsI GCATC 3 cut(s) 120, 373, 459
BmtI GCTAGC 1 cut(s) 1284
BmuI ACTGGG 2 cut(s) 273, 753
BoxI GACNNNNGTC 1 cut(s) 266
BpiI GAAGAC 1 cut(s) 219
Bpu14I TTCGAA 1 cut(s) 33
BpuEI CTTGAG 2 cut(s) 150, 551
BsaHI GRCGYC 1 cut(s) 786
BsaJI CCNNGG 5 cut(s) 193, 464, 1075, 1157, 1205
Bse118I RCCGGY 1 cut(s) 559
Bse1I ACTGG 2 cut(s) 268, 759
Bse3DI GCAATG 4 cut(s) 448, 922, 923, 1224
BseBI CCWGG 1 cut(s) 779
BseDI CCNNGG 5 cut(s) 193, 464, 1075, 1157, 1205
BseGI GGATG 2 cut(s) 85, 388
BseMI GCAATG 4 cut(s) 448, 922, 923, 1224
BseNI ACTGG 2 cut(s) 268, 759
BseXI GCAGC 2 cut(s) 501, 1216
BsgI GTGCAG 1 cut(s) 370
Bsh1236I CGCG 1 cut(s) 389
BshFI GGCC 1 cut(s) 155
BshNI GGYRCC 3 cut(s) 237, 556, 568
BsiHKAI GWGCWC 1 cut(s) 405
BsiSI CCGG 1 cut(s) 560
BsmAI GTCTC 3 cut(s) 178, 627, 1095
BsmBI CGTCTC 2 cut(s) 627, 1095
BsmI GAATGC 1 cut(s) 45
BsnI GGCC 1 cut(s) 155
Bsp119I TTCGAA 1 cut(s) 33
Bsp1286I GDGCHC 1 cut(s) 405
Bsp143I GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
Bsp19I CCATGG 2 cut(s) 193, 464
BspACI CCGC 4 cut(s) 99, 387, 448, 940
BspANI GGCC 1 cut(s) 155
BspFNI CGCG 1 cut(s) 389
BspLI GGNNCC 3 cut(s) 239, 558, 570
BspMAI CTGCAG 2 cut(s) 246, 553
BspMI ACCTGC 1 cut(s) 249
BspOI GCTAGC 1 cut(s) 1284
BspPI GGATC 3 cut(s) 543, 652, 717
BspT104I TTCGAA 1 cut(s) 33
BspT107I GGYRCC 3 cut(s) 237, 556, 568
BsrDI GCAATG 4 cut(s) 448, 922, 923, 1224
BsrFI RCCGGY 1 cut(s) 559
BsrI ACTGG 2 cut(s) 268, 759
BssAI RCCGGY 1 cut(s) 559
BssECI CCNNGG 5 cut(s) 193, 464, 1075, 1157, 1205
BssMI GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
BssNI GRCGYC 1 cut(s) 786
BssT1I CCWWGG 4 cut(s) 193, 464, 1075, 1205
Bst2UI CCWGG 1 cut(s) 779
Bst4CI ACNGT 4 cut(s) 138, 568, 638, 1267
Bst6I CTCTTC 3 cut(s) 227, 303, 711
BstACI GRCGYC 1 cut(s) 786
BstBI TTCGAA 1 cut(s) 33
BstC8I GCNNGC 3 cut(s) 561, 784, 1282
BstDEI CTNAG 1 cut(s) 208
BstDSI CCRYGG 3 cut(s) 193, 464, 1157
BstF5I GGATG 2 cut(s) 85, 388
BstFNI CGCG 1 cut(s) 389
BstHHI GCGC 1 cut(s) 321
BstKTI GATC 7 cut(s) 538, 586, 647, 712, 806, 1068, 1180
BstMAI GTCTC 3 cut(s) 178, 627, 1095
BstMBI GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
BstMWI GCNNNNNNNGC 2 cut(s) 204, 447
BstNI CCWGG 1 cut(s) 779
