RchiOBHm_Chr6g0252301

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000131
Physical Location & Seq
Forward (+)
7464820 .. 7468322
3503 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22621

Sequence Viewer

Length: 1266 bp
ATGGGAGAGCTACAGCCAAAAAATCTGAAACAAAAGTTGGAAAAAGTGTCTCCACTTTCTCCTCGGTGTTGTATCTACAGGGTTCCAAAGAGACTACGTAACCAGAATGAGAAGGCATACACACCTCAAGTGGTCTCAATAGGCCCGCTTCACCATGGTGGAAAAGACCTAGAAGCCATGGAAGATCACAAAATACGGTATGTGAAGGACTTCCTAGAACGGACCAAGGTAAGCATGGAGGAATGTTTCAATGCCTTGAAGGAGTGGGAGACAGAAATCCGTGCTTGTTATGCAGTAAAAATTGAATACGAAGAAACTGAGCTTGTGGAAATGGTTCTTGTAGATTCCATTTTCATCTTTGAGCTCCTGCTGAGGTTTCCTTACCCAGCACTGCAAAAGGAAAAGGTTGACCGTGTATTCGGAAAACCATGGATGCAAAGGGACATAACATATGACTTGTTATTGCTTGAAAATCAGATCCCATTTTTCATTCTTGAGTATCTTTATTCCTTAGCCCTTACCCGTAATACTATTCCTCTGGAAGCTAATGGGGTGCTTTCTCTCTTTGAGCTTACCCACCGATTTTTGGGGAAGAGCGTATACATATGGCCATATGCAGAAATGAAGAAGAAACTCGAGCATAAACAAATACAACATTTTGTTGATTTTGTCCTCACATGTCATCGACCTTTACCTTCTGAGCTTCCCAATGCGAAGAAACTCACGACTTTAACCATACCAAATGCAACAGAATTATACCAGTCCGGAGTCAAGTTTGTGAAGGTCGATGACAAAAACATATTTGACATAAAATTTAAGAATGGGGTCCTGAAAATTCCACACTTGAGAATCCGCGGGTCAACAGAAATTTTCTTTCGGAATCTCATTGCCTACGAGCAGTGTGAGTTCCATGATCACTACTTCCACGATTATGTGTTCATCATGGATGGCCTGGTTGACAGTTCTAAGGATGTGGACTTGCTTGTTAAGGCGGGAATCCTTGACTCTAAGCTACCGGATAGTGAAGCAACAGCAAGTTTTATCAGTTCCCTTGACTCGGGGCCTATTCTGTTCAGTAAAAAATCCTATGTTACTGATCTCTGTGACGCTCTGAATGCATACTATAGAGTCCCCCAGCACAAGTGGAAGGCAAGCTTGAAACAGGACTACTTTAGTACTCCATGGGCTGGACTGTCTATTGTTGTAGCGGCTATTCTCGTTGTGCTCACTTTTATTCAAACAGTGTGCTCTATAATGTCTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

421

Amino Acids

48.81

Weight (kDa)

