RchiOBHm_Chr6g0298331

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000131
Physical Location & Seq
Reverse (-)
59794185 .. 59797344
3160 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26780

Sequence Viewer

Length: 1284 bp
ATGGAAGAGCAACATTTAGAAAAACTCAAAAACAAGCTGAAAGAGGTGTCTGTCCTTTCCACTGACTGTTGTATCTTCAGGGTTCCAAAGCGACTGCGTGAAGGGAATGAGAAGGCTTACACACCTCAGGTGGTCTCAATTGGTCCTCTTCACCATGGTGAAAAAGGGCTAGAATCCATAGAAGAGCACAAAATTCTGTATGTGAAGGACTTTTTGGAACGGACCAAGGTAAGCATCGATGATTGTTTCATTACATTAAAGCAATGGGAAGAAAAAATTCGTGGTTACTATGCAGTAACCATTGACTATAATGAAAATGAGCTTGTGGAAATTATTATGGTAGATGGCATTTTTACCTTGGAGGTTCTTCTGAGAGGTTCTTTCGAAACCTTACAAAAGAAAAATGACCGTATATTTGGAAAACCATTGATGCATAGGGACATAATATATGACATGTTGTTGCTCGAAAATCAGATCCCATTCTTTGTTCTCGAGTATCTCTTGTCCTTGGCCTATTCCACTAGTTTCTTTCCTATGGAACACGATACGGCTCATGTAACAGGGCTCCCCCTCATCAAGCTTACTCATAGTTTCTTCAAGGATAGGGTATACATTCGACCACTTGATGAAATCATTTGTAAACTTGATCAATATTCTGAATCTAGAAGAATACTACATTTTGTTGATTTTGTACTAAAATGTCATAGACCTCCACCTTTTGATCCTCCACCGAAAAGCAAACTCCAGACTTTAACCATACCGAGCGCAACAGAGCTGCACCAAGCTGGAGTCAAGTTCGAGATGGTTAAGGACAAGAACTTCTTTGACATTCAATTTGATAATGGGATTCTGAAGATCCCACAACTCAAAATCCGTGGTTCCTCAGAAGTTTTCTTTCGAAACCTGATTGCCTACGAGCAGTGTGAGTTCTATGATCATTACATAAACGATTACATTTTCATCATGGACCGGTTGGTTGACAGTGCCAAGGATGTGGAGCTGCTTCTCAGGAAAAAAATCCTTGAATCTAAGCTATCTGATAAAGAAAAAGTGGCTACTTTTATCAGCTCGCTTAACTCGGGGCCTGTGGTGTTCAGTAAAAAGTTCTACTTTACTGATCTTTGTGAGAAGCTGAATGCGTACTATGAAGTCCCATGGCACAACTGGAAGGCAAGCTTGAAACATGACTATTTTAGTTCTCCCTGGGCTGTGCTCTCTATTATTGCAGCGGCTGTTCTTCTTGTGCTCACTTTTGTTCAAACAGTGTGCTCTGTAATGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

427

Amino Acids

49.97

Weight (kDa)

6.29

Isoelectric Point (pI)

