Rw4G013140

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000131
Physical Location & Seq
Reverse (-)
30779260 .. 30782215
2956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G013140.1

Sequence Viewer

Length: 1374 bp
ATGGCCCATTATACGTCATCGACCATGCAATCACAACGATACATCAGGAGGGAAATGGAAGGAAGTGTTGAAGCTGGACCACATGACATAGAAAACCCGTACGTTGTATTAGAAAATTCATTGATAGAGGAGGTGGGTAGATTGTCCCCCATATCCAATTCGCGTTGTATATACCGGGTTCCTAATCGACTACGGCATGTATCTGAAGACGTCTACACACCTAGGGTAATCTCTATAGGCCCACTGCATCACGGAAGGGAAGCCTTGAAAGCCATGGAAGAACACAAAAAGAGGTACTTACAATATGTTATGGGTCGAAGCAAATTCAGCCTGATGGATTATATAGAAAAAATAAAGGATAGAGAACCAAAATTGCGTAGTTGTTACTCAGAAACCATTGATCTTAAAAGTGATGAATTAGTAAGAATCATTCTAGTGGATGCCATCTTCGTCATTGAGTTCTTATATAGATACTGGTGCCGTGCATTGCTAGATGAAAATGACTGCATATTTGGGAAACCAATGTGGGTAAATGATGTTTGGCCTGACCTGGTACGGCTTGAAAATCAGCTTCCATTCTTCATTCTTGAGGACCTATTCGACCCAGACATATTTCCGGTCCCTCTAGAGTACTCTAACAGGCTTATTGGTGTTGAGAGGCTCTCAATATTGTTTCTTTCTTACCATTTTGTAAATGATATCGCGAAAGATATAGGGGGGGTGCTGGATAATGTGGAGATGGTTTATTCTTCCGAAGAGATAGACCATTTTGTTGATCTCTTAAGAAAGTTATATATAGCCCCTATCAATAGAGAGTCTGTAGAAACGAAAATTTATACAGTACCTACCATTGAAGAGCTAAACCGGGCGGGAGTGAAATTTAAGGCAGGACTAACCAAGAATTTATTTGACATACAGTTTGATGATGGAATTCTGGAAATTCCAAAATTCGTAGCACATGATGCTACAGAGTTTGTACTAAAAAATCTAGTTGCTTTTGAGCAATGCACTGGCTTAGGAAATTACCTATCTGATTATGTCATTCTTATGGATCAGCTTGTGGACACCTCAAAAGATGCGGAGTTGCTCGTTAAGTATAAAATCATTGTAAACATGCTAGGAGGTGGGAATAATGAGTTGTCAGATATGATTAACCGCCTGTCAAATGGGGTTAGCCAACAAAATGAATTCTATTTTGGTACTCTTTTTGTAGACTTGAACAAGTTCTGCAGTTCAACATGGCACAAAAGGATGGCAAATTTGAGACAAAATTATTTCAACACCCCTTGGGCAACCATTTCATTTTTTGCAGCAGTCCTTCTCCTGATACTGACTATGATTCAAACAATTTGCTCGATAATCTCTCTTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

457

Amino Acids

52.93

Weight (kDa)