7.17

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 25 - 409 2.1e-113 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1187
AccI GTMKAC 1 cut(s) 600
AccII CGCG 1 cut(s) 855
AccIII TCCGGA 1 cut(s) 764
AciI CCGC 5 cut(s) 146, 853, 855, 992, 1208
AclWI GGATC 1 cut(s) 472
AcoI YGGCCR 1 cut(s) 608
AcsI RAATTY 3 cut(s) 812, 834, 867
AfaI GTAC 1 cut(s) 1177
AfiI CCNNNNNNNGG 3 cut(s) 586, 1057, 1187
AflIII ACRYGT 1 cut(s) 677
AgsI TTSAA 6 cut(s) 250, 259, 305, 470, 1159, 1238
AjnI CCWGG 1 cut(s) 951
AjuI GAANNNNNNNTTGG 2 cut(s) 20, 52
AleI CACNNNNGTG 1 cut(s) 156
AluBI AGCT 8 cut(s) 10, 322, 364, 545, 571, 703, 1012, 1155
AluI AGCT 8 cut(s) 10, 322, 364, 545, 571, 703, 1012, 1155
Alw21I GWGCWC 3 cut(s) 366, 1227, 1250
Alw26I GTCTC 4 cut(s) 54, 85, 139, 263
AlwI GGATC 1 cut(s) 472
Ama87I CYCGRG 2 cut(s) 635, 1057
Aor13HI TCCGGA 1 cut(s) 764
AoxI GGCC 4 cut(s) 142, 608, 949, 1061
ApoI RAATTY 3 cut(s) 812, 834, 867
ArsI GACNNNNNNTTYG 2 cut(s) 401, 433
Asp700I GAANNNNTTC 2 cut(s) 209, 333
AspS9I GGNCC 4 cut(s) 143, 222, 826, 1061
AsuHPI GGTGA 1 cut(s) 143
AvaI CYCGRG 2 cut(s) 635, 1057
AvaII GGWCC 2 cut(s) 222, 826
BalI TGGCCA 1 cut(s) 610
BanII GRGCYC 1 cut(s) 366
BarI GAAGNNNNNNTAC 2 cut(s) 584, 616
Bbv12I GWGCWC 3 cut(s) 366, 1227, 1250
BbvCI CCTCAGC 1 cut(s) 371
BccI CCATC 1 cut(s) 941
BciT130I CCWGG 1 cut(s) 953
BclI TGATCA 1 cut(s) 913
BcoDI GTCTC 4 cut(s) 54, 85, 139, 263
BfaI CTAG 2 cut(s) 170, 215
BfmI CTRYAG 3 cut(s) 11, 76, 1123
BisI GCNGC 1 cut(s) 1209
BlsI GCNGC 1 cut(s) 1210
BmcAI AGTACT 1 cut(s) 1177
Bme1390I CCNGG 1 cut(s) 953
Bme18I GGWCC 2 cut(s) 222, 826
BmeT110I CYCGRG 2 cut(s) 635, 1057
BmgT120I GGNCC 4 cut(s) 143, 222, 826, 1061
BmiI GGNNCC 3 cut(s) 84, 827, 1062
BmrFI CCNGG 1 cut(s) 953
BmsI GCATC 1 cut(s) 423
Bpu10I CCTNAGC 2 cut(s) 371, 511
BpuEI CTTGAG 3 cut(s) 111, 515, 865
BsaAI YACGTR 1 cut(s) 98
BsaI GGTCTC 1 cut(s) 139
BsaJI CCNNGG 7 cut(s) 62, 154, 177, 225, 428, 853, 1181
BsaWI WCCGGW 2 cut(s) 764, 1015
Bsc4I CCNNNNNNNGG 3 cut(s) 586, 1057, 1187
Bse1I ACTGG 1 cut(s) 760
Bse3DI GCAATG 1 cut(s) 885
BseAI TCCGGA 1 cut(s) 764
BseBI CCWGG 1 cut(s) 953
BseDI CCNNGG 7 cut(s) 62, 154, 177, 225, 428, 853, 1181
BseGI GGATG 3 cut(s) 438, 952, 976
BseLI CCNNNNNNNGG 3 cut(s) 586, 1057, 1187
BseMI GCAATG 1 cut(s) 885
BseMII CTCAG 3 cut(s) 309, 362, 690
BseNI ACTGG 1 cut(s) 760
BseRI GAGGAG 1 cut(s) 51
BseYI CCCAGC 2 cut(s) 385, 1134
Bsh1236I CGCG 1 cut(s) 855
BshFI GGCC 4 cut(s) 144, 610, 951, 1063
BsiHKAI GWGCWC 3 cut(s) 366, 1227, 1250
BsiHKCI CYCGRG 2 cut(s) 635, 1057
BsiSI CCGG 2 cut(s) 765, 1016
BslFI GGGAC 2 cut(s) 455, 1115
BslI CCNNNNNNNGG 3 cut(s) 586, 1057, 1187
BsmAI GTCTC 4 cut(s) 54, 85, 139, 263
BsmFI GGGAC 2 cut(s) 455, 1115
BsmI GAATGC 1 cut(s) 1120