BstNSI RCATGY 1 cut(s) 496
BstPAI GACNNNNGTC 1 cut(s) 266
BstSCI CCNGG 1 cut(s) 777
BstSFI CTRYAG 3 cut(s) 177, 242, 549
BstUI CGCG 1 cut(s) 389
BstV1I GCAGC 2 cut(s) 501, 1216
BstV2I GAAGAC 1 cut(s) 219
BstX2I RGATCY 3 cut(s) 535, 644, 1177
BstYI RGATCY 3 cut(s) 535, 644, 1177
BsuRI GGCC 1 cut(s) 155
BtgI CCRYGG 3 cut(s) 193, 464, 1157
BtsCI GGATG 2 cut(s) 85, 388
BtsI GCAGTG 2 cut(s) 358, 546
BtsIMutI CAGTG 2 cut(s) 358, 546
BveI ACCTGC 1 cut(s) 249
Cac8I GCNNGC 3 cut(s) 561, 784, 1282
CfoI GCGC 1 cut(s) 321
Cfr10I RCCGGY 1 cut(s) 559
Cfr13I GGNCC 2 cut(s) 182, 1132
CseI GACGC 1 cut(s) 775
Csp6I GTAC 5 cut(s) 238, 415, 755, 890, 1144
CspCI CAANNNNNGTGG 2 cut(s) 978, 1013
CviAII CATG 6 cut(s) 26, 194, 217, 465, 493, 967
CviQI GTAC 5 cut(s) 238, 415, 755, 890, 1144
DdeI CTNAG 1 cut(s) 208
DpnI GATC 7 cut(s) 537, 585, 646, 711, 805, 1067, 1179
DpnII GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
DraI TTTAAA 1 cut(s) 661
DrdI GACNNNNNNGTC 1 cut(s) 94
DseDI GACNNNNNNGTC 1 cut(s) 94
Eam1104I CTCTTC 3 cut(s) 227, 303, 711
EarI CTCTTC 3 cut(s) 227, 303, 711
Ecl136II GAGCTC 1 cut(s) 403
Eco130I CCWWGG 4 cut(s) 193, 464, 1075, 1205
Eco147I AGGCCT 1 cut(s) 155
Eco24I GRGCYC 1 cut(s) 405
Eco47I GGWCC 2 cut(s) 182, 1132
Eco53kI GAGCTC 1 cut(s) 403
Eco57I CTGAAG 1 cut(s) 558
EcoICRI GAGCTC 1 cut(s) 403
EcoO109I RGGNCCY 1 cut(s) 1132
EcoRI GAATTC 1 cut(s) 1106
EcoRII CCWGG 1 cut(s) 777
EcoT14I CCWWGG 4 cut(s) 193, 464, 1075, 1205
EcoT38I GRGCYC 1 cut(s) 405
ErhI CCWWGG 4 cut(s) 193, 464, 1075, 1205
Esp3I CGTCTC 2 cut(s) 627, 1095
FaeI CATG 6 cut(s) 29, 197, 220, 468, 496, 970
FalI AAGNNNNNCTT 2 cut(s) 191, 223
FatI CATG 6 cut(s) 25, 193, 216, 464, 492, 966
FauI CCCGC 1 cut(s) 947
FbaI TGATCA 1 cut(s) 1065
FblI GTMKAC 1 cut(s) 1058
Fnu4HI GCNGC 3 cut(s) 387, 515, 1230
FokI GGATG 2 cut(s) 92, 395
FriOI GRGCYC 1 cut(s) 405
Fsp4HI GCNGC 3 cut(s) 387, 515, 1230
FspBI CTAG 3 cut(s) 654, 749, 1281
FspI TGCGCA 1 cut(s) 320
GlaI GCGC 1 cut(s) 320
GluI GCNGC 3 cut(s) 387, 515, 1230
HaeIII GGCC 1 cut(s) 155
HapII CCGG 1 cut(s) 560
HgaI GACGC 1 cut(s) 775
HhaI GCGC 1 cut(s) 321
Hin1I GRCGYC 1 cut(s) 786
Hin1II CATG 6 cut(s) 29, 197, 220, 468, 496, 970
Hin6I GCGC 1 cut(s) 319
