Rroxscaffold_7G00201380

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000131
Physical Location & Seq
Reverse (-)
49042356 .. 49044620
2265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00201380.1

Sequence Viewer

Length: 1338 bp
ATGGAAGGAATCAATTATCGAGCTGCAAATGACATAGAAAACCCGTACAGTGAATTAGAAACTTCGATACTCAAGGAGTTGGATAGCTTGTCTTCCCTGTCCCCTTCGCGTTGTATCTACAGAGTTCCCGATGCACTACGGCGTGTACGTGAGAAGGCCTACACCCCTCGTGTAGTATCCATAGGTCCACTTCACCATGGAAATGAAGCCTTCAAAGCCATGGAAGAACATAAAAAGAGGTACCTAAAACATTTTATAGGTCGGAGAAACTTAAGCTTGAAGGATTATATAAGGAAAATAAAGGACCAAGAGACAAAACTGCGAAGTTGTTACGCGGAGACAGTTGACTTCGAAAGTGATGAATTTGTGAGAATCATCCTTGTGGATGCCATCTTCATCATTGAGTTCTTATATAGGTCCTGGTACCCTAATTTGGTTGATGAGAATGACTGCATATTTGGAAAAGCAAGGTTAATACAAGGTGTATGGCCGGACTTGTTGATGCTTGAAAATCAGCTGCCATTTTTTATTCTTGAGGACCTTTTCGACCCAAGAGATTTTCCTGTCCCTAGCCCCTCTAAAGTGAGTACTGGCAATATTGACAGACTTTCAATAATTTTTCTCTCTCACTGGTTCTTAAATGAGTATGCAATACAAATGGAGGAAAGGGATGACCAATTGAAGAAAATATGCTCTTCCATAATACAAGTACAACATTTTCTTGATCTCTTAAGGGCGTTATACATAGGACCTGCGGAATTAGTCTTGAAACGGCAACAAGTTGAAAAACCCAAAACTGTGACTGCACCCAACATTACAGAGCTACATCGCGCAGGAATCAAGTTTAAGGAGGGATCAACTACAGACTTACTTGACATACGTTTTATTGGTGGGATTCTAGAAATTCCAAAATTAAAAGTGTGGGATGACACCGAAATCATATTTAGAAATTTAGTGGCTTTTGAACTGTGCAATGACTTGGAGTACTACATAAGTGACTATGTTAGCATTATCGATTCTTTTGTGAACACCTCAGAGGATGTGGAATTGCTAGTTAAGTATGGACTTGTTGAAAATATGCTCGGTGACAACAGTCAGCTGTCTACTATGATTAACAGCCTTGCAGCTGGTGTTGAGCTTATCCCCTCTGAATTCTATTATGCTAGTCTTTGTGAAGATCTGAGCAAGTACTGCAGTTCAAAGTGGCACAGAAGTAGGGCAAATTTGAAACAAAATTATTTCAACACTCCTTGGCGTACTACGTCCGTCATTGCTGCTGCTGTTCTGCTCATACTCACTTTCATTCAAACAGTATGCTCTGCTCTCTCTATTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

445

Amino Acids

51.36

Weight (kDa)