32.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 25 - 416 2.1e-114 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 609
AciI CCGC 1 cut(s) 1229
AclWI GGATC 3 cut(s) 469, 716, 850
AcsI RAATTY 2 cut(s) 192, 276
AcuI CTGAAG 2 cut(s) 61, 872
AfaI GTAC 3 cut(s) 693, 1142, 1280
AflIII ACRYGT 1 cut(s) 453
AgeI ACCGGT 1 cut(s) 969
AgsI TTSAA 5 cut(s) 598, 833, 1025, 1180, 1259
AhlI ACTAGT 1 cut(s) 521
AjnI CCWGG 1 cut(s) 1202
AjuI GAANNNNNNNTTGG 2 cut(s) 197, 229
AleI CACNNNNGTG 1 cut(s) 156
Alw21I GWGCWC 4 cut(s) 189, 1215, 1248, 1271
Alw26I GTCTC 1 cut(s) 139
AlwI GGATC 3 cut(s) 469, 716, 850
AlwNI CAGNNNCTG 1 cut(s) 1232
Ama87I CYCGRG 2 cut(s) 491, 1078
AoxI GGCC 2 cut(s) 510, 1082
ApeKI GCWGC 3 cut(s) 775, 1000, 1226
ApoI RAATTY 2 cut(s) 192, 276
ArsI GACNNNNNNTTYG 4 cut(s) 398, 430, 818, 850
AsiGI ACCGGT 1 cut(s) 969
Asp700I GAANNNNTTC 1 cut(s) 276
AspLEI GCGC 1 cut(s) 767
AspS9I GGNCC 4 cut(s) 143, 222, 967, 1082
AsuHPI GGTGA 2 cut(s) 143, 170
AsuII TTCGAA 2 cut(s) 384, 898
AvaI CYCGRG 2 cut(s) 491, 1078
AvaII GGWCC 3 cut(s) 143, 222, 967
AxyI CCTNAGG 1 cut(s) 126
BaeI ACNNNNGTAYC 2 cut(s) 55, 88
BanII GRGCYC 1 cut(s) 567
Bbv12I GWGCWC 4 cut(s) 189, 1215, 1248, 1271
BbvI GCAGC 3 cut(s) 762, 987, 1238
BccI CCATC 2 cut(s) 338, 796
BceAI ACGGC 1 cut(s) 564
BciT130I CCWGG 1 cut(s) 1204
BclI TGATCA 2 cut(s) 646, 934
BcoDI GTCTC 1 cut(s) 139
BcuI ACTAGT 1 cut(s) 521
BfaI CTAG 3 cut(s) 170, 522, 663
BisI GCNGC 4 cut(s) 776, 1001, 1227, 1230
BlsI GCNGC 4 cut(s) 777, 1002, 1228, 1231
Bme1390I CCNGG 1 cut(s) 1204
Bme18I GGWCC 3 cut(s) 143, 222, 967
BmeT110I CYCGRG 2 cut(s) 491, 1078
BmgT120I GGNCC 4 cut(s) 143, 222, 967, 1082
BmiI GGNNCC 4 cut(s) 84, 566, 880, 1083
BmrFI CCNGG 1 cut(s) 1204
BmsI GCATC 2 cut(s) 243, 420
BpmI CTGGAG 2 cut(s) 728, 807
Bpu14I TTCGAA 2 cut(s) 384, 898
Bsa29I ATCGAT 1 cut(s) 237
BsaI GGTCTC 1 cut(s) 139
BsaJI CCNNGG 9 cut(s) 154, 225, 357, 507, 874, 987, 1154, 1202, 1203
BsaWI WCCGGW 1 cut(s) 969
Bse118I RCCGGY 1 cut(s) 969
Bse1I ACTGG 1 cut(s) 1169
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 1 cut(s) 269
BseBI CCWGG 1 cut(s) 1204
BseCI ATCGAT 1 cut(s) 237
BseDI CCNNGG 9 cut(s) 154, 225, 357, 507, 874, 987, 1154, 1202, 1203
BseGI GGATG 1 cut(s) 997
BseMI GCAATG 1 cut(s) 269
BseMII CTCAG 4 cut(s) 140, 362, 897, 1021
BseNI ACTGG 1 cut(s) 1169
BseXI GCAGC 3 cut(s) 762, 987, 1238
BsgI GTGCAG 1 cut(s) 761
BshFI GGCC 2 cut(s) 512, 1084
BshTI ACCGGT 1 cut(s) 969
BshVI ATCGAT 1 cut(s) 237
BsiHKAI GWGCWC 4 cut(s) 189, 1215, 1248, 1271
BsiHKCI CYCGRG 2 cut(s) 491, 1078
BsiSI CCGG 1 cut(s) 970
BslFI GGGAC 2 cut(s) 452, 1136
