Prupe.7G095900_v2.0.a1

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000131
Physical Location & Seq
Forward (+)
12797621 .. 12800143
2523 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G095900.2

Sequence Viewer

Length: 1413 bp
ATGTTCCAACCAAAACCGGAAAAAGGCACATCAGCTTTTCACGGAGAAATTGGTCATGGTAACATGTTGGATGGCGCTGGCTTCTCCCCTACGGAAGAGGAAGAGGAAGAGGAGACTTCATCAACCAATGCTGCACCAGCAGTAATAGTTGAGAAACCGAGGGATGAAGTGGCGATTCTAATCGAGGGTAAAGTGCGAGACACGCCGTCGTTTTGGCCAGATTGTTGTATTTACAAAGTCCCCCAGAGATTTCGCAGAGGAAATGAAGAGTTCTATGAACCCCGGGTGGTCTCAATCGGACCTTATCACTTTCACCAAGGAAGTTTCCCACAAATGCAAATCTTTAAACTCAAATACTTAGAGGCCTTCTTGAGCCGAAACGAGCTCAGCTTAGACCAATGCCTCGGCCGTGTGAGAACGTGGGAAGCAAAAGCCAGGCGTTTTTATGTAGACCTCATTGACCTAAGCAGTGATGAATTTGCCGAGCTGATGCTGGTGGATGCAATTTTTGTCTTGGAGCTTATGATCAGGCACCAGTTTTTCGAATATGTAGACAATTGCGACCGGATTTATAGAAAGCCGCGGATGATCGAAGATGTTTTCCATGATGTCTTGTTGATTGAGAACCAAATTCCCTTCTTTGTTCTTGAGGGTTTGTATGACCTAGTTGATAATAGCTCCAAAGGAACTCTCAAATTCTTTGTCGAGCTTACGCATGAGTTCTTCAAGGCTTCTGTCAAAATCAACGAGTTTGGTGCTGATCGTGCACCTGTGCCTGGAGTTAACCACGGAGTGAAGCATTTTGTTGATTTTATTCGGTGCTACTACTTGCCTACGGAGGACGAAAAGCATGAATATGGCCATAGGTTTTATGAAATCCCACCAAGCGTGACAGCGCTAGAGGATGCTGGAGTTAAGTTTGCCACAACAAGCACGAGGTCCTTACTTGACATACAATTCAACAGAGGATGTCTCAAAATTCCGAATTTTAGGGTAGACGATTGGACGGAAACTGTCTTCAGGAACCTGATTGCCTTGGAACAGTGCCACGATGATCACCAAGTGAAGTACATTTCAGAATTGATGTTCCTCATGGGGTGCATGATCAAGACTTCAAAAGACGTGGACTTGCTAATTGAACATGAAATTATATCTAGCATGCTGGGGAGCAACGTTGATGTGTCCACTCTGTTTAACCATATTGGCCAAGGGGTTGGTTTGGGTCAGCCATACTATTACTTTAGTCTTTGCAAAAAACTCAATGCCTACTGCAAGACCCCTTGGCACAGATGGAAACCTATTCTGCAGTGCGACTATTTCAACACTCCATGGAAAGTTGTTTCTACAATTGCTGCAATTGTACTCCTTGTGCTCACACTCGTACAAACCATATGCTCTATCTTATCCCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

471

Amino Acids

54.28

Weight (kDa)

5.38

Isoelectric Point (pI)

33.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 531
AccI GTMKAC 3 cut(s) 450, 552, 996
AccII CGCG 1 cut(s) 583
AciI CCGC 2 cut(s) 581, 583
AclI AACGTT 1 cut(s) 1173
AcoI YGGCCR 4 cut(s) 215, 406, 859, 1204
AcsI RAATTY 5 cut(s) 476, 630, 695, 978, 985
AcuI CTGAAG 1 cut(s) 1003
AdeI CACNNNGTG 2 cut(s) 793, 1063
AfaI GTAC 3 cut(s) 1070, 1362, 1383
AfeI AGCGCT 1 cut(s) 897
AfiI CCNNNNNNNGG 2 cut(s) 23, 776