5.4

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 39 - 432 1.3e-114 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 760
Acc65I GGTACC 2 cut(s) 240, 423
AccB1I GGYRCC 2 cut(s) 240, 423
AccI GTMKAC 1 cut(s) 1103
AccII CGCG 3 cut(s) 109, 335, 831
AciI CCGC 2 cut(s) 335, 755
AclWI GGATC 1 cut(s) 862
AcoI YGGCCR 1 cut(s) 488
AcsI RAATTY 5 cut(s) 362, 903, 949, 1151, 1222
AfaI GTAC 9 cut(s) 47, 147, 242, 425, 589, 711, 986, 1190, 1258
AfiI CCNNNNNNNGG 1 cut(s) 433
AflII CTTAAG 2 cut(s) 271, 730
AjnI CCWGG 1 cut(s) 419
AluBI AGCT 8 cut(s) 23, 87, 276, 517, 823, 1099, 1127, 1138
AluI AGCT 8 cut(s) 23, 87, 276, 517, 823, 1099, 1127, 1138
Alw26I GTCTC 2 cut(s) 305, 332
AlwI GGATC 1 cut(s) 862
AoxI GGCC 2 cut(s) 156, 488
ApeKI GCWGC 5 cut(s) 23, 517, 1124, 1274, 1277
ApoI RAATTY 5 cut(s) 362, 903, 949, 1151, 1222
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
Asp718I GGTACC 2 cut(s) 240, 423
AspLEI GCGC 1 cut(s) 833
AspS9I GGNCC 5 cut(s) 185, 304, 417, 538, 749
AsuHPI GGTGA 2 cut(s) 185, 1097
AsuII TTCGAA 1 cut(s) 351
AvaII GGWCC 5 cut(s) 185, 304, 417, 538, 749
BanI GGYRCC 2 cut(s) 240, 423
BauI CACGAG 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 84
BbvI GCAGC 5 cut(s) 10, 504, 1136, 1261, 1264
BccI CCATC 1 cut(s) 398
BceAI ACGGC 2 cut(s) 155, 788
BciT130I CCWGG 1 cut(s) 421
BciVI GTATCC 1 cut(s) 187
BcoDI GTCTC 2 cut(s) 305, 332
BfaI CTAG 4 cut(s) 570, 899, 1052, 1164
BfmI CTRYAG 3 cut(s) 118, 861, 1192
BfrI CTTAAG 2 cut(s) 271, 730
BfuAI ACCTGC 1 cut(s) 760
BfuI GTATCC 1 cut(s) 187
BglII AGATCT 1 cut(s) 1177
BisI GCNGC 5 cut(s) 24, 518, 1125, 1275, 1278
BlsI GCNGC 5 cut(s) 25, 519, 1126, 1276, 1279
BmcAI AGTACT 3 cut(s) 589, 986, 1190
Bme1390I CCNGG 1 cut(s) 421
Bme18I GGWCC 5 cut(s) 185, 304, 417, 538, 749
BmgT120I GGNCC 5 cut(s) 185, 304, 417, 538, 749
BmiI GGNNCC 2 cut(s) 242, 425
BmrFI CCNGG 1 cut(s) 421
BmsI GCATC 3 cut(s) 121, 376, 492
BoxI GACNNNNGTC 1 cut(s) 1092
BpiI GAAGAC 1 cut(s) 84
Bpu14I TTCGAA 1 cut(s) 351
BpuEI CTTGAG 2 cut(s) 56, 554
Bsa29I ATCGAT 1 cut(s) 1014
BsaAI YACGTR 1 cut(s) 149
BsaJI CCNNGG 3 cut(s) 196, 219, 1250
Bsc4I CCNNNNNNNGG 1 cut(s) 433
Bse1I ACTGG 2 cut(s) 595, 635
Bse3DI GCAATG 2 cut(s) 979, 1269
BseBI CCWGG 1 cut(s) 421
BseCI ATCGAT 1 cut(s) 1014
BseDI CCNNGG 3 cut(s) 196, 219, 1250
BseGI GGATG 5 cut(s) 375, 391, 676, 931, 1045
BseLI CCNNNNNNNGG 1 cut(s) 433
BseMI GCAATG 2 cut(s) 979, 1269
BseMII CTCAG 2 cut(s) 1047, 1172
BseNI ACTGG 2 cut(s) 595, 635
BseXI GCAGC 5 cut(s) 10, 504, 1136, 1261, 1264