5.24

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 57 - 444 2.3e-107 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 213
AccB1I GGYRCC 1 cut(s) 477
AccI GTMKAC 2 cut(s) 213, 1212
AccII CGCG 2 cut(s) 163, 704
AciI CCGC 3 cut(s) 869, 1079, 1156
AclWI GGATC 1 cut(s) 1059
AcuI CTGAAG 1 cut(s) 225
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 7 cut(s) 101, 296, 555, 632, 843, 978, 1201
AflII CTTAAG 1 cut(s) 781
AgsI TTSAA 8 cut(s) 71, 268, 563, 854, 1219, 1236, 1279, 1343
AjnI CCWGG 1 cut(s) 549
AjuI GAANNNNNNNTTGG 2 cut(s) 1179, 1211
AluBI AGCT 4 cut(s) 74, 571, 859, 1057
AluI AGCT 4 cut(s) 74, 571, 859, 1057
Alw26I GTCTC 1 cut(s) 1258
AlwI GGATC 1 cut(s) 1059
AoxI GGCC 3 cut(s) 3, 238, 542
ApeKI GCWGC 1 cut(s) 1310
ArsI GACNNNNNNTTYG 4 cut(s) 494, 526, 902, 934
Asp700I GAANNNNTTC 1 cut(s) 1223
AspA2I CCTAGG 1 cut(s) 221
AspS9I GGNCC 5 cut(s) 4, 77, 239, 592, 619
AsuC2I CCSGG 2 cut(s) 176, 866
AvaII GGWCC 3 cut(s) 77, 592, 619
AvrII CCTAGG 1 cut(s) 221
BanI GGYRCC 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 213
BbvI GCAGC 1 cut(s) 1322
BccI CCATC 5 cut(s) 328, 452, 733, 920, 1246
BceAI ACGGC 3 cut(s) 209, 465, 572
BciT130I CCWGG 1 cut(s) 551
BcnI CCSGG 2 cut(s) 176, 866
BcoDI GTCTC 1 cut(s) 1258
BfaI CTAG 6 cut(s) 222, 434, 491, 626, 989, 1118
BfmI CTRYAG 4 cut(s) 234, 819, 966, 1228
BfrI CTTAAG 1 cut(s) 781
BisI GCNGC 1 cut(s) 1311
BlnI CCTAGG 1 cut(s) 221
BlsI GCNGC 1 cut(s) 1312
BmcAI AGTACT 1 cut(s) 632
Bme1390I CCNGG 3 cut(s) 176, 551, 866
Bme18I GGWCC 3 cut(s) 77, 592, 619
BmgT120I GGNCC 5 cut(s) 4, 77, 239, 592, 619
BmiI GGNNCC 3 cut(s) 180, 479, 621
BmrFI CCNGG 3 cut(s) 176, 551, 866
BmsI GCATC 4 cut(s) 256, 430, 952, 1066
BpiI GAAGAC 1 cut(s) 213
BplI GAGNNNNNCTC 2 cut(s) 647, 679
Bpu10I CCTNAGC 1 cut(s) 1015
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 2 cut(s) 176, 866
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 3 cut(s) 221, 273, 1286
BsaWI WCCGGW 1 cut(s) 616
Bse1I ACTGG 2 cut(s) 479, 1015
Bse3DI GCAATG 2 cut(s) 485, 1010
BseBI CCWGG 1 cut(s) 551
BseDI CCNNGG 3 cut(s) 221, 273, 1286
BseGI GGATG 2 cut(s) 445, 1257
BseMI GCAATG 2 cut(s) 485, 1010
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 2 cut(s) 479, 1015
BseRI GAGGAG 1 cut(s) 143