BsnI GGCC 4 cut(s) 144, 610, 951, 1063
Bso31I GGTCTC 1 cut(s) 139
BsoBI CYCGRG 2 cut(s) 635, 1057
Bsp1286I GDGCHC 3 cut(s) 366, 1227, 1250
Bsp13I TCCGGA 1 cut(s) 764
Bsp143I GATC 4 cut(s) 184, 477, 913, 1096
Bsp19I CCATGG 4 cut(s) 154, 177, 428, 1181
BspACI CCGC 5 cut(s) 146, 853, 855, 992, 1208
BspANI GGCC 4 cut(s) 144, 610, 951, 1063
BspCNI CTCAG 3 cut(s) 310, 363, 691
BspEI TCCGGA 1 cut(s) 764
BspFNI CGCG 1 cut(s) 855
BspLI GGNNCC 3 cut(s) 84, 827, 1062
BspPI GGATC 1 cut(s) 472
BspQI GCTCTTC 1 cut(s) 587
BspTNI GGTCTC 1 cut(s) 139
BsrDI GCAATG 1 cut(s) 885
BsrI ACTGG 1 cut(s) 760
BssECI CCNNGG 7 cut(s) 62, 154, 177, 225, 428, 853, 1181
BssMI GATC 4 cut(s) 184, 477, 913, 1096
BssNAI GTATAC 1 cut(s) 601
BssT1I CCWWGG 5 cut(s) 154, 177, 225, 428, 1181
Bst1107I GTATAC 1 cut(s) 601
Bst2UI CCWGG 1 cut(s) 953
Bst4CI ACNGT 5 cut(s) 198, 413, 962, 1194, 1243
Bst6I CTCTTC 1 cut(s) 587
BstBAI YACGTR 1 cut(s) 98
BstC8I GCNNGC 2 cut(s) 146, 1153
BstDEI CTNAG 6 cut(s) 318, 371, 511, 699, 966, 1008
BstDSI CCRYGG 5 cut(s) 154, 177, 428, 853, 1181
BstF5I GGATG 3 cut(s) 438, 952, 976
BstFNI CGCG 1 cut(s) 855
BstKTI GATC 4 cut(s) 187, 480, 916, 1099
BstMAI GTCTC 4 cut(s) 54, 85, 139, 263
BstMBI GATC 4 cut(s) 184, 477, 913, 1096
BstMWI GCNNNNNNNGC 2 cut(s) 290, 1115
BstNI CCWGG 1 cut(s) 953
BstNSI RCATGY 1 cut(s) 681
BstSCI CCNGG 1 cut(s) 951
BstSFI CTRYAG 3 cut(s) 11, 76, 1123
BstSNI TACGTA 1 cut(s) 98
BstUI CGCG 1 cut(s) 855
BstX2I RGATCY 1 cut(s) 477
BstYI RGATCY 1 cut(s) 477
BstZ17I GTATAC 1 cut(s) 601
BsuRI GGCC 4 cut(s) 144, 610, 951, 1063
BtgI CCRYGG 5 cut(s) 154, 177, 428, 853, 1181
BtsCI GGATG 3 cut(s) 438, 952, 976
BtsI GCAGTG 2 cut(s) 389, 905
BtsIMutI CAGTG 3 cut(s) 389, 905, 1248
Cac8I GCNNGC 2 cut(s) 146, 1153
Cfr13I GGNCC 4 cut(s) 143, 222, 826, 1061
Cfr42I CCGCGG 1 cut(s) 856
CseI GACGC 1 cut(s) 1115
Csp6I GTAC 1 cut(s) 1176
CviAII CATG 8 cut(s) 155, 178, 235, 429, 678, 911, 943, 1182
CviQI GTAC 1 cut(s) 1176
DdeI CTNAG 6 cut(s) 318, 371, 511, 699, 966, 1008
DpnI GATC 4 cut(s) 186, 479, 915, 1098
DpnII GATC 4 cut(s) 184, 477, 913, 1096
EaeI YGGCCR 1 cut(s) 608
Eam1104I CTCTTC 1 cut(s) 587
EarI CTCTTC 1 cut(s) 587
Ecl136II GAGCTC 1 cut(s) 364
Eco105I TACGTA 1 cut(s) 98
Eco130I CCWWGG 5 cut(s) 154, 177, 225, 428, 1181
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 1 cut(s) 139
Eco47I GGWCC 2 cut(s) 222, 826
Eco53kI GAGCTC 1 cut(s) 364
Eco88I CYCGRG 2 cut(s) 635, 1057
EcoICRI GAGCTC 1 cut(s) 364
EcoO109I RGGNCCY 2 cut(s) 826, 1061
EcoRII CCWGG 1 cut(s) 951
EcoT14I CCWWGG 5 cut(s) 154, 177, 225, 428, 1181
EcoT22I ATGCAT 1 cut(s) 1120
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 5 cut(s) 154, 177, 225, 428, 1181
FaeI CATG 8 cut(s) 158, 181, 238, 432, 681, 914, 946, 1185