BsmAI GTCTC 1 cut(s) 139
BsmFI GGGAC 2 cut(s) 452, 1136
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 2 cut(s) 512, 1084
Bso31I GGTCTC 1 cut(s) 139
BsoBI CYCGRG 2 cut(s) 491, 1078
Bsp119I TTCGAA 2 cut(s) 384, 898
Bsp1286I GDGCHC 5 cut(s) 189, 567, 1215, 1248, 1271
Bsp143I GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
Bsp19I CCATGG 2 cut(s) 154, 1154
BspACI CCGC 1 cut(s) 1229
BspANI GGCC 2 cut(s) 512, 1084
BspCNI CTCAG 4 cut(s) 139, 363, 896, 1020
BspDI ATCGAT 1 cut(s) 237
BspLI GGNNCC 4 cut(s) 84, 566, 880, 1083
BspPI GGATC 3 cut(s) 469, 716, 850
BspQI GCTCTTC 1 cut(s) 177
BspT104I TTCGAA 2 cut(s) 384, 898
BspTNI GGTCTC 1 cut(s) 139
BsrDI GCAATG 1 cut(s) 269
BsrFI RCCGGY 1 cut(s) 969
BsrI ACTGG 1 cut(s) 1169
BssAI RCCGGY 1 cut(s) 969
BssECI CCNNGG 9 cut(s) 154, 225, 357, 507, 874, 987, 1154, 1202, 1203
BssMI GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
BssNAI GTATAC 1 cut(s) 610
BssT1I CCWWGG 6 cut(s) 154, 225, 357, 507, 987, 1154
Bst1107I GTATAC 1 cut(s) 610
Bst2UI CCWGG 1 cut(s) 1204
Bst4CI ACNGT 4 cut(s) 68, 410, 983, 1264
Bst6I CTCTTC 2 cut(s) 153, 177
BstBI TTCGAA 2 cut(s) 384, 898
BstC8I GCNNGC 2 cut(s) 1070, 1174
BstDEI CTNAG 5 cut(s) 126, 371, 883, 1007, 1029
BstDSI CCRYGG 3 cut(s) 154, 874, 1154
BstF5I GGATG 1 cut(s) 997
BstHHI GCGC 1 cut(s) 767
BstKTI GATC 6 cut(s) 477, 649, 724, 858, 937, 1120
BstMAI GTCTC 1 cut(s) 139
BstMBI GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
BstNI CCWGG 1 cut(s) 1204
BstNSI RCATGY 1 cut(s) 457
BstSCI CCNGG 1 cut(s) 1202
BstV1I GCAGC 3 cut(s) 762, 987, 1238
BstX2I RGATCY 2 cut(s) 474, 855
BstXI CCANNNNNNTGG 1 cut(s) 994
BstYI RGATCY 2 cut(s) 474, 855
BstZ17I GTATAC 1 cut(s) 610
Bsu15I ATCGAT 1 cut(s) 237
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 2 cut(s) 512, 1084
BsuTUI ATCGAT 1 cut(s) 237
BtgI CCRYGG 3 cut(s) 154, 874, 1154
BtsCI GGATG 1 cut(s) 997
BtsI GCAGTG 1 cut(s) 926
BtsIMutI CAGTG 4 cut(s) 60, 926, 988, 1269
Cac8I GCNNGC 2 cut(s) 1070, 1174
CaiI CAGNNNCTG 1 cut(s) 1232
CfoI GCGC 1 cut(s) 767
Cfr10I RCCGGY 1 cut(s) 969
Cfr13I GGNCC 4 cut(s) 143, 222, 967, 1082
ClaI ATCGAT 1 cut(s) 237
Csp6I GTAC 3 cut(s) 692, 1141, 1279
CspAI ACCGGT 1 cut(s) 969
CspCI CAANNNNNGTGG 2 cut(s) 856, 891
CviAII CATG 6 cut(s) 155, 454, 554, 964, 1155, 1184
CviQI GTAC 3 cut(s) 692, 1141, 1279
DdeI CTNAG 5 cut(s) 126, 371, 883, 1007, 1029
DpnI GATC 6 cut(s) 476, 648, 723, 857, 936, 1119
DpnII GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
Eam1104I CTCTTC 2 cut(s) 153, 177
EarI CTCTTC 2 cut(s) 153, 177
Eco130I CCWWGG 6 cut(s) 154, 225, 357, 507, 987, 1154