BseXI GCAGC 1 cut(s) 1322
Bsh1236I CGCG 2 cut(s) 163, 704
BshFI GGCC 3 cut(s) 5, 240, 544
BshNI GGYRCC 1 cut(s) 477
BsiSI CCGG 3 cut(s) 175, 617, 865
BsiWI CGTACG 1 cut(s) 99
BslFI GGGAC 2 cut(s) 130, 605
BsmAI GTCTC 1 cut(s) 1258
BsmFI GGGAC 2 cut(s) 130, 605
BsnI GGCC 3 cut(s) 5, 240, 544
Bsp143I GATC 3 cut(s) 400, 775, 1051
Bsp19I CCATGG 1 cut(s) 273
Bsp68I TCGCGA 1 cut(s) 704
BspACI CCGC 3 cut(s) 869, 1079, 1156
BspANI GGCC 3 cut(s) 5, 240, 544
BspCNI CTCAG 1 cut(s) 401
BspFNI CGCG 2 cut(s) 163, 704
BspLI GGNNCC 3 cut(s) 180, 479, 621
BspMAI CTGCAG 1 cut(s) 1232
BspPI GGATC 1 cut(s) 1059
BspQI GCTCTTC 1 cut(s) 849
BspT107I GGYRCC 1 cut(s) 477
BspTI CTTAAG 1 cut(s) 781
BsrDI GCAATG 2 cut(s) 485, 1010
BsrI ACTGG 2 cut(s) 479, 1015
BssECI CCNNGG 3 cut(s) 221, 273, 1286
BssMI GATC 3 cut(s) 400, 775, 1051
BssNI GRCGYC 1 cut(s) 210
BssT1I CCWWGG 3 cut(s) 221, 273, 1286
Bst2UI CCWGG 1 cut(s) 551
Bst4CI ACNGT 2 cut(s) 841, 918
Bst6I CTCTTC 2 cut(s) 750, 849
BstACI GRCGYC 1 cut(s) 210
BstAFI CTTAAG 1 cut(s) 781
BstAPI GCANNNNNTGC 1 cut(s) 962
BstDEI CTNAG 2 cut(s) 388, 1015
BstDSI CCRYGG 1 cut(s) 273
BstF5I GGATG 2 cut(s) 445, 1257
BstFNI CGCG 2 cut(s) 163, 704
BstKTI GATC 3 cut(s) 403, 778, 1054
BstMAI GTCTC 1 cut(s) 1258
BstMBI GATC 3 cut(s) 400, 775, 1051
BstMWI GCNNNNNNNGC 3 cut(s) 269, 327, 962
BstNI CCWGG 1 cut(s) 551
BstNSI RCATGY 2 cut(s) 200, 1117
BstSCI CCNGG 3 cut(s) 174, 549, 864
BstSFI CTRYAG 4 cut(s) 234, 819, 966, 1228
BstUI CGCG 2 cut(s) 163, 704
BstV1I GCAGC 1 cut(s) 1322
BstV2I GAAGAC 1 cut(s) 213
BsuRI GGCC 3 cut(s) 5, 240, 544
BtgI CCRYGG 1 cut(s) 273
BtsCI GGATG 2 cut(s) 445, 1257
BtsI GCAGTG 1 cut(s) 242
BtsIMutI CAGTG 2 cut(s) 242, 1008
BtuMI TCGCGA 1 cut(s) 704
Cfr13I GGNCC 5 cut(s) 4, 77, 239, 592, 619
CsiI ACCWGGT 1 cut(s) 549
Csp6I GTAC 7 cut(s) 100, 295, 554, 631, 842, 977, 1200
CviAII CATG 7 cut(s) 25, 83, 197, 274, 959, 1114, 1239
CviQI GTAC 7 cut(s) 100, 295, 554, 631, 842, 977, 1200
DdeI CTNAG 2 cut(s) 388, 1015
DpnI GATC 3 cut(s) 402, 777, 1053
DpnII GATC 3 cut(s) 400, 775, 1051
Eam1104I CTCTTC 2 cut(s) 750, 849
EarI CTCTTC 2 cut(s) 750, 849
Eco130I CCWWGG 3 cut(s) 221, 273, 1286
Eco32I GATATC 1 cut(s) 700
Eco47I GGWCC 3 cut(s) 77, 592, 619
Eco57I CTGAAG 1 cut(s) 225