AflIII ACRYGT 1 cut(s) 63
AgsI TTSAA 5 cut(s) 727, 961, 1116, 1139, 1321
AhdI GACNNNNNGTC 1 cut(s) 205
AjiI CACGTC 1 cut(s) 1123
AjnI CCWGG 2 cut(s) 434, 775
AluBI AGCT 7 cut(s) 35, 385, 390, 487, 520, 678, 709
AluI AGCT 7 cut(s) 35, 385, 390, 487, 520, 678, 709
Alw21I GWGCWC 3 cut(s) 387, 769, 1374
Alw26I GTCTC 4 cut(s) 107, 192, 295, 977
Alw44I GTGCAC 1 cut(s) 765
Ama87I CYCGRG 1 cut(s) 282
Aor51HI AGCGCT 1 cut(s) 897
AoxI GGCC 5 cut(s) 215, 363, 406, 859, 1204
ApaLI GTGCAC 1 cut(s) 765
ApeKI GCWGC 2 cut(s) 131, 1352
ApoI RAATTY 5 cut(s) 476, 630, 695, 978, 985
ArsI GACNNNNNNTTYG 2 cut(s) 687, 719
AspLEI GCGC 2 cut(s) 77, 898
AspS9I GGNCC 2 cut(s) 299, 939
AsuC2I CCSGG 2 cut(s) 283, 284
AsuHPI GGTGA 2 cut(s) 305, 1049
AsuII TTCGAA 1 cut(s) 543
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 2 cut(s) 299, 939
BaeGI GKGCMC 1 cut(s) 769
BalI TGGCCA 3 cut(s) 217, 861, 1206
BanI GGYRCC 1 cut(s) 531
BanII GRGCYC 1 cut(s) 387
BauI CACGAG 1 cut(s) 934
BbsI GAAGAC 1 cut(s) 1009
Bbv12I GWGCWC 3 cut(s) 387, 769, 1374
BbvI GCAGC 2 cut(s) 118, 1339
BccI CCATC 2 cut(s) 65, 1284
BceAI ACGGC 2 cut(s) 190, 393
BcgI CGANNNNNNTGC 2 cut(s) 737, 771
BciT130I CCWGG 2 cut(s) 436, 777
BclI TGATCA 3 cut(s) 525, 1054, 1104
BcnI CCSGG 2 cut(s) 283, 284
BcoDI GTCTC 4 cut(s) 107, 192, 295, 977
BfaI CTAG 3 cut(s) 665, 899, 1155
BfmI CTRYAG 2 cut(s) 1304, 1409
BfoI RGCGCY 2 cut(s) 78, 899
BisI GCNGC 3 cut(s) 132, 581, 1353
BlpI GCTNAGC 1 cut(s) 386
BlsI GCNGC 3 cut(s) 133, 582, 1354
Bme1390I CCNGG 4 cut(s) 283, 284, 436, 777
Bme18I GGWCC 2 cut(s) 299, 939
BmeRI GACNNNNNGTC 1 cut(s) 205
BmeT110I CYCGRG 1 cut(s) 282
BmgBI CACGTC 1 cut(s) 1123
BmgT120I GGNCC 2 cut(s) 299, 939
BmiI GGNNCC 2 cut(s) 533, 1025
BmrFI CCNGG 4 cut(s) 283, 284, 436, 777
BmsI GCATC 3 cut(s) 480, 490, 895
BpiI GAAGAC 1 cut(s) 1009
BplI GAGNNNNNCTC 2 cut(s) 957, 989
BpmI CTGGAG 2 cut(s) 798, 930
Bpu10I CCTNAGC 1 cut(s) 464
Bpu1102I GCTNAGC 1 cut(s) 386
Bpu14I TTCGAA 1 cut(s) 543
BpuEI CTTGAG 2 cut(s) 391, 668
BpuMI CCSGG 2 cut(s) 283, 284
BsaBI GATNNNNATC 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 295
BsaWI WCCGGW 2 cut(s) 16, 564
Bsc4I CCNNNNNNNGG 2 cut(s) 23, 776
Bse1I ACTGG 1 cut(s) 535
Bse8I GATNNNNATC 1 cut(s) 179