BsgI GTGCAG 1 cut(s) 789
Bsh1236I CGCG 3 cut(s) 109, 335, 831
BshFI GGCC 2 cut(s) 158, 490
BshNI GGYRCC 2 cut(s) 240, 423
BshVI ATCGAT 1 cut(s) 1014
BsiSI CCGG 1 cut(s) 491
BslFI GGGAC 2 cut(s) 85, 551
BslI CCNNNNNNNGG 1 cut(s) 433
BsmAI GTCTC 2 cut(s) 305, 332
BsmFI GGGAC 2 cut(s) 85, 551
BsnI GGCC 2 cut(s) 158, 490
Bsp119I TTCGAA 1 cut(s) 351
Bsp143I GATC 3 cut(s) 724, 854, 1177
Bsp19I CCATGG 2 cut(s) 196, 219
BspACI CCGC 2 cut(s) 335, 755
BspANI GGCC 2 cut(s) 158, 490
BspCNI CTCAG 2 cut(s) 1046, 1173
BspDI ATCGAT 1 cut(s) 1014
BspFNI CGCG 3 cut(s) 109, 335, 831
BspLI GGNNCC 2 cut(s) 242, 425
BspMAI CTGCAG 1 cut(s) 1196
BspMI ACCTGC 1 cut(s) 760
BspPI GGATC 1 cut(s) 862
BspQI GCTCTTC 1 cut(s) 700
BspT104I TTCGAA 1 cut(s) 351
BspT107I GGYRCC 2 cut(s) 240, 423
BspTI CTTAAG 2 cut(s) 271, 730
BsrDI GCAATG 2 cut(s) 979, 1269
BsrI ACTGG 2 cut(s) 595, 635
BssECI CCNNGG 3 cut(s) 196, 219, 1250
BssMI GATC 3 cut(s) 724, 854, 1177
BssSI CACGAG 1 cut(s) 168
BssT1I CCWWGG 3 cut(s) 196, 219, 1250
Bst2BI CACGAG 1 cut(s) 168
Bst2UI CCWGG 1 cut(s) 421
Bst4CI ACNGT 6 cut(s) 50, 343, 799, 969, 1094, 1312
Bst6I CTCTTC 1 cut(s) 700
BstAFI CTTAAG 2 cut(s) 271, 730
BstAPI GCANNNNNTGC 1 cut(s) 1191
BstBAI YACGTR 1 cut(s) 149
BstBI TTCGAA 1 cut(s) 351
BstDEI CTNAG 2 cut(s) 1033, 1181
BstDSI CCRYGG 2 cut(s) 196, 219
BstF5I GGATG 5 cut(s) 375, 391, 676, 931, 1045
BstFNI CGCG 3 cut(s) 109, 335, 831
BstHHI GCGC 1 cut(s) 833
BstKTI GATC 3 cut(s) 727, 857, 1180
BstMAI GTCTC 2 cut(s) 305, 332
BstMBI GATC 3 cut(s) 724, 854, 1177
BstMWI GCNNNNNNNGC 2 cut(s) 215, 1191
BstNI CCWGG 1 cut(s) 421
BstPAI GACNNNNGTC 1 cut(s) 1092
BstSCI CCNGG 1 cut(s) 419
BstSFI CTRYAG 3 cut(s) 118, 861, 1192
BstUI CGCG 3 cut(s) 109, 335, 831
BstV1I GCAGC 5 cut(s) 10, 504, 1136, 1261, 1264
BstV2I GAAGAC 1 cut(s) 84
BstX2I RGATCY 1 cut(s) 1177
BstYI RGATCY 1 cut(s) 1177
Bsu15I ATCGAT 1 cut(s) 1014
BsuI GTATCC 1 cut(s) 187
BsuRI GGCC 2 cut(s) 158, 490
BsuTUI ATCGAT 1 cut(s) 1014
BtgI CCRYGG 2 cut(s) 196, 219
BtgZI GCGATG 1 cut(s) 812
BtsCI GGATG 5 cut(s) 375, 391, 676, 931, 1045
BtsIMutI CAGTG 2 cut(s) 55, 628
BveI ACCTGC 1 cut(s) 760
CfoI GCGC 1 cut(s) 833
Cfr13I GGNCC 5 cut(s) 185, 304, 417, 538, 749
ClaI ATCGAT 1 cut(s) 1014
Csp6I GTAC 9 cut(s) 46, 146, 241, 424, 588, 710, 985, 1189, 1257
CviAII CATG 2 cut(s) 197, 220
CviQI GTAC 9 cut(s) 46, 146, 241, 424, 588, 710, 985, 1189, 1257
DdeI CTNAG 2 cut(s) 1033, 1181
DpnI GATC 3 cut(s) 726, 856, 1179
DpnII GATC 3 cut(s) 724, 854, 1177
EaeI YGGCCR 1 cut(s) 488
Eam1104I CTCTTC 1 cut(s) 700