EcoO109I RGGNCCY 1 cut(s) 592
EcoRI GAATTC 2 cut(s) 930, 1187
EcoRII CCWGG 1 cut(s) 549
EcoRV GATATC 1 cut(s) 700
EcoT14I CCWWGG 3 cut(s) 221, 273, 1286
ErhI CCWWGG 3 cut(s) 221, 273, 1286
FaeI CATG 7 cut(s) 28, 86, 200, 277, 962, 1117, 1242
FalI AAGNNNNNCTT 2 cut(s) 281, 313
FaqI GGGAC 2 cut(s) 130, 605
FatI CATG 7 cut(s) 24, 82, 196, 273, 958, 1113, 1238
FauI CCCGC 1 cut(s) 862
FblI GTMKAC 2 cut(s) 213, 1212
Fnu4HI GCNGC 1 cut(s) 1311
FokI GGATG 2 cut(s) 452, 1264
Fsp4HI GCNGC 1 cut(s) 1311
FspBI CTAG 6 cut(s) 222, 434, 491, 626, 989, 1118
GluI GCNGC 1 cut(s) 1311
HaeIII GGCC 3 cut(s) 5, 240, 544
HapII CCGG 3 cut(s) 175, 617, 865
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 7 cut(s) 28, 86, 200, 277, 962, 1117, 1242
HinfI GANTC 3 cut(s) 426, 815, 1339
HpaII CCGG 3 cut(s) 175, 617, 865
Hpy166II GTNNAC 4 cut(s) 214, 1063, 1111, 1213
Hpy188I TCNGA 5 cut(s) 205, 391, 754, 1033, 1144
Hpy188III TCNNGA 6 cut(s) 46, 587, 626, 703, 935, 1324
Hpy8I GTNNAC 4 cut(s) 214, 1063, 1111, 1213
HpyAV CCTTC 3 cut(s) 53, 249, 1328
HpyCH4III ACNGT 2 cut(s) 841, 918
HpyCH4IV ACGT 3 cut(s) 14, 102, 210
HpyCH4V TGCA 7 cut(s) 28, 247, 485, 507, 1008, 1230, 1310
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 327, 962
HpyF3I CTNAG 2 cut(s) 388, 1015
HpySE526I ACGT 3 cut(s) 14, 102, 210
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 7 cut(s) 28, 86, 200, 277, 962, 1117, 1242
Kzo9I GATC 3 cut(s) 400, 775, 1051
LguI GCTCTTC 1 cut(s) 849
Lsp1109I GCAGC 1 cut(s) 1322
LweI GCATC 4 cut(s) 256, 430, 952, 1066
MabI ACCWGGT 1 cut(s) 549
MaeI CTAG 6 cut(s) 222, 434, 491, 626, 989, 1118
MaeII ACGT 3 cut(s) 14, 102, 210
MaeIII GTNAC 1 cut(s) 383
MalI GATC 3 cut(s) 402, 777, 1053
MboI GATC 3 cut(s) 400, 775, 1051
MboII GAAGA 7 cut(s) 218, 290, 439, 571, 741, 767, 866
MlyI GAGTC 1 cut(s) 824
MnlI CCTC 9 cut(s) 42, 121, 124, 285, 583, 633, 651, 1078, 1115
MroXI GAANNNNTTC 1 cut(s) 1223
MseI TTAA 5 cut(s) 405, 782, 882, 1092, 1152
MslI CAYNNNNRTG 2 cut(s) 434, 1046
MspCI CTTAAG 1 cut(s) 781
MspI CCGG 3 cut(s) 175, 617, 865
MspR9I CCNGG 3 cut(s) 176, 551, 866
MvaI CCWGG 1 cut(s) 551
MvnI CGCG 2 cut(s) 163, 704
MwoI GCNNNNNNNGC 3 cut(s) 269, 327, 962
NciI CCSGG 2 cut(s) 176, 866
NcoI CCATGG 1 cut(s) 273