BseBI CCWGG 2 cut(s) 436, 777
BseGI GGATG 6 cut(s) 76, 169, 505, 591, 910, 974
BseJI GATNNNNATC 1 cut(s) 179
BseLI CCNNNNNNNGG 2 cut(s) 23, 776
BseMII CTCAG 1 cut(s) 400
BseNI ACTGG 1 cut(s) 535
BseRI GAGGAG 1 cut(s) 125
BseSI GKGCMC 1 cut(s) 769
BseX3I CGGCCG 1 cut(s) 406
BseXI GCAGC 2 cut(s) 118, 1339
BseYI CCCAGC 1 cut(s) 1162
BsgI GTGCAG 1 cut(s) 117
Bsh1236I CGCG 1 cut(s) 583
Bsh1285I CGRYCG 2 cut(s) 409, 565
BshFI GGCC 5 cut(s) 217, 365, 408, 861, 1206
BshNI GGYRCC 1 cut(s) 531
BsiEI CGRYCG 2 cut(s) 409, 565
BsiHKAI GWGCWC 3 cut(s) 387, 769, 1374
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 3 cut(s) 17, 283, 565
BslFI GGGAC 1 cut(s) 224
BslI CCNNNNNNNGG 2 cut(s) 23, 776
BsmAI GTCTC 4 cut(s) 107, 192, 295, 977
BsmFI GGGAC 1 cut(s) 224
BsnI GGCC 5 cut(s) 217, 365, 408, 861, 1206
Bso31I GGTCTC 1 cut(s) 295
BsoBI CYCGRG 1 cut(s) 282
Bsp119I TTCGAA 1 cut(s) 543
Bsp1286I GDGCHC 3 cut(s) 387, 769, 1374
Bsp143I GATC 5 cut(s) 525, 588, 760, 1054, 1104
Bsp1720I GCTNAGC 1 cut(s) 386
Bsp19I CCATGG 1 cut(s) 1328
BspACI CCGC 2 cut(s) 581, 583
BspANI GGCC 5 cut(s) 217, 365, 408, 861, 1206
BspCNI CTCAG 1 cut(s) 399
BspFNI CGCG 1 cut(s) 583
BspLI GGNNCC 2 cut(s) 533, 1025
BspMAI CTGCAG 1 cut(s) 1308
BspT104I TTCGAA 1 cut(s) 543
BspT107I GGYRCC 1 cut(s) 531
BspTNI GGTCTC 1 cut(s) 295
BsrI ACTGG 1 cut(s) 535
BssMI GATC 5 cut(s) 525, 588, 760, 1054, 1104
BssSI CACGAG 1 cut(s) 934
BssT1I CCWWGG 5 cut(s) 316, 1035, 1207, 1280, 1328
Bst2BI CACGAG 1 cut(s) 934
Bst2UI CCWGG 2 cut(s) 436, 777
Bst4CI ACNGT 2 cut(s) 1015, 1044
Bst6I CTCTTC 4 cut(s) 90, 96, 102, 261
BstBI TTCGAA 1 cut(s) 543
BstC8I GCNNGC 2 cut(s) 79, 1160
BstDEI CTNAG 4 cut(s) 358, 386, 391, 464
BstDSI CCRYGG 3 cut(s) 581, 787, 1328
BstF5I GGATG 6 cut(s) 76, 169, 505, 591, 910, 974
BstFNI CGCG 1 cut(s) 583
BstH2I RGCGCY 2 cut(s) 78, 899
BstHHI GCGC 2 cut(s) 77, 898
BstKTI GATC 5 cut(s) 528, 591, 763, 1057, 1107
BstMAI GTCTC 4 cut(s) 107, 192, 295, 977
BstMBI GATC 5 cut(s) 525, 588, 760, 1054, 1104
BstMCI CGRYCG 2 cut(s) 409, 565
BstMWI GCNNNNNNNGC 3 cut(s) 137, 202, 764
BstNI CCWGG 2 cut(s) 436, 777
BstNSI RCATGY 2 cut(s) 67, 1162
BstSCI CCNGG 4 cut(s) 281, 282, 434, 775
BstSFI CTRYAG 2 cut(s) 1304, 1409