Eco24I GRGCYC 1 cut(s) 567
Eco31I GGTCTC 1 cut(s) 139
Eco47I GGWCC 3 cut(s) 143, 222, 967
Eco57I CTGAAG 2 cut(s) 61, 872
Eco81I CCTNAGG 1 cut(s) 126
Eco88I CYCGRG 2 cut(s) 491, 1078
EcoO109I RGGNCCY 1 cut(s) 1082
EcoRII CCWGG 1 cut(s) 1202
EcoT14I CCWWGG 6 cut(s) 154, 225, 357, 507, 987, 1154
EcoT22I ATGCAT 1 cut(s) 435
EcoT38I GRGCYC 1 cut(s) 567
ErhI CCWWGG 6 cut(s) 154, 225, 357, 507, 987, 1154
FaeI CATG 6 cut(s) 158, 457, 557, 967, 1158, 1187
FalI AAGNNNNNCTT 6 cut(s) 806, 838, 1094, 1126, 1160, 1192
FaqI GGGAC 2 cut(s) 452, 1136
FatI CATG 6 cut(s) 154, 453, 553, 963, 1154, 1183
FbaI TGATCA 2 cut(s) 646, 934
FblI GTMKAC 1 cut(s) 609
Fnu4HI GCNGC 4 cut(s) 776, 1001, 1227, 1230
FokI GGATG 1 cut(s) 1004
FriOI GRGCYC 1 cut(s) 567
Fsp4HI GCNGC 4 cut(s) 776, 1001, 1227, 1230
FspBI CTAG 3 cut(s) 170, 522, 663
GlaI GCGC 1 cut(s) 766
GluI GCNGC 4 cut(s) 776, 1001, 1227, 1230
GsuI CTGGAG 2 cut(s) 728, 807
HaeIII GGCC 2 cut(s) 512, 1084
HapII CCGG 1 cut(s) 970
HhaI GCGC 1 cut(s) 767
Hin1II CATG 6 cut(s) 158, 457, 557, 967, 1158, 1187
Hin6I GCGC 1 cut(s) 765
HinP1I GCGC 1 cut(s) 765
HincII GTYRAC 1 cut(s) 979
HindII GTYRAC 1 cut(s) 979
HindIII AAGCTT 2 cut(s) 578, 1174
HinfI GANTC 5 cut(s) 173, 659, 789, 847, 1025
HpaII CCGG 1 cut(s) 970
HphI GGTGA 2 cut(s) 143, 170
Hpy166II GTNNAC 3 cut(s) 610, 641, 979
Hpy188I TCNGA 6 cut(s) 372, 474, 658, 852, 886, 1039
Hpy188III TCNNGA 5 cut(s) 491, 663, 745, 799, 1009
Hpy8I GTNNAC 3 cut(s) 610, 641, 979
HpyAV CCTTC 4 cut(s) 95, 106, 199, 1162
HpyCH4III ACNGT 4 cut(s) 68, 410, 983, 1264
HpyCH4V TGCA 4 cut(s) 293, 433, 778, 1226
HpyF3I CTNAG 5 cut(s) 126, 371, 883, 1007, 1029
Hsp92II CATG 6 cut(s) 158, 457, 557, 967, 1158, 1187
HspAI GCGC 1 cut(s) 765
Ksp22I TGATCA 2 cut(s) 646, 934
Kzo9I GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
LguI GCTCTTC 1 cut(s) 177
LmnI GCTCC 2 cut(s) 570, 997
Lsp1109I GCAGC 3 cut(s) 762, 987, 1238
LweI GCATC 2 cut(s) 243, 420
MaeI CTAG 3 cut(s) 170, 522, 663
MaeIII GTNAC 3 cut(s) 284, 295, 556
MalI GATC 6 cut(s) 476, 648, 723, 857, 936, 1119
MboI GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
MfeI CAATTG 1 cut(s) 138
MflI RGATCY 2 cut(s) 474, 855
MhlI GDGCHC 5 cut(s) 189, 567, 1215, 1248, 1271
MluCI AATT 5 cut(s) 138, 192, 276, 330, 833
MlyI GAGTC 1 cut(s) 798
MnlI CCTC 9 cut(s) 37, 135, 156, 355, 368, 581, 720, 735, 892
Mph1103I ATGCAT 1 cut(s) 435
MroXI GAANNNNTTC 1 cut(s) 276
MseI TTAA 4 cut(s) 257, 752, 807, 1074
MslI CAYNNNNRTG 1 cut(s) 156
MspA1I CMGCKG 1 cut(s) 1229
MspI CCGG 1 cut(s) 970
MspR9I CCNGG 1 cut(s) 1204
MunI CAATTG 1 cut(s) 138