FalI AAGNNNNNCTT 2 cut(s) 1139, 1171
FaqI GGGAC 2 cut(s) 455, 1115
FatI CATG 8 cut(s) 154, 177, 234, 428, 677, 910, 942, 1181
FauI CCCGC 3 cut(s) 153, 848, 985
FauNDI CATATG 3 cut(s) 451, 605, 613
FbaI TGATCA 1 cut(s) 913
FblI GTMKAC 1 cut(s) 600
Fnu4HI GCNGC 1 cut(s) 1209
FokI GGATG 3 cut(s) 445, 959, 983
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 1 cut(s) 1209
FspBI CTAG 2 cut(s) 170, 215
GluI GCNGC 1 cut(s) 1209
GsaI CCCAGC 2 cut(s) 389, 1138
HaeIII GGCC 4 cut(s) 144, 610, 951, 1063
HapII CCGG 2 cut(s) 765, 1016
HgaI GACGC 1 cut(s) 1115
Hin1II CATG 8 cut(s) 158, 181, 238, 432, 681, 914, 946, 1185
HincII GTYRAC 3 cut(s) 409, 861, 958
HindII GTYRAC 3 cut(s) 409, 861, 958
HindIII AAGCTT 1 cut(s) 1153
HinfI GANTC 8 cut(s) 344, 768, 849, 880, 996, 1004, 1055, 1128
HpaII CCGG 2 cut(s) 765, 1016
HphI GGTGA 1 cut(s) 143
Hpy166II GTNNAC 5 cut(s) 409, 601, 861, 958, 976
Hpy188I TCNGA 6 cut(s) 27, 422, 477, 700, 879, 1113
Hpy188III TCNNGA 5 cut(s) 494, 539, 724, 765, 829
Hpy8I GTNNAC 5 cut(s) 409, 601, 861, 958, 976
HpyAV CCTTC 6 cut(s) 106, 199, 253, 705, 775, 1141
HpyCH4III ACNGT 5 cut(s) 198, 413, 962, 1194, 1243
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 6 cut(s) 293, 394, 436, 617, 746, 1118
HpyF10VI GCNNNNNNNGC 2 cut(s) 290, 1115
HpyF3I CTNAG 6 cut(s) 318, 371, 511, 699, 966, 1008
HpySE526I ACGT 1 cut(s) 97
Hsp92II CATG 8 cut(s) 158, 181, 238, 432, 681, 914, 946, 1185
Kpn2I TCCGGA 1 cut(s) 764
Ksp22I TGATCA 1 cut(s) 913
KspI CCGCGG 1 cut(s) 856
Kzo9I GATC 4 cut(s) 184, 477, 913, 1096
LguI GCTCTTC 1 cut(s) 587
LmnI GCTCC 1 cut(s) 369
LweI GCATC 1 cut(s) 423
MaeI CTAG 2 cut(s) 170, 215
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 3 cut(s) 98, 1090, 1103
MalI GATC 4 cut(s) 186, 479, 915, 1098
MboI GATC 4 cut(s) 184, 477, 913, 1096
MboII GAAGA 6 cut(s) 194, 323, 604, 637, 640, 727
MflI RGATCY 1 cut(s) 477
MhlI GDGCHC 3 cut(s) 366, 1227, 1250
MlsI TGGCCA 1 cut(s) 610
MluCI AATT 5 cut(s) 300, 752, 812, 834, 867
MluNI TGGCCA 1 cut(s) 610
MlyI GAGTC 4 cut(s) 777, 998, 1049, 1137
MmeI TCCRAC 1 cut(s) 18
MnlI CCTC 6 cut(s) 72, 135, 232, 366, 546, 683
Mox20I TGGCCA 1 cut(s) 610
Mph1103I ATGCAT 1 cut(s) 1120
MroI TCCGGA 1 cut(s) 764
MroXI GAANNNNTTC 2 cut(s) 209, 333
MscI TGGCCA 1 cut(s) 610
MseI TTAA 3 cut(s) 731, 816, 987
MslI CAYNNNNRTG 2 cut(s) 156, 930
Msp20I TGGCCA 1 cut(s) 610
MspA1I CMGCKG 1 cut(s) 855
MspI CCGG 2 cut(s) 765, 1016
MspR9I CCNGG 1 cut(s) 953
Mva1269I GAATGC 1 cut(s) 1120
MvaI CCWGG 1 cut(s) 953
MvnI CGCG 1 cut(s) 855
MwoI GCNNNNNNNGC 2 cut(s) 290, 1115
NcoI CCATGG 4 cut(s) 154, 177, 428, 1181
NdeI CATATG 3 cut(s) 451, 605, 613
NdeII GATC 4 cut(s) 184, 477, 913, 1096
NlaIII CATG 8 cut(s) 158, 181, 238, 432, 681, 914, 946, 1185