BstSLI GKGCMC 1 cut(s) 769
BstUI CGCG 1 cut(s) 583
BstV1I GCAGC 2 cut(s) 118, 1339
BstV2I GAAGAC 1 cut(s) 1009
BstXI CCANNNNNNTGG 1 cut(s) 1214
BstZI CGGCCG 1 cut(s) 406
BsuRI GGCC 5 cut(s) 217, 365, 408, 861, 1206
BtgI CCRYGG 3 cut(s) 581, 787, 1328
BtrI CACGTC 1 cut(s) 1123
BtsCI GGATG 6 cut(s) 76, 169, 505, 591, 910, 974
BtsI GCAGTG 2 cut(s) 475, 1313
BtsIMutI CAGTG 3 cut(s) 475, 1049, 1313
Cac8I GCNNGC 2 cut(s) 79, 1160
CfoI GCGC 2 cut(s) 77, 898
Cfr13I GGNCC 2 cut(s) 299, 939
Cfr42I CCGCGG 1 cut(s) 584
Cfr9I CCCGGG 1 cut(s) 282
Csp6I GTAC 3 cut(s) 1069, 1361, 1382
CspCI CAANNNNNGTGG 2 cut(s) 1104, 1139
CviQI GTAC 3 cut(s) 1069, 1361, 1382
DdeI CTNAG 4 cut(s) 358, 386, 391, 464
DpnI GATC 5 cut(s) 527, 590, 762, 1056, 1106
DpnII GATC 5 cut(s) 525, 588, 760, 1054, 1104
DraI TTTAAA 1 cut(s) 346
DraIII CACNNNGTG 2 cut(s) 793, 1063
DriI GACNNNNNGTC 1 cut(s) 205
EaeI YGGCCR 4 cut(s) 215, 406, 859, 1204
EagI CGGCCG 1 cut(s) 406
Eam1104I CTCTTC 4 cut(s) 90, 96, 102, 261
Eam1105I GACNNNNNGTC 1 cut(s) 205
EarI CTCTTC 4 cut(s) 90, 96, 102, 261
Ecl136II GAGCTC 1 cut(s) 385
EclXI CGGCCG 1 cut(s) 406
Eco130I CCWWGG 5 cut(s) 316, 1035, 1207, 1280, 1328
Eco147I AGGCCT 1 cut(s) 365
Eco24I GRGCYC 1 cut(s) 387
Eco31I GGTCTC 1 cut(s) 295
Eco47I GGWCC 2 cut(s) 299, 939
Eco47III AGCGCT 1 cut(s) 897
Eco52I CGGCCG 1 cut(s) 406
Eco53kI GAGCTC 1 cut(s) 385
Eco57I CTGAAG 1 cut(s) 1003
Eco88I CYCGRG 1 cut(s) 282
EcoICRI GAGCTC 1 cut(s) 385
EcoO109I RGGNCCY 1 cut(s) 939
EcoRII CCWGG 2 cut(s) 434, 775
EcoT14I CCWWGG 5 cut(s) 316, 1035, 1207, 1280, 1328
EcoT38I GRGCYC 1 cut(s) 387
ErhI CCWWGG 5 cut(s) 316, 1035, 1207, 1280, 1328
FaqI GGGAC 1 cut(s) 224
FauNDI CATATG 1 cut(s) 1391
FbaI TGATCA 3 cut(s) 525, 1054, 1104
FblI GTMKAC 3 cut(s) 450, 552, 996
Fnu4HI GCNGC 3 cut(s) 132, 581, 1353
FokI GGATG 6 cut(s) 83, 176, 512, 598, 917, 981
FriOI GRGCYC 1 cut(s) 387
Fsp4HI GCNGC 3 cut(s) 132, 581, 1353
FspBI CTAG 3 cut(s) 665, 899, 1155
GlaI GCGC 2 cut(s) 76, 897
GluI GCNGC 3 cut(s) 132, 581, 1353
GsaI CCCAGC 1 cut(s) 1166
GsuI CTGGAG 2 cut(s) 798, 930
HaeII RGCGCY 2 cut(s) 78, 899
HaeIII GGCC 5 cut(s) 217, 365, 408, 861, 1206
HapII CCGG 3 cut(s) 17, 283, 565
HhaI GCGC 2 cut(s) 77, 898