HinP1I GCGC 1 cut(s) 319
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HinfI GANTC 6 cut(s) 67, 88, 187, 369, 743, 814
HpaI GTTAAC 1 cut(s) 54
HpaII CCGG 1 cut(s) 560
HphI GGTGA 3 cut(s) 182, 991, 1052
Hpy166II GTNNAC 4 cut(s) 54, 433, 982, 1059
Hpy188I TCNGA 7 cut(s) 186, 261, 874, 896, 1065, 1100, 1182
Hpy188III TCNNGA 8 cut(s) 71, 125, 434, 488, 530, 713, 836, 1012
Hpy8I GTNNAC 4 cut(s) 54, 433, 982, 1059
Hpy99I CGWCG 1 cut(s) 568
HpyAV CCTTC 4 cut(s) 582, 833, 1123, 1165
HpyCH4III ACNGT 4 cut(s) 138, 568, 638, 1267
HpyCH4V TGCA 6 cut(s) 111, 244, 351, 551, 603, 927
HpyF10VI GCNNNNNNNGC 2 cut(s) 204, 447
HpyF3I CTNAG 1 cut(s) 208
Hsp92I GRCGYC 1 cut(s) 786
Hsp92II CATG 6 cut(s) 29, 197, 220, 468, 496, 970
HspAI GCGC 1 cut(s) 319
KpnI GGTACC 1 cut(s) 241
KroI GCCGGC 1 cut(s) 559
KroNI GCCGGC 1 cut(s) 561
Ksp22I TGATCA 1 cut(s) 1065
KspAI GTTAAC 1 cut(s) 54
Kzo9I GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
LmnI GCTCC 1 cut(s) 883
Lsp1109I GCAGC 2 cut(s) 501, 1216
LweI GCATC 3 cut(s) 120, 373, 459
MaeI CTAG 3 cut(s) 654, 749, 1281
MaeIII GTNAC 2 cut(s) 286, 1040
MalI GATC 7 cut(s) 537, 585, 646, 711, 805, 1067, 1179
MboI GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
MboII GAAGA 9 cut(s) 224, 233, 244, 290, 320, 639, 642, 728, 952
MflI RGATCY 3 cut(s) 535, 644, 1177
MhlI GDGCHC 1 cut(s) 405
MluCI AATT 7 cut(s) 314, 359, 852, 1001, 1020, 1106, 1212
MlyI GAGTC 2 cut(s) 76, 82
MmeI TCCRAC 1 cut(s) 57
MroNI GCCGGC 1 cut(s) 559
MseI TTAA 6 cut(s) 53, 456, 660, 695, 795, 948
MslI CAYNNNNRTG 1 cut(s) 377
MspA1I CMGCKG 1 cut(s) 514
MspI CCGG 1 cut(s) 560
MspR9I CCNGG 1 cut(s) 779
Mva1269I GAATGC 1 cut(s) 45
MvaI CCWGG 1 cut(s) 779
MvnI CGCG 1 cut(s) 389
MwoI GCNNNNNNNGC 2 cut(s) 204, 447
NaeI GCCGGC 1 cut(s) 561
NcoI CCATGG 2 cut(s) 193, 464
NdeII GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
NgoMIV GCCGGC 1 cut(s) 559
NheI GCTAGC 1 cut(s) 1280
NlaIII CATG 6 cut(s) 29, 197, 220, 468, 496, 970
NlaIV GGNNCC 3 cut(s) 239, 558, 570
NmuCI GTSAC 1 cut(s) 1040
NsbI TGCGCA 1 cut(s) 320
NspI RCATGY 1 cut(s) 496
NspV TTCGAA 1 cut(s) 33
PceI AGGCCT 1 cut(s) 155
PctI GAATGC 1 cut(s) 45
PdiI GCCGGC 1 cut(s) 561