Mva1269I GAATGC 1 cut(s) 1141
MvaI CCWGG 1 cut(s) 1204
NcoI CCATGG 2 cut(s) 154, 1154
NdeII GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
NlaIII CATG 6 cut(s) 158, 457, 557, 967, 1158, 1187
NlaIV GGNNCC 4 cut(s) 84, 566, 880, 1083
NsiI ATGCAT 1 cut(s) 435
NspI RCATGY 1 cut(s) 457
NspV TTCGAA 2 cut(s) 384, 898
OliI CACNNNNGTG 1 cut(s) 156
PaeR7I CTCGAG 1 cut(s) 491
PasI CCCWGGG 1 cut(s) 1203
PciI ACATGT 1 cut(s) 453
PciSI GCTCTTC 1 cut(s) 177
PctI GAATGC 1 cut(s) 1141
PdmI GAANNNNTTC 1 cut(s) 276
PfeI GAWTC 4 cut(s) 173, 659, 847, 1025
PinAI ACCGGT 1 cut(s) 969
PkrI GCNGC 4 cut(s) 777, 1002, 1228, 1231
PleI GAGTC 1 cut(s) 797
PpsI GAGTC 1 cut(s) 797
PscI ACATGT 1 cut(s) 453
Psp6I CCWGG 1 cut(s) 1202
PspGI CCWGG 1 cut(s) 1202
PspN4I GGNNCC 4 cut(s) 84, 566, 880, 1083
PspPI GGNCC 4 cut(s) 143, 222, 967, 1082
PstNI CAGNNNCTG 1 cut(s) 1232
PsuI RGATCY 2 cut(s) 474, 855
RsaI GTAC 3 cut(s) 693, 1142, 1280
RsaNI GTAC 3 cut(s) 692, 1141, 1279
RseI CAYNNNNRTG 1 cut(s) 156
SapI GCTCTTC 1 cut(s) 177
SaqAI TTAA 4 cut(s) 257, 752, 807, 1074
SatI GCNGC 4 cut(s) 776, 1001, 1227, 1230
Sau3AI GATC 6 cut(s) 474, 646, 721, 855, 934, 1117
Sau96I GGNCC 4 cut(s) 143, 222, 967, 1082
SchI GAGTC 1 cut(s) 798
ScrFI CCNGG 1 cut(s) 1204
SduI GDGCHC 5 cut(s) 189, 567, 1215, 1248, 1271
SfaNI GCATC 2 cut(s) 243, 420
Sfr274I CTCGAG 1 cut(s) 491
SfuI TTCGAA 2 cut(s) 384, 898
SinI GGWCC 3 cut(s) 143, 222, 967
SlaI CTCGAG 1 cut(s) 491
SmiMI CAYNNNNRTG 1 cut(s) 156
SmlI CTYRAG 1 cut(s) 491
SmoI CTYRAG 1 cut(s) 491
SpeI ACTAGT 1 cut(s) 521
Sse9I AATT 5 cut(s) 138, 192, 276, 330, 833
SsiI CCGC 1 cut(s) 1229
SspI AATATT 1 cut(s) 653
SspMI CTAG 3 cut(s) 170, 522, 663
StyD4I CCNGG 1 cut(s) 1202
StyI CCWWGG 6 cut(s) 154, 225, 357, 507, 987, 1154
TaaI ACNGT 4 cut(s) 68, 410, 983, 1264
TaqI TCGA 7 cut(s) 237, 384, 465, 492, 616, 798, 898
TasI AATT 5 cut(s) 138, 192, 276, 330, 833
TatI WGTACW 2 cut(s) 691, 1278
TauI GCSGC 1 cut(s) 1232
TfiI GAWTC 4 cut(s) 173, 659, 847, 1025
Tru1I TTAA 4 cut(s) 257, 752, 807, 1074
Tru9I TTAA 4 cut(s) 257, 752, 807, 1074
TscAI CASTG 4 cut(s) 67, 926, 988, 1269
TseI GCWGC 3 cut(s) 775, 1000, 1226
TspDTI ATGAA 5 cut(s) 238, 327, 642, 949, 1161
TspGWI ACGGA 2 cut(s) 235, 863
TspRI CASTG 4 cut(s) 67, 926, 988, 1269
VpaK11BI GGWCC 3 cut(s) 143, 222, 967
XapI RAATTY 2 cut(s) 192, 276
XbaI TCTAGA 1 cut(s) 662
XceI RCATGY 1 cut(s) 457
XcmI CCANNNNNNNNNTGG 1 cut(s) 1161
XhoI CTCGAG 1 cut(s) 491
XmiI GTMKAC 1 cut(s) 609
XmnI GAANNNNTTC 1 cut(s) 276
XspI CTAG 3 cut(s) 170, 522, 663
Zsp2I ATGCAT 1 cut(s) 435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.