FvH4_2g29500

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000131
Physical Location & Seq
Forward (+)
22853941 .. 22856551
2611 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29500.t1

Sequence Viewer

Length: 1347 bp
ATGAAGGGAAGTATTGAAGCTGCTTCAAATGGCGCCAGAGAAAACCCGTACATTGTATTAGAAACTTCACTTCTGAAGGAGTTGGATAGACTGTCCCTCATGACCAATTCGCGCTGTATTCACCGGGTTTCTCCTCAACTACGGCTTGTATGTGAAAAGGCCTATACACCCCAGTTAGTCTCAGTTGGCCCCCTTCATCATGGAAAGCAAGCCTTGAAACGCATGGAAGAACACAAAATGAGGTACCTACGATATTTTCTGGGTCGAACCAATTTAAGCCTGATGCATTATATAGAAAAGATAAAGGATCAAGAAGCAGAACTGCGCAGTTGTTACTCACAGACCATTGAGCTTAAAAGCGATGAATTTGTGAAAATCATTCTAGTGGATGCCATCTTCATCATTGAGTTCTTGTTTAGAAGCTGGTATTCTCAATTGCTTGAAGAAAGTGACTGCCTCTTTGGATCACCAAGATTGGCAAATCATGTATGGCTCGACTTGCTGTTGCTTGAAAATCAGCTGCCATTCTTCATTCTTGAGGACCTATTCGATCCAGACATATTTCCATTTCCATCCAACTACTCTAACAGACTTGAAGGTGTTGAGAGCCTTTCAATGATATTTCTTTCTCATTACTTTCTGGATAAAGCCGGGGTATTTATAGGGGCAACGGGTATGGTACCCAATTTGGAAACAATATGTTGTTCCGAAGTAAAAGTGCAACATTTCGTTGATCTGTCAAGAAGGTTCTATGTAGCACCAATATTGAAACCAGAATCTACAAGACGACCCATAGCTTTAACTAAACCAAGTATTGAAGAGCTAAACCAGGCAGGAGTCCAATTCAAGGTGGGTCATTCCAGCAACAGCTTGTTTGACATAAAATTCAAAGGTGGGATTCTGGAAATTCCGAAACTGAGGGTACTGGGTTCAACAGAGGCTATACTTAGAAATTTAGTTGCATTTGAACAATGTAACTTTGCCTCTGGGCAGAGATACATAAGTGATTATATTGCCATGATGGATTATTTGGTAGACACCCCTAAAGATGTGGGATTGCTTGTTGAGTATGGAATTGTTGAAAGTGGGTTAGGAGGTGGCAATAATCAGTTATCTACTTTGATTAACTCCCTTGCTACTGGGGTTAATGTTAGCACAAAGAAATTCTATTATGGTACTATTTGTGAAGACTTGAACAAGTACTGCAGGTCACCATGGCACAGAAGGATTGCAAATTTGAGACAGAATTATTTCAACACACCTTGGGCAATTATTTCTTTCATTGCAGCAGTTTTTCTTCTCATACTCACTATCATTCAAACCATCTGCTCGATATTATCTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

449

Amino Acids

51.04

Weight (kDa)

6.8

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 40 - 436 1.1e-111 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000131)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31980 AT5G11290 AT5G11290
fragaria_vesca FvH4_2g29230 FvH4_2g29230 FvH4_2g29310 FvH4_2g29351 FvH4_2g29352 FvH4_2g29352 FvH4_2g29362 FvH4_2g29370 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29461 FvH4_2g29470 FvH4_2g29490 FvH4_2g29490 FvH4_2g29500 FvH4_2g29500 FvH4_2g29520 FvH4_2g33600 FvH4_3g29960 FvH4_5g20260 FvH4_7g25070