NlaIV GGNNCC 3 cut(s) 84, 827, 1062
NmuCI GTSAC 1 cut(s) 1103
NsiI ATGCAT 1 cut(s) 1120
NspI RCATGY 1 cut(s) 681
OliI CACNNNNGTG 1 cut(s) 156
PaeR7I CTCGAG 1 cut(s) 635
PciI ACATGT 1 cut(s) 677
PciSI GCTCTTC 1 cut(s) 587
PctI GAATGC 1 cut(s) 1120
PdmI GAANNNNTTC 2 cut(s) 209, 333
PfeI GAWTC 4 cut(s) 344, 849, 880, 996
PflMI CCANNNNNTGG 1 cut(s) 1187
PkrI GCNGC 1 cut(s) 1210
PleI GAGTC 4 cut(s) 776, 998, 1049, 1136
PpsI GAGTC 4 cut(s) 776, 998, 1049, 1136
Ppu21I YACGTR 1 cut(s) 98
PpuMI RGGWCCY 1 cut(s) 826
PscI ACATGT 1 cut(s) 677
Psp124BI GAGCTC 1 cut(s) 366
Psp5II RGGWCCY 1 cut(s) 826
Psp6I CCWGG 1 cut(s) 951
PspFI CCCAGC 2 cut(s) 385, 1134
PspGI CCWGG 1 cut(s) 951
PspN4I GGNNCC 3 cut(s) 84, 827, 1062
PspPI GGNCC 4 cut(s) 143, 222, 826, 1061
PspPPI RGGWCCY 1 cut(s) 826
PspXI VCTCGAGB 1 cut(s) 635
PsuI RGATCY 1 cut(s) 477
RsaI GTAC 1 cut(s) 1177
RsaNI GTAC 1 cut(s) 1176
RseI CAYNNNNRTG 2 cut(s) 156, 930
SacI GAGCTC 1 cut(s) 366
SacII CCGCGG 1 cut(s) 856
SapI GCTCTTC 1 cut(s) 587
SaqAI TTAA 3 cut(s) 731, 816, 987
SatI GCNGC 1 cut(s) 1209
Sau3AI GATC 4 cut(s) 184, 477, 913, 1096
Sau96I GGNCC 4 cut(s) 143, 222, 826, 1061
ScaI AGTACT 1 cut(s) 1177
SchI GAGTC 4 cut(s) 777, 998, 1049, 1137
ScrFI CCNGG 1 cut(s) 953
SduI GDGCHC 3 cut(s) 366, 1227, 1250
SfaNI GCATC 1 cut(s) 423
SfcI CTRYAG 3 cut(s) 11, 76, 1123
Sfr274I CTCGAG 1 cut(s) 635
Sfr303I CCGCGG 1 cut(s) 856
SgrBI CCGCGG 1 cut(s) 856
SinI GGWCC 2 cut(s) 222, 826
SlaI CTCGAG 1 cut(s) 635
SmiMI CAYNNNNRTG 2 cut(s) 156, 930
SmlI CTYRAG 4 cut(s) 126, 494, 635, 844
SmoI CTYRAG 4 cut(s) 126, 494, 635, 844
SnaBI TACGTA 1 cut(s) 98
Sse9I AATT 5 cut(s) 300, 752, 812, 834, 867
SsiI CCGC 5 cut(s) 146, 853, 855, 992, 1208
SspMI CTAG 2 cut(s) 170, 215
SstI GAGCTC 1 cut(s) 366
StyD4I CCNGG 1 cut(s) 951
StyI CCWWGG 5 cut(s) 154, 177, 225, 428, 1181
TaaI ACNGT 5 cut(s) 198, 413, 962, 1194, 1243
TaiI ACGT 1 cut(s) 100
TaqI TCGA 3 cut(s) 636, 685, 786
TasI AATT 5 cut(s) 300, 752, 812, 834, 867
TatI WGTACW 1 cut(s) 1175
TauI GCSGC 1 cut(s) 1211
TfiI GAWTC 4 cut(s) 344, 849, 880, 996
Tru1I TTAA 3 cut(s) 731, 816, 987
Tru9I TTAA 3 cut(s) 731, 816, 987
TscAI CASTG 3 cut(s) 396, 905, 1248
TseFI GTSAC 1 cut(s) 1103
Tsp45I GTSAC 1 cut(s) 1103
TspDTI ATGAA 4 cut(s) 343, 478, 638, 928
TspGWI ACGGA 2 cut(s) 235, 269
TspRI CASTG 3 cut(s) 396, 905, 1248
Van91I CCANNNNNTGG 1 cut(s) 1187
VpaK11BI GGWCC 2 cut(s) 222, 826
XapI RAATTY 3 cut(s) 812, 834, 867
XceI RCATGY 1 cut(s) 681
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XhoI CTCGAG 1 cut(s) 635
XmiI GTMKAC 1 cut(s) 600
XmnI GAANNNNTTC 2 cut(s) 209, 333
XspI CTAG 2 cut(s) 170, 215
ZrmI AGTACT 1 cut(s) 1177
Zsp2I ATGCAT 1 cut(s) 1120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.