NdeII GATC 3 cut(s) 400, 775, 1051
NlaIII CATG 7 cut(s) 28, 86, 200, 277, 962, 1117, 1242
NlaIV GGNNCC 3 cut(s) 180, 479, 621
NruI TCGCGA 1 cut(s) 704
NspI RCATGY 2 cut(s) 200, 1117
PciSI GCTCTTC 1 cut(s) 849
PdmI GAANNNNTTC 1 cut(s) 1223
PfeI GAWTC 2 cut(s) 426, 1339
Pfl23II CGTACG 1 cut(s) 99
PkrI GCNGC 1 cut(s) 1312
PleI GAGTC 1 cut(s) 823
PpsI GAGTC 1 cut(s) 823
PpuMI RGGWCCY 1 cut(s) 592
Psp5II RGGWCCY 1 cut(s) 592
Psp6I CCWGG 1 cut(s) 549
PspGI CCWGG 1 cut(s) 549
PspLI CGTACG 1 cut(s) 99
PspN4I GGNNCC 3 cut(s) 180, 479, 621
PspPI GGNCC 5 cut(s) 4, 77, 239, 592, 619
PspPPI RGGWCCY 1 cut(s) 592
PstI CTGCAG 1 cut(s) 1232
RruI TCGCGA 1 cut(s) 704
RsaI GTAC 7 cut(s) 101, 296, 555, 632, 843, 978, 1201
RsaNI GTAC 7 cut(s) 100, 295, 554, 631, 842, 977, 1200
RseI CAYNNNNRTG 2 cut(s) 434, 1046
SapI GCTCTTC 1 cut(s) 849
SaqAI TTAA 5 cut(s) 405, 782, 882, 1092, 1152
SatI GCNGC 1 cut(s) 1311
Sau3AI GATC 3 cut(s) 400, 775, 1051
Sau96I GGNCC 5 cut(s) 4, 77, 239, 592, 619
ScaI AGTACT 1 cut(s) 632
SchI GAGTC 1 cut(s) 824
ScrFI CCNGG 3 cut(s) 176, 551, 866
SexAI ACCWGGT 1 cut(s) 549
SfaNI GCATC 4 cut(s) 256, 430, 952, 1066
SfcI CTRYAG 4 cut(s) 234, 819, 966, 1228
SinI GGWCC 3 cut(s) 77, 592, 619
SmiMI CAYNNNNRTG 2 cut(s) 434, 1046
SmlI CTYRAG 2 cut(s) 587, 781
SmoI CTYRAG 2 cut(s) 587, 781
SsiI CCGC 3 cut(s) 869, 1079, 1156
SspI AATATT 1 cut(s) 669
SspMI CTAG 6 cut(s) 222, 434, 491, 626, 989, 1118
StyD4I CCNGG 3 cut(s) 174, 549, 864
StyI CCWWGG 3 cut(s) 221, 273, 1286
TaaI ACNGT 2 cut(s) 841, 918
TaiI ACGT 3 cut(s) 17, 105, 213
TaqI TCGA 5 cut(s) 20, 187, 316, 600, 1355
TatI WGTACW 2 cut(s) 630, 976
TfiI GAWTC 2 cut(s) 426, 1339
Tru1I TTAA 5 cut(s) 405, 782, 882, 1092, 1152
Tru9I TTAA 5 cut(s) 405, 782, 882, 1092, 1152
TscAI CASTG 2 cut(s) 249, 1015
TseI GCWGC 1 cut(s) 1310
TspDTI ATGAA 6 cut(s) 108, 429, 510, 571, 1200, 1290
TspGWI ACGGA 1 cut(s) 267
TspRI CASTG 2 cut(s) 249, 1015
Vha464I CTTAAG 1 cut(s) 781
VpaK11BI GGWCC 3 cut(s) 77, 592, 619
XbaI TCTAGA 1 cut(s) 625
XceI RCATGY 2 cut(s) 200, 1117
XmaJI CCTAGG 1 cut(s) 221
XmiI GTMKAC 2 cut(s) 213, 1212
XmnI GAANNNNTTC 1 cut(s) 1223
XspI CTAG 6 cut(s) 222, 434, 491, 626, 989, 1118
ZraI GACGTC 1 cut(s) 211
ZrmI AGTACT 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.