Hin6I GCGC 2 cut(s) 75, 896
HinP1I GCGC 2 cut(s) 75, 896
HincII GTYRAC 1 cut(s) 784
HindII GTYRAC 1 cut(s) 784
HinfI GANTC 1 cut(s) 175
HpaI GTTAAC 1 cut(s) 784
HpaII CCGG 3 cut(s) 17, 283, 565
HphI GGTGA 2 cut(s) 305, 1049
Hpy166II GTNNAC 7 cut(s) 451, 553, 767, 784, 997, 1126, 1185
Hpy188I TCNGA 3 cut(s) 299, 984, 1078
Hpy188III TCNNGA 4 cut(s) 370, 647, 1021, 1108
Hpy8I GTNNAC 7 cut(s) 451, 553, 767, 784, 997, 1126, 1185
Hpy99I CGWCG 1 cut(s) 211
HpyAV CCTTC 2 cut(s) 376, 646
HpyCH4III ACNGT 2 cut(s) 1015, 1044
HpyCH4IV ACGT 3 cut(s) 419, 1122, 1173
HpyCH4V TGCA 9 cut(s) 134, 337, 503, 767, 1101, 1251, 1272, 1306, 1355
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 202, 764
HpyF3I CTNAG 4 cut(s) 358, 386, 391, 464
HpySE526I ACGT 3 cut(s) 419, 1122, 1173
HspAI GCGC 2 cut(s) 75, 896
Ksp22I TGATCA 3 cut(s) 525, 1054, 1104
KspAI GTTAAC 1 cut(s) 784
KspI CCGCGG 1 cut(s) 584
Kzo9I GATC 5 cut(s) 525, 588, 760, 1054, 1104
LmnI GCTCC 3 cut(s) 517, 683, 1167
Lsp1109I GCAGC 2 cut(s) 118, 1339
LweI GCATC 3 cut(s) 480, 490, 895
MaeI CTAG 3 cut(s) 665, 899, 1155
MaeII ACGT 3 cut(s) 419, 1122, 1173
MaeIII GTNAC 2 cut(s) 59, 889
MalI GATC 5 cut(s) 527, 590, 762, 1056, 1106
MboI GATC 5 cut(s) 525, 588, 760, 1054, 1104
MboII GAAGA 7 cut(s) 107, 113, 119, 278, 605, 715, 1009
MfeI CAATTG 3 cut(s) 556, 1347, 1356
MhlI GDGCHC 3 cut(s) 387, 769, 1374
MlsI TGGCCA 3 cut(s) 217, 861, 1206
MluNI TGGCCA 3 cut(s) 217, 861, 1206
MmeI TCCRAC 2 cut(s) 31, 48
Mox20I TGGCCA 3 cut(s) 217, 861, 1206
MscI TGGCCA 3 cut(s) 217, 861, 1206
MseI TTAA 4 cut(s) 345, 783, 915, 1194
MslI CAYNNNNRTG 1 cut(s) 855
Msp20I TGGCCA 3 cut(s) 217, 861, 1206
MspA1I CMGCKG 1 cut(s) 583
MspI CCGG 3 cut(s) 17, 283, 565
MspR9I CCNGG 4 cut(s) 283, 284, 436, 777
MunI CAATTG 3 cut(s) 556, 1347, 1356
MvaI CCWGG 2 cut(s) 436, 777
MvnI CGCG 1 cut(s) 583
MwoI GCNNNNNNNGC 3 cut(s) 137, 202, 764
NciI CCSGG 2 cut(s) 283, 284
NcoI CCATGG 1 cut(s) 1328
NdeI CATATG 1 cut(s) 1391
NdeII GATC 5 cut(s) 525, 588, 760, 1054, 1104
NlaIV GGNNCC 2 cut(s) 533, 1025
NmeAIII GCCGAG 2 cut(s) 384, 508
NmuCI GTSAC 1 cut(s) 889
NspI RCATGY 2 cut(s) 67, 1162
NspV TTCGAA 1 cut(s) 543
PaeI GCATGC 1 cut(s) 1162
PceI AGGCCT 1 cut(s) 365