malus_domestica MD00G1144600.v1.1 MD07G1131600.v1.1 MD08G1146300.v1.1 MD08G1146400.v1.1 MD08G1146500.v1.1 MD08G1146600.v1.1 MD15G1035400.v1.1 MD15G1100600.v1.1 MD15G1100700.v1.1 MD15G1101400.v1.1 MD15G1101800.v1.1 MD15G1118600.v1.1 MD15G1119800.v1.1 MD15G1121700.v1.1 MD15G1121800.v1.1 MD15G1122100.v1.1 MD15G1122400.v1.1 MD15G1122700.v1.1 MD15G1123000.v1.1
prunus_persica Prupe.1G474700_v2.0.a1 Prupe.1G474800_v2.0.a1 Prupe.1G475000_v2.0.a1 Prupe.1G475600_v2.0.a1 Prupe.1G476100_v2.0.a1 Prupe.1G476400_v2.0.a1 Prupe.1G476600_v2.0.a1 Prupe.1G476900_v2.0.a1 Prupe.1G477100_v2.0.a1 Prupe.1G477300_v2.0.a1 Prupe.1G477500_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477600_v2.0.a1 Prupe.1G477700_v2.0.a1 Prupe.1G477900_v2.0.a1 Prupe.1G478000_v2.0.a1 Prupe.2G074000_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G095900_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096100_v2.0.a1 Prupe.7G096200_v2.0.a1 Prupe.7G096400_v2.0.a1 Prupe.8G015000_v2.0.a1
pyrus_communis pycom08g12340 pycom11g04600 pycom15g09280 pycom15g10770 pycom15g10790 pycom15g11000 pycom15g11040 pycom854g00030 pycom854g00050
rosa_chinensis RchiOBHm_Chr1g0321791 RchiOBHm_Chr3g0452021 RchiOBHm_Chr3g0452031 RchiOBHm_Chr3g0475821 RchiOBHm_Chr4g0410021 RchiOBHm_Chr4g0412191 RchiOBHm_Chr4g0415271 RchiOBHm_Chr6g0244001 RchiOBHm_Chr6g0252301 RchiOBHm_Chr6g0252341 RchiOBHm_Chr6g0267401 RchiOBHm_Chr6g0297251 RchiOBHm_Chr6g0298131 RchiOBHm_Chr6g0298141 RchiOBHm_Chr6g0298151 RchiOBHm_Chr6g0298161 RchiOBHm_Chr6g0298261 RchiOBHm_Chr6g0298271 RchiOBHm_Chr6g0298281 RchiOBHm_Chr6g0298291 RchiOBHm_Chr6g0298311 RchiOBHm_Chr6g0298321 RchiOBHm_Chr6g0298331 RchiOBHm_Chr6g0298341 RchiOBHm_Chr6g0298381 RchiOBHm_Chr6g0302351 RchiOBHm_Chr7g0203021 RchiOBHm_Chr7g0225421
rosa_laevigata RLG00000023811 RLG00000030588