EarI CTCTTC 1 cut(s) 700
Eco130I CCWWGG 3 cut(s) 196, 219, 1250
Eco147I AGGCCT 1 cut(s) 158
Eco47I GGWCC 5 cut(s) 185, 304, 417, 538, 749
EcoO109I RGGNCCY 3 cut(s) 417, 538, 749
EcoRI GAATTC 1 cut(s) 1151
EcoRII CCWGG 1 cut(s) 419
EcoT14I CCWWGG 3 cut(s) 196, 219, 1250
ErhI CCWWGG 3 cut(s) 196, 219, 1250
FaeI CATG 2 cut(s) 200, 223
FaqI GGGAC 2 cut(s) 85, 551
FatI CATG 2 cut(s) 196, 219
FblI GTMKAC 1 cut(s) 1103
Fnu4HI GCNGC 5 cut(s) 24, 518, 1125, 1275, 1278
FokI GGATG 5 cut(s) 362, 398, 683, 938, 1052
Fsp4HI GCNGC 5 cut(s) 24, 518, 1125, 1275, 1278
FspBI CTAG 4 cut(s) 570, 899, 1052, 1164
GlaI GCGC 1 cut(s) 832
GluI GCNGC 5 cut(s) 24, 518, 1125, 1275, 1278
HaeIII GGCC 2 cut(s) 158, 490
HapII CCGG 1 cut(s) 491
HhaI GCGC 1 cut(s) 833
Hin1II CATG 2 cut(s) 200, 223
Hin6I GCGC 1 cut(s) 831
HinP1I GCGC 1 cut(s) 831
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HindIII AAGCTT 1 cut(s) 274
HinfI GANTC 5 cut(s) 9, 372, 837, 895, 1016
HpaII CCGG 1 cut(s) 491
HphI GGTGA 2 cut(s) 185, 1097
Hpy166II GTNNAC 5 cut(s) 146, 188, 346, 1027, 1104
Hpy188I TCNGA 4 cut(s) 264, 1036, 1150, 1182
Hpy188III TCNNGA 5 cut(s) 128, 533, 722, 766, 899
Hpy8I GTNNAC 5 cut(s) 146, 188, 346, 1027, 1104
HpyAV CCTTC 4 cut(s) 114, 148, 220, 274
HpyCH4III ACNGT 6 cut(s) 50, 343, 799, 969, 1094, 1312
HpyCH4IV ACGT 3 cut(s) 148, 880, 1262
HpyCH4V TGCA 8 cut(s) 26, 134, 453, 650, 806, 972, 1124, 1194
HpyF10VI GCNNNNNNNGC 2 cut(s) 215, 1191
HpyF3I CTNAG 2 cut(s) 1033, 1181
HpySE526I ACGT 3 cut(s) 148, 880, 1262
Hsp92II CATG 2 cut(s) 200, 223
HspAI GCGC 1 cut(s) 831
KpnI GGTACC 2 cut(s) 244, 427
Kzo9I GATC 3 cut(s) 724, 854, 1177
LguI GCTCTTC 1 cut(s) 700
Lsp1109I GCAGC 5 cut(s) 10, 504, 1136, 1261, 1264
LweI GCATC 3 cut(s) 121, 376, 492
MaeI CTAG 4 cut(s) 570, 899, 1052, 1164
MaeII ACGT 3 cut(s) 148, 880, 1262
MaeIII GTNAC 4 cut(s) 329, 799, 995, 1085
MalI GATC 3 cut(s) 726, 856, 1179
MboI GATC 3 cut(s) 724, 854, 1177
MboII GAAGA 6 cut(s) 84, 236, 385, 687, 694, 1187
MfeI CAATTG 1 cut(s) 677
MflI RGATCY 1 cut(s) 1177
MmeI TCCRAC 2 cut(s) 60, 242
MnlI CCTC 9 cut(s) 177, 231, 529, 586, 655, 844, 1030, 1042, 1156
MseI TTAA 9 cut(s) 272, 473, 638, 731, 846, 914, 1056, 1113, 1336
MslI CAYNNNNRTG 2 cut(s) 201, 380
MspA1I CMGCKG 3 cut(s) 517, 1099, 1127
MspCI CTTAAG 2 cut(s) 271, 730
MspI CCGG 1 cut(s) 491
MspR9I CCNGG 1 cut(s) 421
MunI CAATTG 1 cut(s) 677
MvaI CCWGG 1 cut(s) 421
MvnI CGCG 3 cut(s) 109, 335, 831
MwoI GCNNNNNNNGC 2 cut(s) 215, 1191
NcoI CCATGG 2 cut(s) 196, 219