PciI ACATGT 1 cut(s) 63
PfeI GAWTC 1 cut(s) 175
PkrI GCNGC 3 cut(s) 133, 582, 1354
PpuMI RGGWCCY 1 cut(s) 939
PscI ACATGT 1 cut(s) 63
Psp124BI GAGCTC 1 cut(s) 387
Psp1406I AACGTT 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 939
Psp6I CCWGG 2 cut(s) 434, 775
PspFI CCCAGC 1 cut(s) 1162
PspGI CCWGG 2 cut(s) 434, 775
PspN4I GGNNCC 2 cut(s) 533, 1025
PspPI GGNCC 2 cut(s) 299, 939
PspPPI RGGWCCY 1 cut(s) 939
PstI CTGCAG 1 cut(s) 1308
RsaI GTAC 3 cut(s) 1070, 1362, 1383
RsaNI GTAC 3 cut(s) 1069, 1361, 1382
RseI CAYNNNNRTG 1 cut(s) 855
SacI GAGCTC 1 cut(s) 387
SacII CCGCGG 1 cut(s) 584
SaqAI TTAA 4 cut(s) 345, 783, 915, 1194
SatI GCNGC 3 cut(s) 132, 581, 1353
Sau3AI GATC 5 cut(s) 525, 588, 760, 1054, 1104
Sau96I GGNCC 2 cut(s) 299, 939
ScrFI CCNGG 4 cut(s) 283, 284, 436, 777
SduI GDGCHC 3 cut(s) 387, 769, 1374
SfaNI GCATC 3 cut(s) 480, 490, 895
SfcI CTRYAG 2 cut(s) 1304, 1409
Sfr303I CCGCGG 1 cut(s) 584
SfuI TTCGAA 1 cut(s) 543
SgrBI CCGCGG 1 cut(s) 584
SinI GGWCC 2 cut(s) 299, 939
SmaI CCCGGG 1 cut(s) 284
SmiMI CAYNNNNRTG 1 cut(s) 855
SmlI CTYRAG 2 cut(s) 370, 647
SmoI CTYRAG 2 cut(s) 370, 647
SphI GCATGC 1 cut(s) 1162
SseBI AGGCCT 1 cut(s) 365
SsiI CCGC 2 cut(s) 581, 583
SspMI CTAG 3 cut(s) 665, 899, 1155
SstI GAGCTC 1 cut(s) 387
StuI AGGCCT 1 cut(s) 365
StyD4I CCNGG 4 cut(s) 281, 282, 434, 775
StyI CCWWGG 5 cut(s) 316, 1035, 1207, 1280, 1328
TaaI ACNGT 2 cut(s) 1015, 1044
TaiI ACGT 3 cut(s) 422, 1125, 1176
TaqI TCGA 4 cut(s) 183, 543, 591, 705
TatI WGTACW 2 cut(s) 1068, 1360
TauI GCSGC 1 cut(s) 583
TfiI GAWTC 1 cut(s) 175
Tru1I TTAA 4 cut(s) 345, 783, 915, 1194
Tru9I TTAA 4 cut(s) 345, 783, 915, 1194
TscAI CASTG 3 cut(s) 475, 1049, 1313
TseFI GTSAC 1 cut(s) 889
TseI GCWGC 2 cut(s) 131, 1352
Tsp45I GTSAC 1 cut(s) 889
TspDTI ATGAA 8 cut(s) 108, 180, 279, 291, 489, 867, 888, 1158
TspGWI ACGGA 5 cut(s) 57, 107, 804, 851, 1022
TspMI CCCGGG 1 cut(s) 282
TspRI CASTG 3 cut(s) 475, 1049, 1313
VneI GTGCAC 1 cut(s) 765
VpaK11BI GGWCC 2 cut(s) 299, 939
XapI RAATTY 5 cut(s) 476, 630, 695, 978, 985
XceI RCATGY 2 cut(s) 67, 1162
XmaI CCCGGG 1 cut(s) 282
XmiI GTMKAC 3 cut(s) 450, 552, 996
XspI CTAG 3 cut(s) 665, 899, 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.