rosa_multiflora Rmu_co8159872.1_g000001 Rmu_co8452635.1_g000001 Rmu_co8477209.1_g000001 Rmu_sc0000365.1_g000079 Rmu_sc0000461.1_g000042 Rmu_sc0000539.1_g000085 Rmu_sc0001358.1_g000006 Rmu_sc0001358.1_g000007 Rmu_sc0001673.1_g000024 Rmu_sc0002691.1_g000007 Rmu_sc0002724.1_g000011 Rmu_sc0003410.1_g000027 Rmu_sc0003420.1_g000007 Rmu_sc0003420.1_g000008 Rmu_sc0003420.1_g000009 Rmu_sc0003420.1_g000010 Rmu_sc0003551.1_g000014 Rmu_sc0004535.1_g000001 Rmu_sc0006252.1_g000006 Rmu_sc0006543.1_g000004 Rmu_sc0006711.1_g000015 Rmu_sc0007115.1_g000004 Rmu_sc0007115.1_g000011 Rmu_sc0007115.1_g000014 Rmu_sc0009317.1_g000003 Rmu_sc0009318.1_g000002 Rmu_sc0009318.1_g000003 Rmu_sc0010099.1_g000008 Rmu_sc0012041.1_g000004 Rmu_sc0013249.1_g000008 Rmu_sc0035583.1_g000001 Rmu_ssc0000004.1_g000024
rosa_roxburghii Rroxscaffold_1G00023390 Rroxscaffold_1G00024930 Rroxscaffold_3G00234420 Rroxscaffold_3G00234430 Rroxscaffold_5G00354530 Rroxscaffold_6G00405820 Rroxscaffold_6G00429190 Rroxscaffold_7G00165840 Rroxscaffold_7G00169700 Rroxscaffold_7G00169730 Rroxscaffold_7G00169740 Rroxscaffold_7G00169770 Rroxscaffold_7G00169780 Rroxscaffold_7G00169790 Rroxscaffold_7G00169800 Rroxscaffold_7G00170710 Rroxscaffold_7G00170720 Rroxscaffold_7G00185780 Rroxscaffold_7G00185800 Rroxscaffold_7G00201380 Rroxscaffold_7G00216170
rosa_rugosa Rorug03G0151700 Rorug03G0151700 Rorug05G0292700 Rorug05G0292800
rosa_samantha Rh1AG047000 Rh2BG283800 Rh2BG283900 Rh3BG041400 Rh3BG231700 Rh3DG227000 Rh4CG170100 Rh4CG170200 Rh4CG204700 Rh6AG020700 Rh6AG021000 Rh6AG381400 Rh6AG381500 Rh6AG389300 Rh6AG390400 Rh6AG390500 Rh6AG390600 Rh6AG390700 Rh6AG391200 Rh6AG391400 Rh7CG233300
rosa_wichuraiana Rw0G004890 Rw2G021490 Rw3G003000 Rw3G018320 Rw3G018340 Rw4G012210 Rw4G013140 Rw4G016490 Rw6G001700 Rw6G001720 Rw6G001730 Rw6G033220 Rw6G033230 Rw6G033990 Rw6G034080 Rw6G034090 Rw6G034100 Rw6G034110 Rw6G034140 Rw6G034180 Rw6G034190 Rw6G034200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 326
Acc36I ACCTGC 1 cut(s) 1197
Acc65I GGTACC 2 cut(s) 243, 679
AccB1I GGYRCC 3 cut(s) 32, 243, 679
AccI GTMKAC 1 cut(s) 1035
AccII CGCG 1 cut(s) 112
AclWI GGATC 3 cut(s) 315, 472, 545
AcsI RAATTY 6 cut(s) 365, 884, 906, 952, 1163, 1234
AcuI CTGAAG 1 cut(s) 95
AcyI GRCGYC 1 cut(s) 33
AfaI GTAC 6 cut(s) 50, 245, 681, 924, 1177, 1202
AfiI CCNNNNNNNGG 1 cut(s) 847
AjnI CCWGG 1 cut(s) 828
AluBI AGCT 7 cut(s) 20, 352, 423, 520, 797, 823, 870