PfeI GAWTC 4 cut(s) 187, 369, 743, 814
PkrI GCNGC 3 cut(s) 388, 516, 1231
PleI GAGTC 2 cut(s) 75, 82
PpsI GAGTC 2 cut(s) 75, 82
PpuMI RGGWCCY 1 cut(s) 1132
PshAI GACNNNNGTC 1 cut(s) 266
Psp124BI GAGCTC 1 cut(s) 405
Psp5II RGGWCCY 1 cut(s) 1132
Psp6I CCWGG 1 cut(s) 777
PspGI CCWGG 1 cut(s) 777
PspN4I GGNNCC 3 cut(s) 239, 558, 570
PspPI GGNCC 2 cut(s) 182, 1132
PspPPI RGGWCCY 1 cut(s) 1132
PstI CTGCAG 2 cut(s) 246, 553
PsuI RGATCY 3 cut(s) 535, 644, 1177
PvuII CAGCTG 1 cut(s) 514
RsaI GTAC 5 cut(s) 239, 416, 756, 891, 1145
RsaNI GTAC 5 cut(s) 238, 415, 755, 890, 1144
RseI CAYNNNNRTG 1 cut(s) 377
SacI GAGCTC 1 cut(s) 405
SaqAI TTAA 6 cut(s) 53, 456, 660, 695, 795, 948
SatI GCNGC 3 cut(s) 387, 515, 1230
Sau3AI GATC 7 cut(s) 535, 583, 644, 709, 803, 1065, 1177
Sau96I GGNCC 2 cut(s) 182, 1132
ScaI AGTACT 1 cut(s) 1145
SchI GAGTC 2 cut(s) 76, 82
ScrFI CCNGG 1 cut(s) 779
SduI GDGCHC 1 cut(s) 405
SfaNI GCATC 3 cut(s) 120, 373, 459
SfcI CTRYAG 3 cut(s) 177, 242, 549
SfuI TTCGAA 1 cut(s) 33
SinI GGWCC 2 cut(s) 182, 1132
SmiMI CAYNNNNRTG 1 cut(s) 377
SmlI CTYRAG 2 cut(s) 165, 530
SmoI CTYRAG 2 cut(s) 165, 530
Sse9I AATT 7 cut(s) 314, 359, 852, 1001, 1020, 1106, 1212
SseBI AGGCCT 1 cut(s) 155
SsiI CCGC 4 cut(s) 99, 387, 448, 940
SspI AATATT 2 cut(s) 478, 1193
SspMI CTAG 3 cut(s) 654, 749, 1281
SstI GAGCTC 1 cut(s) 405
StuI AGGCCT 1 cut(s) 155
StyD4I CCNGG 1 cut(s) 777
StyI CCWWGG 4 cut(s) 193, 464, 1075, 1205
TaaI ACNGT 4 cut(s) 138, 568, 638, 1267
TaqI TCGA 3 cut(s) 33, 730, 741
TasI AATT 7 cut(s) 314, 359, 852, 1001, 1020, 1106, 1212
TatI WGTACW 2 cut(s) 889, 1143
TauI GCSGC 1 cut(s) 389
TfiI GAWTC 4 cut(s) 187, 369, 743, 814
Tru1I TTAA 6 cut(s) 53, 456, 660, 695, 795, 948
Tru9I TTAA 6 cut(s) 53, 456, 660, 695, 795, 948
TscAI CASTG 2 cut(s) 358, 553
TseFI GTSAC 1 cut(s) 1040
TseI GCWGC 2 cut(s) 514, 1229
Tsp45I GTSAC 1 cut(s) 1040
TspDTI ATGAA 6 cut(s) 162, 372, 382, 514, 738, 1142
TspGWI ACGGA 2 cut(s) 722, 896
TspRI CASTG 2 cut(s) 358, 553
VpaK11BI GGWCC 2 cut(s) 182, 1132
XapI RAATTY 3 cut(s) 359, 852, 1106
XceI RCATGY 1 cut(s) 496
XmiI GTMKAC 1 cut(s) 1058
XspI CTAG 3 cut(s) 654, 749, 1281
ZrmI AGTACT 1 cut(s) 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.