NdeII GATC 3 cut(s) 724, 854, 1177
NlaIII CATG 2 cut(s) 200, 223
NlaIV GGNNCC 2 cut(s) 242, 425
NmuCI GTSAC 3 cut(s) 799, 995, 1085
NspV TTCGAA 1 cut(s) 351
PceI AGGCCT 1 cut(s) 158
PciSI GCTCTTC 1 cut(s) 700
PcsI WCGNNNNNNNCGW 1 cut(s) 145
PfeI GAWTC 5 cut(s) 9, 372, 837, 895, 1016
PkrI GCNGC 5 cut(s) 25, 519, 1126, 1276, 1279
Ppu21I YACGTR 1 cut(s) 149
PpuMI RGGWCCY 3 cut(s) 417, 538, 749
PshAI GACNNNNGTC 1 cut(s) 1092
Psp5II RGGWCCY 3 cut(s) 417, 538, 749
Psp6I CCWGG 1 cut(s) 419
PspGI CCWGG 1 cut(s) 419
PspN4I GGNNCC 2 cut(s) 242, 425
PspPI GGNCC 5 cut(s) 185, 304, 417, 538, 749
PspPPI RGGWCCY 3 cut(s) 417, 538, 749
PstI CTGCAG 1 cut(s) 1196
PsuI RGATCY 1 cut(s) 1177
PvuII CAGCTG 3 cut(s) 517, 1099, 1127
RsaI GTAC 9 cut(s) 47, 147, 242, 425, 589, 711, 986, 1190, 1258
RsaNI GTAC 9 cut(s) 46, 146, 241, 424, 588, 710, 985, 1189, 1257
RseI CAYNNNNRTG 2 cut(s) 201, 380
SapI GCTCTTC 1 cut(s) 700
SaqAI TTAA 9 cut(s) 272, 473, 638, 731, 846, 914, 1056, 1113, 1336
SatI GCNGC 5 cut(s) 24, 518, 1125, 1275, 1278
Sau3AI GATC 3 cut(s) 724, 854, 1177
Sau96I GGNCC 5 cut(s) 185, 304, 417, 538, 749
ScaI AGTACT 3 cut(s) 589, 986, 1190
ScrFI CCNGG 1 cut(s) 421
SfaNI GCATC 3 cut(s) 121, 376, 492
SfcI CTRYAG 3 cut(s) 118, 861, 1192
SfuI TTCGAA 1 cut(s) 351
SinI GGWCC 5 cut(s) 185, 304, 417, 538, 749
SmiMI CAYNNNNRTG 2 cut(s) 201, 380
SmlI CTYRAG 4 cut(s) 71, 271, 533, 730
SmoI CTYRAG 4 cut(s) 71, 271, 533, 730
SseBI AGGCCT 1 cut(s) 158
SsiI CCGC 2 cut(s) 335, 755
SspI AATATT 1 cut(s) 598
SspMI CTAG 4 cut(s) 570, 899, 1052, 1164
StuI AGGCCT 1 cut(s) 158
StyD4I CCNGG 1 cut(s) 419
StyI CCWWGG 3 cut(s) 196, 219, 1250
TaaI ACNGT 6 cut(s) 50, 343, 799, 969, 1094, 1312
TaiI ACGT 3 cut(s) 151, 883, 1265
TaqI TCGA 5 cut(s) 19, 65, 351, 546, 1014
TatI WGTACW 4 cut(s) 587, 709, 984, 1188
TfiI GAWTC 5 cut(s) 9, 372, 837, 895, 1016
Tru1I TTAA 9 cut(s) 272, 473, 638, 731, 846, 914, 1056, 1113, 1336
Tru9I TTAA 9 cut(s) 272, 473, 638, 731, 846, 914, 1056, 1113, 1336
TscAI CASTG 2 cut(s) 55, 635
TseFI GTSAC 3 cut(s) 799, 995, 1085
TseI GCWGC 5 cut(s) 23, 517, 1124, 1274, 1277
Tsp45I GTSAC 3 cut(s) 799, 995, 1085
TspDTI ATGAA 4 cut(s) 219, 375, 385, 1291
TspGWI ACGGA 1 cut(s) 1255
TspRI CASTG 2 cut(s) 55, 635
Vha464I CTTAAG 2 cut(s) 271, 730
VpaK11BI GGWCC 5 cut(s) 185, 304, 417, 538, 749
XapI RAATTY 5 cut(s) 362, 903, 949, 1151, 1222
XbaI TCTAGA 1 cut(s) 898
XmiI GTMKAC 1 cut(s) 1103
XspI CTAG 4 cut(s) 570, 899, 1052, 1164
ZrmI AGTACT 3 cut(s) 589, 986, 1190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.