AluI AGCT 7 cut(s) 20, 352, 423, 520, 797, 823, 870
Alw26I GTCTC 2 cut(s) 184, 1234
AlwI GGATC 3 cut(s) 315, 472, 545
AoxI GGCC 2 cut(s) 159, 187
ApeKI GCWGC 3 cut(s) 20, 520, 1286
ApoI RAATTY 6 cut(s) 365, 884, 906, 952, 1163, 1234
ArsI GACNNNNNNTTYG 2 cut(s) 443, 475
Asp700I GAANNNNTTC 1 cut(s) 1250
Asp718I GGTACC 2 cut(s) 243, 679
AspLEI GCGC 3 cut(s) 35, 114, 327
AspS9I GGNCC 2 cut(s) 188, 541
AsuC2I CCSGG 2 cut(s) 125, 652
AsuHPI GGTGA 3 cut(s) 113, 459, 1203
AvaII GGWCC 1 cut(s) 541
BaeI ACNNNNGTAYC 2 cut(s) 988, 1021
BanI GGYRCC 3 cut(s) 32, 243, 679
BbsI GAAGAC 1 cut(s) 1194
BbvI GCAGC 3 cut(s) 7, 507, 1298
BccI CCATC 4 cut(s) 401, 580, 1015, 1331
BceAI ACGGC 1 cut(s) 158
BciT130I CCWGG 1 cut(s) 830
BcnI CCSGG 2 cut(s) 125, 652
BcoDI GTCTC 2 cut(s) 184, 1234
BfaI CTAG 1 cut(s) 383
BfmI CTRYAG 1 cut(s) 1204
BfoI RGCGCY 1 cut(s) 36
BfuAI ACCTGC 1 cut(s) 1197
BisI GCNGC 3 cut(s) 21, 521, 1287
BlsI GCNGC 3 cut(s) 22, 522, 1288
BmcAI AGTACT 1 cut(s) 1202
Bme1390I CCNGG 3 cut(s) 125, 652, 830
Bme18I GGWCC 1 cut(s) 541
BmgT120I GGNCC 2 cut(s) 188, 541
BmiI GGNNCC 4 cut(s) 34, 190, 245, 681
BmrFI CCNGG 3 cut(s) 125, 652, 830
BmrI ACTGGG 3 cut(s) 166, 935, 1149
BmsI GCATC 2 cut(s) 273, 379
BmuI ACTGGG 3 cut(s) 166, 935, 1149
BpiI GAAGAC 1 cut(s) 1194
BpuEI CTTGAG 1 cut(s) 557
BpuMI CCSGG 2 cut(s) 125, 652
BsaHI GRCGYC 1 cut(s) 33
BsaJI CCNNGG 3 cut(s) 651, 1214, 1262
Bsc4I CCNNNNNNNGG 1 cut(s) 847
Bse1I ACTGG 3 cut(s) 172, 930, 1144
Bse3DI GCAATG 1 cut(s) 1281
BseBI CCWGG 1 cut(s) 830
BseDI CCNNGG 3 cut(s) 651, 1214, 1262
BseGI GGATG 2 cut(s) 394, 572
BseLI CCNNNNNNNGG 1 cut(s) 847
BseMI GCAATG 1 cut(s) 1281
BseMII CTCAG 2 cut(s) 195, 908
BseNI ACTGG 3 cut(s) 172, 930, 1144
BseRI GAGGAG 1 cut(s) 123
BseXI GCAGC 3 cut(s) 7, 507, 1298
Bsh1236I CGCG 1 cut(s) 112
BshFI GGCC 2 cut(s) 161, 189
BshNI GGYRCC 3 cut(s) 32, 243, 679
BsiSI CCGG 2 cut(s) 124, 651
BslFI GGGAC 1 cut(s) 79
BslI CCNNNNNNNGG 1 cut(s) 847
BsmAI GTCTC 2 cut(s) 184, 1234
BsmFI GGGAC 1 cut(s) 79
BsnI GGCC 2 cut(s) 161, 189
Bsp143I GATC 4 cut(s) 307, 464, 550, 733
Bsp19I CCATGG 1 cut(s) 1214
BspANI GGCC 2 cut(s) 161, 189
BspCNI CTCAG 2 cut(s) 194, 909
BspFNI CGCG 1 cut(s) 112
BspHI TCATGA 1 cut(s) 99
BspLI GGNNCC 4 cut(s) 34, 190, 245, 681
BspMAI CTGCAG 1 cut(s) 1208
BspMI ACCTGC 1 cut(s) 1197
BspPI GGATC 3 cut(s) 315, 472, 545
BspQI GCTCTTC 1 cut(s) 813
BspT107I GGYRCC 3 cut(s) 32, 243, 679
BsrDI GCAATG 1 cut(s) 1281
BsrI ACTGG 3 cut(s) 172, 930, 1144
BssECI CCNNGG 3 cut(s) 651, 1214, 1262
BssMI GATC 4 cut(s) 307, 464, 550, 733
BssNI GRCGYC 1 cut(s) 33
BssT1I CCWWGG 2 cut(s) 1214, 1262
Bst2UI CCWGG 1 cut(s) 830
Bst4CI ACNGT 1 cut(s) 93
Bst6I CTCTTC 1 cut(s) 813
BstACI GRCGYC 1 cut(s) 33
BstC8I GCNNGC 1 cut(s) 210
BstDEI CTNAG 3 cut(s) 181, 917, 947
BstDSI CCRYGG 1 cut(s) 1214
BstEII GGTNACC 1 cut(s) 1209
BstF5I GGATG 2 cut(s) 394, 572
BstFNI CGCG 1 cut(s) 112
BstH2I RGCGCY 1 cut(s) 36
BstHHI GCGC 3 cut(s) 35, 114, 327
BstKTI GATC 4 cut(s) 310, 467, 553, 736
BstMAI GTCTC 2 cut(s) 184, 1234
BstMBI GATC 4 cut(s) 307, 464, 550, 733
BstMWI GCNNNNNNNGC 1 cut(s) 499
BstNI CCWGG 1 cut(s) 830
BstPI GGTNACC 1 cut(s) 1209
BstSCI CCNGG 3 cut(s) 123, 650, 828
BstSFI CTRYAG 1 cut(s) 1204
BstUI CGCG 1 cut(s) 112
BstV1I GCAGC 3 cut(s) 7, 507, 1298
BstV2I GAAGAC 1 cut(s) 1194
BsuRI GGCC 2 cut(s) 161, 189
BtgI CCRYGG 1 cut(s) 1214
BtgZI GCGATG 1 cut(s) 375
BtsCI GGATG 2 cut(s) 394, 572
BveI ACCTGC 1 cut(s) 1197
Cac8I GCNNGC 1 cut(s) 210
CciI TCATGA 1 cut(s) 99
CfoI GCGC 3 cut(s) 35, 114, 327
Cfr13I GGNCC 2 cut(s) 188, 541
Csp6I GTAC 6 cut(s) 49, 244, 680, 923, 1176, 1201
CviAII CATG 6 cut(s) 100, 200, 223, 485, 1018, 1215
CviQI GTAC 6 cut(s) 49, 244, 680, 923, 1176, 1201
DdeI CTNAG 3 cut(s) 181, 917, 947
DinI GGCGCC 1 cut(s) 34
DpnI GATC 4 cut(s) 309, 466, 552, 735
DpnII GATC 4 cut(s) 307, 464, 550, 733
Eam1104I CTCTTC 1 cut(s) 813
EarI CTCTTC 1 cut(s) 813
Eco130I CCWWGG 2 cut(s) 1214, 1262
Eco147I AGGCCT 1 cut(s) 161
Eco47I GGWCC 1 cut(s) 541
Eco57I CTGAAG 1 cut(s) 95
Eco91I GGTNACC 1 cut(s) 1209
EcoO109I RGGNCCY 1 cut(s) 541
EcoO65I GGTNACC 1 cut(s) 1209
EcoRII CCWGG 1 cut(s) 828
EcoT14I CCWWGG 2 cut(s) 1214, 1262
EcoT22I ATGCAT 1 cut(s) 288
EgeI GGCGCC 1 cut(s) 34
EheI GGCGCC 1 cut(s) 34
ErhI CCWWGG 2 cut(s) 1214, 1262
FaeI CATG 6 cut(s) 103, 203, 226, 488, 1021, 1218
FalI AAGNNNNNCTT 2 cut(s) 197, 229
FaqI GGGAC 1 cut(s) 79
FatI CATG 6 cut(s) 99, 199, 222, 484, 1017, 1214
FblI GTMKAC 1 cut(s) 1035
Fnu4HI GCNGC 3 cut(s) 21, 521, 1287
FokI GGATG 2 cut(s) 401, 559
Fsp4HI GCNGC 3 cut(s) 21, 521, 1287
FspBI CTAG 1 cut(s) 383
FspI TGCGCA 1 cut(s) 326
GlaI GCGC 3 cut(s) 34, 113, 326
GluI GCNGC 3 cut(s) 21, 521, 1287
HaeII RGCGCY 1 cut(s) 36
HaeIII GGCC 2 cut(s) 161, 189
HapII CCGG 2 cut(s) 124, 651
HhaI GCGC 3 cut(s) 35, 114, 327
Hin1I GRCGYC 1 cut(s) 33
Hin1II CATG 6 cut(s) 103, 203, 226, 488, 1021, 1218
Hin6I GCGC 3 cut(s) 33, 112, 325
HinP1I GCGC 3 cut(s) 33, 112, 325
HinfI GANTC 3 cut(s) 776, 837, 898
HpaII CCGG 2 cut(s) 124, 651
HphI GGTGA 3 cut(s) 113, 459, 1203
Hpy166II GTNNAC 1 cut(s) 1036
Hpy188I TCNGA 3 cut(s) 75, 709, 912
Hpy188III TCNNGA 7 cut(s) 100, 311, 536, 554, 641, 741, 902
Hpy8I GTNNAC 1 cut(s) 1036
HpyAV CCTTC 5 cut(s) 70, 203, 590, 738, 1218
HpyCH4III ACNGT 1 cut(s) 93
HpyCH4V TGCA 6 cut(s) 286, 721, 962, 1206, 1232, 1286
HpyF10VI GCNNNNNNNGC 1 cut(s) 499
HpyF3I CTNAG 3 cut(s) 181, 917, 947
Hsp92I GRCGYC 1 cut(s) 33
Hsp92II CATG 6 cut(s) 103, 203, 226, 488, 1021, 1218
HspAI GCGC 3 cut(s) 33, 112, 325
KasI GGCGCC 1 cut(s) 32
KpnI GGTACC 2 cut(s) 247, 683
Kzo9I GATC 4 cut(s) 307, 464, 550, 733
LguI GCTCTTC 1 cut(s) 813
Lsp1109I GCAGC 3 cut(s) 7, 507, 1298
LweI GCATC 2 cut(s) 273, 379
MaeI CTAG 1 cut(s) 383
MaeIII GTNAC 4 cut(s) 332, 449, 974, 1209
MalI GATC 4 cut(s) 309, 466, 552, 735
MboI GATC 4 cut(s) 307, 464, 550, 733
MboII GAAGA 7 cut(s) 239, 388, 455, 520, 830, 1199, 1289
MfeI CAATTG 1 cut(s) 434
Mly113I GGCGCC 1 cut(s) 33
MlyI GAGTC 1 cut(s) 846
MmeI TCCRAC 2 cut(s) 63, 600
MnlI CCTC 9 cut(s) 107, 144, 234, 467, 532, 912, 931, 994, 1088
Mph1103I ATGCAT 1 cut(s) 288
MroXI GAANNNNTTC 1 cut(s) 1250
MseI TTAA 5 cut(s) 275, 354, 800, 1125, 1146
MslI CAYNNNNRTG 1 cut(s) 383
MspA1I CMGCKG 1 cut(s) 520
MspI CCGG 2 cut(s) 124, 651
MspR9I CCNGG 3 cut(s) 125, 652, 830
MunI CAATTG 1 cut(s) 434
MvaI CCWGG 1 cut(s) 830
MvnI CGCG 1 cut(s) 112
MwoI GCNNNNNNNGC 1 cut(s) 499
NarI GGCGCC 1 cut(s) 33
NciI CCSGG 2 cut(s) 125, 652
NcoI CCATGG 1 cut(s) 1214
NdeII GATC 4 cut(s) 307, 464, 550, 733
NlaIII CATG 6 cut(s) 103, 203, 226, 488, 1021, 1218
NlaIV GGNNCC 4 cut(s) 34, 190, 245, 681
NmuCI GTSAC 2 cut(s) 449, 1209
NsbI TGCGCA 1 cut(s) 326
NsiI ATGCAT 1 cut(s) 288
PagI TCATGA 1 cut(s) 99
PceI AGGCCT 1 cut(s) 161
PciSI GCTCTTC 1 cut(s) 813
PdmI GAANNNNTTC 1 cut(s) 1250
PfeI GAWTC 2 cut(s) 776, 898
PkrI GCNGC 3 cut(s) 22, 522, 1288
PleI GAGTC 1 cut(s) 845
PluTI GGCGCC 1 cut(s) 36
PpsI GAGTC 1 cut(s) 845
PpuMI RGGWCCY 1 cut(s) 541
Psp5II RGGWCCY 1 cut(s) 541
Psp6I CCWGG 1 cut(s) 828
PspEI GGTNACC 1 cut(s) 1209
PspGI CCWGG 1 cut(s) 828
PspN4I GGNNCC 4 cut(s) 34, 190, 245, 681
PspPI GGNCC 2 cut(s) 188, 541
PspPPI RGGWCCY 1 cut(s) 541
PstI CTGCAG 1 cut(s) 1208
PvuII CAGCTG 1 cut(s) 520
RsaI GTAC 6 cut(s) 50, 245, 681, 924, 1177, 1202
RsaNI GTAC 6 cut(s) 49, 244, 680, 923, 1176, 1201
RseI CAYNNNNRTG 1 cut(s) 383
SapI GCTCTTC 1 cut(s) 813
SaqAI TTAA 5 cut(s) 275, 354, 800, 1125, 1146
SatI GCNGC 3 cut(s) 21, 521, 1287
Sau3AI GATC 4 cut(s) 307, 464, 550, 733
Sau96I GGNCC 2 cut(s) 188, 541
ScaI AGTACT 1 cut(s) 1202
SchI GAGTC 1 cut(s) 846
ScrFI CCNGG 3 cut(s) 125, 652, 830
SfaNI GCATC 2 cut(s) 273, 379
SfcI CTRYAG 1 cut(s) 1204
SfoI GGCGCC 1 cut(s) 34
SinI GGWCC 1 cut(s) 541
SmiMI CAYNNNNRTG 1 cut(s) 383
SmlI CTYRAG 1 cut(s) 536
SmoI CTYRAG 1 cut(s) 536
SseBI AGGCCT 1 cut(s) 161
SspDI GGCGCC 1 cut(s) 32
SspI AATATT 1 cut(s) 765
SspMI CTAG 1 cut(s) 383
StuI AGGCCT 1 cut(s) 161
StyD4I CCNGG 3 cut(s) 123, 650, 828
StyI CCWWGG 2 cut(s) 1214, 1262
TaaI ACNGT 1 cut(s) 93
TaqI TCGA 4 cut(s) 265, 495, 549, 1331
TatI WGTACW 1 cut(s) 1200
TfiI GAWTC 2 cut(s) 776, 898
Tru1I TTAA 5 cut(s) 275, 354, 800, 1125, 1146
Tru9I TTAA 5 cut(s) 275, 354, 800, 1125, 1146
TseFI GTSAC 2 cut(s) 449, 1209
TseI GCWGC 3 cut(s) 20, 520, 1286
Tsp45I GTSAC 2 cut(s) 449, 1209
TspDTI ATGAA 6 cut(s) 17, 185, 378, 388, 520, 1270
VpaK11BI GGWCC 1 cut(s) 541
XapI RAATTY 6 cut(s) 365, 884, 906, 952, 1163, 1234
XmiI GTMKAC 1 cut(s) 1035
XmnI GAANNNNTTC 1 cut(s) 1250
XspI CTAG 1 cut(s) 383
ZrmI AGTACT 1 cut(s) 1202
Zsp2I ATGCAT 1 cut(s) 288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.